# RGD-PIPELINE: ftp-file-extracts # MODULE: chinchilla-genes-version-2023-03-10 # GENERATED-ON: 2026/08/01 # PURPOSE: information about active chinchilla genes extracted from RGD database # CONTACT: rgd.data@mcw.edu # FORMAT: tab delimited text # NOTES: multiple values in a single column are separated by ';' # #COLUMN INFORMATION: #1 GENE_RGD_ID RGD_ID of the gene #2 GENE_TYPE gene type #3 SYMBOL official gene symbol #4 NAME gene name #5 GENE_DESC gene description (if available) #6 CONTIG contig acc id #7 START_POS start position within contig #8 STOP_POS stop position within contig #9 STRAND strand information #10 NCBI_GENE_ID NCBI Gene ID #11 GENBANK_NUCLEOTIDE GenBank Nucleotide ID(s) #12 GENBANK_PROTEIN GenBank Protein ID(s) #13 GENE_REFSEQ_STATUS gene RefSeq Status (from NCBI) 8829520 protein-coding Pgap6 post-GPI attachment to proteins 6 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN lysosomal membrane (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955442 16821275 16830275 + 102028905 AGCD01037917;GBCE01115676;GBDK01128164;XM_013517743 XP_013373197 MODEL 9046475 pseudo LOC102003959 ESF1 homolog pseudogene NW_004955413 20383463 20386134 - 102003959 AGCD01014215 MODEL 8816792 protein-coding Rbm12b RNA binding motif protein 12B ASSOCIATED WITH myoepithelioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955417 10067672 10097381 - 102019913 AGCD01018065;AGCD01018066;GBDF01211556;XM_005381790;XM_005381796;XM_013512761;XM_013512762;XM_013512763;XM_013512764;XM_013512765;XM_013512766;XM_013512768;XM_013512769;XM_013512770;XM_013512771;XR_001233430;XR_001233431;XR_001233432 XP_005381847;XP_005381853;XP_013368215;XP_013368216;XP_013368217;XP_013368218;XP_013368219;XP_013368220;XP_013368222;XP_013368223;XP_013368224;XP_013368225 MODEL 8859989 protein-coding Slc27a6 solute carrier family 27 member 6 ENCODES a protein that exhibits very long-chain fatty acid-CoA ligase activity (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955415 1973308 2041800 + 102007331 AGCD01015887;AGCD01015888;AGCD01015889;AGCD01015890;AGCD01015891;GBDF01251048;XM_005380551;XM_005380552 XP_005380608;XP_005380609 MODEL 8999932 protein-coding Trim69 tripartite motif containing 69 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of cGAS/STING signaling pathway (ortholog); protein K63-linked ubiquitination (ortholog); protein localization to centrosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); multisystem inflammatory syndrome in children (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955409 8376449 8394651 - 102024980 AGCD01009402;AGCD01009403;AGCD01009404;AGCD01009405;AGCD01009406;GBDF01053402;XM_005376746 XP_005376803 MODEL 10114815 ncrna LOC106150304 uncharacterized LOC106150304 NW_004955470 1582960 1586805 - 106150304 AGCD01052648;XR_001237040 MODEL 8913371 ncrna LOC102011553 uncharacterized LOC102011553 NW_004955421 24665699 24694762 - 102011553 AGCD01022221;GBDF01076912;XR_260823 MODEL 9043808 ncrna LOC102009955 uncharacterized LOC102009955 NW_004955490 5851097 5894388 + 102009955 AGCD01060211;GBDK01242204;XR_001231206;XR_001231207;XR_264028 MODEL 8846430 pseudo LOC102010757 28S ribosomal protein S36, mitochondrial pseudogene NW_004955402 51239421 51239728 - 102010757 AGCD01001297 MODEL 8774151 ncrna LOC102022255 uncharacterized LOC102022255 NW_004955407 5191570 5305248 + 102022255 AGCD01006907;AGCD01006908;AGCD01006909;GBDF01224208;XR_259550 MODEL 8833975 protein-coding Ripply3 ripply transcriptional repressor 3 INVOLVED IN heart development (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog) NW_004955407 36101206 36108808 + 102018471 AGCD01007757;AGCD01007758;GBBH01010607;GBDK01324835;XM_013504657 XP_013360111 MODEL 39131712 snorna SNORA71 Small nucleolar RNA SNORA71 8843085 protein-coding LOC102011127 zinc finger protein 852 NW_004955420 26958234 26960564 + 102011127 AGCD01021441;XM_013513349 XP_013368803 MODEL 39132979 snrna U1 U1 spliceosomal RNA 730469137 snorna SNORA11 Small nucleolar RNA SNORA11 8857389 protein-coding Sdk2 sidekick cell adhesion molecule 2 INVOLVED IN camera-type eye photoreceptor cell differentiation (ortholog); homophilic cell-cell adhesion (ortholog); retina layer formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN synapse (ortholog) NW_004955553 353190 614806 - 102003494 AGCD01072855;AGCD01072856;AGCD01072857;AGCD01072858;AGCD01072859;AGCD01072860;GBDJ01299393;GBDK01096005;XM_013508659 XP_013364113 MODEL 8913267 protein-coding LOC102005406 uncharacterized LOC102005406 NW_004955514 858595 900031 - 102005406 AGCD01067024;AGCD01067025;GBBH01100117;XM_013506745 XP_013362199 MODEL 39132075 snorna SNORD24 Small nucleolar RNA SNORD24 8803654 protein-coding LOC102016211 potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like NW_004955581 335182 336350 - 102016211 AGCD01075667;XM_013509744 XP_013365198 MODEL 8996456 protein-coding Snrnp27 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 ASSOCIATED WITH atrial fibrillation (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN precatalytic spliceosome (ortholog); spliceosomal complex (ortholog); U4/U6 x U5 tri-snRNP complex (ortholog) NW_004955424 15243190 15251831 - 102013100 AGCD01024700;GBDF01118203;XM_005385637;XM_013514749;XM_013514750;XR_001234249;XR_001234250 XP_005385694;XP_013370203;XP_013370204 MODEL 8838901 pseudo LOC102008040 very-long-chain 3-oxoacyl-CoA reductase pseudogene NW_004955572 223774 282157 + 102008040 AGCD01074901;AGCD01074902;AGCD01074903;AGCD01074904;AGCD01074905;AGCD01074906 MODEL 8777237 protein-coding Prcd photoreceptor disc component ENCODES a protein that exhibits opsin binding (ortholog); INVOLVED IN detection of light stimulus involved in visual perception (ortholog); microglial cell migration (ortholog); neural retina development (ortholog); ASSOCIATED WITH retinitis pigmentosa 36 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955506 5751963 5764767 - 102022411 AGCD01065386;GBDF01214040;XM_005407426;XM_013506079;XM_013506080 XP_005407483;XP_013361533;XP_013361534 MODEL 8991425 protein-coding Ptbp3 polypyrimidine tract binding protein 3 INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); negative regulation of RNA splicing (ortholog); regulation of cell differentiation (ortholog) NW_004955419 15002780 15101588 + 102005474 AGCD01020055;AGCD01020056;AGCD01020057;GBDF01088480;GBDF01088481;XM_013513256;XM_013513257;XM_013513258;XM_013513259 XP_013368710;XP_013368711;XP_013368712;XP_013368713 MODEL 8895333 pseudo LOC102008806 28S ribosomal protein S36, mitochondrial pseudogene NW_004955451 2025250 2026677 + 102008806 AGCD01043004;XM_005393966 MODEL 8938375 protein-coding Rnf40 ring finger protein 40 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); protein homodimerization activity (ortholog); syntaxin-1 binding (ortholog); INVOLVED IN positive regulation of proteasomal protein catabolic process (ortholog); positive regulation of protein polyubiquitination (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN BRE1 E3 ubiquitin ligase complex (ortholog); HULC complex (ortholog); nucleoplasm (ortholog) NW_004955493 7627189 7640711 + 102020349 AGCD01061206;GBDF01046729;XM_005405275 XP_005405332 MODEL 8729475 protein-coding Prr15l proline rich 15 like ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955451 13180880 13182035 + 102010857 AGCD01043458;GBBH01032907;GBDI01064474;XM_013519364 XP_013374818 MODEL 8829052 protein-coding Lmtk3 lemur tail kinase 3 ENCODES a protein that exhibits protein serine kinase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); epilepsy (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955559 1994851 2011578 + 102021716 AGCD01073685;AGCD01073686;GBBH01192666;XM_013508949 XP_013364403 MODEL 8917387 pseudo LOC102005781 putative 40S ribosomal protein S26-like 1 NW_004955462 251999 253115 + 102005781 AGCD01049074 MODEL 8896656 ncrna LOC102019357 uncharacterized LOC102019357 NW_004955454 7197852 7234878 - 102019357 AGCD01045286;AGCD01045287;AGCD01045288;AGCD01045289;AGCD01045290;GBDF01123367;XR_001236239;XR_001236240;XR_001236241;XR_262780 MODEL 8717283 protein-coding LOC102013146 gametocyte-specific factor 1-like NW_004955458 1718253 1730596 - 102013146 AGCD01047201;AGCD01047202;GBBH01224139;XM_013520795 XP_013376249 MODEL 8701648 protein-coding Rfc3 replication factor C subunit 3 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); DNA binding (ortholog); DNA clamp loader activity (ortholog); INVOLVED IN DNA replication (ortholog); DNA-templated DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog); nucleoplasm (ortholog) NW_004955431 12071465 12084570 - 102007456 AGCD01030254;GBCB01075231;XM_005387702 XP_005387759 MODEL 8784098 protein-coding LOC102004707 putative spermatogenesis-associated protein 31D3 NW_004955417 24627190 24630152 + 102004707 AGCD01018467;GBDF01006014;XM_005381905 XP_005381962 MODEL 730469067 snorna SNORA27 Small nucleolar RNA SNORA27 39133283 snrna U4 U4 spliceosomal RNA 9023168 protein-coding Spry4 sprouty RTK signaling antagonist 4 ENCODES a protein that exhibits protein kinase inhibitor activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of substrate adhesion-dependent cell spreading (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); disorder of sexual development (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955415 11489439 11504247 + 102027401 AGCD01016163;GBBH01086221;XM_005380708;XM_005380709 XP_005380765;XP_005380766 MODEL 8779551 protein-coding Pno1 partner of NOB1 homolog INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955424 16697109 16705963 - 102023494 AGCD01024748;GBDI01227497;XM_005385673 XP_005385730 MODEL 8863916 ncrna LOC102008419 uncharacterized LOC102008419 NW_004955420 12338859 12346661 + 102008419 AGCD01020861;GBDF01156176;XR_001233788;XR_001233789;XR_260709 MODEL 8707537 protein-coding Bspry B-box and SPRY domain containing INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); stomach cancer (ortholog); FOUND IN cell leading edge (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955419 14124167 14139181 - 102027074 AGCD01020012;GBCE01170004;GBDI01012219;XM_013513135 XP_013368589 MODEL 9034303 protein-coding Ppcdc phosphopantothenoylcysteine decarboxylase ENCODES a protein that exhibits FMN binding (ortholog); identical protein binding (ortholog); phosphopantothenoylcysteine decarboxylase activity (ortholog); INVOLVED IN coenzyme A biosynthetic process (ortholog); PARTICIPATES IN pantothenic acid metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN phosphopantothenoylcysteine decarboxylase complex (ortholog) NW_004955450 2971874 2985034 - 102003923 AGCD01042416;GBDF01014837;XM_005393522;XM_005393523;XM_005393524;XM_013518850;XM_013518851;XM_013518852;XM_013518853;XM_013518854;XM_013518855;XR_001235857;XR_262523 XP_005393579;XP_005393580;XP_005393581;XP_013374304;XP_013374305;XP_013374306;XP_013374307;XP_013374308;XP_013374309 MODEL 8781205 ncrna LOC102006132 uncharacterized LOC102006132 NW_004955419 22988158 23031113 - 102006132 AGCD01020311;GBDF01280732;XR_260655 MODEL 9060687 protein-coding Thoc3 THO complex 3 INVOLVED IN mRNA export from nucleus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); THO complex part of transcription export complex (ortholog) NW_004955408 28467540 28480613 - 102008381 AGCD01008713;GBDK01394321;XM_005376367 XP_005376424 MODEL 8911810 protein-coding Pigw phosphatidylinositol glycan anchor biosynthesis class W ENCODES a protein that exhibits glucosaminyl-phosphatidylinositol O-acyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH hyperphosphatasia with impaired intellectual development syndrome (ortholog); hyperphosphatasia with impaired intellectual development syndrome 5 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955451 1388474 1391671 - 102004224 AGCD01042967;GBBH01077894;XM_005393950;XM_005393951;XM_013519338 XP_005394007;XP_005394008;XP_013374792 MODEL 8878534 ncrna LOC102007252 uncharacterized LOC102007252 NW_004955427 4321562 4338950 + 102007252 AGCD01026962;GBDF01219849;XR_001234341;XR_001234342;XR_261230 MODEL 8741063 protein-coding Vwa2 von Willebrand factor A domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN calcium-independent cell-matrix adhesion (ortholog); regulation of insulin receptor signaling pathway (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN basement membrane (ortholog); extracellular region (ortholog) NW_004955431 19224373 19274475 + 102016083 AGCD01030445;AGCD01030446;AGCD01030447;GBDI01115147;XM_005387824;XM_005387825;XM_013515834 XP_005387881;XP_005387882;XP_013371288 MODEL 8724761 pseudo LOC102011964 40S ribosomal protein S3a pseudogene NW_004955410 19855730 19856950 - 102011964 AGCD01011031 MODEL 9037256 protein-coding Rad51 RAD51 recombinase ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); chromatin binding (ortholog); INVOLVED IN cellular response to alkaloid (ortholog); cellular response to camptothecin (ortholog); cellular response to cisplatin (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); Brachydactyly, Type E (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955416 7566715 7590628 + 102024794 AGCD01016991;AGCD01016992;AGCD01016993;AGCD01016994;GBDF01087352;XM_005381253 XP_005381310 MODEL 10107287 ncrna LOC106147405 uncharacterized LOC106147405 NW_004955555 151349 167717 - 106147405 AGCD01073024;GBCE01125336;XR_001232301 MODEL 8794251 ncrna LOC102019733 uncharacterized LOC102019733 NW_004955437 13881006 13883816 + 102019733 AGCD01034665;GBDF01112877;XR_261880 MODEL 730469209 snorna SNORA43 Small nucleolar RNA SNORA43 9012636 protein-coding Serpinf2 serpin family F member 2 ENCODES a protein that exhibits endopeptidase inhibitor activity (ortholog); protease binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); collagen fibril organization (ortholog); maintenance of blood vessel diameter homeostasis by renin-angiotensin (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); alpha-2-plasmin inhibitor deficiency (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); fibrinogen complex (ortholog) NW_004955481 1441262 1449078 - 102016267 AGCD01056832;GBCQ01033980;XM_005402606;XM_005402607 XP_005402663;XP_005402664 MODEL 8867228 protein-coding Rps20 ribosomal protein S20 ENCODES a protein that exhibits MDM2/MDM4 family protein binding (ortholog); structural constituent of ribosome (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN positive regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH asthma (ortholog); cervical cancer (ortholog); Colorectal Cancer 10 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955454 15151065 15152301 - 102011276 AGCD01045486;GBCC01000215;XM_005396079 XP_005396136 MODEL 8767826 protein-coding Spag1 sperm associated antigen 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant nocturnal frontal lobe epilepsy 5 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); protein folding chaperone complex (ortholog) NW_004955417 15417604 15482650 + 102017235 AGCD01018232;AGCD01018233;AGCD01018234;GBBH01219310;GBCE01023932;XM_013512759;XM_013512760 XP_013368213;XP_013368214 MODEL 8756901 protein-coding Tpbg trophoblast glycoprotein INVOLVED IN cell chemotaxis (ortholog); dendrite arborization (ortholog); mesenchymal cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955411 10203144 10206711 + 102015182 AGCD01011775;AGCD01011776;GBBH01076595;XM_013510911 XP_013366365 MODEL 8699537 protein-coding Entrep1 endosomal transmembrane epsin interactor 1 ENCODES a protein that exhibits ubiquitin ligase activator activity (ortholog); INVOLVED IN CXCL12-activated CXCR4 signaling pathway (ortholog); negative adaptation of signaling pathway (ortholog); receptor internalization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN early endosome membrane (ortholog); late endosome membrane (ortholog); plasma membrane (ortholog) NW_004955434 3615284 3704014 - 102004633 AGCD01032137;AGCD01032138;AGCD01032139;AGCD01032140;AGCD01032141;GBBH01142742;GBCB01007711;XM_005388562 XP_005388619 MODEL 8824995 protein-coding Plcd3 phospholipase C delta 3 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN angiogenesis (ortholog); labyrinthine layer blood vessel development (ortholog); regulation of cell population proliferation (ortholog); PARTICIPATES IN inositol metabolic pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955451 17822345 17827848 - 102023864 AGCD01043774;GBBH01230083;GBCE01115432;XM_005394564 XP_005394621 MODEL 8865912 protein-coding LOC102018145 cytochrome P450 4V2 INVOLVED IN fatty acid omega-oxidation (ortholog); ASSOCIATED WITH Bietti crystalline corneoretinal dystrophy (ortholog); cervical cancer (ortholog); corneal dystrophy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955403 22870299 22912221 - 102018145 AGCD01002231;AGCD01002232;AGCD01002233;GBCE01187980;GBDK01126781;XM_005373433 XP_005373490 MODEL 8980172 protein-coding Rbm15 RNA binding motif protein 15 ENCODES a protein that exhibits mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN branching involved in blood vessel morphogenesis (ortholog); dosage compensation by inactivation of X chromosome (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); neuroblastoma (ortholog); FOUND IN nuclear envelope (ortholog); nuclear membrane (ortholog); nuclear speck (ortholog) NW_004955435 13846297 13854639 + 102018321 AGCD01033212;GBDF01234226;XM_005388923 XP_005388980 MODEL 9038028 protein-coding LOC102003961 olfactory receptor 51I1-like NW_004955414 20943623 20944567 + 102003961 AGCD01015396;XM_005380488 XP_005380545 MODEL 8872421 ncrna LOC102022258 uncharacterized LOC102022258 NW_004955408 13753010 13780114 - 102022258 AGCD01008372;AGCD01008373;GBDF01195156;XR_259682 MODEL 9016569 protein-coding Pgbd1 piggyBac transposable element derived 1 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN neurogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955465 13641462 13656466 + 102012077 AGCD01050614;AGCD01050615;GBCE01032028;XM_005398967;XM_005398968;XM_013521783 XP_005399024;XP_005399025;XP_013377237 MODEL 730469210 snorna SNORA43 Small nucleolar RNA SNORA43 10108223 ncrna LOC106150305 uncharacterized LOC106150305 NW_004955471 3519810 3623215 + 106150305 AGCD01053057;GBBH01055384;XR_001237041 MODEL 39131708 snorna SNORA71 Small nucleolar RNA SNORA71 39132981 snrna U1 U1 spliceosomal RNA 730469037 snorna SNORA11 Small nucleolar RNA SNORA11 8834490 protein-coding LOC102011130 chromosome unknown open reading frame, human C20orf173 ASSOCIATED WITH esophageal cancer (ortholog) NW_004955422 25895181 25897125 + 102011130 AGCD01023269;AGCD01023270;GBDF01017778;XM_005384792 XP_005384849 MODEL 39132080 snorna SNORD24 Small nucleolar RNA SNORD24 9050250 protein-coding Trim7 tripartite motif containing 7 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleus (ortholog) NW_004955530 119088 128353 + 102003481 AGCD01069830;GBDK01397066;XM_005410097;XM_005410098 XP_005410154;XP_005410155 MODEL 8737230 protein-coding LOC102011555 probable inactive serine protease 58 NW_004955494 1266343 1273436 + 102011555 AGCD01061393;GBDF01081972;XM_005405395;XM_013504926 XP_005405452;XP_013360380 MODEL 9058739 protein-coding LOC102018147 ectonucleoside triphosphate diphosphohydrolase 6-like NW_004955847 889 15804 - 102018147 AGCD01078483;GBCE01185994;GBCE01186006;XM_005415131;XM_005415132;XM_005415133;XM_005415134;XM_013510199 XP_005415188;XP_005415189;XP_005415190;XP_005415191;XP_013365653 MODEL 9030452 protein-coding Rit1 Ras like without CAAX 1 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN Ras protein signal transduction (ortholog); ASSOCIATED WITH atrial heart septal defect (ortholog); Biventricular Hypertrophy (ortholog); cardiofaciocutaneous syndrome (ortholog); FOUND IN plasma membrane (ortholog) NW_004955545 2089530 2099404 - 102011362 AGCD01071884;GBDK01092159;XM_005411618;XM_005411619;XM_005411622 XP_005411675;XP_005411676;XP_005411679 MODEL 9056018 protein-coding Prcp prolylcarboxypeptidase ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); angiotensin maturation (ortholog); energy homeostasis (ortholog); PARTICIPATES IN kallikrein-kinin cascade pathway; ASSOCIATED WITH brain infarction (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN basal part of cell (ortholog); extracellular region (ortholog); lysosome (ortholog) NW_004955414 9631223 9700537 + 102029731 AGCD01015031;GBDJ01083554;XM_005379809 XP_005379866 MODEL 8926018 protein-coding Rnf41 ring finger protein 41 ENCODES a protein that exhibits erythropoietin receptor binding (ortholog); identical protein binding (ortholog); interleukin-3 receptor binding (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway (ortholog); negative regulation of cell migration (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); congenital heart disease (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum tubular network (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955458 3799450 3833269 - 102004143 AGCD01047347;AGCD01047348;AGCD01047349;AGCD01047350;GBCQ01067173;XM_005397293;XM_005397294;XM_005397296;XM_013520826;XM_013520827;XM_013520828;XM_013520829 XP_005397350;XP_005397351;XP_005397353;XP_013376280;XP_013376281;XP_013376282;XP_013376283 MODEL 8911504 pseudo LOC102019358 60S ribosomal protein L18a pseudogene NW_004955454 14060960 14061488 - 102019358 AGCD01045461 MODEL 9020602 ncrna LOC102005782 uncharacterized LOC102005782 NW_004955410 28867225 28871620 + 102005782 AGCD01011262;AGCD01011263;GBDJ01369351;XR_259877 MODEL 9006063 protein-coding Ptcd2 pentatricopeptide repeat domain 2 INVOLVED IN heart development (ortholog); kidney development (ortholog); liver development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955575 1126978 1156727 + 102004763 AGCD01075233;GBDJ01350323;XM_005413937;XM_005413938;XM_013509609 XP_005413994;XP_005413995;XP_013365063 MODEL 730469097 snorna SNORA27 Small nucleolar RNA SNORA27 9055067 protein-coding Sdr16c5 short chain dehydrogenase/reductase family 16C member 5 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); DNA-binding transcription factor binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN keratinocyte proliferation (ortholog); negative regulation of gene expression, epigenetic (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN chromatin (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955454 15339353 15349180 - 102013796 AGCD01045492;GBDF01082585;XM_005396088 XP_005396145 MODEL 8726655 protein-coding Slc28a1 solute carrier family 28 member 1 ENCODES a protein that exhibits azole transmembrane transporter activity (ortholog); pyrimidine nucleobase transmembrane transporter activity (ortholog); pyrimidine- and adenosine-specific:sodium symporter activity (ortholog); INVOLVED IN azole transmembrane transport (ortholog); cytidine transport (ortholog); nucleoside import across plasma membrane (ortholog); PARTICIPATES IN capecitabine pharmacodynamics pathway; capecitabine pharmacokinetics pathway; gemcitabine pharmacodynamics pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); esophageal cancer (ortholog); High Myopia (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) NW_004955416 14226411 14267962 - 102009715 AGCD01017248;AGCD01017249;GBCQ01101688;XM_005381488;XM_013512686;XM_013512687 XP_005381545;XP_013368140;XP_013368141 MODEL 8856226 ncrna LOC102016212 uncharacterized LOC102016212 NW_004955402 7391497 7396480 - 102016212 AGCD01000173;GBDK01265607;XR_001235803;XR_001235805;XR_259042 MODEL 8869605 protein-coding Pnoc prepronociceptin ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); cellular response to ethanol (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH Acute Alcohol Sensitivity (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN synaptic membrane (ortholog) NW_004955403 50735567 50755892 + 102012392 AGCD01002969;GBDF01284017;XM_005373768;XM_005373769;XM_005373770 XP_005373825;XP_005373826;XP_005373827 MODEL 8739323 protein-coding LOC102004709 uncharacterized LOC102004709 NW_004955482 1567935 1574274 + 102004709 AGCD01057221;GBDJ01033180;XM_005402995;XR_263820;XR_263821;XR_263822 XP_005403052 MODEL 8723365 pseudo LOC102011967 serine-rich single-pass membrane protein 1-like NW_004955411 5417085 5417628 - 102011967 AGCD01011638 MODEL 8981706 pseudo LOC102013154 lys-63-specific deubiquitinase BRCC36-like NW_004955466 7752096 7926894 + 102013154 AGCD01050961;AGCD01050962;AGCD01050963;AGCD01050964;AGCD01050965;AGCD01050966;AGCD01050967;AGCD01050968;AGCD01050969;AGCD01050970;AGCD01050971;AGCD01050972 MODEL 9024948 protein-coding Ppcs phosphopantothenoylcysteine synthetase ENCODES a protein that exhibits identical protein binding (ortholog); phosphopantothenate--cysteine ligase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); coenzyme A biosynthetic process (ortholog); heart process (ortholog); PARTICIPATES IN pantothenic acid metabolic pathway; ASSOCIATED WITH dilated cardiomyopathy 2C (ortholog); FOUND IN catalytic complex (ortholog) NW_004955537 2080865 2084199 + 102013336 AGCD01070917;GBDK01187161;XM_005410610;XM_005410611;XM_013507766 XP_005410667;XP_005410668;XP_013363220 MODEL 8887064 protein-coding LOC102010758 vomeronasal type-1 receptor 3-like NW_004955603 530648 531616 + 102010758 AGCD01076850;XM_005414847 XP_005414904 MODEL 8748736 protein-coding Lmx1a LIM homeobox transcription factor 1 alpha ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); central nervous system development (ortholog); central nervous system neuron differentiation (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 7 (ortholog); Hearing Loss (ortholog); schizophrenia (ortholog) NW_004955462 11328583 11484438 + 102006223 AGCD01049389;AGCD01049390;AGCD01049391;GBCE01146328;XM_005398249;XM_013521354;XM_013521355 XP_005398306;XP_013376808;XP_013376809 MODEL 8875310 protein-coding Rad51ap1 RAD51 associated protein 1 ENCODES a protein that exhibits D-loop DNA binding (ortholog); DNA binding (ortholog); DNA secondary structure binding (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage response (ortholog); DNA recombination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleus (ortholog) NW_004955413 2335431 2362781 + 102004153 AGCD01013544;XM_005378737;XM_013511568 XP_005378794;XP_013367022 MODEL 8836600 protein-coding Rfc4 replication factor C subunit 4 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); enzyme binding (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog); Elg1 RFC-like complex (ortholog) NW_004955420 20948549 20967845 + 102028973 AGCD01021114;AGCD01021115;AGCD01021116;AGCD01021117;GBBH01051801;XM_005383263 XP_005383320 MODEL 9049329 ncrna LOC102019734 uncharacterized LOC102019734 NW_004955541 878508 883934 - 102019734 AGCD01071363;GBDF01003819;XR_264831 MODEL 9046295 protein-coding Pigx phosphatidylinositol glycan anchor biosynthesis class X INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-mannosyltransferase I complex (ortholog) NW_004955420 12825438 12853658 + 102024121 AGCD01020897;AGCD01020898;AGCD01020899;AGCD01020900;AGCD01020901;GBDF01156715;XM_005383594 XP_005383651 MODEL 730469323 misc_rna SPRY4-IT1_2 SPRY4-IT1 conserved region 2 8704247 pseudo LOC102005408 nucleosome assembly protein 1-like 1 pseudogene NW_004955515 171191 172070 + 102005408 AGCD01067185 MODEL 9045398 protein-coding Spag16 sperm associated antigen 16 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN axoneme assembly (ortholog); cell motility in response to calcium ion (ortholog); cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Breast Cancer, Familial (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN axonemal central apparatus (ortholog); axoneme (ortholog); cytoplasm (ortholog) NW_004955457 1543946 2492686 - 102022257 AGCD01046727;AGCD01046728;AGCD01046729;AGCD01046730;AGCD01046731;AGCD01046732;AGCD01046733;AGCD01046734;AGCD01046735;AGCD01046736;AGCD01046737;AGCD01046738;AGCD01046739;AGCD01046740;AGCD01046741;AGCD01046742;AGCD01046743;AGCD01046744;AGCD01046745;GBDF01050344;XM_005396922;XM_005396923;XM_005396924;XM_005396927;XM_013520778;XM_013520779;XM_013520780;XM_013520781 XP_005396979;XP_005396980;XP_005396981;XP_005396984;XP_013376232;XP_013376233;XP_013376234;XP_013376235 MODEL 8858528 ncrna LOC102008426 uncharacterized LOC102008426 NW_004955493 5730211 5734272 - 102008426 AGCD01061075;GBCQ01114580;XR_001231278;XR_264085 MODEL 8753426 pseudo LOC102009960 guanylate-binding protein 6-like NW_004955423 4772863 4789903 + 102009960 AGCD01023545 MODEL 8918901 pseudo LOC102008810 dnaJ homolog subfamily B member 6-like NW_004955403 27722644 27770774 - 102008810 AGCD01002323;AGCD01002324;AGCD01002325;AGCD01002326 MODEL 8939432 ncrna LOC102007257 uncharacterized LOC102007257 NW_004955510 4095118 4095706 - 102007257 AGCD01066254;GBDF01078004;XR_264407 MODEL 8960410 ncrna LOC102008041 uncharacterized LOC102008041 NW_004955402 703396 705592 + 102008041 AGCD01000030;GBCE01120029;XR_001233535 MODEL 8979723 ncrna LOC102006138 uncharacterized LOC102006138 NW_004955420 26173887 26191360 - 102006138 AGCD01021392;GBDF01207381;XR_001233810;XR_260757 MODEL 8755676 protein-coding Tpbgl trophoblast glycoprotein like NW_004955414 16580847 16583930 - 102015400 AGCD01015219;AGCD01015220;GBCE01168697;GBDF01122676;XM_013511705 XP_013367159 MODEL 8893947 protein-coding Rbm15b RNA binding motif protein 15B ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN dosage compensation by inactivation of X chromosome (ortholog); mRNA export from nucleus (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nuclear envelope (ortholog); nuclear speck (ortholog); nucleolus (ortholog) NW_004955532 3080207 3082312 + 102017499 AGCD01070267;GBBH01230101;XM_005410316 XP_005410373 MODEL 8842280 protein-coding Vwa3a von Willebrand factor A domain containing 3A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955493 780808 829768 + 102009069 AGCD01060864;AGCD01060865;GBBH01001724;XM_005405057;XM_005405058;XM_005405059;XM_005405060;XM_005405061;XM_005405062;XM_005405063;XM_005405064;XM_013504833;XM_013504834;XM_013504836;XM_013504837;XM_013504838;XM_013504840;XR_001231282;XR_264065;XR_264066;XR_264067;XR_264068;XR_264069;XR_264070 XP_005405114;XP_005405115;XP_005405116;XP_005405117;XP_005405118;XP_005405119;XP_005405120;XP_005405121;XP_013360287;XP_013360288;XP_013360290;XP_013360291;XP_013360292;XP_013360294 MODEL 8940320 protein-coding Bst1 bone marrow stromal cell antigen 1 ENCODES a protein that exhibits NAD+ nucleosidase activity, cyclic ADP-ribose generating (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); regulation of actin cytoskeleton organization (ortholog); regulation of calcium-mediated signaling (ortholog); PARTICIPATES IN ADP-ribosylation pathway, cyclic ribosylation; niacin metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog); uropod (ortholog) NW_004955480 8273887 8304127 - 102015953 AGCD01056717;AGCD01056718;GBDJ01403584;XM_005402522 XP_005402579 MODEL 8877786 protein-coding Thoc5 THO complex subunit 5 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN blastocyst development (ortholog); cell morphogenesis (ortholog); monocyte differentiation (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH anemia (ortholog); breast carcinoma (ortholog); cervical cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955455 3761933 3795517 - 102008060 AGCD01045650;AGCD01045651;GBCB01056026;XM_005396212;XM_013520426 XP_005396269;XP_013375880 MODEL 10309697 ncrna LOC106147406 uncharacterized LOC106147406 NW_004955555 125315 127948 + 106147406 AGCD01073024;GBBH01220012;XR_001232302 MODEL 8744770 protein-coding Plcd4 phospholipase C delta 4 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol phospholipase C activity (ortholog); INVOLVED IN acrosome reaction (ortholog); small GTPase-mediated signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebrotendinous xanthomatosis (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955453 14775119 14812872 - 102006870 AGCD01044873;AGCD01044874;GBDK01398186;XM_013519913;XM_013519914;XM_013519915;XM_013519916;XM_013519917;XM_013519918;XM_013519920;XM_013519921;XM_013519922;XM_013519923;XM_013519924;XM_013519925 XP_013375367;XP_013375368;XP_013375369;XP_013375370;XP_013375371;XP_013375372;XP_013375374;XP_013375375;XP_013375376;XP_013375377;XP_013375378;XP_013375379 MODEL 8881533 protein-coding LOC102022261 proline-rich nuclear receptor coactivator 2-like NW_004955462 14718733 14721852 + 102022261 AGCD01049456;XM_005398309;XM_013521432 XP_005398366;XP_013376886 MODEL 8810622 protein-coding Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955482 5457159 5461694 - 102018093 AGCD01057330;AGCD01057331;GBCB01097803;GBDJ01187224;XM_005403037 XP_005403094 MODEL 8826727 protein-coding Serping1 serpin family G member 1 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of complement activation, lectin pathway (ortholog); PARTICIPATES IN coagulation cascade pathway; kallikrein-kinin cascade pathway; ASSOCIATED WITH acquired angioedema (ortholog); Acute Experimental Pancreatitis (ortholog); Acute Lung Injury (ortholog); FOUND IN extracellular region (ortholog) NW_004955511 2545337 2557850 + 102019092 AGCD01066414;GBCQ01008778;GBDF01198841;XM_013506484 XP_013361938 MODEL 39131709 snorna SNORA71 Small nucleolar RNA SNORA71 39133285 snrna U4 U4 spliceosomal RNA 10088056 protein-coding Prr16 proline rich 16 INVOLVED IN positive regulation of cell size (ortholog); positive regulation of translation (ortholog) NW_004955408 40118918 40251144 + 106147119 AGCD01009120;AGCD01009121;AGCD01009122;AGCD01009123;AGCD01009124;AGCD01009125;GBDF01210195;GBDJ01048148;XM_013507054 XP_013362508 MODEL 8798030 protein-coding Rps21 ribosomal protein S21 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); Disease Progression (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955528 1674744 1676114 - 102028572 AGCD01069568;GBDF01007140;XM_005410022;XM_005410024 XP_005410079;XP_005410081 MODEL 8971068 protein-coding Ptcd3 pentatricopeptide repeat domain 3 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); rRNA binding (ortholog); INVOLVED IN mitochondrial translation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955424 1480934 1507621 - 102020581 AGCD01024237;GBDI01127765;XM_005385406;XM_013514671;XM_013514672 XP_005385463;XP_013370125;XP_013370126 MODEL 8735148 ncrna LOC102016214 uncharacterized LOC102016214 NW_004955449 11070441 11094994 - 102016214 AGCD01042083;GBDF01178339;XR_262498 MODEL 8960145 protein-coding Pgbd2 piggyBac transposable element derived 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955418 29951478 29985800 + 102019699 AGCD01019492;AGCD01019493;AGCD01019494;AGCD01019495;AGCD01019496;GBDF01256923;XM_005382331;XM_005382332;XM_013513077 XP_005382388;XP_005382389;XP_013368531 MODEL 8970638 protein-coding LOC102003963 platelet basic protein-like NW_004955474 308503 310298 + 102003963 AGCD01054213;GBCQ01144875;XM_005401302 XP_005401359 MODEL 8971942 protein-coding Entrep2 endosomal transmembrane epsin interactor 2 ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog) NW_004955416 29103925 29389149 + 102020337 AGCD01017645;AGCD01017646;AGCD01017647;AGCD01017648;AGCD01017649;AGCD01017650;AGCD01017651;AGCD01017652;AGCD01017653;AGCD01017654;AGCD01017655;GBDF01273920;XM_013512428 XP_013367882 MODEL 730469218 snorna SNORA43 Small nucleolar RNA SNORA43 39132983 snrna U1 U1 spliceosomal RNA 730469207 snorna SNORA11 Small nucleolar RNA SNORA11 8778320 pseudo LOC102011560 uncharacterized protein C8orf59 homolog NW_004955500 5318759 5319643 - 102011560 AGCD01063830 MODEL 8773692 protein-coding Rad51ap2 RAD51 associated protein 2 ASSOCIATED WITH cervical cancer (ortholog); high grade glioma (ortholog); melanoma (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955469 312601 320227 - 102025563 AGCD01052219;AGCD01052220;GBDF01078994;XM_005415294 XP_005415351 MODEL 39132692 snorna SNORD28 Small nucleolar RNA SNORD28 9002159 pseudo LOC102005784 SH2B adapter protein 1 pseudogene NW_004955464 13239686 13248332 - 102005784 AGCD01050265;XM_005398719 MODEL 730469248 snorna SNORA28 Small nucleolar RNA SNORA28 8789854 ncrna LOC102011132 uncharacterized LOC102011132 NW_004955424 5106865 5118485 + 102011132 AGCD01024384;GBDF01016619;XR_261042 MODEL 8812973 ncrna LOC102019360 uncharacterized LOC102019360 NW_004955455 1777137 1777874 + 102019360 AGCD01045584;GBDF01053108;XR_262814 MODEL 8883047 protein-coding LOC102013156 NACHT, LRR and PYD domains-containing protein 1-like NW_004955467 10918926 10962941 - 102013156 AGCD01051587;AGCD01051588;AGCD01051589;AGCD01051590;XM_013522040 XP_013377494 MODEL 8802893 protein-coding Ppdpf pancreatic progenitor cell differentiation and proliferation factor INVOLVED IN liver development (ortholog); TOR signaling (ortholog); TORC1 signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955528 701182 718037 - 102010406 AGCD01069542;AGCD01069543;AGCD01069544;GBCE01002191;GBCQ01007600;XM_013507430 XP_013362884 MODEL 9048585 ncrna LOC102010759 uncharacterized LOC102010759 NW_004955403 1971342 1976194 - 102010759 AGCD01001728;GBDF01124321;XR_259134 MODEL 8885644 pseudo LOC102011971 60S ribosomal protein L3 pseudogene NW_004955468 5498734 5501315 - 102011971 AGCD01051971;XR_263421 MODEL 8790749 ncrna LOC102019735 uncharacterized LOC102019735 NW_004955438 17701064 17708297 - 102019735 AGCD01035450;GBDF01079005;XR_261945 MODEL 10116242 protein-coding LOC106150306 translation initiation factor IF-2-like NW_004955471 10315810 10317324 - 106150306 AGCD01053229;GBDJ01061454;GBDK01042773;XM_013522867 XP_013378321 MODEL 8790732 pseudo LOC102018148 fructose-bisphosphate aldolase A pseudogene NW_004955403 51024231 51025067 - 102018148 AGCD01002985 MODEL 9014846 protein-coding Rfc5 replication factor C subunit 5 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); enzyme binding (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog); Rad17 RFC-like complex (ortholog) NW_004955455 13325912 13337241 - 102020758 AGCD01046069;GBDF01300839;XM_005396539 XP_005396596 MODEL 8726546 protein-coding Rbm17 RNA binding motif protein 17 INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955421 22732757 22745926 + 102030537 AGCD01022147;AGCD01022148;GBDF01086381;XM_005383861 XP_005383918 MODEL 8797223 protein-coding Trim71 tripartite motif containing 71 ENCODES a protein that exhibits miRNA binding (ortholog); translation repressor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH congenital hydrocephalus (ortholog); congenital hydrocephalus 4 (ortholog); COVID-19 (ortholog); FOUND IN P-body (ortholog) NW_004955421 97130 174326 + 102026436 AGCD01021547;AGCD01021548;AGCD01021549;AGCD01021550;GBDF01285530;XM_013513644 XP_013369098 MODEL 8941576 protein-coding Spryd3 SPRY domain containing 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955458 347600 367264 - 102011179 AGCD01047120;AGCD01047121;AGCD01047122;GBDJ01025161;XM_005397141;XM_013520874 XP_005397198;XP_013376328 MODEL 8997702 protein-coding Pnp purine nucleoside phosphorylase ENCODES a protein that exhibits guanosine phosphorylase activity (ortholog); identical protein binding (ortholog); nucleoside binding (ortholog); INVOLVED IN allantoin metabolic process (ortholog); dAMP catabolic process (ortholog); deoxyadenosine catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955550 1290816 1299553 + 102026162 AGCD01072560;GBCE01002066;XM_005412065 XP_005412122 MODEL 8891018 protein-coding Sdr39u1 short chain dehydrogenase/reductase family 39U member 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955409 35867944 35870847 + 102026193 AGCD01010435;GBDF01083948;XM_005377000;XM_013510391 XP_005377057;XP_013365845 MODEL 8916580 ncrna LOC102008434 uncharacterized LOC102008434 NW_004955424 11874487 11899092 + 102008434 AGCD01024575;AGCD01024576;GBDF01252131;XR_001234207;XR_001234208;XR_001234209;XR_001234210;XR_001234211;XR_001234212;XR_001234213;XR_261052 MODEL 8866336 ncrna LOC102008048 uncharacterized LOC102008048 NW_004955403 45870106 45876316 - 102008048 AGCD01002838;GBDJ01116277;XR_259242 MODEL 9036894 ncrna LOC102008813 uncharacterized LOC102008813 NW_004955452 14619352 14627007 - 102008813 AGCD01044473;GBDF01305185;XR_262691 MODEL 9035258 protein-coding Lmx1b LIM homeobox transcription factor 1 beta ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); camera-type eye development (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH clubfoot (ortholog); Developmental Disabilities (ortholog); disease of mental health (ortholog); FOUND IN nucleus (ortholog) NW_004955419 1782566 1857375 - 102010371 AGCD01019658;AGCD01019659;GBCE01047362;XM_005382450;XM_005382451 XP_005382507;XP_005382508 MODEL 8925355 pseudo LOC102005409 CTD small phosphatase-like protein 2 pseudogene NW_004955520 665791 667200 - 102005409 AGCD01068028 MODEL 8750454 protein-coding Spag17 sperm associated antigen 17 INVOLVED IN axonemal central apparatus assembly (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); intramanchette transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); cranioectodermal dysplasia 2 (ortholog); FOUND IN acrosomal vesicle (ortholog); axonemal central apparatus (ortholog); cytoplasm (ortholog) NW_004955435 21063005 21281997 - 102011581 AGCD01033468;AGCD01033469;AGCD01033470;AGCD01033471;AGCD01033472;AGCD01033473;AGCD01033474;GBDK01356416;XM_005389065;XM_013516482;XM_013516483;XM_013516484;XM_013516485;XM_013516486;XM_013516488;XR_001234871 XP_005389122;XP_013371936;XP_013371937;XP_013371938;XP_013371939;XP_013371940;XP_013371942 MODEL 8758771 ncrna LOC102006139 uncharacterized LOC102006139 NW_004955487 380275 384952 - 102006139 AGCD01059217;AGCD01059218;GBDF01221413;XR_263979 MODEL 8877913 ncrna LOC102009962 uncharacterized LOC102009962 NW_004955423 22423709 22437613 + 102009962 AGCD01023966;GBDF01176631;XR_260987 MODEL 8942710 protein-coding Pigy phosphatidylinositol glycan anchor biosynthesis class Y ENCODES a protein that exhibits phosphatidylinositol N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH hyperphosphatasia with impaired intellectual development syndrome (ortholog); hyperphosphatasia with impaired intellectual development syndrome 6 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (ortholog); plasma membrane (ortholog) NW_004955474 11945871 11946419 + 102024220 AGCD01054643;XM_005401449 XP_005401506 MODEL 8921092 protein-coding Rnf43 ring finger protein 43 ENCODES a protein that exhibits frizzled binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of Wnt signaling pathway (ortholog); protein ubiquitination (ortholog); stem cell proliferation (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH ascending colon cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955451 4604985 4680762 + 102026061 AGCD01043133;AGCD01043134;AGCD01043135;AGCD01043136;AGCD01043137;AGCD01043138;AGCD01043139;GBDK01284103;XM_005394022;XM_005394023;XM_005394025;XM_013519266 XP_005394079;XP_005394080;XP_005394082;XP_013374720 MODEL 9038442 protein-coding Tpcn1 two pore segment channel 1 ENCODES a protein that exhibits identical protein binding (ortholog); intracellularly phosphatidylinositol-3,5-bisphosphate-gated monatomic cation channel activity (ortholog); ligand-gated sodium channel activity (ortholog); INVOLVED IN endocytosis involved in viral entry into host cell (ortholog); positive regulation of autophagy (ortholog); sodium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN early endosome membrane (ortholog); endolysosome (ortholog); endosome membrane (ortholog) NW_004955482 9538572 9594739 + 102015201 AGCD01057574;GBBH01119361;XM_005403217;XM_005403218;XM_005403219;XM_005403220;XM_005403221;XM_005403222 XP_005403274;XP_005403275;XP_005403276;XP_005403277;XP_005403278;XP_005403279 MODEL 8959152 ncrna LOC102004713 uncharacterized LOC102004713 NW_004955485 7094407 7100426 - 102004713 AGCD01058634;GBDI01190651;XR_263916 MODEL 8856439 protein-coding Slc28a2 solute carrier family 28 member 2 ENCODES a protein that exhibits neurotransmitter transmembrane transporter activity (ortholog); nucleoside transmembrane transporter activity (ortholog); nucleoside:sodium symporter activity (ortholog); INVOLVED IN adenosine transport (ortholog); inosine transport (ortholog); neurotransmitter transport (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); FOUND IN apicolateral plasma membrane (ortholog); brush border membrane (ortholog); coated vesicle (ortholog) NW_004955409 8145723 8175256 - 102022678 AGCD01009382;GBDK01394240;XM_005376738;XR_001232515 XP_005376795 MODEL 8804085 protein-coding Prdm1 PR/SET domain 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); histone methyltransferase binding (ortholog); INVOLVED IN aorta development (ortholog); artery morphogenesis (ortholog); cardiac septum development (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); central nervous system lymphoma (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955411 31434503 31455995 + 102005015 AGCD01012273;GBDK01284038;XM_005377825;XM_005377826 XP_005377882;XP_005377883 MODEL 8774127 protein-coding Bsx brain specific homeobox ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN eating behavior (ortholog); locomotory behavior (ortholog); mammary gland involution (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955412 23796973 23801479 - 102019787 AGCD01013095;XM_005378374 XP_005378431 MODEL 9049352 pseudo LOC102022262 prefoldin subunit 4 pseudogene NW_004955410 20756924 20757610 - 102022262 AGCD01011051 MODEL 8702344 protein-coding Rps23 ribosomal protein S23 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); maintenance of translational fidelity (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH autistic disorder (ortholog); brachycephaly, trichomegaly, and developmental delay (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955418 28106333 28108276 + 102011769 AGCD01019428;AY533228;GBDF01010421;NM_001282369 AAS59430;NP_001269298;P62298 PROVISIONAL 8870275 protein-coding Snrnp40 small nuclear ribonucleoprotein U5 subunit 40 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955452 9759452 9793105 - 102007081 AGCD01044260;AGCD01044261;GBBH01208189;XM_005395015 XP_005395072 MODEL 39131716 snorna SNORA71 Small nucleolar RNA SNORA71 8809041 protein-coding Thoc6 THO complex subunit 6 INVOLVED IN central nervous system development (ortholog); mRNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH Beaulieu-Boycott-Innes Syndrome (ortholog); cryptorchidism (ortholog); Developmental Disabilities (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955442 14314100 14317726 - 102007059 AGCD01037810;GBDK01189523;XM_005391375;XM_005391377 XP_005391432;XP_005391434 MODEL 39133287 snrna U4 U4 spliceosomal RNA 9047365 protein-coding LOC102007258 glycine N-phenylacetyltransferase-like NW_004955511 3686412 3716368 - 102007258 AGCD01066472;AGCD01066473;AGCD01066474;GBCQ01037301;XM_005408050;XM_005408051;XM_005408052;XM_005408054;XM_005408055;XM_013506345;XM_013506346 XP_005408107;XP_005408108;XP_005408109;XP_005408111;XP_005408112;XP_013361799;XP_013361800 MODEL 8762701 protein-coding Ptch1 patched 1 ENCODES a protein that exhibits cholesterol binding (ortholog); cyclin binding (ortholog); hedgehog family protein binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); brain development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN apical part of cell (ortholog); axonal growth cone (ortholog); caveola (ortholog) NW_004955422 22362330 22418062 - 102005945 AGCD01023158;GBCE01185669;GBDF01209723;XM_013514312 XP_013369766 MODEL 9013641 protein-coding Serpinh1 serpin family H member 1 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN chondrocyte development involved in endochondral bone morphogenesis (ortholog); collagen biosynthetic process (ortholog); collagen fibril organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955414 16284845 16292828 - 102024992 AGCD01015208;GBCE01003981;XM_005379884;XM_005379885;XM_013512064 XP_005379941;XP_005379942;XP_013367518 MODEL 8772465 protein-coding Vwa3b von Willebrand factor A domain containing 3B ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 22 (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955470 4658088 4850277 + 102027837 AGCD01052734;AGCD01052735;AGCD01052736;AGCD01052737;AGCD01052738;AGCD01052739;GBDF01081475;XM_005400699;XM_005400700;XM_005400701;XM_005400703;XM_005400704;XM_005400705;XM_005400706;XM_005400707;XM_013522812 XP_005400756;XP_005400757;XP_005400758;XP_005400760;XP_005400761;XP_005400762;XP_005400763;XP_005400764;XP_013378266 MODEL 10311493 ncrna LOC106147407 uncharacterized LOC106147407 NW_004955555 1888854 1891540 - 106147407 AGCD01073111;AGCD01073112;XR_001232303 MODEL 730469114 snorna SNORA43 Small nucleolar RNA SNORA43 39132984 snrna U1 U1 spliceosomal RNA 9040166 pseudo LOC102003968 striatin-3-like NW_004955483 708746 721428 - 102003968 AGCD01057628 MODEL 8763213 protein-coding Prr19 proline rich 19 ASSOCIATED WITH lung cancer (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog) NW_004955555 605333 610104 - 102024386 AGCD01073039;GBBH01137288;XM_005412367;XM_005412368;XM_005412369;XM_005412370;XM_005412371;XM_005412372 XP_005412424;XP_005412425;XP_005412426;XP_005412427;XP_005412428;XP_005412429 MODEL 8930453 protein-coding Pgbd4 piggyBac transposable element derived 4 NW_004955496 1861479 1869071 + 102003888 AGCD01062260;GBCQ01012331;XM_013505386;XM_013505387;XM_013505388;XM_013505389;XM_013505390;XM_013505391 XP_013360840;XP_013360841;XP_013360842;XP_013360843;XP_013360844;XP_013360845 MODEL 39133603 snorna SNORD29 Small nucleolar RNA SNORD29 8718403 ncrna LOC102008436 uncharacterized LOC102008436 NW_004955501 720309 731808 + 102008436 AGCD01064038;GBDF01158739;XR_001231521 MODEL 8796130 pseudo LOC102011563 serine/threonine-protein kinase Sgk1 pseudogene NW_004955426 24322315 24323612 + 102011563 AGCD01026676 MODEL 730469091 snorna SNORA28 Small nucleolar RNA SNORA28 8940064 pseudo LOC102005785 pleckstrin homology domain-containing family B member 2 pseudogene NW_004955411 11025058 11025724 + 102005785 AGCD01011800 MODEL 8959727 protein-coding Rad51b RAD51 paralog B ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); double-stranded DNA binding (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN blastocyst growth (ortholog); double-strand break repair via homologous recombination (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Rad51B-Rad51C-Rad51D-XRCC2 complex (ortholog); replication fork (ortholog) NW_004955466 1686472 2388146 - 102006230 AGCD01050717;AGCD01050718;AGCD01050719;AGCD01050720;AGCD01050721;AGCD01050722;AGCD01050723;AGCD01050724;AGCD01050725;AGCD01050726;AGCD01050727;AGCD01050728;AGCD01050729;AGCD01050730;AGCD01050731;AGCD01050732;AGCD01050733;AGCD01050734;AGCD01050735;AGCD01050736;GBBH01025954;XM_005399051;XM_005399052;XM_013521905;XM_013521906;XM_013521907;XM_013521908;XM_013521909;XM_013521910;XM_013521912;XM_013521913;XM_013521914;XM_013521915;XM_013521916;XM_013521917;XR_001236784;XR_001236785;XR_001236786;XR_001236787;XR_001236788;XR_001236789;XR_001236790;XR_001236791 XP_005399108;XP_005399109;XP_013377359;XP_013377360;XP_013377361;XP_013377362;XP_013377363;XP_013377364;XP_013377366;XP_013377367;XP_013377368;XP_013377369;XP_013377370;XP_013377371 MODEL 8710348 protein-coding Plce1 phospholipase C epsilon 1 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); enzyme binding (ortholog); phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN diacylglycerol biosynthetic process (ortholog); epidermal growth factor receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); benign familial hematuria (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog); plasma membrane (ortholog) NW_004955507 555570 825568 + 102004404 AGCD01065477;AGCD01065478;AGCD01065479;AGCD01065480;AGCD01065481;AGCD01065482;AGCD01065483;AGCD01065484;AGCD01065485;AGCD01065486;AGCD01065487;AGCD01065488;GBDK01321403;XM_005407528;XM_013506159;XM_013506160 XP_005407585;XP_013361613;XP_013361614 MODEL 8988606 protein-coding Rit2 Ras like without CAAX 2 ENCODES a protein that exhibits calmodulin binding (ortholog); chromatin binding (ortholog); GTP binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); maintenance of protein location in cell (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); melanoma (ortholog); sarcoma (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); dendritic tree (ortholog) NW_004955402 28737882 29137006 - 102021405 AGCD01000728;AGCD01000729;AGCD01000730;AGCD01000731;AGCD01000732;AGCD01000733;AGCD01000734;AGCD01000735;AGCD01000736;AGCD01000737;AGCD01000738;GBDI01042722;XM_005372848;XM_005372849 XP_005372905;XP_005372906 MODEL 9015840 protein-coding LOC102019361 serine/threonine-protein kinase B-raf-like NW_004955407 3772121 3773907 - 102019361 AGCD01006864;GBDJ01076254;XM_005375516 XP_005375573 MODEL 8987737 protein-coding Pigz phosphatidylinositol glycan anchor biosynthesis class Z (Gwada blood group) ENCODES a protein that exhibits dol-P-Man:Man(3)GlcN-acyl-PI alpha-1,2-mannosyltransferase activity (ortholog); mannosyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955420 12994892 13003170 - 102017458 AGCD01020910;GBDI01182697;GBDJ01228590;XM_013513393 XP_013368847 MODEL 730469224 snorna SNORA11 Small nucleolar RNA SNORA11 8790185 protein-coding Entrep3 endosomal transmembrane epsin interactor 3 ENCODES a protein that exhibits WW domain binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955545 1703860 1710120 - 102023398 AGCD01071868;AGCD01071869;GBBH01067051;GBDK01395802;XM_013508339;XM_013508340 XP_013363793;XP_013363794 MODEL 9068137 protein-coding Rfesd Rieske Fe-S domain containing NW_004955418 16897714 16900324 - 102015723 AGCD01019133;GBBH01113392;GBCB01057071;XM_013513067 XP_013368521 MODEL 8737599 protein-coding LOC102011975 olfactory receptor 52B2-like NW_004955414 21918896 21919849 - 102011975 AGCD01015437;XM_005380105 XP_005380162 MODEL 8849879 protein-coding LOC102010760 retinitis pigmentosa 9 protein NW_004955617 180456 193992 - 102010760 AGCD01077272;AGCD01077273;GBCE01004432;GBCE01098928;XM_013510144 XP_013365598 MODEL 8908957 ncrna LOC102011133 uncharacterized LOC102011133 NW_004955496 4331938 4345273 + 102011133 AGCD01062320;GBDF01074903;XR_264176 MODEL 8716878 pseudo LOC102016215 60S ribosomal protein L39 pseudogene NW_004955402 44397823 44398005 - 102016215 AGCD01001113;XM_005373008 MODEL 8916438 protein-coding Sdr42e1 short chain dehydrogenase/reductase family 42E, member 1 ASSOCIATED WITH acromesomelic dysplasia 4 (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955564 2019135 2042680 + 102025734 AGCD01074252;AGCD01074253;AGCD01074254;AGCD01074255;GBCE01023135;XM_005413243 XP_005413300 MODEL 8822490 pseudo LOC102008050 mitochondrial import receptor subunit TOM22 homolog pseudogene NW_004955452 2641703 2642225 - 102008050 AGCD01043901 MODEL 8927714 protein-coding Lnp1 leukemia NUP98 fusion partner 1 ASSOCIATED WITH colorectal cancer (ortholog); melanoma (ortholog); NEURODEVELOPMENTAL DISORDER WITH EPILEPSY AND HYPOPLASIA OF THE CORPUS CALLOSUM (ortholog) NW_004955427 1929092 1956878 + 102021577 AGCD01026886;AGCD01026887;GBDF01000484;XM_005386296 XP_005386353 MODEL 9054681 protein-coding Snrnp48 small nuclear ribonucleoprotein U11/U12 subunit 48 ASSOCIATED WITH acute myeloid leukemia (ortholog); Carvajal syndrome (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); spliceosomal complex (ortholog); U11/U12 snRNP (ortholog) NW_004955465 6339362 6353563 - 102027391 AGCD01050441;GBDJ01316518;XM_005398851 XP_005398908 MODEL 8756810 protein-coding Spryd4 SPRY domain containing 4 ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) NW_004955458 4051978 4053734 + 102010033 AGCD01047364;GBDI01357431;XM_005397315 XP_005397372 MODEL 8768365 protein-coding Rbm18 RNA binding motif protein 18 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955419 5800761 5822378 + 102009947 AGCD01019839;GBDF01122288;XM_005382536 XP_005382593 MODEL 8869535 protein-coding LOC102009964 vegetative cell wall protein gp1-like NW_004955495 4922998 4925566 + 102009964 AGCD01061964;GBCQ01088688;XM_005406155 XP_005406212 MODEL 8849684 pseudo LOC102006140 C-Myc-binding protein pseudogene NW_004955488 2573938 2602551 + 102006140 AGCD01059547 MODEL 8843091 protein-coding Rnf44 ring finger protein 44 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955408 28809383 28826587 - 102011507 AGCD01008731;AGCD01008732;GBDJ01269237;XM_005376379;XM_013509585;XM_013509593;XM_013509599;XM_013509602;XM_013509603;XM_013509610;XM_013509613;XM_013509614;XM_013509616 XP_005376436;XP_013365039;XP_013365047;XP_013365053;XP_013365056;XP_013365057;XP_013365064;XP_013365067;XP_013365068;XP_013365070 MODEL 8800798 ncrna LOC102018152 uncharacterized LOC102018152 NW_004955452 7664103 7667411 - 102018152 AGCD01044180;GBDI01004050;XR_262660 MODEL 39131390 protein-coding PPDPF pancreatic progenitor cell differentiation and proliferation factor 8942912 protein-coding LOC102004714 potassium voltage-gated channel subfamily F member 1 NW_004955487 5789494 5793301 + 102004714 AGCD01059347;XM_005404422 XP_005404479 MODEL 10121491 ncrna LOC106150307 uncharacterized LOC106150307 NW_004955471 10721212 10724134 - 106150307 AGCD01053234;GBDF01112970;XR_001237042 MODEL 8930458 protein-coding Trim72 tripartite motif containing 72 ENCODES a protein that exhibits identical protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN muscle organ development (ortholog); muscle system process (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); sarcolemma (ortholog) NW_004955493 8074521 8091611 + 102004173 AGCD01061260;AGCD01061261;AGCD01061262;AGCD01061263;GBCB01006024;XM_005405311;XM_005405312 XP_005405368;XP_005405369 MODEL 8791048 protein-coding LOC102008817 C4b-binding protein alpha chain-like NW_004955406 42709359 42715864 + 102008817 AGCD01006714;GBBH01192869;XM_005375486 XP_005375543 MODEL 8794629 protein-coding Spag4 sperm associated antigen 4 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN microtubule (ortholog); nuclear envelope (ortholog) NW_004955422 25840302 25844787 - 102009071 AGCD01023269;GBDF01000367;XM_005384785;XM_005384788 XP_005384842;XP_005384845 MODEL 8942950 protein-coding Pnpla1 patatin like domain 1, omega-hydroxyceramide transacylase ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); omega-hydroxyceramide transacylase activity (ortholog); structural constituent of skin epidermis (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); establishment of skin barrier (ortholog); keratinocyte differentiation (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 10 (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog) NW_004955437 4008814 4047895 + 102008889 AGCD01034359;GBCQ01173759;XM_013517129;XM_013517130 XP_013372583;XP_013372584 MODEL 8943034 pseudo LOC102019738 60S ribosomal protein L6-like NW_004955439 671623 673110 - 102019738 AGCD01035592 MODEL 730469272 snorna SNORA44 Small nucleolar RNA SNORA44 9009892 protein-coding Rps24 ribosomal protein S24 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); translation initiation factor binding (ortholog); INVOLVED IN cytoplasmic translation (ortholog); erythrocyte homeostasis (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955437 14435822 14442662 - 102019956 AGCD01034672;GBDF01007125;XM_005389895;XM_005389897;XM_005389898;XM_013516999;XM_013517000 XP_005389952;XP_005389954;XP_005389955;XP_013372453;XP_013372454 MODEL 9053374 ncrna LOC102005410 uncharacterized LOC102005410 NW_004955435 5085524 5096408 - 102005410 AGCD01032876;GBDF01087889;XR_001234879 MODEL 39131711 snorna SNORA71 Small nucleolar RNA SNORA71 9001904 ncrna LOC102022263 uncharacterized LOC102022263 NW_004955464 3566129 3568526 - 102022263 AGCD01049974;GBDF01017563;XR_001236671;XR_263194 MODEL 8909809 protein-coding Prdm10 PR/SET domain 10 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Birt-Hogg-Dube syndrome (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955412 30855909 30929998 - 102020099 AGCD01013312;AGCD01013313;AGCD01013314;AGCD01013315;AGCD01013316;GBDF01162914;GBDK01038990;XM_013511217 XP_013366671 MODEL 9029472 protein-coding LOC102013159 uncharacterized LOC102013159 NW_004955413 887408 905781 + 102013159 AGCD01013494;GBBH01011689;XM_013511285 XP_013366739 MODEL 8964967 protein-coding Thoc7 THO complex subunit 7 INVOLVED IN mRNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955517 2037406 2046694 + 102020368 AGCD01067614;AGCD01067615;GBDF01082152;GBDI01068250;XM_013506938 XP_013362392 MODEL 9013972 protein-coding LOC102007259 olfactory receptor 5B3-like NW_004955511 3322239 3323164 - 102007259 AGCD01066458;GBDF01075823;XM_013506402 XP_013361856 MODEL 8994578 protein-coding Tpcn2 two pore segment channel 2 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); intracellularly phosphatidylinositol-3,5-bisphosphate-gated monatomic cation channel activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); endocytosis involved in viral entry into host cell (ortholog); endosome to lysosome transport of low-density lipoprotein particle (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); brain infarction (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endolysosome membrane (ortholog); endosome membrane (ortholog); late endosome membrane (ortholog) NW_004955422 16899730 16923962 - 102026124 AGCD01022904;GBDI01264096;XM_005384252;XM_013514134;XM_013514135;XM_013514136 XP_005384309;XP_013369588;XP_013369589;XP_013369590 MODEL 8819473 protein-coding Ptch2 patched 2 ENCODES a protein that exhibits hedgehog family protein binding (ortholog); hedgehog receptor activity (ortholog); smoothened binding (ortholog); INVOLVED IN cell fate determination (ortholog); epidermal cell fate specification (ortholog); epidermis development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog) NW_004955464 13387844 13403991 + 102009156 AGCD01050274;AGCD01050275;GBDJ01143446;XM_005398741;XM_013521618;XM_013521619;XM_013521620;XM_013521621;XM_013521622;XM_013521623;XM_013521624;XM_013521625 XP_005398798;XP_013377072;XP_013377073;XP_013377074;XP_013377075;XP_013377076;XP_013377077;XP_013377078;XP_013377079 MODEL 8859465 protein-coding Btaf1 B-TFIID TATA-box binding protein associated factor 1 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); transcription coregulator activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955425 1239640 1350327 - 102014377 AGCD01025219;AGCD01025220;AGCD01025221;AGCD01025222;AGCD01025223;GBBH01149822;GBDK01319184;XM_013514876 XP_013370330 MODEL 8918958 protein-coding Serpini1 serpin family I member 1 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN positive regulation of neuron projection development (ortholog); ASSOCIATED WITH familial encephalopathy with neuroserpin inclusion bodies (ortholog); Familial Pancreatic Carcinoma (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic vesicle lumen (ortholog); extracellular region (ortholog); neuronal cell body (ortholog) NW_004955448 16947375 16982114 + 102012485 AGCD01041705;AGCD01041706;AGCD01041707;GBBH01191602;XM_005393142;XM_013518652;XM_013518653 XP_005393199;XP_013374106;XP_013374107 MODEL 8993067 protein-coding Slc28a3 solute carrier family 28 member 3 ENCODES a protein that exhibits purine-specific nucleoside:sodium symporter activity (ortholog); pyrimidine- and adenosine-specific:sodium symporter activity (ortholog); uridine transmembrane transporter activity (ortholog); INVOLVED IN nucleoside transmembrane transport (ortholog); purine nucleoside transmembrane transport (ortholog); pyrimidine nucleoside transport (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; gemcitabine pharmacodynamics pathway; gemcitabine pharmacokinetics pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN brush border membrane (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955432 2892594 2948196 + 102003169 AGCD01030621;GBBH01011350;XM_013516020;XM_013516021;XM_013516022 XP_013371474;XP_013371475;XP_013371476 MODEL 8739736 protein-coding Prr22 proline rich 22 ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955495 3660380 3662642 + 102022615 AGCD01061874;GBDJ01128662;XM_005405753;XM_013505196 XP_005405810;XP_013360650 MODEL 39132985 snrna U1 U1 spliceosomal RNA 8810340 pseudo LOC102003975 tubulin alpha-1 chain-like NW_004955420 23684889 23685741 + 102003975 AGCD01021253 MODEL 8856898 protein-coding LOC102011976 lysozyme C-like NW_004955470 12811161 12816338 - 102011976 AGCD01052943;GBCC01001129;XM_005400814 XP_005400871 MODEL 39131727 snorna SNORD30 Small nucleolar RNA SNORD30 39133289 snrna U4 U4 spliceosomal RNA 730469430 snorna SNORA28 Small nucleolar RNA SNORA28 8792392 ncrna LOC102008437 uncharacterized LOC102008437 NW_004955501 6949506 6954792 - 102008437 AGCD01064202;GBDF01210166;XR_264256 MODEL 8860199 protein-coding Pgbd5 piggyBac transposable element derived 5 ENCODES a protein that exhibits transposase activity (ortholog); INVOLVED IN non-replicative DNA transposition (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); melanoma (ortholog); Neoplastic Cell Transformation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955492 8032220 8090898 + 102013621 AGCD01060808;GBBH01204516;GBCB01089036;XM_005404993 XP_005405050 MODEL 8828295 protein-coding Rad51c RAD51 paralog C ENCODES a protein that exhibits crossover junction DNA endonuclease activity (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN DNA recombination (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH anxiety disorder (ortholog); bilateral breast cancer (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955451 4053195 4178226 - 102017412 AGCD01043089;AGCD01043090;AGCD01043091;AGCD01043092;AGCD01043093;AGCD01043094;AGCD01043095;AGCD01043096;GBDF01190598;XM_005393995;XM_005393996;XM_005393997;XM_013519222;XM_013519223;XR_001235967 XP_005394052;XP_005394053;XP_005394054;XP_013374676;XP_013374677 MODEL 8852591 protein-coding Lnpep leucyl and cystinyl aminopeptidase ENCODES a protein that exhibits aminopeptidase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); neuropeptide catabolic process (ortholog); peptide catabolic process (ortholog); PARTICIPATES IN angiotensin IV signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; long term potentiation; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle membrane (ortholog); insulin-responsive compartment (ortholog) NW_004955418 15631703 15718711 - 102009282 AGCD01019109;AGCD01019110;AGCD01019111;GBBH01187295;XM_005382222 XP_005382279 MODEL 8885512 ncrna LOC102008818 uncharacterized LOC102008818 NW_004955407 17028813 17032767 - 102008818 AGCD01007235;GBCB01103543;XR_259562 MODEL 8927276 ncrna LOC102004716 uncharacterized LOC102004716 NW_004955421 23128250 23159410 + 102004716 AGCD01022173;GBDF01053857;XR_001233869;XR_260817 MODEL 730469243 snorna SNORA11 Small nucleolar RNA SNORA11 8787567 protein-coding Vwa5a von Willebrand factor A domain containing 5A ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955412 24850301 24874498 + 102003105 AGCD01013130;GBBH01115484;XM_005378408;XM_005378409 XP_005378465;XP_005378466 MODEL 39132084 snorna SNORA72 Small nucleolar RNA SNORA72 8752893 protein-coding Rffl ring finger and FYVE like domain containing E3 ubiquitin protein ligase ENCODES a protein that exhibits p53 binding (ortholog); protease binding (ortholog); protein kinase binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); negative regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH hypertension (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); endosome membrane (ortholog) NW_004955481 9718369 9788048 - 102008852 AGCD01057112;AGCD01057113;AGCD01057114;AGCD01057115;AGCD01057116;GBDF01089520;XM_005402854;XM_005402855;XM_005402858;XM_005402862 XP_005402911;XP_005402912;XP_005402915;XP_005402919 MODEL 9036095 protein-coding LOC102011568 olfactory receptor 1013-like NW_004955511 1833015 1833950 + 102011568 AGCD01066381;XM_005407979 XP_005408036 MODEL 8981871 protein-coding LOC102016216 late cornified envelope protein 3B-like NW_004955592 850418 870805 + 102016216 AGCD01076331;AGCD01076332;AGCD01076333;GBDI01000487;XM_005414627;XM_013509980 XP_005414684;XP_013365434 MODEL 10220341 protein-coding LOC106147408 vegetative cell wall protein gp1-like NW_004955555 2419604 2421477 + 106147408 AGCD01073152;AGCD01073153;GBCB01007212;XM_013508711 XP_013364165 MODEL 8972225 protein-coding LOC102008052 endogenous retrovirus group K member 21 Rec protein-like NW_004955405 858916 862820 + 102008052 AGCD01004588;GBDF01277735;XM_005374249 XP_005374306 MODEL 8914873 protein-coding Sdr42e2 short chain dehydrogenase/reductase family 42E, member 2 NW_004955493 834582 849058 + 102012210 AGCD01060866;GBDF01294445;XM_005405068 XP_005405125 MODEL 8882409 protein-coding Spryd7 SPRY domain containing 7 ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog) NW_004955431 3303091 3330360 - 102028321 AGCD01029962;GBCB01002524;XM_005387601;XM_013515781 XP_005387658;XP_013371235 MODEL 8929991 pseudo LOC102009965 high mobility group nucleosome-binding domain-containing protein 3 pseudogene NW_004955497 1469748 1473082 - 102009965 AGCD01062462;XM_005406365 MODEL 8976032 pseudo LOC102006141 BAG family molecular chaperone regulator 5-like NW_004955492 7211744 7213061 + 102006141 AGCD01060779 MODEL 8726863 pseudo LOC102018153 protein phosphatase 1A pseudogene NW_004955405 7689040 7690265 - 102018153 AGCD01004721 MODEL 8877012 pseudo LOC102005786 transcription elongation factor B polypeptide 1 pseudogene NW_004955412 19308345 19308746 + 102005786 AGCD01012950;XM_005378228 MODEL 8953327 protein-coding Spag5 sperm associated antigen 5 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN chromosome segregation (ortholog); establishment of spindle orientation (ortholog); mitotic sister chromatid segregation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); ciliary rootlet (ortholog) NW_004955481 4558748 4576320 + 102029625 AGCD01056944;GBDF01004685;XM_005402745;XM_005402746 XP_005402802;XP_005402803 MODEL 9005279 protein-coding Plcg1 phospholipase C gamma 1 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); glutamate receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN calcium ion transport (ortholog); calcium-mediated signaling (ortholog); cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN cell-cell junction (ortholog); clathrin-coated vesicle (ortholog); COP9 signalosome (ortholog) NW_004955445 15787496 15823859 - 102004432 AGCD01039855;AGCD01039856;GBCE01077323;GBDF01085611;XM_005392520 XP_005392577 MODEL 9018113 protein-coding Trim8 tripartite motif containing 8 ENCODES a protein that exhibits identical protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); canonical NF-kappaB signal transduction (ortholog); host-mediated suppression of symbiont invasion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); epilepsy (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955485 7784625 7798131 - 102013832 AGCD01058676;AGCD01058677;AGCD01058678;GBBH01035373;GBDK01003830;XM_005403830 XP_005403887 MODEL 8873907 protein-coding LOC102019362 low affinity sodium-glucose cotransporter-like NW_004955455 6325614 6404676 - 102019362 AGCD01045787;AGCD01045788;AGCD01045789;AGCD01045790;AGCD01045791;AGCD01045792;GBDI01239871;XM_005396351;XM_005396352 XP_005396408;XP_005396409 MODEL 8708381 pseudo LOC102010762 RNA-binding protein 3 pseudogene NW_004955403 33567014 33567530 + 102010762 AGCD01002457 MODEL 9035468 protein-coding Slc29a1 solute carrier family 29 member 1 (Augustine blood group) ENCODES a protein that exhibits adenine transmembrane transporter activity (ortholog); cytidine transmembrane transporter activity (ortholog); guanine transmembrane transporter activity (ortholog); INVOLVED IN adenine transport (ortholog); adenosine transport (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; gemcitabine pharmacodynamics pathway; gemcitabine pharmacokinetics pathway; ASSOCIATED WITH alcohol dependence (ortholog); Alcohol Withdrawal Seizures (ortholog); Animal Disease Models (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955437 9850279 9862412 + 102018977 AGCD01034547;AGCD01034548;GBCE01034310;XM_005389803;XM_005389804;XM_005389805;XM_005389807 XP_005389860;XP_005389861;XP_005389862;XP_005389864 MODEL 730469438 snorna SNORA44 Small nucleolar RNA SNORA44 9052250 protein-coding Rbm19 RNA binding motif protein 19 INVOLVED IN positive regulation of embryonic development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955482 9930237 10032597 - 102019807 AGCD01057586;AGCD01057587;GBDI01262719;XM_005403230;XM_013503702 XP_005403287;XP_013359156 MODEL 8772304 protein-coding Prr29 proline rich 29 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955478 7851993 7857147 - 102016705 AGCD01055998;GBBH01063008;XM_013503227;XM_013503228 XP_013358681;XP_013358682 MODEL 9037858 protein-coding LOC102022264 wiskott-Aldrich syndrome protein homolog 1-like NW_004955464 129260 133199 + 102022264 AGCD01049927;GBDF01178309;XM_005398768 XP_005398825 MODEL 8836550 protein-coding Ppdpfl pancreatic progenitor cell differentiation and proliferation factor like ASSOCIATED WITH lung cancer (ortholog) NW_004955454 8902630 8907721 + 102025977 AGCD01045328;GBCB01001157;XM_005396047 XP_005396104 MODEL 10249378 ncrna LOC106150308 uncharacterized LOC106150308 NW_004955471 5566 6321 - 106150308 AGCD01052945;GBDK01379019;XR_001237044 MODEL 8899332 protein-coding Thop1 thimet oligopeptidase 1 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); peptidase activity (ortholog); peptide binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); peptide catabolic process (ortholog); peptide metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955495 5055389 5070710 + 102019711 AGCD01061973;GBDF01128633;XM_005405835 XP_005405892 MODEL 9045189 protein-coding Rnf5 ring finger protein 5 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of autophagy (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955437 643133 645528 + 102012022 AGCD01034152;GBDF01124016;XM_005389421;XM_013516939 XP_005389478;XP_013372393 MODEL 8836136 protein-coding Pnpla2 patatin like domain 2, triacylglycerol lipase ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); acylglycerol O-acyltransferase activity (ortholog); diolein transacylation activity (ortholog); INVOLVED IN diacylglycerol biosynthetic process (ortholog); intracellular triglyceride homeostasis (ortholog); lipid catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Chanarin-Dorfman syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955476 11304660 11309755 - 102009048 AGCD01055448;AGCD01055449;GBCB01003982;GBDI01017656;XM_005401809 XP_005401866 MODEL 9042449 protein-coding LOC102011137 olfactory receptor 4D11-like NW_004955511 4022531 4023466 + 102011137 AGCD01066488;XM_013506353 XP_013361807 MODEL 9041840 protein-coding Rita1 RBPJ interacting and tubulin associated 1 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); nuclear export (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955482 9510070 9514118 + 102014249 AGCD01057574;GBDI01294672;XM_005403213 XP_005403270 MODEL 8724002 protein-coding Btbd1 BTB domain containing 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Delayed Emergence from Anesthesia (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) NW_004955416 13621343 13657276 + 102011986 AGCD01017229;GBDF01004869;XM_013512487 XP_013367941 MODEL 9065673 protein-coding Ptchd1 patched domain containing 1 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cognition (ortholog); excitatory chemical synaptic transmission (ortholog); inhibitory chemical synaptic transmission (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN dendritic spine (ortholog); plasma membrane (ortholog); synapse (ortholog) NW_004955509 3716086 3767541 + 102013108 AGCD01066032;AGCD01066033;GBCE01090342;XM_005407829 XP_005407886 MODEL 8989982 protein-coding Tpd52 tumor protein D52 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN B cell differentiation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Neoplasm Recurrence, Local (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog) NW_004955444 1230730 1261839 + 102011058 AGCD01038717;AGCD01038718;GBDF01082643;XM_005392060;XM_005392062;XM_005392063;XM_013518179 XP_005392117;XP_005392119;XP_005392120;XP_013373633 MODEL 8993656 ncrna LOC102019739 uncharacterized LOC102019739 NW_004955545 2273149 2281175 - 102019739 AGCD01071893;AGCD01071894;GBDK01416812;XR_264874 MODEL 8902202 protein-coding LOC102004721 UDP-N-acetylglucosamine transferase subunit ALG13 homolog NW_004955493 8103019 8104261 - 102004721 AGCD01061265;GBDF01238027;XM_005405313 XP_005405370 MODEL 8862066 ncrna LOC102005411 uncharacterized LOC102005411 NW_004955435 20027434 20045778 - 102005411 AGCD01033445;GBDF01117536;XR_261728 MODEL 39132988 snrna U1 U1 spliceosomal RNA 730469256 snorna SNORA11 Small nucleolar RNA SNORA11 8948003 pseudo LOC102007260 glutaredoxin-2, mitochondrial pseudogene NW_004955430 13298152 13298519 - 102007260 AGCD01029530 MODEL 8812029 pseudo LOC102013163 olfactory receptor 52B4-like NW_004955414 20049525 20050458 + 102013163 AGCD01015354 MODEL 8788322 ncrna LOC102003977 uncharacterized LOC102003977 NW_004955492 6357508 6415069 - 102003977 AGCD01060766;GBCQ01139758;XR_264056;XR_264057 MODEL 41410891 protein-coding PIGZ phosphatidylinositol glycan anchor biosynthesis class Z 8813800 protein-coding Rps25 ribosomal protein S25 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); ribosomal small subunit assembly (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955412 20126769 20129071 - 102021222 AGCD01012994;GBDF01002544;XM_005378285 XP_005378342 MODEL 9030768 protein-coding Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 ENCODES a protein that exhibits RNA binding (ortholog); U1 snRNA binding (ortholog); U1 snRNP binding (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN lysosomal lumen (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955559 1618246 1634144 - 102024057 AGCD01073654;GBDF01045469;XM_005412908;XM_005412911 XP_005412965;XP_005412968 MODEL 39133292 snrna U4 U4 spliceosomal RNA 730469501 snorna SNORA28 Small nucleolar RNA SNORA28 39131977 snorna SNORD31 Small nucleolar RNA SNORD31 8733024 protein-coding LOC102011570 olfactory receptor 10AG1-like NW_004955511 924080 925039 - 102011570 AGCD01066346;XM_005408218 XP_005408275 MODEL 8725840 protein-coding Serpini2 serpin family I member 2 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); lung cancer (ortholog) NW_004955448 16679885 16694484 - 102027247 AGCD01041701;GBBH01104730;XM_005393166 XP_005393223 MODEL 8833280 protein-coding Eny2 ENY2 transcription and export complex 2 subunit ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); poly(A)+ mRNA export from nucleus (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN DUBm complex (ortholog); nuclear pore nuclear basket (ortholog); SAGA complex (ortholog) NW_004955417 16750563 16760839 + 102022081 AGCD01018273;GBDF01088991;XM_005381877;XM_005381878 XP_005381934;XP_005381935 MODEL 8906960 protein-coding LOC102008062 keratin-associated protein 10-10-like NW_004955407 41537601 41546262 - 102008062 AGCD01007870;XM_013505443 XP_013360897 MODEL 9026467 protein-coding LOC102009968 translation initiation factor IF-2-like NW_004955426 21666851 21667753 - 102009968 AGCD01026595;XM_005386266 XP_005386323 MODEL 9033835 protein-coding Rad51d RAD51 paralog D ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); ATP-dependent DNA damage sensor activity (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN chromosome organization (ortholog); DNA damage response (ortholog); DNA strand invasion (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH breast cancer (ortholog); Chromosome Deletion (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN centrosome (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955481 9795102 9810426 - 102011205 AGCD01057117;AGCD01057118;GBDK01318937;XM_005402864;XM_005402867;XM_013503403 XP_005402921;XP_005402924;XP_013358857 MODEL 39132071 snorna SNORA72 Small nucleolar RNA SNORA72 8810579 protein-coding LOC102016218 serum albumin-like NW_004955402 63514382 63519795 + 102016218 AGCD01001675;AGCD01001676;GBCE01018604;GBDK01185460;XM_013512233 XP_013367687 MODEL 8966970 protein-coding Prdm11 PR/SET domain 11 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955422 2616410 2655381 - 102021354 AGCD01022487;AGCD01022488;GBCE01108537;XM_005384073 XP_005384130 MODEL 8786384 protein-coding Lnpk lunapark, ER junction formation factor ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blood coagulation (ortholog); embryonic digit morphogenesis (ortholog); embryonic forelimb morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network membrane (ortholog) NW_004955403 20654961 20728173 + 102012266 AGCD01002171;GBDF01144184;XM_005373417;XM_005373418;XM_013512809;XM_013512812;XM_013512816;XM_013512822 XP_005373474;XP_005373475;XP_013368263;XP_013368266;XP_013368270;XP_013368276 MODEL 9016046 pseudo LOC102008438 CDC42 small effector protein 1 pseudogene NW_004955503 2028864 2063030 - 102008438 AGCD01064593;AGCD01064594 MODEL 8752355 pseudo LOC102010765 protein FAM133B pseudogene NW_004955405 3393161 3394490 + 102010765 AGCD01004634 MODEL 8992611 protein-coding Vwa5b1 von Willebrand factor A domain containing 5B1 ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lymphoma (ortholog) NW_004955452 874819 938134 + 102018677 AGCD01043828;GBDK01400521;XM_005394679;XM_013519734;XM_013519735 XP_005394736;XP_013375188;XP_013375189 MODEL 8893865 protein-coding Sdr9c7 short chain dehydrogenase/reductase family 9C member 7 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 13 (ortholog); genetic disease (ortholog) NW_004955458 4538113 4551586 - 102015928 AGCD01047418;GBCC01015389;XM_005397333 XP_005397390 MODEL 8814779 protein-coding Rfk riboflavin kinase ENCODES a protein that exhibits riboflavin kinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); reactive oxygen species metabolic process (ortholog); riboflavin metabolic process (ortholog); PARTICIPATES IN riboflavin metabolic pathway; ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Prostatic Neoplasms (ortholog); stomach cancer (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) NW_004955512 2889265 2898195 + 102029315 AGCD01066691;AGCD01066692;GBBH01065333;GBDF01001741;XM_005408308 XP_005408365 MODEL 8904492 ncrna LOC102006143 uncharacterized LOC102006143 NW_004955493 8176730 8196458 - 102006143 AGCD01061275;AGCD01061276;AGCD01061277;AGCD01061278;AGCD01061279;AGCD01061280;GBDK01245153;XR_001231286;XR_001231287;XR_264097 MODEL 10257704 ncrna LOC106147409 uncharacterized LOC106147409 NW_004955555 2434079 2440302 - 106147409 AGCD01073153;AGCD01073154;XR_001232304 MODEL 8890791 pseudo LOC102018158 nascent polypeptide-associated complex subunit alpha-like NW_004955455 10593876 10627433 + 102018158 AGCD01045958;AGCD01045959 MODEL 8777928 protein-coding Spag6 sperm associated antigen 6 ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axoneme (ortholog); microtubule cytoskeleton (ortholog); sperm end piece (ortholog) NW_004955429 625601 662804 - 102024259 AGCD01028369;GBDI01128056;XM_005386859;XM_005386860;XM_013515392 XP_005386916;XP_005386917;XP_013370846 MODEL 8778323 protein-coding LOC102011979 protein unc-13 homolog B NW_004955472 869993 1019542 - 102011979 AGCD01053364;AGCD01053365;AGCD01053366;AGCD01053367;GBDF01156325;GBDK01081960;XM_013522964;XM_013522965;XM_013522966;XM_013522967 XP_013378418;XP_013378419;XP_013378420;XP_013378421 MODEL 8805275 protein-coding LOC102019365 A-kinase anchor protein 5-like NW_004955408 12165200 12166481 + 102019365 AGCD01008329;XM_013508842 XP_013364296 MODEL 8965296 protein-coding Slc29a2 solute carrier family 29 member 2 ENCODES a protein that exhibits adenine transmembrane transporter activity (ortholog); cytidine transmembrane transporter activity (ortholog); guanine transmembrane transporter activity (ortholog); INVOLVED IN adenine transport (ortholog); adenosine transport (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955422 18960862 18970312 + 102012443 AGCD01022969;GBBH01177502;XM_005384407 XP_005384464 MODEL 730469474 snorna SNORA44 Small nucleolar RNA SNORA44 8991919 protein-coding Spsb1 splA/ryanodine receptor domain and SOCS box containing 1 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955486 4022307 4061111 - 102022195 AGCD01059051;GBCE01040744;XM_005404039;XM_005404040;XM_005404041;XM_005404042 XP_005404096;XP_005404097;XP_005404098;XP_005404099 MODEL 8724873 protein-coding Pgbdf plakoglobin binding and degradation factor FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955481 10202477 10206606 + 102018728 AGCD01057138;GBDK01256624;XM_005402884 XP_005402941 MODEL 8843691 protein-coding LOC102005787 olfactory receptor 147-like NW_004955412 25191307 25192245 + 102005787 AGCD01013140;XM_005378415 XP_005378472 MODEL 8881358 protein-coding Trim9 tripartite motif containing 9 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein homodimerization activity (ortholog); SNARE binding (ortholog); INVOLVED IN negative regulation of calcium ion-dependent exocytosis (ortholog); negative regulation of dense core granule exocytosis (ortholog); negative regulation of SNARE complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); dendrite (ortholog) NW_004955409 11837717 11946718 + 102015811 AGCD01009529;AGCD01009530;GBDF01209690;XM_005376796;XM_005376797;XM_005376798;XM_005376799;XM_005376802;XM_013510331 XP_005376853;XP_005376854;XP_005376855;XP_005376856;XP_005376859;XP_013365785 MODEL 8814984 protein-coding Ppef1 protein phosphatase with EF-hand domain 1 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); high grade glioma (ortholog); lung cancer (ortholog) NW_004955586 597620 761433 - 102007831 AGCD01076035;AGCD01076036;AGCD01076037;AGCD01076038;AGCD01076039;AGCD01076040;AGCD01076041;AGCD01076042;AGCD01076043;AGCD01076044;GBDF01194348;XM_005414441;XM_013509899;XM_013509900;XM_013509901 XP_005414498;XP_013365353;XP_013365354;XP_013365355 MODEL 8883291 protein-coding LOC102022265 uncharacterized LOC102022265 NW_004955411 32126496 32186689 - 102022265 AGCD01012294;GBDF01163027;XM_005377941 XP_005377998 MODEL 8709179 protein-coding Plcg2 phospholipase C gamma 2 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); phosphorylation-dependent protein binding (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN antifungal innate immune response (ortholog); B cell activation (ortholog); B cell differentiation (ortholog); PARTICIPATES IN erythropoietin signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Alzheimer's disease (ortholog); anxiety disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intracellular vesicle (ortholog) NW_004955522 4352890 4480735 + 102007928 AGCD01068416;AGCD01068417;AGCD01068418;AGCD01068419;AGCD01068420;AGCD01068421;AGCD01068422;GBCE01092331;GBDJ01422643;XM_013507097 XP_013362551 MODEL 9044312 protein-coding LOC102008819 glutathione S-transferase theta-4-like NW_004955455 8339972 8366449 - 102008819 AGCD01045887;AGCD01045888;GBBH01060604;XM_005396410;XM_005396411;XM_005396412;XM_013520443 XP_005396467;XP_005396468;XP_005396469;XP_013375897 MODEL 8892214 protein-coding Rbm20 RNA binding motif protein 20 ENCODES a protein that exhibits pre-mRNA intronic binding (ortholog); RNA binding (ortholog); splicing factor binding (ortholog); INVOLVED IN heart formation (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); positive regulation of RNA splicing (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); asthma (ortholog); atrial fibrillation (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nucleus (ortholog) NW_004955485 590094 769604 - 102014785 AGCD01058456;AGCD01058457;GBCB01023246;XM_005403751;XM_005403752;XM_005403753;XM_013504116 XP_005403808;XP_005403809;XP_005403810;XP_013359570 MODEL 8944716 protein-coding Prr3 proline rich 3 ASSOCIATED WITH cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); esophageal cancer (ortholog) NW_004955583 580630 584418 + 102015677 AGCD01075840;GBBH01187837;GBCQ01153159;XM_013509795;XR_001232500 XP_013365249 MODEL 9011051 pseudo LOC102011574 polyadenylate-binding protein 1 pseudogene NW_004955516 4984024 4988135 + 102011574 AGCD01067543 MODEL 8920897 protein-coding Sertad1 SERTA domain containing 1 INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955578 848920 852193 + 102012705 AGCD01075500;GBDF01188769;XM_005414046;XM_013509664 XP_005414103;XP_013365118 MODEL 9060925 protein-coding Thpo thrombopoietin ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); megakaryocyte development (ortholog); megakaryocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriosclerosis obliterans (ortholog); cardiomyopathy (ortholog); FOUND IN extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955420 23120828 23128894 + 102017242 AGCD01021227;AGCD01021228;GBDJ01109659;XM_005383308;XM_005383309;XM_005383310;XM_013513327;XM_013513328;XM_013513329 XP_005383365;XP_005383366;XP_005383367;XP_013368781;XP_013368782;XP_013368783 MODEL 8719785 pseudo LOC102008440 high mobility group protein B1-like NW_004955427 3052920 3061332 - 102008440 AGCD01026912 MODEL 8928448 protein-coding LOC102005416 complement C4-A NW_004955437 492806 505554 + 102005416 AGCD01034137;AGCD01034138;GBCE01002333;XM_013516778 XP_013372232 MODEL 8996910 protein-coding Tpd52l1 TPD52 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); positive regulation of apoptotic signaling pathway (ortholog); positive regulation of JNK cascade (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955436 6648140 6672474 + 102027674 AGCD01033691;GBCE01154531;GBDI01175773;XM_013516685 XP_013372139 MODEL 8785435 protein-coding Rnf6 ring finger protein 6 ENCODES a protein that exhibits DNA binding (ortholog); nuclear androgen receptor binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of axon extension (ortholog); positive regulation of DNA-templated transcription (ortholog); protein K27-linked ubiquitination (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); Esophageal Neoplasms (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); nuclear membrane (ortholog) NW_004955497 5744485 5754728 - 102026022 AGCD01062612;AGCD01062613;GBCB01057017;GBDJ01280068;XM_005406342 XP_005406399 MODEL 8750352 protein-coding LOC102009970 olfactory receptor 5M10-like NW_004955511 1738489 1739436 + 102009970 AGCD01066378;XM_005407975 XP_005408032 MODEL 8933342 pseudo LOC102019740 mediator of RNA polymerase II transcription subunit 28 pseudogene NW_004955547 1567815 1568355 - 102019740 AGCD01072233 MODEL 730469265 snorna SNORA11 Small nucleolar RNA SNORA11 8826414 protein-coding Ptchd3 patched domain containing 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); sperm midpiece (ortholog) NW_004955476 11870822 11895903 - 102004160 AGCD01055475;GBDF01052329;XM_005401894 XP_005401951 MODEL 8981012 protein-coding Btbd10 BTB domain containing 10 INVOLVED IN positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955414 28748835 28809735 - 102017326 AGCD01015685;AGCD01015686;AGCD01015687;AGCD01015688;GBDJ01314884;XM_005380310;XM_005380311;XM_005380313 XP_005380367;XP_005380368;XP_005380370 MODEL 8716170 pseudo LOC102011138 mitochondrial calcium uniporter regulator 1 pseudogene NW_004955430 1898687 1900786 - 102011138 AGCD01029142 MODEL 39133294 snrna U4 U4 spliceosomal RNA 8855937 protein-coding Snrpa small nuclear ribonucleoprotein polypeptide A ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); RNA binding (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); precatalytic spliceosome (ortholog); spliceosomal complex (ortholog) NW_004955578 579087 590010 - 102006181 AGCD01075489;GBCQ01041725;XM_005414022;XM_005414023 XP_005414079;XP_005414080 MODEL 8965540 protein-coding Pnpla3 patatin like domain 3, 1-acylglycerol-3-phosphate O-acyltransferase ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); A2-type glycerophospholipase activity (ortholog); diolein transacylation activity (ortholog); INVOLVED IN cellular response to 3,3',5-triiodo-L-thyronine (ortholog); cellular response to insulin stimulus (ortholog); glycerophospholipid metabolic process (ortholog); ASSOCIATED WITH alcohol-associated liver disease (ortholog); alcoholic liver cirrhosis (ortholog); anxiety disorder (ortholog); FOUND IN lipid droplet (ortholog); membrane (ortholog) NW_004955413 28879646 28896224 + 102019902 AGCD01014572;GBDK01116835;XM_005379450;XM_005379451 XP_005379507;XP_005379508 MODEL 10287377 pseudo LOC106150309 60S ribosomal protein L21-like NW_004955471 7170758 7171236 - 106150309 AGCD01053140 MODEL 39132287 snorna SNORD33 Small nucleolar RNA Z195/SNORD33/SNORD32 family 39132990 snrna U1 U1 spliceosomal RNA 8721736 ncrna LOC102007261 uncharacterized LOC102007261 NW_004955431 18572768 18575376 - 102007261 AGCD01030431;XR_261488 MODEL 8990314 protein-coding Prdm12 PR/SET domain 12 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN detection of temperature stimulus involved in sensory perception of pain (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); neurogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Congenital Pain Insensitivity (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleus (ortholog) NW_004955513 612566 627848 + 102021268 AGCD01066827;AGCD01066828;GBDF01167611;XM_005408635 XP_005408692 MODEL 9013400 protein-coding Pgc progastricsin ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); INVOLVED IN positive regulation of antibacterial peptide production (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955437 8142523 8153044 - 102015240 AGCD01034479;GBDJ01263197;XM_005389695 XP_005389752 MODEL 8981881 protein-coding LOC102016221 amine oxidase [flavin-containing] B-like NW_004955832 1753 14560 + 102016221 AGCD01078449;GBCE01162221;XM_005415126 XP_005415183 MODEL 8701528 protein-coding Rlbp1 retinaldehyde binding protein 1 ENCODES a protein that exhibits 11-cis retinal binding (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); Bothnia retinal dystrophy (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cell body (ortholog); cytosol (ortholog) NW_004955416 15862510 15873261 + 102003653 AGCD01017346;GBDF01112309;XM_005381557;XM_005381558;XM_005381559 XP_005381614;XP_005381615;XP_005381616 MODEL 8873501 protein-coding LOC102003981 cytochrome P450 4F6-like NW_004955495 7714402 7725532 - 102003981 AGCD01062160;GBDF01159203;XM_005406063;XM_013505320;XM_013505321 XP_005406120;XP_013360774;XP_013360775 MODEL 9066218 pseudo LOC102010772 protein FRG1 pseudogene NW_004955407 27229926 27230701 - 102010772 AGCD01007548 MODEL 8989147 protein-coding Lnx1 ligand of numb-protein X 1 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN synapse maturation (ortholog); ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955447 17154026 17265067 + 102010749 AGCD01041114;AGCD01041115;AGCD01041116;GBBH01019203;XM_005392901;XM_005392902;XM_005392903;XM_013518520 XP_005392958;XP_005392959;XP_005392960;XP_013373974 MODEL 8771073 protein-coding Rad52 RAD52 DNA repair protein ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); DNA double-strand break processing involved in repair via single-strand annealing (ortholog); DNA recombination (ortholog); ASSOCIATED WITH adrenocortical carcinoma (ortholog); Breast Cancer, Familial (ortholog); colon cancer (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog); protein-DNA complex (ortholog) NW_004955454 6206195 6227859 + 102011082 AGCD01045225;GBDI01263386;XM_005396004;XM_005396005;XM_005396006;XM_005396007;XM_005396008;XM_005396009;XM_013520158;XM_013520160;XM_013520161 XP_005396061;XP_005396062;XP_005396063;XP_005396064;XP_005396065;XP_005396066;XP_013375612;XP_013375614;XP_013375615 MODEL 8767068 protein-coding Pih1d1 PIH1 domain containing 1 ENCODES a protein that exhibits ATPase binding (ortholog); histone binding (ortholog); histone reader activity (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog); chromatin remodeling (ortholog); epithelial cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955559 1390823 1395550 + 102015464 AGCD01073642;GBDI01019068;XM_005412877;XM_005412878;XM_005412879;XM_005412881;XM_013509019 XP_005412934;XP_005412935;XP_005412936;XP_005412938;XP_013364473 MODEL 8700836 protein-coding Rps26 ribosomal protein S26 ENCODES a protein that exhibits mRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); negative regulation of RNA splicing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH anemia (ortholog); congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955458 3632675 3634565 + 102028616 AGCD01047328;AY533229;GBCB01007464;GBDJ01017907;XM_005415267 AAS59431;XP_005415324 MODEL 8767572 protein-coding Vwa5b2 von Willebrand factor A domain containing 5B2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955420 23243197 23253202 - 102029752 AGCD01021238;GBCQ01177082;GBCQ01177083;XM_013513358;XM_013513359 XP_013368812;XP_013368813 MODEL 8773276 protein-coding LOC102018160 olfactory receptor 6C70-like NW_004955458 3167363 3168304 + 102018160 AGCD01047276;XM_013520812 XP_013376266 MODEL 9031049 ncrna LOC102008064 uncharacterized LOC102008064 NW_004955408 4366570 4372625 + 102008064 AGCD01008109;GBDF01296436;XR_001231915;XR_001231916;XR_001231917;XR_001231918;XR_259659 MODEL 8807441 protein-coding LOC102011983 cystatin-9-like NW_004955415 30490600 30492806 - 102011983 AGCD01016664;GBDF01134641;XM_013512168 XP_013367622 MODEL 8931047 protein-coding Rflnb refilin B ENCODES a protein that exhibits filamin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle organization (ortholog); epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH cholestasis (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament bundle (ortholog) NW_004955481 2102576 2107947 - 102006457 AGCD01056866;GBCB01008384;GBDK01281227;XM_013503522 XP_013358976 MODEL 8950268 protein-coding LOC102022268 protoheme IX farnesyltransferase, mitochondrial ENCODES a protein that exhibits geranylgeranyl diphosphate synthase activity (ortholog); protoheme IX farnesyltransferase activity (ortholog); INVOLVED IN aerobic respiration (ortholog); copper ion homeostasis (ortholog); cytochrome complex assembly (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; hereditary coproporphyria pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytochrome complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955467 3294200 3415778 - 102022268 AGCD01051332;GBDF01052173;XM_005399336 XP_005399393 MODEL 9002490 ncrna LOC102019366 uncharacterized LOC102019366 NW_004955460 4440981 4449248 + 102019366 AGCD01048434;AGCD01048435;GBDF01155457;XR_263027 MODEL 8774922 protein-coding LOC102004723 maltase-glucoamylase, intestinal NW_004955494 1407172 1645558 - 102004723 AGCD01061397;AGCD01061398;AGCD01061399;AGCD01061400;AGCD01061401;AGCD01061402;AGCD01061403;AGCD01061404;AGCD01061405;AGCD01061406;AGCD01061407;AGCD01061408;AGCD01061409;AGCD01061410;AGCD01061411;AGCD01061412;AGCD01061413;AGCD01061414;AGCD01061415;AGCD01061416;AGCD01061417;AGCD01061418;AGCD01061419;GBCQ01114150;GBDK01228223;XM_013505005 XP_013360459 MODEL 730469175 snorna SNORA44 Small nucleolar RNA SNORA44 41410898 snorna SNORA28 Small nucleolar RNA SNORA28 39132074 snorna SNORA72 Small nucleolar RNA SNORA72 8963933 protein-coding Spsb2 splA/ryanodine receptor domain and SOCS box containing 2 NW_004955413 4471696 4474282 - 102005580 AGCD01013617;GBCQ01008854;XM_005378837;XM_013511345 XP_005378894;XP_013366799 MODEL 8933676 protein-coding Pnpla4 patatin like domain 4, phospholipase and triacylglycerol lipase ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); acylglycerol O-acyltransferase activity (ortholog); diolein transacylation activity (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH lung cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955499 5875706 5925809 - 102018307 AGCD01063532;AGCD01063533;GBCQ01151838;XM_005406541;XM_013505580;XM_013505581 XP_005406598;XP_013361034;XP_013361035 MODEL 8968885 protein-coding LOC102013165 vomeronasal type-1 receptor 90-like NW_004955414 15050578 15051507 - 102013165 AGCD01015173;XM_005380443 XP_005380500 MODEL 8733503 ncrna LOC102005792 uncharacterized LOC102005792 NW_004955414 5124870 5149552 - 102005792 AGCD01014888;XR_260153 MODEL 8762910 protein-coding Triml1 tripartite motif family like 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Prostate Cancer (ortholog); lung cancer (ortholog) NW_004955403 21043233 21050261 - 102013678 AGCD01002179;GBDF01054116;XM_005373423;XM_005373424 XP_005373480;XP_005373481 MODEL 8981356 protein-coding Ppef2 protein phosphatase with EF-hand domain 2 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); negative regulation of apoptotic signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955474 1758988 1770427 + 102028528 AGCD01054267;AGCD01054268;GBDF01228178;XM_013523094 XP_013378548 MODEL 8834435 protein-coding Slc29a3 solute carrier family 29 member 3 ENCODES a protein that exhibits cytidine transmembrane transporter activity (ortholog); guanine transmembrane transporter activity (ortholog); monoamine transmembrane transporter activity (ortholog); INVOLVED IN adenosine transport (ortholog); cytidine transport (ortholog); guanine transmembrane transport (ortholog); ASSOCIATED WITH acanthosis nigricans (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Golgi apparatus (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955437 20072915 20108342 - 102007937 AGCD01034869;AGCD01034870;GBDK01324076;XM_005390038;XM_005390039 XP_005390095;XP_005390096 MODEL 10341827 protein-coding LOC106147411 atherin-like NW_004955408 9908864 9989195 + 106147411 AGCD01008259;AGCD01008260;GBCE01162942;GBDF01228059;XM_013508750 XP_013364204 MODEL 8776602 protein-coding Sds serine dehydratase ENCODES a protein that exhibits L-serine ammonia-lyase activity (ortholog); protein homodimerization activity (ortholog); pyridoxal phosphate binding (ortholog); INVOLVED IN L-serine catabolic process (ortholog); protein-containing complex assembly (ortholog); pyruvate biosynthetic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955482 9646523 9653471 - 102017661 AGCD01057578;GBDF01049073;XM_005403224;XM_005403225 XP_005403281;XP_005403282 MODEL 9055542 ncrna LOC102006144 uncharacterized LOC102006144 NW_004955494 945399 951856 - 102006144 AGCD01061388;GBBH01099440;XR_001231328;XR_001231329;XR_001231330 MODEL 8794011 ncrna LOC102011575 uncharacterized LOC102011575 NW_004955433 7112388 7165573 + 102011575 AGCD01031565;AGCD01031566;GBDF01115735;XR_001234705;XR_261564 MODEL 8762395 protein-coding Prr30 proline rich 30 NW_004955469 9103132 9105680 - 102022182 AGCD01052490;GBDK01061542;XM_005400462 XP_005400519 MODEL 8961756 protein-coding Sertad2 SERTA domain containing 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955424 19683745 19797889 + 102007134 AGCD01024833;AGCD01024834;AGCD01024835;AGCD01024836;AGCD01024837;GBDK01430460;XM_005385696;XM_005385698 XP_005385753;XP_005385755 MODEL 8772237 protein-coding Thra thyroid hormone receptor alpha ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adrenal gland development (ortholog); animal organ morphogenesis (ortholog); cartilage condensation (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955451 14731746 14743545 + 102009675 AGCD01043569;AGCD01043570;GBCB01002160;XM_005394347 XP_005394404 MODEL 9041808 protein-coding Eogt EGF domain specific O-linked N-acetylglucosamine transferase ENCODES a protein that exhibits protein O-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 4 (ortholog) NW_004955421 18845626 18879008 + 102013835 AGCD01022058;AGCD01022059;GBDJ01390366;XM_005383814;XM_005383815;XM_013513795 XP_005383871;XP_005383872;XP_013369249 MODEL 8916684 protein-coding Plch1 phospholipase C eta 1 ENCODES a protein that exhibits lysophospholipase C activity (ortholog); phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN phosphatidylinositol-mediated signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955448 6588885 6815087 - 102015257 AGCD01041393;GBDJ01114723;XM_005393067;XM_013518675;XM_013518676;XM_013518677 XP_005393124;XP_013374129;XP_013374130;XP_013374131 MODEL 730469105 snorna SNORA11 Small nucleolar RNA SNORA11 9064460 protein-coding Rbm22 RNA binding motif protein 22 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); pre-mRNA binding (ortholog); U6 snRNA binding (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); mRNA cis splicing, via spliceosome (ortholog); positive regulation of protein export from nucleus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955415 3895272 3905801 + 102013500 AGCD01015958;GBDF01084793;XM_005380568 XP_005380625 MODEL 9068179 protein-coding Btbd16 BTB domain containing 16 ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955477 560095 627017 + 102019167 AGCD01055492;GBDF01047392;XM_005401934;XM_013503026;XM_013503027 XP_005401991;XP_013358480;XP_013358481 MODEL 8945604 protein-coding LOC102005424 trafficking protein particle complex subunit 6A NW_004955555 2169073 2183696 - 102005424 AGCD01073131;GBCQ01014265;XM_005412499;XM_005412500;XM_005412502;XM_013508760;XM_013508761;XM_013508762;XM_013508763 XP_005412556;XP_005412557;XP_005412559;XP_013364214;XP_013364215;XP_013364216;XP_013364217 MODEL 10095887 protein-coding LOC102008821 uncharacterized LOC102008821 NW_004955455 6620069 6624760 + 102008821 AGCD01045802;XM_013520311 XP_013375765 MODEL 8772561 pseudo LOC102008442 26S proteasome non-ATPase regulatory subunit 14 pseudogene NW_004955428 13615029 13616146 - 102008442 AGCD01027959 MODEL 8829005 protein-coding Rnf7 ring finger protein 7 ENCODES a protein that exhibits cullin family protein binding (ortholog); NEDD8 ligase activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); cerebral cortex radially oriented cell migration (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955508 4001441 4003518 - 102017589 AGCD01065853;GBCB01003681;GBDF01004622;XM_005407754 XP_005407811 MODEL 9003288 pseudo LOC102019742 U6 snRNA-associated Sm-like protein LSm5 pseudogene NW_004955442 5390882 5391207 + 102019742 AGCD01037557 MODEL 8920943 protein-coding Ptchd4 patched domain containing 4 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955437 12253731 12423865 - 102014709 AGCD01034603;AGCD01034604;AGCD01034605;AGCD01034606;AGCD01034607;AGCD01034608;GBDF01162944;XM_005389880 XP_005389937 MODEL 9043643 protein-coding Lnx2 ligand of numb-protein X 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN neural precursor cell proliferation (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955497 6948329 6989455 - 102003984 AGCD01062651;GBCC01024593;XM_005406356 XP_005406413 MODEL 9000862 protein-coding Snrpa1 small nuclear ribonucleoprotein polypeptide A' INVOLVED IN mRNA splicing, via spliceosome (ortholog); spermatogenesis (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); connective tissue disease (ortholog); esophageal cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear body (ortholog); nuclear speck (ortholog) NW_004955416 28166885 28178404 - 102010799 AGCD01017626;GBDJ01141602;XM_005381647 XP_005381704 MODEL 8769645 pseudo LOC102011140 thioredoxin pseudogene NW_004955512 2762023 2762354 - 102011140 AGCD01066685 MODEL 9051765 protein-coding Vwa7 von Willebrand factor A domain containing 7 ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog) NW_004955437 299554 308609 - 102004752 AGCD01034117;AGCD01034118;GBBH01227762;GBDJ01390262;XM_013516802 XP_013372256 MODEL 8809579 protein-coding Tpd52l2 TPD52 like 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955528 371761 389714 - 102028674 AGCD01069526;GBDF01120852;XM_005409929;XM_005409933;XM_005409935;XM_005409939;XM_013507485;XM_013507486 XP_005409986;XP_005409990;XP_005409992;XP_005409996;XP_013362939;XP_013362940 MODEL 39132993 snrna U1 U1 spliceosomal RNA 9049118 protein-coding LOC102009973 olfactory receptor 10AG1-like NW_004955511 872782 873738 - 102009973 AGCD01066345;XM_005408215 XP_005408272 MODEL 730469090 snorna SNORA44 Small nucleolar RNA SNORA44 8738475 protein-coding LOC102010775 olfactory receptor 1468-like NW_004955408 1596483 1597001 + 102010775 AGCD01007966;GBDF01134956;XM_005376562 XP_005376619 MODEL 9055404 protein-coding Spag7 sperm associated antigen 7 ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955467 10369493 10374540 - 102024205 AGCD01051561;GBDF01047089;XM_005399632 XP_005399689 MODEL 8863839 ncrna LOC102007263 uncharacterized LOC102007263 NW_004955432 19290564 19338278 + 102007263 AGCD01031177;AGCD01031178;GBBH01148299;XR_001234678;XR_261536 MODEL 39133297 snrna U4 U4 spliceosomal RNA 8766439 ncrna LOC102016225 uncharacterized LOC102016225 NW_004955404 11945339 11952147 - 102016225 AGCD01003449;GBBH01075036;XR_259302 MODEL 9023469 pseudo LOC102008823 UDP-glucuronosyltransferase 1-8 pseudogene NW_004955407 23170169 23171410 + 102008823 AGCD01007415 MODEL 10181337 protein-coding LOC106150310 small nuclear ribonucleoprotein E-like NW_004955471 4831727 4832005 - 106150310 AGCD01053090;XM_013522872 XP_013378326 MODEL 8768876 pseudo LOC102003982 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 pseudogene NW_004955423 23273272 23274390 + 102003982 AGCD01023999 MODEL 8813197 protein-coding Rad54b RAD54 homolog B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); DNA translocase activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); site of double-strand break (ortholog) NW_004955417 10598295 10685999 - 102026004 AGCD01018081;AGCD01018082;AGCD01018083;AGCD01018084;AGCD01018085;AGCD01018086;GBCQ01115191;XM_013512842 XP_013368296 MODEL 8849915 ncrna LOC102011577 uncharacterized LOC102011577 NW_004955521 1595235 1596832 - 102011577 AGCD01068190;GBDF01280804;XR_264603 MODEL 8894783 ncrna LOC102018165 uncharacterized LOC102018165 NW_004955409 31850420 31855944 - 102018165 AGCD01010341;AGCD01010342;GBDF01146276;XR_259800 MODEL 9045982 pseudo LOC102011985 mitochondrial import inner membrane translocase subunit Tim8 B pseudogene NW_004955416 17979253 17979575 - 102011985 AGCD01017393 MODEL 39132289 snorna SNORD33 Small nucleolar RNA Z195/SNORD33/SNORD32 family 8830875 protein-coding Rfng RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase ENCODES a protein that exhibits O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); positive regulation of Notch signaling pathway (ortholog); regulation of Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955506 1110146 1113130 + 102022207 AGCD01065245;AGCD01065246;GBBH01119203;GBBH01119219;XM_005407503 XP_005407560 MODEL 8907376 protein-coding LOC102022273 antigen-presenting glycoprotein CD1d NW_004955468 9996455 9999630 + 102022273 AGCD01052065;GBDF01277360;XM_005400140 XP_005400197 MODEL 8803441 protein-coding Rlf RLF zinc finger ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN negative regulation of heterochromatin formation (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955452 17588066 17687553 + 102005439 AGCD01044561;AGCD01044562;AGCD01044563;AGCD01044564;AGCD01044565;AGCD01044566;AGCD01044567;AGCD01044568;AGCD01044569;AGCD01044570;AGCD01044571;AGCD01044572;GBDF01188771;XM_005395279;XM_013519549 XP_005395336;XP_013375003 MODEL 39132076 snorna SNORA72 Small nucleolar RNA SNORA72 9018754 protein-coding Sertad3 SERTA domain containing 3 INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleus (ortholog) NW_004955578 837686 841561 + 102012380 AGCD01075499;GBDF01122108;XM_005414045 XP_005414102 MODEL 8816820 protein-coding Spsb3 splA/ryanodine receptor domain and SOCS box containing 3 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of cGAS/STING signaling pathway (ortholog); negative regulation of epithelial to mesenchymal transition (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); nucleus (ortholog) NW_004955442 15486845 15493422 + 102020723 AGCD01037875;GBBH01143805;XM_005391518;XM_005391520;XM_005391521;XM_005391522;XM_005391523 XP_005391575;XP_005391577;XP_005391578;XP_005391579;XP_005391580 MODEL 8762905 ncrna LOC102013168 uncharacterized LOC102013168 NW_004955415 32943857 32949925 - 102013168 AGCD01016743;GBDF01193091;XR_260338 MODEL 8940065 ncrna LOC102005793 uncharacterized LOC102005793 NW_004955470 11386077 11391036 - 102005793 AGCD01052887;GBDF01224584;XR_001237001;XR_263503 MODEL 8867395 protein-coding Pnpla5 patatin like domain 5, triacylglycerol lipase ENCODES a protein that exhibits triacylglycerol lipase activity (ortholog); ASSOCIATED WITH uterine carcinosarcoma (ortholog) NW_004955413 28825673 28835476 - 102019159 AGCD01014568;GBDJ01219176;XM_005379447;XM_005379449 XP_005379504;XP_005379506 MODEL 8780190 ncrna LOC102019369 uncharacterized LOC102019369 NW_004955463 5190976 5203856 + 102019369 AGCD01049634;AGCD01049635;AGCD01049636;AGCD01049637;GBDF01125889;XR_263149;XR_263150 MODEL 8720989 pseudo LOC102008445 proteasome assembly chaperone 1-like NW_004955431 13381828 13382937 - 102008445 AGCD01030304 MODEL 8720614 protein-coding Prdm13 PR/SET domain 13 ENCODES a protein that exhibits chromatin binding (ortholog); histone methyltransferase activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN GABAergic neuron differentiation (ortholog); hypothalamus cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH CEREBELLAR DYSFUNCTION, IMPAIRED INTELLECTUAL DEVELOPMENT, AND HYPOGONADOTROPIC HYPOGONADISM (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) NW_004955411 25481601 25489049 + 102020641 AGCD01012160;AGCD01012161;GBDF01198351;XM_005377940 XP_005377997 MODEL 8969088 protein-coding Pih1d2 PIH1 domain containing 2 ENCODES a protein that exhibits small GTPase binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); sarcoma (ortholog); FOUND IN protein folding chaperone complex (ortholog) NW_004955412 13748120 13755498 - 102025891 AGCD01012844;AGCD01012845;GBCE01169691;XM_005378104;XM_013511039 XP_005378161;XP_013366493 MODEL 9054750 protein-coding Slc29a4 solute carrier family 29 member 4 ENCODES a protein that exhibits efflux transmembrane transporter activity (ortholog); monoamine transmembrane transporter activity (ortholog); monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN adenosine transport (ortholog); cellular detoxification (ortholog); dopamine uptake (ortholog); PARTICIPATES IN metformin pharmacokinetics pathway; ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955460 10155916 10181974 + 102029155 AGCD01048573;AGCD01048574;AGCD01048575;GBBH01180329;XM_005397838;XM_005397839;XM_013521136 XP_005397895;XP_005397896;XP_013376590 MODEL 8785871 protein-coding Ppfia1 PPFI scaffold protein A1 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN cortical microtubule organization (ortholog); negative regulation of protein localization to plasma membrane (ortholog); negative regulation of stress fiber assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN axon (ortholog); cell cortex (ortholog); cytosol (ortholog) NW_004955422 15892945 15998786 - 102019607 AGCD01022883;AGCD01022884;AGCD01022885;AGCD01022886;GBDF01043150;GBDJ01234038;XM_013514113 XP_013369567 MODEL 8867857 protein-coding LOC102008067 stereocilin NW_004955409 27019957 27035448 + 102008067 AGCD01010205;GBDF01030323;XM_005376944;XM_005376945 XP_005377001;XP_005377002 MODEL 8727959 protein-coding Rps27 ribosomal protein S27 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Diamond-Blackfan anemia 17 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955545 599762 601399 + 102026801 AGCD01071803;GBBH01002907;XM_005411466 XP_005411523 MODEL 8791297 protein-coding Sdsl serine dehydratase like ENCODES a protein that exhibits glutamate racemase activity (ortholog); identical protein binding (ortholog); L-serine ammonia-lyase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog) NW_004955482 9656563 9670951 + 102018187 AGCD01057578;AGCD01057579;AGCD01057580;AGCD01057581;GBDK01189822;XM_005403227;XM_005403228;XM_013503596 XP_005403284;XP_005403285;XP_013359050 MODEL 730469214 snorna SNORA28 Small nucleolar RNA SNORA28 8912497 ncrna LOC102004725 uncharacterized LOC102004725 NW_004955423 3357252 3371703 + 102004725 AGCD01023511;GBDK01121190;XR_001234108;XR_260946 MODEL 39132994 snrna U1 U1 spliceosomal RNA 9003786 pseudo LOC102006151 cyclin-dependent-like kinase 5 pseudogene NW_004955503 2378754 2379747 - 102006151 AGCD01064606 MODEL 8856428 protein-coding Rbm23 RNA binding motif protein 23 INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955409 37384872 37392896 + 102021104 AGCD01010511;GBDF01306118;XM_013510245 XP_013365699 MODEL 8922549 protein-coding Tpd52l3 TPD52 like 3 NW_004955434 10291418 10293330 + 102012997 AGCD01032336;XM_005388749 XP_005388806 MODEL 8852583 protein-coding Btbd17 BTB domain containing 17 ASSOCIATED WITH cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955553 1247702 1271777 - 102008771 AGCD01072873;AGCD01072874;AGCD01072875;AGCD01072876;GBCB01111017;XM_005412235;XM_013508637;XM_013508638 XP_005412292;XP_013364091;XP_013364092 MODEL 8834409 protein-coding Prr34 PRR34 long non-coding RNA ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955413 30237791 30247142 - 102006761 AGCD01014603;GBDI01370966;XM_013511589 XP_013367043 MODEL 39131472 protein-coding TRIML2 tripartite motif family like 2 8937414 pseudo LOC102005429 uncharacterized LOC102005429 NW_004955585 307477 456009 + 102005429 AGCD01075996;AGCD01075997 MODEL 8806919 protein-coding LOC102019743 olfactory receptor 4K13-like NW_004955550 225493 226434 - 102019743 AGCD01072488;XM_005412128 XP_005412185 MODEL 8981616 protein-coding Pgcka1 PDCD10 and GCKIII kinases associated 1 INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH cholestasis (ortholog); FOUND IN cell periphery (ortholog); plasma membrane (ortholog) NW_004955443 9540047 9628483 - 102010528 AGCD01038357;AGCD01038358;GBDI01328203;XM_005392012;XM_005392013 XP_005392069;XP_005392070 MODEL 9009351 protein-coding LOC102002971 butyrophilin subfamily 1 member A1-like NW_004955581 1320018 1344045 + 102002971 AGCD01075730;GBBH01227542;XM_013509756;XM_013509757;XM_013509758;XM_013509759;XM_013509760;XM_013509761;XM_013509762;XR_001232489 XP_013365210;XP_013365211;XP_013365212;XP_013365213;XP_013365214;XP_013365215;XP_013365216 MODEL 8808246 protein-coding Snrpb small nuclear ribonucleoprotein polypeptides B and B1 ENCODES a protein that exhibits histone pre-mRNA DCP binding (ortholog); RNA binding (ortholog); telomerase RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebrocostomandibular syndrome (ortholog); Disease Progression (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955415 13522638 13530725 - 102015006 AGCD01016252;GBDI01021505;XM_005380752;XM_005380753;XM_005380754;XM_005380755 XP_005380809;XP_005380810;XP_005380811;XP_005380812 MODEL 8934344 protein-coding Ptcra pre T cell antigen receptor alpha INVOLVED IN alpha-beta T cell differentiation (ortholog); negative regulation of thymocyte apoptotic process (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Immunodeficiency 126 (ortholog); polycystic ovary syndrome (ortholog); Zellweger syndrome (ortholog); FOUND IN plasma membrane (ortholog) NW_004955437 8920997 8927354 + 102025508 AGCD01034507;GBCQ01091734;XM_005389728;XM_005389729;XM_005389730;XM_005389731;XM_005389732;XM_013516772 XP_005389785;XP_005389786;XP_005389787;XP_005389788;XP_005389789;XP_013372226 MODEL 8782728 protein-coding Plch2 phospholipase C eta 2 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN phosphatidylinositol metabolic process (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955486 8717799 8785144 - 102007236 AGCD01059155;AGCD01059156;GBBH01188538;XM_013504169;XM_013504170;XM_013504172;XM_013504173;XM_013504174 XP_013359623;XP_013359624;XP_013359626;XP_013359627;XP_013359628 MODEL 8926718 pseudo LOC102011145 protein salvador homolog 1 pseudogene NW_004955532 3962130 3963932 - 102011145 AGCD01070305 MODEL 8910084 protein-coding Vwa8 von Willebrand factor A domain containing 8 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) NW_004955518 4351781 4723479 + 102028887 AGCD01067827;AGCD01067828;AGCD01067829;AGCD01067830;AGCD01067831;AGCD01067832;AGCD01067833;AGCD01067834;AGCD01067835;AGCD01067836;GBCB01043083;GBDI01292258;XM_013506956 XP_013362410 MODEL 8818003 pseudo LOC102011989 F-actin-capping protein subunit alpha-1 pseudogene NW_004955481 9008939 9010077 - 102011989 AGCD01057092 MODEL 8807940 protein-coding Thrap3 thyroid hormone receptor associated protein 3 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); phosphoprotein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN circadian rhythm (ortholog); mRNA stabilization (ortholog); nuclear-transcribed mRNA catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN exon-exon junction complex (ortholog); mediator complex (ortholog); nuclear speck (ortholog) NW_004955452 14233155 14282521 + 102003201 AGCD01044459;AGCD01044460;AGCD01044461;AGCD01044462;GBDF01049619;XM_005395182;XM_005395183;XM_005395184 XP_005395239;XP_005395240;XP_005395241 MODEL 8830862 protein-coding Eola1 endothelium and lymphocyte associated ASCH domain 1 INVOLVED IN regulation of gene expression (ortholog); regulation of interleukin-6 production (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955498 1911103 1916645 + 102021893 AGCD01062753;GBDJ01129367;XM_005406399 XP_005406456 MODEL 8870338 pseudo LOC102010777 cyclin-dependent kinase 4 pseudogene NW_004955458 15031076 15032155 + 102010777 AGCD01047860 MODEL 8921439 protein-coding Rnf8 ring finger protein 8 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); identical protein binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair-dependent chromatin remodeling (ortholog); double-strand break repair (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955437 5807592 5832213 - 102018974 AGCD01034402;AGCD01034403;GBCE01188004;XM_005389618;XM_005389619 XP_005389675;XP_005389676 MODEL 10322069 ncrna LOC106147412 uncharacterized LOC106147412 NW_004955555 1293558 1294139 + 106147412 AGCD01073070;GBDK01203640;XR_001232310 MODEL 39133306 snrna U4 U4 spliceosomal RNA 8880742 protein-coding Sertad4 SERTA domain containing 4 ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955489 1947819 1958434 - 102019070 AGCD01059855;AGCD01059856;GBBH01121747;GBDJ01175985;XM_005404520 XP_005404577 MODEL 8920238 ncrna LOC102003985 uncharacterized LOC102003985 NW_004955424 19333276 19352042 + 102003985 AGCD01024815;AGCD01024816;GBDF01262654;XR_261082 MODEL 10315952 ncrna LOC106150311 uncharacterized LOC106150311 NW_004955471 6543221 6555015 - 106150311 AGCD01053127;GBDF01068368;XR_001237045 MODEL 8834817 pseudo LOC102018166 serine-threonine kinase receptor-associated protein-like NW_004955409 35958599 35960059 + 102018166 AGCD01010437 MODEL 8737975 protein-coding LOC102007264 ATP-binding cassette sub-family G member 2-like NW_004955433 399182 486055 - 102007264 AGCD01031317;AGCD01031318;AGCD01031319;AGCD01031320;AGCD01031321;AGCD01031322;AGCD01031323;AGCD01031324;GBDJ01086753;XM_005388159 XP_005388216 MODEL 8773163 protein-coding Rfpl4b ret finger protein like 4B NW_004955526 4242108 4253095 - 102013207 AGCD01069364;XM_013507355 XP_013362809 MODEL 8707916 protein-coding LOC102011579 pancreatic alpha-amylase NW_004955435 7974418 8023066 + 102011579 AGCD01032983;AGCD01032984;AGCD01032985;AGCD01032986;AGCD01032987;AGCD01032988;AGCD01032989;GBDK01013521;XM_005388812;XM_013516505;XM_013516506 XP_005388869;XP_013371959;XP_013371960 MODEL 8810849 protein-coding Rad54l RAD54 like ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); ATP-dependent DNA/DNA annealing activity (ortholog); INVOLVED IN chromosome organization (ortholog); determination of adult lifespan (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); protein-containing complex (ortholog); site of double-strand break (ortholog) NW_004955464 11996512 12033525 - 102020542 AGCD01050170;AGCD01050171;AGCD01050172;AGCD01050173;GBDI01210773;XM_005398677;XM_005398678;XM_005398680 XP_005398734;XP_005398735;XP_005398737 MODEL 8732770 protein-coding Sebox SEBOX homeobox INVOLVED IN embryo development ending in birth or egg hatching (ortholog); oogenesis (ortholog) NW_004955481 4768121 4770611 + 102005377 AGCD01056951;GBDI01104261;XM_005415252 XP_005415309 MODEL 730469378 snorna SNORA28 Small nucleolar RNA SNORA28 39132081 snorna SNORA72 Small nucleolar RNA SNORA72 8912676 protein-coding Spag8 sperm associated antigen 8 INVOLVED IN flagellated sperm motility (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Hereditary Adrenocortical Carcinoma (ortholog); Leber congenital amaurosis (ortholog); melanoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); cilium (ortholog) NW_004955472 503286 506261 + 102006765 AGCD01053339;GBDK01184789;XM_013522937 XP_013378391 MODEL 9008797 pseudo LOC102013170 clusterin-associated protein 1 pseudogene NW_004955477 8594751 8596230 - 102013170 AGCD01055648 MODEL 9021863 protein-coding LOC102005795 fibrous sheath-interacting protein 2-like NW_004955473 4588318 4648716 + 102005795 AGCD01053953;AGCD01053954;GBDF01110725;XM_005401232;XM_013523062;XM_013523063 XP_005401289;XP_013378516;XP_013378517 MODEL 9031409 protein-coding LOC102022275 interleukin-36 beta-like NW_004955470 1241867 1252089 - 102022275 AGCD01052631;GBCC01021600;XM_005400589 XP_005400646 MODEL 9065199 pseudo LOC102019372 trifunctional enzyme subunit alpha, mitochondrial pseudogene NW_004955411 23447126 23462571 - 102019372 AGCD01012108 MODEL 9027735 pseudo LOC102008826 creatine kinase U-type, mitochondrial-like NW_004955409 22945071 22950655 + 102008826 AGCD01010048 MODEL 8925791 protein-coding Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of protein polyubiquitination (ortholog); protein ubiquitination (ortholog); regulation of circadian rhythm (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955508 4539531 4615439 - 102022520 AGCD01065874;AGCD01065875;GBDJ01092850;XM_005407774;XM_005407775 XP_005407831;XP_005407832 MODEL 8820351 ncrna LOC102008451 uncharacterized LOC102008451 NW_004955435 5691131 5736182 + 102008451 AGCD01032894;GBCQ01091899;XR_001234882 MODEL 8780625 protein-coding LOC102005435 beta-defensin 33-like NW_004955403 53686697 53694266 + 102005435 AGCD01003067;AGCD01003068;AGCD01003069;GBDK01170251;XM_005373836 XP_005373893 MODEL 8755516 protein-coding Rlig1 RNA 5'-phosphate and 3'-OH ligase 1 ENCODES a protein that exhibits RNA ligase (ATP) activity (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); response to reactive oxygen species (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955405 25514644 25533520 + 102009679 AGCD01005177;GBDF01081483;XM_005374420 XP_005374477 MODEL 8936815 protein-coding Prdm14 PR/SET domain 14 ENCODES a protein that exhibits chromatin DNA binding (ortholog); histone methyltransferase binding (ortholog); methyltransferase regulator activity (ortholog); INVOLVED IN cell fate specification (ortholog); cell morphogenesis (ortholog); embryo implantation (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); lung cancer (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955444 9606310 9626772 + 102004335 AGCD01038974;AGCD01038975;AGCD01038976;GBDF01277783;XM_005392110 XP_005392167 MODEL 8868600 ncrna LOC102006153 uncharacterized LOC102006153 NW_004955511 3567813 3569808 - 102006153 AGCD01066468;GBDF01146056;XR_264424 MODEL 8860921 protein-coding Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); INVOLVED IN negative regulation of toll-like receptor signaling pathway (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); positive regulation of toll-like receptor signaling pathway (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955507 2805782 2918664 - 102018116 AGCD01065594;AGCD01065595;AGCD01065596;GBBH01001766;XM_005407578;XM_005407579;XM_013506162;XM_013506163;XM_013506164 XP_005407635;XP_005407636;XP_013361616;XP_013361617;XP_013361618 MODEL 39131948 snorna SNORD34 Small nucleolar RNA SNORD34 8868655 ncrna LOC102008072 uncharacterized LOC102008072 NW_004955410 28976836 28996818 + 102008072 AGCD01011267;AGCD01011268;GBDF01307217;XR_259880 MODEL 9008756 ncrna LOC102009976 uncharacterized LOC102009976 NW_004955515 4423696 4427822 - 102009976 AGCD01067320;GBDF01279453;XR_001231800;XR_001231801;XR_001231802;XR_001231803 MODEL 39132999 snrna U1 U1 spliceosomal RNA 9035769 protein-coding Rbm24 RNA binding motif protein 24 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA CDS binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); DNA damage response (ortholog); endocardial cushion development (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); sarcoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955483 8705533 8716772 - 102024340 AGCD01057842;GBDI01258799;XM_005403407;XM_005403408 XP_005403464;XP_005403465 MODEL 9055111 protein-coding LOC102016228 unconventional myosin-XVI NW_004955404 2942714 3296639 - 102016228 AGCD01003266;AGCD01003267;AGCD01003268;AGCD01003269;GBCE01150866;GBDF01187230;XM_013515827 XP_013371281 MODEL 9041775 protein-coding Thrb thyroid hormone receptor beta ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); apoptotic process (ortholog); cellular response to thyroid hormone stimulus (ortholog); ASSOCIATED WITH Arachnodactyly (ortholog); Arnold-Chiari Malformation (ortholog); atrial fibrillation (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955430 15992146 16322696 - 102011571 AGCD01029630;AGCD01029631;AGCD01029632;AGCD01029633;AGCD01029634;GBDI01296864;XM_005387482;XM_013515651 XP_005387539;XP_013371105 MODEL 8982430 protein-coding Rnft1 ring finger protein, transmembrane 1 ENCODES a protein that exhibits ubiquitin binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of ERAD pathway (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955451 3165316 3178991 + 102011166 AGCD01043044;AGCD01043045;GBDI01295285;XM_005393973;XM_013519162 XP_005394030;XP_013374616 MODEL 8873585 protein-coding Triml2 tripartite motif family like 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN response to retinoic acid (ortholog) NW_004955403 21089194 21104840 + 102006531 AGCD01002180;GBDF01242145;XM_013514804 XP_013370258 MODEL 8719421 protein-coding Slc2a1 solute carrier family 2 member 1 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); dehydroascorbic acid transmembrane transporter activity (ortholog); fucose transmembrane transporter activity (ortholog); INVOLVED IN cellular hyperosmotic response (ortholog); cellular response to glucose starvation (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN facilitative sugar transporter mediated glucose transport pathway; Glut1 deficiency syndrome pathway; hypoxia inducible factor pathway; ASSOCIATED WITH absence epilepsy (ortholog); alcohol dependence (ortholog); Alcohol-Related Disorders (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) NW_004955537 2408042 2438788 - 102017914 AGCD01070929;AGCD01070930;GBCQ01066583;XM_005410625 XP_005410682 MODEL 8910566 protein-coding Pgd phosphogluconate dehydrogenase ENCODES a protein that exhibits carbohydrate binding (ortholog); carboxylic acid binding (ortholog); NADP binding (ortholog); INVOLVED IN D-gluconate metabolic process (ortholog); NADP+ metabolic process (ortholog); NADPH regeneration (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH asthma (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN cytosol (ortholog) NW_004955486 3344705 3356906 - 102017025 AGCD01059023;AGCD01059024;GBDF01003677;XM_005404019 XP_005404076 MODEL 8802499 protein-coding Prr35 proline rich 35 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog) NW_004955442 16639379 16644669 - 102025948 AGCD01037905;GBCQ01101664;XM_005391639;XM_005391640 XP_005391696;XP_005391697 MODEL 8765418 pseudo LOC102002972 uncharacterized LOC102002972 NW_004955449 17868296 17939598 - 102002972 AGCD01042269;AGCD01042270;AGCD01042271;AGCD01042272;AGCD01042273;AGCD01042274;AGCD01042275 MODEL 8752654 protein-coding Tpgs1 tubulin polyglutamylase complex subunit 1 ENCODES a protein that exhibits microtubule binding (ortholog); protein-macromolecule adaptor activity (ortholog); tubulin binding (ortholog); INVOLVED IN adult behavior (ortholog); chemical synaptic transmission (ortholog); microtubule cytoskeleton organization (ortholog); FOUND IN centrosome (ortholog); microtubule (ortholog) NW_004955495 7181907 7189726 - 102024585 AGCD01062124;GBDF01187983;XM_005406039 XP_005406096 MODEL 8943241 protein-coding LOC102011150 uncharacterized LOC102011150 NW_004955440 3381418 3382941 - 102011150 AGCD01036241;GBDF01052510;XM_005390767;XM_013517492 XP_005390824;XP_013372946 MODEL 8902761 protein-coding Ptdss1 phosphatidylserine synthase 1 ENCODES a protein that exhibits L-serine-phosphatidylcholine phosphatidyltransferase activity (ortholog); L-serine-phosphatidylethanolamine phosphatidyltransferase activity (ortholog); INVOLVED IN phosphatidylserine biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955417 12268908 12327127 + 102005804 AGCD01018160;AGCD01018161;AGCD01018162;GBDF01049061;XM_005381833 XP_005381890 MODEL 8888737 protein-coding Snrpb2 small nuclear ribonucleoprotein polypeptide B2 ENCODES a protein that exhibits snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); connective tissue disease (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955415 25880013 25889295 + 102007758 AGCD01016587;GBDF01052661;XM_005380902 XP_005380959 MODEL 8923401 protein-coding Rps27a ribosomal protein S27a ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955424 27823575 27825489 - 102011335 AGCD01025131;GBCQ01012188;XM_005385788 XP_005385845 MODEL 9043657 protein-coding LOC102004729 histone-lysine N-methyltransferase PRDM9 NW_004955499 553632 566756 + 102004729 AGCD01063239;AGCD01063240;GBCQ01046889;GBDF01224963;XM_013505574 XP_013361028 MODEL 8844354 protein-coding Ppfia2 PPFI scaffold protein A2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); structural constituent of postsynaptic density (ortholog); structural constituent of presynapse (ortholog); INVOLVED IN dense core granule cytoskeletal transport (ortholog); regulation of dendritic spine development (ortholog); regulation of dendritic spine morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955405 19837749 20291666 - 102024420 AGCD01005047;AGCD01005048;AGCD01005049;AGCD01005050;AGCD01005051;AGCD01005052;AGCD01005053;AGCD01005054;GBCE01046938;XM_005374377;XM_005374388;XM_013517986;XM_013517988;XM_013517990;XM_013517995;XM_013518004;XM_013518006;XM_013518011;XM_013518014;XM_013518017;XM_013518024;XM_013518025 XP_005374434;XP_005374445;XP_013373440;XP_013373442;XP_013373444;XP_013373449;XP_013373458;XP_013373460;XP_013373465;XP_013373468;XP_013373471;XP_013373478;XP_013373479 MODEL 9026813 protein-coding Vwc2 von Willebrand factor C domain containing 2 INVOLVED IN negative regulation of BMP signaling pathway (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); basement membrane (ortholog); extracellular matrix (ortholog) NW_004955456 3949885 4075622 - 102006099 AGCD01046288;GBDI01379282;XM_013520509 XP_013375963 MODEL 9044868 protein-coding Pnpla6 patatin like domain 6, lysophospholipase ENCODES a protein that exhibits B-type glycerophospholipase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Ataxia (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955563 1681112 1703287 - 102030676 AGCD01074156;AGCD01074157;GBDJ01081263;XM_005413181;XM_005413182;XM_005413184;XM_005413185 XP_005413238;XP_005413239;XP_005413241;XP_005413242 MODEL 9013478 protein-coding Eomes eomesodermin ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN astrocyte differentiation (ortholog); blastocyst development (ortholog); brain development (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autoimmune disease of the nervous system (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955430 19280460 19287060 - 102018517 AGCD01029712;GBDJ01152655;XM_005387507 XP_005387564 MODEL 8795535 pseudo LOC102010778 60S ribosomal protein L12-like NW_004955459 3652052 3652565 + 102010778 AGCD01048015 MODEL 8724114 protein-coding LOC102019745 beta-crystallin B2 NW_004955442 19887415 19891508 - 102019745 AGCD01038080;GBDK01038850;XM_013517684 XP_013373138 MODEL 10359836 protein-coding Btbd18 BTB domain containing 18 INVOLVED IN male meiosis I (ortholog); piRNA transcription (ortholog); spermatogenesis (ortholog); FOUND IN nucleus (ortholog) NW_004955511 2641848 2647679 - 106146243 AGCD01066422;XM_013506440 XP_013361894 MODEL 626189210 snorna SNORA44 Small nucleolar RNA SNORA44 10147444 ncrna LOC106147413 uncharacterized LOC106147413 NW_004955555 340650 344365 - 106147413 AGCD01073024;GBBH01066023;XR_001232311 MODEL 8726572 pseudo LOC102003988 PEST proteolytic signal-containing nuclear protein pseudogene NW_004955505 1483191 1484367 + 102003988 AGCD01064974;XM_005407108 MODEL 616940616 snorna SNORA12 Small nucleolar RNA SNORA12 8792541 protein-coding Prdm15 PR/SET domain 15 ENCODES a protein that exhibits promoter-specific chromatin binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of MAPK cascade (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 39680757 39714917 + 102019668 AGCD01007834;GBDI01208301;XM_005375846;XM_013505249 XP_005375903;XP_013360703 MODEL 8810062 ncrna LOC102018169 uncharacterized LOC102018169 NW_004955411 3795767 3797434 - 102018169 AGCD01011556;XR_259914 MODEL 8750983 pseudo LOC102007272 non-histone chromosomal protein HMG-17 pseudogene NW_004955528 2647383 2647654 - 102007272 AGCD01069588 MODEL 10199379 ncrna LOC106150312 uncharacterized LOC106150312 NW_004955471 6810142 6811282 - 106150312 AGCD01053130;XR_001237046 MODEL 730469330 snorna SNORA28 Small nucleolar RNA SNORA28 39132845 snorna SNORA73 Small nucleolar RNA SNORA73 family 39133311 snrna U4 U4 spliceosomal RNA 9042815 protein-coding Spag9 sperm associated antigen 9 ENCODES a protein that exhibits identical protein binding (ortholog); JUN kinase binding (ortholog); kinesin binding (ortholog); INVOLVED IN JNK cascade (ortholog); lysosome localization (ortholog); negative regulation of dendrite extension (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955451 10800251 10895400 + 102027370 AGCD01043333;AGCD01043334;GBCB01024996;XM_005394115;XM_005394116;XM_005394118;XM_005394119;XM_013519279;XM_013519280;XM_013519281;XM_013519283 XP_005394172;XP_005394173;XP_005394175;XP_005394176;XP_013374733;XP_013374734;XP_013374735;XP_013374737 MODEL 8733739 ncrna LOC102013171 uncharacterized LOC102013171 NW_004955481 5717841 5719119 - 102013171 AGCD01057001;XR_263783 MODEL 8989929 ncrna LOC102008827 uncharacterized LOC102008827 NW_004955410 29223762 29228888 - 102008827 AGCD01011276;GBDK01225118;XR_259882 MODEL 8843012 ncrna LOC102008453 uncharacterized LOC102008453 NW_004955436 8430136 8452234 + 102008453 AGCD01033741;AGCD01033742;GBDJ01154251;XR_261770 MODEL 8966427 ncrna LOC102005799 uncharacterized LOC102005799 NW_004955476 1188807 1194269 + 102005799 AGCD01055201;GBDK01109467;XR_263617 MODEL 8988150 ncrna LOC102005440 uncharacterized LOC102005440 NW_004955405 37765968 37767069 + 102005440 AGCD01005459;GBDF01250670;XR_001236121 MODEL 8730818 protein-coding LOC102011991 olfactory receptor 5V1-like NW_004955418 30227847 30228797 + 102011991 AGCD01019507;XM_005382370 XP_005382427 MODEL 8849398 protein-coding Rlim ring finger protein, LIM domain interacting ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); protein ubiquitination (ortholog); random inactivation of X chromosome (ortholog); ASSOCIATED WITH abducens nerve palsy (ortholog); acute myeloid leukemia (ortholog); asthma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955562 508723 531699 - 102024290 AGCD01073927;GBCQ01128280;XM_005413083;XM_005413084;XM_013509117;XM_013509118;XM_013509119 XP_005413140;XP_005413141;XP_013364571;XP_013364572;XP_013364573 MODEL 39132937 snorna SNORD35 Small nucleolar RNA SNORD35 8866243 pseudo LOC102006157 spermatogenesis-associated protein 2 pseudogene NW_004955433 1909956 1910500 - 102006157 AGCD01031373 MODEL 8939476 protein-coding Plcl1 phospholipase C like 1 (inactive) ENCODES a protein that exhibits GABA receptor binding (ortholog); INVOLVED IN gamma-aminobutyric acid signaling pathway (ortholog); negative regulation of cold-induced thermogenesis (ortholog); regulation of synaptic transmission, GABAergic (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955403 2643092 2904651 - 102011717 AGCD01001738;AGCD01001739;AGCD01001740;GBDI01356679;XM_005373259;XM_013511993;XM_013511996;XM_013512003;XM_013512012;XM_013512015;XM_013512018;XM_013512022 XP_005373316;XP_013367447;XP_013367450;XP_013367457;XP_013367466;XP_013367469;XP_013367472;XP_013367476 MODEL 9009914 protein-coding Prr36 proline rich 36 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955563 1377887 1383597 + 102020851 AGCD01074144;AGCD01074145;GBBH01205771;XM_005413148 XP_005413205 MODEL 730469461 snorna SNORA13 Small nucleolar RNA SNORA13 8786262 protein-coding LOC102011152 serine protease 29-like NW_004955442 15971410 15973505 + 102011152 AGCD01037889;XM_005391589 XP_005391646 MODEL 39133002 snrna U1 U1 spliceosomal RNA 8882978 protein-coding Sec11a SEC11 homolog A, signal peptidase complex subunit ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); signal peptidase activity (ortholog); INVOLVED IN protein maturation (ortholog); protein processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); signal peptidase complex (ortholog) NW_004955416 14421985 14459233 + 102011310 AGCD01017264;AGCD01017265;AGCD01017266;AGCD01017267;AGCD01017268;AGCD01017269;AGCD01017270;GBDI01081430;XM_005381493;XM_013512510;XM_013512511 XP_005381550;XP_013367964;XP_013367965 MODEL 8877138 pseudo LOC102009977 inosine-5'-monophosphate dehydrogenase 2 pseudogene NW_004955516 3145206 3147423 - 102009977 AGCD01067484 MODEL 8953204 protein-coding Spta1 spectrin alpha, erythrocytic 1 INVOLVED IN actin cytoskeleton organization (ortholog); hemopoiesis (ortholog); lymphocyte homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); Elliptocytosis 2 (ortholog); FOUND IN axon (ortholog); cortical cytoskeleton (ortholog); cuticular plate (ortholog) NW_004955468 10472601 10545402 - 102027631 AGCD01052084;AGCD01052085;AGCD01052086;GBBH01036924;XM_013522277 XP_013377731 MODEL 8705883 ncrna LOC102011583 uncharacterized LOC102011583 NW_004955436 8909255 8926076 + 102011583 AGCD01033752;AGCD01033753;AGCD01033754;GBDI01265317;XR_001234994;XR_261775;XR_261776 MODEL 8705786 pseudo LOC102008073 39S ribosomal protein L47, mitochondrial pseudogene NW_004955411 8554284 8555056 + 102008073 AGCD01011730 MODEL 9027483 protein-coding LOC102019383 olfactory receptor 51S1 NW_004955414 20464355 20465326 - 102019383 AGCD01015375;XM_005380058 XP_005380115 MODEL 8890713 ncrna LOC102016234 uncharacterized LOC102016234 NW_004955407 25388769 25391467 - 102016234 AGCD01007502;XR_259580 MODEL 8879933 protein-coding LOC102022276 olfactory receptor 51L1-like NW_004955414 20630719 20632805 + 102022276 AGCD01015384;AGCD01015385;XM_013511722 XP_013367176 MODEL 8963672 protein-coding Rnft2 ring finger protein, transmembrane 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955455 14257044 14331296 - 102021096 AGCD01046087;AGCD01046088;AGCD01046089;GBDF01193909;GBDJ01410841;XM_013520450 XP_013375904 MODEL 9063518 protein-coding Rft1 RFT1 glycolipid translocator homolog ENCODES a protein that exhibits glycolipid floppase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); glycolipid translocation (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); bruxism (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955430 3055766 3096501 - 102029213 AGCD01029191;GBDI01215765;XM_005387364 XP_005387421 MODEL 8827968 protein-coding Trio trio Rho guanine nucleotide exchange factor ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); negative regulation of fat cell differentiation (ortholog); neuron projection morphogenesis (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955426 3647273 3846916 + 102008555 AGCD01026083;AGCD01026084;GBCQ01175997;XM_005386123;XM_013514974 XP_005386180;XP_013370428 MODEL 8925343 ncrna LOC102003990 uncharacterized LOC102003990 NW_004955428 13288412 13293352 + 102003990 AGCD01027947;GBDF01181697;XR_001234443;XR_261302 MODEL 9043035 protein-coding Pik3c2a phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (ortholog); 1-phosphatidylinositol-4-phosphate 3-kinase activity (ortholog); INVOLVED IN autophagosome organization (ortholog); cellular response to starvation (ortholog); endocytosis (ortholog); PARTICIPATES IN phosphoinositide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955414 31896161 31999730 - 102007989 AGCD01015764;AGCD01015765;AGCD01015766;AGCD01015767;GBDJ01180231;XM_005380376;XM_013512017 XP_005380433;XP_013367471 MODEL 9052458 ncrna LOC102002973 uncharacterized LOC102002973 NW_004955402 40884991 40894999 + 102002973 AGCD01001005;XR_259081 MODEL 8824245 protein-coding Slc2a10 solute carrier family 2 member 10 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); dehydroascorbic acid transmembrane transporter activity (ortholog); INVOLVED IN artery development (ortholog); cell redox homeostasis (ortholog); D-glucose import across plasma membrane (ortholog); ASSOCIATED WITH Aneurysm (ortholog); anxiety disorder (ortholog); aortic aneurysm (ortholog); FOUND IN cytosol (ortholog); endomembrane system (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955445 10708147 10722109 - 102016323 AGCD01039677;AGCD01039678;GBDF01078357;XM_005392370 XP_005392427 MODEL 9064744 protein-coding Rad54l2 RAD54 like 2 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); DNA/RNA helicase activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); R-loop processing (ortholog); transcription elongation by RNA polymerase II (ortholog); ASSOCIATED WITH Apnea (ortholog); brain disease (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nuclear speck (ortholog) NW_004955532 3177655 3271683 + 102017811 AGCD01070270;AGCD01070271;AGCD01070272;AGCD01070273;AGCD01070274;AGCD01070275;GBDF01252419;XM_005410317;XM_005410318 XP_005410374;XP_005410375 MODEL 8707995 protein-coding LOC102018173 protein SPT2 homolog NW_004955412 18553976 18555107 + 102018173 AGCD01012944;AGCD01012945;GBDF01021744;XM_013510975 XP_013366429 MODEL 8900505 protein-coding Sertm1 serine rich and transmembrane domain containing 1 ASSOCIATED WITH sarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955431 9363917 9384620 - 102027666 AGCD01030177;GBBH01024568;XM_005387677;XM_005387678;XM_005387679 XP_005387734;XP_005387735;XP_005387736 MODEL 8839648 protein-coding Thrsp thyroid hormone responsive ENCODES a protein that exhibits identical protein binding (ortholog); molecular function inhibitor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN regulation of lipid biosynthetic process (ortholog); regulation of triglyceride biosynthetic process (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); attention deficit hyperactivity disorder (ortholog); carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955414 13879095 13883378 - 102006448 AGCD01015123;GBDI01010753;XM_005379823 XP_005379880 MODEL 9012039 protein-coding Vwc2l von Willebrand factor C domain containing 2 like INVOLVED IN negative regulation of BMP signaling pathway (ortholog); positive regulation of neuron differentiation (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); extracellular region (ortholog) NW_004955457 1392622 1540314 - 102021522 AGCD01046723;AGCD01046724;AGCD01046725;AGCD01046726;AGCD01046727;GBDF01130103;XM_013520670;XM_013520671 XP_013376124;XP_013376125 MODEL 8865432 protein-coding Rbm25 RNA binding motif protein 25 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear speck (ortholog) NW_004955523 2213766 2270417 - 102029658 AGCD01068560;AGCD01068561;GBDJ01126912;XM_005409430;XM_013507153 XP_005409487;XP_013362607 MODEL 8901511 protein-coding Pnpla7 patatin like domain 7, lysophospholipase ENCODES a protein that exhibits phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN phosphatidylcholine catabolic process (ortholog); ASSOCIATED WITH Autosomal Recessive Peripheral Neuropathy with or without Impaired Intellectual Development (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955513 5376690 5436095 - 102016084 AGCD01066969;GBDF01043420;XM_005408619;XM_005408620;XM_005408621;XM_013506659;XM_013506660 XP_005408676;XP_005408677;XP_005408678;XP_013362113;XP_013362114 MODEL 8999491 protein-coding LOC102010781 proline-rich proteoglycan 2-like NW_004955463 13403383 13407571 + 102010781 AGCD01049866;GBDI01274687;XM_005398474 XP_005398531 MODEL 8846359 protein-coding LOC102008077 olfactory receptor 8B3 NW_004955412 25357388 25358344 - 102008077 AGCD01013151;XM_005378420 XP_005378477 MODEL 8906559 protein-coding LOC102019754 disintegrin and metalloproteinase domain-containing protein 21-like NW_004955402 1994589 1997255 - 102019754 AGCD01000065;GBDF01010897;XM_005372587 XP_005372644 MODEL 8780271 protein-coding Sparc secreted protein acidic and cysteine rich ENCODES a protein that exhibits calcium ion binding (ortholog); collagen binding (ortholog); extracellular matrix binding (ortholog); INVOLVED IN bone development (ortholog); cellular response to growth factor stimulus (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); Brain Injuries (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular matrix (ortholog) NW_004955408 6100123 6122460 - 102021944 AGCD01008164;GBDF01263214;XM_005376165;XM_005376166;XM_005376167 XP_005376222;XP_005376223;XP_005376224 MODEL 730469168 snorna SNORA44 Small nucleolar RNA SNORA44 8735131 protein-coding Pgf placental growth factor ENCODES a protein that exhibits growth factor activity (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); branching involved in ureteric bud morphogenesis (ortholog); cellular response to hormone stimulus (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); amyotrophic lateral sclerosis (ortholog); ankylosing spondylitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955523 616196 627055 + 102015139 AGCD01068471;AGCD01068472;GBBH01120043;GBDI01060117;XM_005409381 XP_005409438 MODEL 8801495 protein-coding Ppfia3 PPFI scaffold protein A3 INVOLVED IN neurotransmitter secretion (ortholog); regulation of short-term neuronal synaptic plasticity (ortholog); synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); epididymosome (ortholog) NW_004955559 1587633 1610065 - 102022974 AGCD01073652;AGCD01073653;GBCQ01152568;XM_005412904;XM_013508999;XM_013509000;XM_013509001 XP_005412961;XP_013364453;XP_013364454;XP_013364455 MODEL 9054996 protein-coding Rln3 relaxin 3 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); INVOLVED IN positive regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Hyperplasia (ortholog); Myocardial Ischemia (ortholog) NW_004955415 32747362 32749338 + 102010155 AGCD01016732;GBBH01048357;XM_005381083 XP_005381140 MODEL 8867853 pseudo LOC102006158 nucleobindin-2 pseudogene NW_004955434 753047 754103 - 102006158 AGCD01032038 MODEL 9052216 protein-coding Snrpc small nuclear ribonucleoprotein polypeptide C ENCODES a protein that exhibits protein homodimerization activity (ortholog); single-stranded RNA binding (ortholog); U1 snRNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cajal body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 2770251 2830871 + 102019321 AGCD01034286;AGCD01034287;AGCD01034288;GBDF01144864;XM_013516970;XM_013516971 XP_013372424;XP_013372425 MODEL 9022593 protein-coding Plcl2 phospholipase C like 2 ENCODES a protein that exhibits GABA receptor binding (ortholog); INVOLVED IN B cell proliferation involved in immune response (ortholog); B-1a B cell differentiation (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955430 9157074 9347366 + 102028997 AGCD01029407;AGCD01029408;AGCD01029409;GBCE01152675;GBDJ01186898;XM_005387455 XP_005387512 MODEL 8994865 protein-coding LOC102007274 FMR1 neighbor-like NW_004955532 1194463 1194945 + 102007274 AGCD01070170;XM_013507573 XP_013363027 MODEL 8709800 pseudo LOC102008454 uncharacterized LOC102008454 NW_004955436 22240028 22281455 + 102008454 AGCD01034088;AGCD01034089 MODEL 39132850 snorna SNORA73 Small nucleolar RNA SNORA73 family 8705962 protein-coding Sec11c SEC11 homolog C, signal peptidase complex subunit ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); signal peptidase activity (ortholog); INVOLVED IN protein maturation (ortholog); protein processing (ortholog); ASSOCIATED WITH lung cancer (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); signal peptidase complex (ortholog) NW_004955402 43317038 43333816 + 102013128 AGCD01001070;GBDI01007992;XM_005372997 XP_005373054 MODEL 39132938 snorna SNORD35 Small nucleolar RNA SNORD35 9046093 protein-coding Ep300 EP300 lysine acetyltransferase ENCODES a protein that exhibits acetylation-dependent protein binding (ortholog); acetyltransferase activity (ortholog); acyltransferase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); apoptotic process (ortholog); B cell differentiation (ortholog); PARTICIPATES IN androgen signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); adrenocorticotropic hormone deficiency (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955413 26647553 26727875 + 102015395 AGCD01014465;AGCD01014466;AGCD01014467;GBBH01093312;GBDF01017704;XM_005379339 XP_005379396 MODEL 39133312 snrna U4 U4 spliceosomal RNA 8868661 protein-coding Btbd19 BTB domain containing 19 ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955464 13401388 13416924 - 102008074 AGCD01050274;AGCD01050275;GBDJ01381390;XM_005398728;XM_005398729;XM_005398730;XM_013521629 XP_005398785;XP_005398786;XP_005398787;XP_013377083 MODEL 8813586 protein-coding LOC102013178 olfactory receptor 4C46-like NW_004955422 151671 152600 + 102013178 AGCD01022395;XM_005383938 XP_005383995 MODEL 8862071 pseudo LOC102005801 ewing's tumor-associated antigen 1 pseudogene NW_004955476 28845 38954 + 102005801 AGCD01055190 MODEL 10245666 ncrna LOC106147414 uncharacterized LOC106147414 NW_004955555 2274477 2278858 + 106147414 AGCD01073143;GBDI01199241;XR_001232314 MODEL 8864885 ncrna LOC102011996 uncharacterized LOC102011996 NW_004955421 24720574 24725193 + 102011996 AGCD01022221;GBDI01347519;XR_260825 MODEL 8974109 protein-coding Tpgs2 tubulin polyglutamylase complex subunit 2 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN microtubule (ortholog) NW_004955402 23286950 23319207 - 102015678 AGCD01000621;GBDJ01041805;XM_005372833;XM_005372835;XM_005372836;XM_005372837;XM_005372838 XP_005372890;XP_005372892;XP_005372893;XP_005372894;XP_005372895 MODEL 8733286 protein-coding Prdm16 PR/SET domain 16 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN beige fat cell differentiation (ortholog); brown fat cell differentiation (ortholog); heterochromatin organization (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH anxiety disorder (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); asthma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955486 8139848 8327788 - 102028759 AGCD01059147;GBCQ01101271;GBDI01386309;XM_013504223 XP_013359677 MODEL 39133005 snrna U1 U1 spliceosomal RNA 8728731 pseudo LOC102004739 olfactory receptor 8J1-like NW_004955511 1437243 1438189 + 102004739 AGCD01066367 MODEL 730469571 snorna SNORA28 Small nucleolar RNA SNORA28 9063415 protein-coding Prr5 proline rich 5 INVOLVED IN positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN TORC2 complex (ortholog) NW_004955413 29360125 29379196 + 102024888 AGCD01014583;GBCQ01003901;GBCQ01003904;XM_013511543 XP_013366997 MODEL 9007012 pseudo LOC102009982 ADP-ribosylation factor-like protein 5A NW_004955435 20926678 20927274 - 102009982 AGCD01033467 MODEL 8769669 ncrna LOC102011584 uncharacterized LOC102011584 NW_004955436 18651414 18692957 + 102011584 AGCD01033976;AGCD01033977;AGCD01033978;GBDF01154303;XR_001234938;XR_001234939 MODEL 8942369 protein-coding LOC102019384 uncharacterized LOC102019384 NW_004955470 548231 553573 - 102019384 AGCD01052614;XM_013522687 XP_013378141 MODEL 8726512 protein-coding Rps27l ribosomal protein S27 like ENCODES a protein that exhibits translation activator activity (ortholog); INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); nucleolus (ortholog) NW_004955450 12122948 12126167 + 102028485 AGCD01042688;AGCD01042689;GBDI01001525;GBDK01022916;XM_005393794 XP_005393851 MODEL 8838137 ncrna LOC102011155 uncharacterized LOC102011155 NW_004955446 10576607 10593188 + 102011155 AGCD01040183;GBDF01235922;XR_262391 MODEL 8939330 protein-coding Rngtt RNA guanylyltransferase and 5'-phosphatase ENCODES a protein that exhibits inorganic triphosphate phosphatase activity (ortholog); mRNA 5'-UTR binding (ortholog); mRNA guanylyltransferase activity (ortholog); INVOLVED IN 7-methylguanosine mRNA capping (ortholog); RNA processing (ortholog); PARTICIPATES IN 5'-end pre-mRNA capping pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955411 15486532 15766880 - 102003526 AGCD01011936;AGCD01011937;AGCD01011938;AGCD01011939;AGCD01011940;AGCD01011941;AGCD01011942;AGCD01011943;AGCD01011944;AGCD01011945;AGCD01011946;AGCD01011947;AGCD01011948;AGCD01011949;GBDF01195779;XM_005377740;XM_005377741 XP_005377797;XP_005377798 MODEL 10279207 protein-coding LOC106150314 translation initiation factor IF-2-like NW_004955471 5044368 5044788 - 106150314 AGCD01053094;GBBH01058056;GBCE01106806;XM_013522881 XP_013378335 MODEL 8954256 protein-coding LOC102005442 endothelin-converting enzyme-like 1 NW_004955453 3475528 3480680 + 102005442 AGCD01044660;GBDJ01085718;GBDK01397222;XM_013520001 XP_013375455 MODEL 8725117 protein-coding Rftn1 raftlin, lipid raft linker 1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); dsRNA transport (ortholog); membrane raft assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); glaucoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); membrane raft (ortholog) NW_004955430 8605057 8801187 - 102028668 AGCD01029390;AGCD01029391;AGCD01029392;AGCD01029393;GBDF01187691;GBDJ01316097;XM_013515694 XP_013371148 MODEL 8960217 protein-coding Ptdss2 phosphatidylserine synthase 2 ENCODES a protein that exhibits CDP-diacylglycerol-serine O-phosphatidyltransferase activity (ortholog); L-serine-phosphatidylethanolamine phosphatidyltransferase activity (ortholog); INVOLVED IN phosphatidylserine biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955476 11554962 11585574 - 102022914 AGCD01055466;GBDJ01080587;XM_005401863;XM_013502927;XM_013502928;XM_013502929;XM_013502930;XM_013502931;XM_013502932 XP_005401920;XP_013358381;XP_013358382;XP_013358383;XP_013358384;XP_013358385;XP_013358386 MODEL 8756139 ncrna LOC102008079 uncharacterized LOC102008079 NW_004955413 2802254 2809284 + 102008079 AGCD01013559;GBCB01093657;XR_001233052;XR_260052 MODEL 8898480 ncrna LOC102022278 uncharacterized LOC102022278 NW_004955414 29010951 29081914 + 102022278 AGCD01015698;AGCD01015699;XR_260210 MODEL 8727623 protein-coding LOC102016240 olfactory receptor 6C4-like NW_004955458 2914387 2916726 - 102016240 AGCD01047255;XM_005397247;XM_013520813 XP_005397304;XP_013376267 MODEL 9006941 protein-coding Trip10 thyroid hormone receptor interactor 10 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); negative regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955495 2770449 2780650 - 102005157 AGCD01061799;GBCE01028494;XM_005405695;XM_005405697 XP_005405752;XP_005405754 MODEL 8964917 pseudo LOC102011998 derlin-1 pseudogene NW_004955422 13345152 13349677 + 102011998 AGCD01022821 MODEL 8868138 protein-coding Rad9a RAD9 checkpoint clamp component A ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); double-stranded DNA 3'-5' DNA exonuclease activity (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN checkpoint clamp complex (ortholog); cytoplasm (ortholog); nuclear body (ortholog) NW_004955422 18079634 18146122 - 102021357 AGCD01022936;AGCD01022937;GBBH01142846;XM_005384341;XM_005384342;XM_005384343;XM_013513939;XM_013513940;XM_013513941;XM_013513942;XM_013513943 XP_005384398;XP_005384399;XP_005384400;XP_013369393;XP_013369394;XP_013369395;XP_013369396;XP_013369397 MODEL 8884599 protein-coding LOC102004740 glycine N-acyltransferase-like protein Keg1 NW_004955511 3618873 3627363 - 102004740 AGCD01066468;GBCQ01042492;XM_005408043 XP_005408100 MODEL 8820373 protein-coding Thsd1 thrombospondin type 1 domain containing 1 ENCODES a protein that exhibits extracellular matrix binding (ortholog); INVOLVED IN focal adhesion assembly (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aortic aneurysm (ortholog); cervical cancer (ortholog); FOUND IN cell periphery (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955431 5472209 5495937 + 102010933 AGCD01030033;GBCE01160079;GBDK01230446;XM_005387630 XP_005387687 MODEL 9036605 protein-coding Sptan1 spectrin alpha, non-erythrocytic 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); spectrin binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN cortical cytoskeleton (ortholog); cuticular plate (ortholog); fascia adherens (ortholog) NW_004955570 1016510 1076499 + 102003498 AGCD01074782;AGCD01074783;AGCD01074784;AGCD01074785;GBCB01041320;GBCQ01011066;XM_005413564;XM_005413568;XM_005413569;XM_005413572;XM_005413573;XM_013509402;XM_013509403;XM_013509404 XP_005413621;XP_005413625;XP_005413626;XP_005413629;XP_005413630;XP_013364856;XP_013364857;XP_013364858 MODEL 9042431 protein-coding LOC102010782 cytochrome P450 4A6-like NW_004955464 11443634 11459566 + 102010782 AGCD01050154;GBCQ01010107;XM_005398643 XP_005398700 MODEL 8893022 protein-coding Pnpla8 patatin like domain 8, phospholipase A2 ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); arachidonate secretion (ortholog); cardiolipin metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955410 12715072 12753433 - 102011514 AGCD01010864;GBDK01277528;XM_005377305;XM_005377306 XP_005377362;XP_005377363 MODEL 39131567 protein-coding SERTM2 serine rich and transmembrane domain containing 2 9026388 protein-coding Rmc1 regulator of MON1-CCZ1 INVOLVED IN regulation of autophagy (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); FOUND IN late endosome (ortholog); late endosome membrane (ortholog); Mon1-Ccz1 complex (ortholog) NW_004955402 11676883 11699715 + 102006514 AGCD01000305;GBDF01051835;XM_005372708 XP_005372765 MODEL 8927881 protein-coding LOC102003991 olfactory receptor 10W1-like NW_004955511 3029816 3030835 + 102003991 AGCD01066439;GBDF01060938;XM_005408259 XP_005408316 MODEL 8702457 protein-coding Sparcl1 SPARC like 1 INVOLVED IN regulation of synapse organization (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); corneal dystrophy (ortholog); FOUND IN extracellular matrix of synaptic cleft (ortholog); glutamatergic synapse (ortholog) NW_004955474 2352662 2387237 + 102015104 AGCD01054289;AGCD01054290;AGCD01054291;GBDJ01018536;XM_005401335;XM_013502717 XP_005401392;XP_013358171 MODEL 8766547 protein-coding Sec13 SEC13 homolog, nuclear pore and COPII component ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); COPII-coated vesicle cargo loading (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN COPII vesicle coat (ortholog); endoplasmic reticulum membrane (ortholog); GATOR2 complex (ortholog) NW_004955561 1707053 1723715 - 102021488 AGCD01073864;GBBH01001853;XM_005413078;XM_013509095;XM_013509096 XP_005413135;XP_013364549;XP_013364550 MODEL 730469088 snorna SNORA44 Small nucleolar RNA SNORA44 8731632 protein-coding LOC102018178 olfactory receptor 10T2-like NW_004955414 23717094 23718032 + 102018178 AGCD01015518;XM_005380522 XP_005380579 MODEL 8941135 protein-coding Pik3c2b phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-4-phosphate 3-kinase activity (ortholog); lipid kinase activity (ortholog); INVOLVED IN autophagosome organization (ortholog); cellular response to starvation (ortholog); macroautophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); endocytic vesicle (ortholog); plasma membrane (ortholog) NW_004955406 40247690 40317556 - 102025206 AGCD01006659;GBDI01227056;XM_005375313 XP_005375370 MODEL 8907005 protein-coding Slc2a11 solute carrier family 2 member 11 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); fructose transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); fructose transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955455 8374144 8399766 - 102010337 AGCD01045888;GBCE01119522;XM_005396414;XM_005396415 XP_005396471;XP_005396472 MODEL 8900622 protein-coding Rbm26 RNA binding motif protein 26 ASSOCIATED WITH acute myeloid leukemia (ortholog); anthracosis (ortholog); Breast Cancer, Familial (ortholog) NW_004955404 28116009 28198878 + 102008176 AGCD01003945;AGCD01003946;AGCD01003947;GBBH01077994;GBDF01050484;XM_013516361;XM_013516363;XM_013516366;XM_013516370 XP_013371815;XP_013371817;XP_013371820;XP_013371824 MODEL 9061272 pseudo LOC102002975 L-lactate dehydrogenase A chain pseudogene NW_004955402 36734047 36736688 - 102002975 AGCD01000933 MODEL 8884400 protein-coding Snrpd1 small nuclear ribonucleoprotein D1 polypeptide ENCODES a protein that exhibits U1 snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); connective tissue disease (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955402 10283970 10294869 + 102028039 AGCD01000256;AGCD01000257;AGCD01000258;GBDK01005303;XM_005372689;XM_005372690 XP_005372746;XP_005372747 MODEL 8964265 protein-coding LOC102019755 arylacetamide deacetylase NW_004955448 2918412 3246858 + 102019755 AGCD01041293;AGCD01041294;AGCD01041295;AGCD01041296;AGCD01041297;AGCD01041298;AGCD01041299;AGCD01041300;AGCD01041301;AGCD01041302;AGCD01041303;AGCD01041304;AGCD01041305;AGCD01041306;AGCD01041307;AGCD01041308;AGCD01041309;AGCD01041310;AGCD01041311;AGCD01041312;AGCD01041313;AGCD01041314;AGCD01041315;AGCD01041316;AGCD01041317;AGCD01041318;AGCD01041319;GBDF01135740;XM_013518616 XP_013374070 MODEL 8781231 ncrna LOC102008455 uncharacterized LOC102008455 NW_004955437 7726888 7728942 - 102008455 AGCD01034465;GBDF01111441;XR_261864;XR_261865 MODEL 8800498 protein-coding LOC102008828 uncharacterized LOC102008828 NW_004955463 7162477 7169673 + 102008828 AGCD01049720;AGCD01049721;GBDF01056767;XM_013521489 XP_013376943 MODEL 8782010 pseudo LOC102007279 magnesium transporter NIPA2 pseudogene NW_004955439 11430788 11431838 + 102007279 AGCD01035908 MODEL 8803216 protein-coding Plcxd1 phosphatidylinositol specific phospholipase C X domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955499 574421 585386 + 102023053 AGCD01063242;AGCD01063243;AGCD01063244;GBDK01020725;GBDK01033039;XM_013505584;XM_013505585;XM_013505586;XM_013505587;XM_013505588 XP_013361038;XP_013361039;XP_013361040;XP_013361041;XP_013361042 MODEL 8872107 ncrna LOC102009985 uncharacterized LOC102009985 NW_004955532 2292201 2295717 + 102009985 AGCD01070223;GBDF01097912;XR_264728 MODEL 39133313 snrna U4 U4 spliceosomal RNA 8845227 protein-coding Trip11 thyroid hormone receptor interactor 11 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN bone development (ortholog); cartilage development (ortholog); chondrocyte differentiation involved in endochondral bone morphogenesis (ortholog); ASSOCIATED WITH achondrogenesis type IA (ortholog); acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); FOUND IN acrosomal membrane (ortholog); cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955438 14327400 14394022 - 102022016 AGCD01035343;AGCD01035344;AGCD01035345;GBDK01231119;XM_013517219 XP_013372673 MODEL 9039450 pseudo LOC102005802 60S ribosomal protein L37 pseudogene NW_004955416 8201222 8202250 - 102005802 AGCD01017037;XR_260372 MODEL 39134228 snorna SNORD36 Small nucleolar RNA SNORD36 9062428 protein-coding Vwce von Willebrand factor C and EGF domains ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955511 6235934 6251186 + 102018755 AGCD01066598;GBCQ01151731;XM_005408169 XP_005408226 MODEL 8800101 protein-coding Btbd2 BTB domain containing 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955495 6072112 6085180 + 102022403 AGCD01062049;AGCD01062050;GBBH01062338;GBDF01084039;XM_005405935 XP_005405992 MODEL 8924632 protein-coding Prdm2 PR/SET domain 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone H3K9 methyltransferase activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955527 4005410 4105376 - 102017379 AGCD01069493;AGCD01069494;AGCD01069495;AGCD01069496;GBBH01115652;GBBH01165184;XM_013507399 XP_013362853 MODEL 8968262 protein-coding Tph1 tryptophan hydroxylase 1 ENCODES a protein that exhibits tryptophan 5-monooxygenase activity (ortholog); INVOLVED IN bone remodeling (ortholog); circadian rhythm (ortholog); mammary gland alveolus development (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN cytoplasm (ortholog) NW_004955414 32803417 32828682 - 102014235 AGCD01015783;XM_005380396;XM_013511753;XM_013511754 XP_005380453;XP_013367207;XP_013367208 MODEL 8977296 protein-coding Pgghg protein-glucosylgalactosylhydroxylysine glucosidase ENCODES a protein that exhibits protein-glucosylgalactosylhydroxylysine glucosidase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) NW_004955476 11749483 11754008 - 102027522 AGCD01055474;GBCE01030057;XM_013502909;XM_013502910;XM_013502911;XM_013502912;XM_013502913;XM_013502914 XP_013358363;XP_013358364;XP_013358365;XP_013358366;XP_013358367;XP_013358368 MODEL 39133009 snrna U1 U1 spliceosomal RNA 730469313 snorna SNORA28 Small nucleolar RNA SNORA28 8922302 pseudo LOC102016241 retinol dehydrogenase 16-like NW_004955458 4555322 4561003 - 102016241 AGCD01047418 MODEL 8707427 protein-coding Ep400 E1A binding protein p400 ENCODES a protein that exhibits chromatin binding (ortholog); protein antigen binding (ortholog); INVOLVED IN gene expression (ortholog); nervous system development (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955482 639316 746331 - 102022599 AGCD01057180;AGCD01057181;AGCD01057182;AGCD01057183;AGCD01057184;AGCD01057185;AGCD01057186;GBCQ01006240;XM_005402961;XM_013503598;XM_013503599;XM_013503600;XM_013503601;XM_013503602;XM_013503603;XM_013503604;XM_013503605;XM_013503606;XM_013503607;XM_013503608 XP_005403018;XP_013359052;XP_013359053;XP_013359054;XP_013359055;XP_013359056;XP_013359057;XP_013359058;XP_013359059;XP_013359060;XP_013359061;XP_013359062 MODEL 8746088 ncrna LOC102006159 uncharacterized LOC102006159 NW_004955526 3480118 3482226 - 102006159 AGCD01069336;GBDF01015650;XR_264662 MODEL 10329818 ncrna LOC106147415 uncharacterized LOC106147415 NW_004955408 11565450 11574683 - 106147415 AGCD01008312;XR_001232315 MODEL 8723191 protein-coding Prr5l proline rich 5 like ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); positive regulation of intracellular protein transport (ortholog); positive regulation of mRNA catabolic process (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN TORC2 complex (ortholog) NW_004955422 9972588 10069411 - 102005481 AGCD01022726;AGCD01022727;AGCD01022728;AGCD01022729;AGCD01022730;GBDK01140964;XM_005384107;XM_005384108;XM_005384112;XM_005384114;XM_005384115;XM_005384116;XM_013514246;XM_013514247;XM_013514248;XM_013514249 XP_005384164;XP_005384165;XP_005384169;XP_005384171;XP_005384172;XP_005384173;XP_013369700;XP_013369701;XP_013369702;XP_013369703 MODEL 150537113 snorna SNORA13 Small nucleolar RNA SNORA13 8745588 protein-coding Rps28 ribosomal protein S28 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); ribosomal small subunit biogenesis (ortholog); ribosome biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 15 with mandibulofacial dysostosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic small ribosomal subunit (ortholog) NW_004955563 1073556 1074149 - 102015161 AGCD01074111;GBCQ01007669;XM_005413132 XP_005413189 MODEL 8723359 pseudo LOC102011156 glutathione S-transferase alpha-3 pseudogene NW_004955446 4760282 4767429 + 102011156 AGCD01040045 MODEL 8706988 protein-coding Pten phosphatase and tensin homolog ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); beta-catenin binding (ortholog); enzyme binding (ortholog); INVOLVED IN adult behavior (ortholog); angiogenesis (ortholog); apoptotic process (ortholog); PARTICIPATES IN altered phosphatidylinositol 3-kinase signaling pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; endometrial cancer pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955425 5007811 5091829 - 102026655 AGCD01025329;AGCD01025330;AGCD01025331;AGCD01025332;GBDJ01081006;XM_013514767 XP_013370221 MODEL 8827240 pseudo LOC102013182 pre-mRNA-splicing factor SPF27 pseudogene NW_004955494 8279287 8279936 - 102013182 AGCD01061582 MODEL 8775596 protein-coding Slc2a12 solute carrier family 2 member 12 INVOLVED IN D-glucose transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN cell junction (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955439 2482440 2539510 + 102007699 AGCD01035651;AGCD01035652;GBDF01156647;XM_005390508;XM_005390509;XM_013517402 XP_005390565;XP_005390566;XP_013372856 MODEL 8845253 ncrna LOC102022281 uncharacterized LOC102022281 NW_004955476 9313471 9320745 + 102022281 AGCD01055382;GBDF01119901;XR_263628;XR_263629 MODEL 8873605 protein-coding LOC102008080 cytochrome c-like NW_004955413 7665162 7665698 - 102008080 AGCD01013828;GBDF01269962;XM_005378936 XP_005378993 MODEL 8931799 protein-coding Rps29 ribosomal protein S29 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); zinc ion binding (ortholog); INVOLVED IN cytoplasmic translation (ortholog); positive regulation of apoptotic process (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH cervical cancer (ortholog); Diamond-Blackfan anemia 13 (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955409 13056022 13057530 + 102003841 AGCD01009587;GBDF01001676;XM_005376848 XP_005376905 MODEL 39132853 snorna SNORA73 Small nucleolar RNA SNORA73 family 9051365 protein-coding Rftn2 raftlin family member 2 INVOLVED IN dsRNA transport (ortholog); response to exogenous dsRNA (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955403 2982753 3030594 + 102013674 AGCD01001744;AGCD01001745;GBDF01055374;XM_005373263;XR_001233175 XP_005373320 MODEL 8912037 protein-coding Snrpd2 small nuclear ribonucleoprotein D2 polypeptide ENCODES a protein that exhibits U1 snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); methylosome (ortholog) NW_004955574 157769 164947 - 102018238 AGCD01075087;AGCD01075088;GBCC01043779;XM_005413802 XP_005413859 MODEL 9029469 pseudo LOC102011585 small ubiquitin-related modifier 2 pseudogene NW_004955437 7866518 7866791 + 102011585 AGCD01034470 MODEL 8980015 protein-coding Sec14l1 SEC14 like lipid binding 1 ENCODES a protein that exhibits protein sequestering activity (ortholog); RIG-I binding (ortholog); INVOLVED IN choline transport (ortholog); negative regulation of cytoplasmic pattern recognition receptor signaling pathway (ortholog); negative regulation of RIG-I signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955506 5159090 5231827 - 102016619 AGCD01065352;AGCD01065353;AGCD01065354;AGCD01065355;AGCD01065356;AGCD01065357;AGCD01065358;AGCD01065359;GBDK01074976;XM_013506067 XP_013361521 MODEL 9049328 pseudo LOC102019385 signal peptide peptidase-like 2A pseudogene NW_004955472 8166187 8167552 - 102019385 AGCD01053640 MODEL 10109534 ncrna LOC106150315 uncharacterized LOC106150315 NW_004955471 5014497 5024132 - 106150315 AGCD01053094;XR_001237048 MODEL 8820198 protein-coding Ppfia4 PPFI scaffold protein A4 ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955406 39047069 39094663 + 102006420 AGCD01006618;GBCE01131582;XM_013522498;XM_013522500;XM_013522503;XM_013522514;XR_001236928;XR_001236930;XR_001236934 XP_013377952;XP_013377954;XP_013377957;XP_013377968 MODEL 8904569 pseudo LOC102010786 sodium- and chloride-dependent creatine transporter 1 pseudogene NW_004955412 1303340 1305225 + 102010786 AGCD01012514;XM_005378613 MODEL 8927694 protein-coding Plcxd2 phosphatidylinositol specific phospholipase C X domain containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955427 12094403 12143557 + 102021373 AGCD01027203;AGCD01027204;GBDF01277030;XM_005386368;XM_005386369;XM_013515219 XP_005386425;XP_005386426;XP_013370673 MODEL 9009717 protein-coding Pnpo pyridoxamine 5'-phosphate oxidase ENCODES a protein that exhibits FMN binding (ortholog); protein homodimerization activity (ortholog); pyridoxal phosphate binding (ortholog); INVOLVED IN pyridoxal 5'-phosphate biosynthetic process (ortholog); vitamin B6 metabolic process (ortholog); PARTICIPATES IN hypophosphatasia pathway; vitamin B6 metabolic pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autosomal dominant distal hereditary motor neuronopathy 5 (ortholog); benign neonatal seizures (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955451 13184861 13190933 - 102011938 AGCD01043458;GBDI01173325;XM_005394258 XP_005394315 MODEL 8893272 protein-coding Rnh1 ribonuclease/angiogenin inhibitor 1 ENCODES a protein that exhibits ribonuclease inhibitor activity (ortholog); INVOLVED IN regulation of angiogenesis (ortholog); tRNA stabilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN angiogenin-PRI complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955476 11543006 11549391 + 102022386 AGCD01055466;GBCE01031473;GBDF01195202;XM_013502925;XM_013502926 XP_013358379;XP_013358380 MODEL 9046128 protein-coding Sesn1 sestrin 1 ENCODES a protein that exhibits L-leucine binding (ortholog); INVOLVED IN cellular oxidant detoxification (ortholog); cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); GATOR2 complex (ortholog) NW_004955411 34033986 34051171 - 102015489 AGCD01012378;AGCD01012379;GBCB01023930;GBDF01121431;XM_013510807 XP_013366261 MODEL 9042100 protein-coding Rad9b RAD9 checkpoint clamp component B ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955482 7405520 7459240 + 102023472 AGCD01057466;AGCD01057467;AGCD01057468;GBDF01050748;XM_005403153;XM_005403154;XM_013503652;XM_013503653;XM_013503654;XM_013503655 XP_005403210;XP_005403211;XP_013359106;XP_013359107;XP_013359108;XP_013359109 MODEL 8934565 protein-coding Rmdn1 regulator of microtubule dynamics 1 ENCODES a protein that exhibits microtubule binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); mitochondrion (ortholog); mitotic spindle pole (ortholog) NW_004955417 4067981 4092421 - 102006772 AGCD01017937;GBBH01050987;GBDK01316896;XM_005381750 XP_005381807 MODEL 8923832 pseudo LOC102003992 aldose reductase-related protein 2 pseudogene NW_004955430 5217088 5218084 + 102003992 AGCD01029256 MODEL 8774380 protein-coding LOC102005443 keratin-associated protein 20-1-like NW_004955407 30075930 30076100 + 102005443 AGCD01007625;XM_005375636 XP_005375693 MODEL 8772562 protein-coding Pik3c2g phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma ENCODES a protein that exhibits 1-phosphatidylinositol 4-kinase activity (ortholog); 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-4-phosphate 3-kinase activity (ortholog); INVOLVED IN chemotaxis (ortholog); phosphatidylinositol-3-phosphate biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); coronary artery disease (ortholog); FOUND IN membrane (ortholog); nuclear envelope (ortholog) NW_004955413 14454376 14764323 + 102010887 AGCD01014046;AGCD01014047;AGCD01014048;AGCD01014049;AGCD01014050;AGCD01014051;GBCE01112271;XM_005379037;XM_005379038;XM_005379039 XP_005379094;XP_005379095;XP_005379096 MODEL 9012517 ncrna LOC102012000 uncharacterized LOC102012000 NW_004955423 27287604 27301513 + 102012000 AGCD01024120;AGCD01024121;GBCE01127032;XR_001234059 MODEL 8718414 protein-coding Thsd4 thrombospondin type 1 domain containing 4 INVOLVED IN elastic fiber assembly (ortholog); microfibril assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); microfibril (ortholog) NW_004955450 5296670 5827252 - 102009131 AGCD01042499;AGCD01042500;AGCD01042501;AGCD01042502;AGCD01042503;AGCD01042504;AGCD01042505;AGCD01042506;AGCD01042507;AGCD01042508;AGCD01042509;AGCD01042510;GBBH01142626;GBCQ01066873;XM_013518949 XP_013374403 MODEL 8709807 pseudo LOC102008830 ATP synthase F(0) complex subunit C3, mitochondrial pseudogene NW_004955464 13405011 13405720 + 102008830 AGCD01050275 MODEL 8814219 ncrna LOC102007282 uncharacterized LOC102007282 NW_004955442 18390450 18391001 - 102007282 AGCD01038005;GBDK01116847;XR_001235431 MODEL 8804133 ncrna LOC102006162 uncharacterized LOC102006162 NW_004955534 59116 62830 + 102006162 AGCD01070434;AGCD01070435;XR_264754 MODEL 39133316 snrna U4 U4 spliceosomal RNA 8854057 protein-coding Sptb spectrin beta, erythrocytic ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ankyrin binding (ortholog); INVOLVED IN hemopoiesis (ortholog); modification of postsynaptic actin cytoskeleton (ortholog); plasma membrane organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); bilirubin metabolic disorder (ortholog); FOUND IN cell surface (ortholog); cortical cytoskeleton (ortholog); glutamatergic synapse (ortholog) NW_004955466 5013963 5170186 + 102026411 AGCD01050865;AGCD01050866;AGCD01050867;AGCD01050868;GBDF01303785;XM_005399117;XM_013521954;XM_013521955;XM_013521956 XP_005399174;XP_013377408;XP_013377409;XP_013377410 MODEL 8950643 pseudo LOC102008467 E3 ubiquitin-protein ligase HECTD3 pseudogene NW_004955442 14068251 14074752 - 102008467 AGCD01037801 MODEL 8766720 protein-coding Trip12 thyroid hormone receptor interactor 12 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN DNA repair-dependent chromatin remodeling (ortholog); heterochromatin boundary formation (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955453 5132776 5272250 + 102029932 AGCD01044705;AGCD01044706;GBDF01007218;XM_005395422;XM_005395424;XM_005395425;XM_005395426;XM_005395427;XM_005395428;XM_005395429;XM_005395430;XM_013519820;XM_013519821;XM_013519822 XP_005395479;XP_005395481;XP_005395482;XP_005395483;XP_005395484;XP_005395485;XP_005395486;XP_005395487;XP_013375274;XP_013375275;XP_013375276 MODEL 9013002 protein-coding Prdm4 PR/SET domain 4 ENCODES a protein that exhibits death receptor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone methyltransferase binding (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); cellular response to nutrient (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); histone methyltransferase complex (ortholog); nucleoplasm (ortholog) NW_004955405 41335019 41354625 - 102028263 AGCD01005547;GBCB01088054;XM_005374642;XM_005374643 XP_005374699;XP_005374700 MODEL 8862508 ncrna LOC102018180 uncharacterized LOC102018180 NW_004955416 11264103 11270327 - 102018180 AGCD01017181;GBDF01051838;XR_001233298 MODEL 8729035 protein-coding Rbm27 RNA binding motif protein 27 NW_004955415 7829022 7901617 - 102016698 AGCD01016058;GBDI01261789;XM_005380675;XM_005380676;XM_005380677;XM_005380678 XP_005380732;XP_005380733;XP_005380734;XP_005380735 MODEL 8954281 ncrna LOC102005805 uncharacterized LOC102005805 NW_004955417 31526897 31527811 + 102005805 AGCD01018654;GBDI01226891;XR_260525 MODEL 8737570 protein-coding LOC102011157 olfactory receptor 2B11-like NW_004955576 1315227 1322081 + 102011157 AGCD01075372;XM_005413952 XP_005414009 MODEL 8869251 protein-coding LOC102002978 zinc finger protein 14-like NW_004955607 144382 181560 + 102002978 AGCD01076977;GBCB01041249;XM_013510111;XM_013510112;XM_013510113 XP_013365565;XP_013365566;XP_013365567 MODEL 626189180 snorna SNORA46 Small nucleolar RNA SNORA46 8903147 pseudo LOC102022286 WW domain-binding protein 11 pseudogene NW_004955479 5664384 5666264 - 102022286 AGCD01056360 MODEL 8967123 protein-coding Spart spartin ENCODES a protein that exhibits lipid binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN adipose tissue development (ortholog); cell division (ortholog); lipid droplet organization (ortholog); ASSOCIATED WITH Cognitive Dysfunction (ortholog); Developmental Disabilities (ortholog); disease by infectious agent (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955431 9758159 9786468 + 102029649 AGCD01030193;AGCD01030194;GBDF01133087;XM_005387685;XM_005387686 XP_005387742;XP_005387743 MODEL 730469269 snorna SNORA28 Small nucleolar RNA SNORA28 8923251 protein-coding Tph2 tryptophan hydroxylase 2 ENCODES a protein that exhibits tryptophan 5-monooxygenase activity (ortholog); INVOLVED IN cellular response to lithium ion (ortholog); circadian rhythm (ortholog); response to activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute stress disorder (ortholog); alcohol use disorder (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); neuron projection (ortholog) NW_004955405 11877474 11981035 + 102005552 AGCD01004844;GBDI01275596;XM_005374324;XM_013517642;XM_013517643;XM_013517645 XP_005374381;XP_013373096;XP_013373097;XP_013373099 MODEL 8909102 pseudo LOC102019756 coilin pseudogene NW_004955402 35710345 35712921 + 102019756 AGCD01000896;XM_005372931 MODEL 8967431 protein-coding Epas1 endothelial PAS domain protein 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); cobalt ion binding (ortholog); DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel remodeling (ortholog); cell differentiation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute kidney failure (ortholog); azoospermia (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955441 13244626 13328220 + 102011250 AGCD01037146;AGCD01037147;AGCD01037148;GBBH01002906;XM_005390973 XP_005391030 MODEL 730469206 snorna SNORA14 Small nucleolar RNA SNORA14 9042158 protein-coding Btbd3 BTB domain containing 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cerebral cortex development (ortholog); dendrite morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955415 21588669 21602990 + 102027294 AGCD01016513;GBDF01221665;XM_005380880;XM_005380882;XM_013512365 XP_005380937;XP_005380939;XP_013367819 MODEL 8889248 protein-coding Pggt1b protein geranylgeranyltransferase type I subunit beta ENCODES a protein that exhibits CAAX-protein geranylgeranyltransferase activity (ortholog); heterocyclic compound binding (ortholog); peptide binding (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); positive regulation of cell cycle (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Lung Neoplasms (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN CAAX-protein geranylgeranyltransferase complex (ortholog) NW_004955408 34994545 35049037 - 102022470 AGCD01008927;AGCD01008928;AGCD01008929;GBDI01357863;XM_005376520 XP_005376577 MODEL 8769505 protein-coding Snrpd3 small nuclear ribonucleoprotein D3 polypeptide ENCODES a protein that exhibits enzyme binding (ortholog); histone pre-mRNA DCP binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955455 8021946 8045325 + 102004141 AGCD01045870;GBDF01081549;XM_005396392 XP_005396449 MODEL 8849954 protein-coding Sesn2 sestrin 2 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); L-leucine binding (ortholog); peroxidase activity (ortholog); INVOLVED IN cellular oxidant detoxification (ortholog); cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); cytoplasm (ortholog); GATOR2 complex (ortholog) NW_004955452 7392644 7417204 + 102014203 AGCD01044151;AGCD01044152;AGCD01044153;AGCD01044154;GBBH01131789;GBDF01160814;XM_005394946 XP_005395003 MODEL 8947817 protein-coding Rnls renalase, FAD dependent amine oxidase ENCODES a protein that exhibits epinephrine binding (ortholog); monoamine oxidase activity (ortholog); NADH binding (ortholog); INVOLVED IN negative regulation of blood pressure (ortholog); negative regulation of heart rate (ortholog); response to catecholamine (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic kidney disease (ortholog); congestive heart failure (ortholog); FOUND IN extracellular region (ortholog) NW_004955425 4368620 4667947 + 102024705 AGCD01025312;AGCD01025313;AGCD01025314;AGCD01025315;AGCD01025316;AGCD01025317;AGCD01025318;AGCD01025319;AGCD01025320;GBDF01145018;XM_005385879;XM_005385880;XM_005385881;XM_013514895 XP_005385936;XP_005385937;XP_005385938;XP_013370349 MODEL 8722473 protein-coding LOC102004742 olfactory receptor 5D18-like NW_004955511 617821 618762 + 102004742 AGCD01066336;XM_005408202 XP_005408259 MODEL 8980955 pseudo LOC102013183 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955495 4683150 4684723 - 102013183 AGCD01061943 MODEL 8935083 protein-coding Pter phosphotriesterase related ENCODES a protein that exhibits N-acetyltaurine hydrolase activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); regulation of appetite (ortholog); taurine metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); Liver Neoplasms (ortholog); FOUND IN cytosol (ortholog) NW_004955429 11296833 11356082 - 102030449 AGCD01028686;AGCD01028687;GBDK01220368;XM_005386971;XM_013515555;XM_013515556;XM_013515557 XP_005387028;XP_013371009;XP_013371010;XP_013371011 MODEL 39132868 snrna U1 U1 spliceosomal RNA 8749502 protein-coding Vwde von Willebrand factor D and EGF domains ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955432 18687192 18752679 - 102003368 AGCD01031157;AGCD01031158;AGCD01031159;XM_005388152 XP_005388209 MODEL 8933647 ncrna LOC102016243 uncharacterized LOC102016243 NW_004955460 2040343 2061691 - 102016243 AGCD01048386;XR_263025 MODEL 39132856 snorna SNORA73 Small nucleolar RNA SNORA73 family 8779755 protein-coding Rps3 ribosomal protein S3 ENCODES a protein that exhibits class I DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); damaged DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to nerve growth factor stimulus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chromosomal Instability (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955414 16436899 16442325 - 102026628 AGCD01015214;GBDJ01025673;XM_005379890 XP_005379947 MODEL 8938628 protein-coding Thsd7a thrombospondin type 1 domain containing 7A INVOLVED IN actin cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog); podocyte foot (ortholog) NW_004955432 17896273 18111903 - 102003051 AGCD01031132;AGCD01031133;AGCD01031134;GBCE01162918;GBDJ01062851;XM_005388151 XP_005388208 MODEL 8844251 ncrna LOC102019386 uncharacterized LOC102019386 NW_004955415 31794197 31797398 + 102019386 AGCD01016697;GBDF01178246;XR_001233216;XR_260331 MODEL 8826626 protein-coding LOC102010789 histone H1.0 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN chromosome condensation (ortholog); heterochromatin formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); euchromatin (ortholog) NW_004955413 24182547 24184588 + 102010789 AGCD01014355;GBBH01030914;XM_005379227 XP_005379284 MODEL 150537112 snorna SNORD37 Small nucleolar RNA SNORD37 9014306 pseudo LOC102011588 uncharacterized LOC102011588 NW_004955437 2264085 2299089 - 102011588 AGCD01034263 MODEL 8748095 protein-coding Slc2a13 solute carrier family 2 member 13 ENCODES a protein that exhibits ATPase binding (ortholog); myo-inositol transmembrane transporter activity (ortholog); myo-inositol:proton symporter activity (ortholog); INVOLVED IN myo-inositol transport (ortholog); positive regulation of amyloid-beta formation (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN astrocyte end-foot (ortholog); bounding membrane of organelle (ortholog); cell body (ortholog) NW_004955505 395380 664272 + 102003159 AGCD01064957;AGCD01064958;AGCD01064959;AGCD01064960;AGCD01064961;GBDK01214301;XM_013505919 XP_013361373 MODEL 8871840 protein-coding Prr7 proline rich 7, synaptic ENCODES a protein that exhibits long-chain fatty acid binding (ortholog); protein tyrosine kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); postsynapse to nucleus signaling pathway (ortholog); regulation of transcription by RNA polymerase I (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); neuron projection (ortholog) NW_004955408 29685254 29695113 + 102026192 AGCD01008766;GBBH01064463;XM_005376435;XM_013509844 XP_005376492;XP_013365298 MODEL 10141147 ncrna LOC106150316 uncharacterized LOC106150316 NW_004955471 5077293 5081932 + 106150316 AGCD01053095;XR_001237049 MODEL 8723177 pseudo LOC102003996 40S ribosomal protein S20 pseudogene NW_004955513 5462592 5467878 + 102003996 AGCD01066971 MODEL 8860724 protein-coding LOC102008468 vomeronasal type-2 receptor 116-like NW_004955563 153803 168288 + 102008468 AGCD01074047;AGCD01074048;AGCD01074049;XM_005413196 XP_005413253 MODEL 8706379 protein-coding Pnpt1 polyribonucleotide nucleotidyltransferase 1 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); identical protein binding (ortholog); miRNA binding (ortholog); INVOLVED IN cellular response to interferon-beta (ortholog); cellular response to oxidative stress (ortholog); liver regeneration (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Ataxia (ortholog); autosomal recessive nonsyndromic deafness 70 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955424 27407451 27449830 + 102006366 AGCD01025116;AGCD01025117;GBBH01149997;XM_005385770;XM_013514724 XP_005385827;XP_013370178 MODEL 8773874 pseudo LOC102005444 zinc finger protein 649-like NW_004955408 34633994 34635786 + 102005444 AGCD01008914 MODEL 9007008 pseudo LOC102008087 Y+L amino acid transporter 2 pseudogene NW_004955472 118385 120399 + 102008087 AGCD01053315 MODEL 9042655 protein-coding Sec14l2 SEC14 like lipid binding 2 ENCODES a protein that exhibits enzyme activator activity (ortholog); transferase activity, transferring alkyl or aryl (other than methyl) groups (ortholog); INVOLVED IN positive regulation of cholesterol biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955455 4637062 4660064 + 102020881 AGCD01045684;GBDF01123633;XM_005396260 XP_005396317 MODEL 8937130 protein-coding Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); phosphatidylinositol kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome maturation (ortholog); autophagy (ortholog); PARTICIPATES IN autophagy pathway; inositol metabolic pathway; phosphatidylinositol 3-kinase signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN autolysosome (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955402 28081150 28195305 + 102021065 AGCD01000717;AGCD01000718;AGCD01000719;AGCD01000720;AGCD01000721;GBDJ01421951;GBDJ01421952;XM_005372847 XP_005372904 MODEL 8748231 ncrna LOC102011163 uncharacterized LOC102011163 NW_004955450 15153068 15157236 - 102011163 AGCD01042782;GBCB01071256;XR_001235830;XR_001235831 MODEL 8922155 pseudo LOC102005812 G kinase-anchoring protein 1 pseudogene NW_004955488 1169951 1171056 + 102005812 AGCD01059491 MODEL 9011031 protein-coding LOC102009987 trem-like transcript 4 protein NW_004955437 7799753 7806865 - 102009987 AGCD01034469;GBBH01047078;XM_005389681;XM_013517047;XM_013517048 XP_005389738;XP_013372501;XP_013372502 MODEL 8772556 ncrna LOC102007285 uncharacterized LOC102007285 NW_004955447 3220418 3236619 + 102007285 AGCD01040582;GBCQ01008302;XR_262410 MODEL 8791026 protein-coding Tpi1 triosephosphate isomerase 1 ENCODES a protein that exhibits isomerase activity (ortholog); protein homodimerization activity (ortholog); triose-phosphate isomerase activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); gluconeogenesis (ortholog); glucose metabolic process (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose and mannose metabolic pathway; fructose-1,6-bisphosphatase deficiency pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Animal Disease Models (ortholog); carbohydrate metabolic disorder (ortholog); FOUND IN cytosol (ortholog) NW_004955413 4467615 4471594 + 102005919 AGCD01013617;GBDF01008105;XM_005378838 XP_005378895 MODEL 9059602 protein-coding Rfwd3 ring finger and WD repeat domain 3 ENCODES a protein that exhibits MDM2/MDM4 family protein binding (ortholog); p53 binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); interstrand cross-link repair (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Fanconi anemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955484 2824057 2857321 + 102025010 AGCD01058136;AGCD01058137;AGCD01058138;AGCD01058139;AGCD01058140;AGCD01058141;AGCD01058142;GBDJ01316140;XM_005403457;XM_005403458;XM_005403460;XM_005403461;XM_005403462;XM_013503864 XP_005403514;XP_005403515;XP_005403517;XP_005403518;XP_005403519;XP_013359318 MODEL 8920125 protein-coding Plcxd3 phosphatidylinositol specific phospholipase C X domain containing 3 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) NW_004955426 25563222 25719939 - 102026768 AGCD01026723;AGCD01026724;AGCD01026725;AGCD01026726;AGCD01026727;AGCD01026728;GBCQ01014740;XM_005386247 XP_005386304 MODEL 8894931 protein-coding Ppfibp1 PPFIB scaffold protein 1 INVOLVED IN cortical microtubule organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell cortex (ortholog); plasma membrane (ortholog) NW_004955505 7191751 7394506 - 102021579 AGCD01065201;AGCD01065202;AGCD01065203;AGCD01065204;GBCQ01071728;XM_005407163;XM_005407168;XM_005407169;XM_013505927;XM_013505928;XM_013505929;XM_013505930;XM_013505931;XM_013505932;XM_013505933 XP_005407220;XP_005407225;XP_005407226;XP_013361381;XP_013361382;XP_013361383;XP_013361384;XP_013361385;XP_013361386;XP_013361387 MODEL 39133318 snrna U4 U4 spliceosomal RNA 8728830 protein-coding Rmdn2 regulator of microtubule dynamics 2 ENCODES a protein that exhibits microtubule binding (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); sarcoma (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); mitotic spindle (ortholog) NW_004955441 5710487 5776351 + 102008032 AGCD01036882;AGCD01036883;AGCD01036884;AGCD01036885;AGCD01036886;GBBH01082805;XM_005390877;XM_005390880;XM_013517543;XM_013517544 XP_005390934;XP_005390937;XP_013372997;XP_013372998 MODEL 8895606 protein-coding LOC102012002 probable N-acetyltransferase CML1 NW_004955424 12018064 12026229 + 102012002 AGCD01024589;GBCQ01036370;XM_005385547;XM_005385548;XM_005385549;XM_005385551;XM_013514658;XM_013514659;XM_013514660;XM_013514661 XP_005385604;XP_005385605;XP_005385606;XP_005385608;XP_013370112;XP_013370113;XP_013370114;XP_013370115 MODEL 8850916 ncrna LOC102018185 uncharacterized LOC102018185 NW_004955481 6299681 6301761 - 102018185 AGCD01057023;GBCE01032788;XR_263784 MODEL 10071277 ncrna LOC106147416 uncharacterized LOC106147416 NW_004955408 11683044 11687252 + 106147416 AGCD01008314;XR_001232317 MODEL 9058576 protein-coding Rnmt RNA guanine-7 methyltransferase ENCODES a protein that exhibits mRNA 5'-cap (guanine-N7-)-methyltransferase activity (ortholog); RNA binding (ortholog); INVOLVED IN 7-methylguanosine mRNA capping (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN 5'-end pre-mRNA capping pathway; homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN fibrillar center (ortholog); methyltransferase complex (ortholog); mRNA cap methyltransferase RNMT:RAMAC complex (ortholog) NW_004955402 319520 344129 - 102009900 AGCD01000016;AGCD01000017;GBBH01005722;GBBH01005724;XM_013512465;XM_013512502 XP_013367919;XP_013367956 MODEL 8848038 protein-coding LOC102006164 24-hydroxycholesterol 7-alpha-hydroxylase ENCODES a protein that exhibits 24S-hydroxycholesterol 7-alpha-hydroxylase activity (ortholog); steroid 7-alpha-hydroxylase activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); cholesterol catabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955437 11444780 11497268 - 102006164 AGCD01034574;GBDK01017216;XM_005389856 XP_005389913 MODEL 8852042 protein-coding Spast spastin ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); axonal transport of mitochondrion (ortholog); cytokinetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cerebral palsy (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955441 471609 521920 + 102021282 AGCD01036708;AGCD01036709;AGCD01036710;GBDF01089066;GBDI01079613;XM_013517607 XP_013373061 MODEL 730469432 snorna SNORA28 Small nucleolar RNA SNORA28 8762354 protein-coding Pgk1 phosphoglycerate kinase 1 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); phosphoglycerate kinase activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); cellular response to hypoxia (ortholog); epithelial cell differentiation (ortholog); PARTICIPATES IN gluconeogenesis pathway; glycolysis pathway; hypoxia inducible factor pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); generalized epilepsy (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); membrane raft (ortholog) NW_004955557 1566534 1584799 + 102021398 AGCD01073300;GBDJ01005368;XM_005412630 XP_005412687 MODEL 8940649 protein-coding Trip13 thyroid hormone receptor interactor 13 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN double-strand break repair (ortholog); female meiosis I (ortholog); male meiosis I (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Aneuploidy (ortholog); Breast Cancer, Familial (ortholog); FOUND IN male germ cell nucleus (ortholog) NW_004955504 434187 452636 + 102029767 AGCD01064819;GBDF01223456;XM_005407032 XP_005407089 MODEL 8912126 pseudo LOC102019757 calcyclin-binding protein pseudogene NW_004955593 833159 833718 - 102019757 AGCD01076401 MODEL 730469572 snorna SNORA15 Small nucleolar RNA SNORA15 8816883 protein-coding Epb41 erythrocyte membrane protein band 4.1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); actin binding (ortholog); phosphoprotein binding (ortholog); INVOLVED IN positive regulation of protein localization to cell cortex (ortholog); protein-containing complex assembly (ortholog); regulation of calcium ion transport (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Elliptocytosis 1 (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell cortex (ortholog); cortical cytoskeleton (ortholog) NW_004955452 7930095 8123165 + 102021512 AGCD01044202;AGCD01044203;AGCD01044204;AGCD01044205;AGCD01044206;AGCD01044207;AGCD01044208;AGCD01044209;GBBH01033044;XM_005394970;XM_013519473;XM_013519474;XM_013519475;XM_013519476;XM_013519477;XM_013519478 XP_005395027;XP_013374927;XP_013374928;XP_013374929;XP_013374930;XP_013374931;XP_013374932 MODEL 9060620 protein-coding Btbd6 BTB domain containing 6 NW_004955538 3494950 3496888 + 102005179 AGCD01071166;GBBH01033922;GBCE01001883;XM_005410859 XP_005410916 MODEL 730469018 snorna SNORD38 Small nucleolar RNA SNORD38 8891192 protein-coding Sptbn1 spectrin beta, non-erythrocytic 1 ENCODES a protein that exhibits ankyrin binding (ortholog); GTPase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); central nervous system development (ortholog); central nervous system formation (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); aortic aneurysm (ortholog); aortic valve insufficiency (ortholog); FOUND IN axolemma (ortholog); cortical cytoskeleton (ortholog); cuticular plate (ortholog) NW_004955441 20248578 20378038 + 102005304 AGCD01037400;GBDF01051818;XM_005391031;XM_005391032;XM_005391034;XM_005391035 XP_005391088;XP_005391089;XP_005391091;XP_005391092 MODEL 8734597 protein-coding Slc2a2 solute carrier family 2 member 2 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); dehydroascorbic acid transmembrane transporter activity (ortholog); fructose transmembrane transporter activity (ortholog); INVOLVED IN carbohydrate utilization (ortholog); cellular response to fatty acid (ortholog); D-glucose transmembrane transport (ortholog); PARTICIPATES IN facilitative sugar transporter mediated glucose transport pathway; Fanconi syndrome pathway; forkhead class A signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); diabetes mellitus (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border (ortholog) NW_004955420 1101769 1129672 - 102025012 AGCD01020568;XM_005382995 XP_005383052 MODEL 8700366 protein-coding LOC102008833 olfactory receptor 1F12 NW_004955465 13529663 13530604 + 102008833 AGCD01050613;XM_005398956 XP_005399013 MODEL 9037750 protein-coding Snrpe small nuclear ribonucleoprotein polypeptide E ENCODES a protein that exhibits U1 snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); methylosome (ortholog) NW_004955406 39725841 39732527 + 102016018 AGCD01006633;GBDJ01075700;XM_005375279 XP_005375336 MODEL 39133843 snorna SNORA47 Small nucleolar RNA SNORA47 8731982 protein-coding LOC102002979 olfactory receptor 4F17-like NW_004955614 313170 316184 - 102002979 AGCD01077239;GBDF01177112;XM_013510137 XP_013365591 MODEL 8870975 protein-coding Sesn3 sestrin 3 INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to glucose starvation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); GATOR2 complex (ortholog); TORC2 complex (ortholog) NW_004955412 100335 125395 - 102027390 AGCD01012481;GBBH01141125;GBDF01041588;XM_013511114 XP_013366568 MODEL 8825383 protein-coding Radil Rap associating with DIL domain INVOLVED IN substrate adhesion-dependent cell spreading (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN microtubule (ortholog); protein-containing complex (ortholog) NW_004955460 10906944 10990369 + 102005905 AGCD01048623;AGCD01048624;AGCD01048625;AGCD01048626;GBDF01126679;XM_005397849;XM_013521246 XP_005397906;XP_013376700 MODEL 8977400 pseudo LOC102004744 UMP-CMP kinase pseudogene NW_004955515 4019058 4025494 - 102004744 AGCD01067313 MODEL 8852667 protein-coding Vwf von Willebrand factor ENCODES a protein that exhibits collagen binding (ortholog); identical protein binding (ortholog); immunoglobulin binding (ortholog); INVOLVED IN activation of blood coagulation via clotting cascade (ortholog); blood coagulation (ortholog); cell adhesion (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) NW_004955413 3672470 3825588 - 102010886 AGCD01013578;AGCD01013579;AGCD01013580;AGCD01013581;AGCD01013582;AGCD01013583;AJ238385;GBDK01001413;XM_005378754;XM_005378755 CAB86185;XP_005378811;XP_005378812 MODEL 39132871 snrna U1 U1 spliceosomal RNA 8979819 ncrna LOC102011164 uncharacterized LOC102011164 NW_004955403 2029851 2035069 + 102011164 AGCD01001728;GBDF01163401;XR_001233149;XR_001233150 MODEL 39132859 snorna SNORA73 Small nucleolar RNA SNORA73 family 9041321 protein-coding Rps3a ribosomal protein S3A ENCODES a protein that exhibits mRNA 5'-UTR binding (ortholog); mRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of fibroblast proliferation (ortholog); positive regulation of translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955471 5705829 5710683 + 102022590 AGCD01053112;GBDF01007744;XM_005400892 XP_005400949 MODEL 9038066 protein-coding Tpk1 thiamin pyrophosphokinase 1 ENCODES a protein that exhibits identical protein binding (ortholog); thiamine diphosphokinase activity (ortholog); UTP thiamine diphosphokinase activity (ortholog); INVOLVED IN regulation of pyruvate decarboxylation to acetyl-CoA (ortholog); thiamine diphosphate biosynthetic process (ortholog); thiamine metabolic process (ortholog); PARTICIPATES IN thiamine metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cytosol (ortholog) NW_004955491 621941 968570 - 102006924 AGCD01060343;AGCD01060344;AGCD01060345;AGCD01060346;GBBH01166046;XM_005404730;XM_005404732;XM_013504637;XM_013504638;XM_013504639;XM_013504640 XP_005404787;XP_005404789;XP_013360091;XP_013360092;XP_013360093;XP_013360094 MODEL 9039003 ncrna LOC102011589 uncharacterized LOC102011589 NW_004955540 3450472 3456881 - 102011589 AGCD01071339;GBDF01209410;XR_001232117;XR_001232118;XR_264829 MODEL 8730478 protein-coding Rbm28 RNA binding motif protein 28 PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia, neurologic defects, and endocrinopathy syndrome (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleolus (ortholog) NW_004955479 9319132 9350261 - 102025576 AGCD01056458;AGCD01056459;AGCD01056460;GBBH01198087;GBDK01360890;XM_013503290 XP_013358744 MODEL 8890396 protein-coding Prr9 proline rich 9 NW_004955592 208102 209795 - 102008166 AGCD01076301;XM_005414607 XP_005414664 MODEL 8709801 protein-coding LOC102008469 protein FAM209B NW_004955445 2725178 2727984 - 102008469 AGCD01039364;GBDJ01263846;XM_005392264 XP_005392321 MODEL 8710326 ncrna LOC102003998 uncharacterized LOC102003998 NW_004955433 12835847 12849596 + 102003998 AGCD01031671;GBDF01156740;XR_261588 MODEL 8769859 protein-coding Prdm5 PR/SET domain 5 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); mitotic cell cycle (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH brittle cornea syndrome 1 (ortholog); brittle cornea syndrome 2 (ortholog); cervical cancer (ortholog); FOUND IN nuclear body (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955428 19684721 19881716 + 102019418 AGCD01028095;AGCD01028096;AGCD01028097;AGCD01028098;GBCQ01020388;XM_013515254 XP_013370708 MODEL 8819306 protein-coding Pnrc1 proline rich nuclear receptor coactivator 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog) NW_004955411 15837491 15841277 + 102004363 AGCD01011952;AGCD01011953;GBDF01303221;GBDJ01006301;XM_013510921 XP_013366375 MODEL 8713398 ncrna LOC102013185 uncharacterized LOC102013185 NW_004955495 5765435 5770369 - 102013185 AGCD01062026;AGCD01062027;GBDF01083739;XR_264157 MODEL 8710396 pseudo LOC102005447 rho-associated protein kinase 1-like NW_004955459 1724049 1732649 + 102005447 AGCD01047977 MODEL 8940184 ncrna LOC102010796 uncharacterized LOC102010796 NW_004955473 4935115 4942810 - 102010796 AGCD01053962;GBDK01418846;XR_001237109;XR_263580 MODEL 8836104 ncrna LOC102008088 uncharacterized LOC102008088 NW_004955415 25886988 25916316 - 102008088 AGCD01016587;GBBH01171947;XR_260315 MODEL 8979187 protein-coding Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (ortholog); insulin receptor substrate binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adipose tissue development (ortholog); autosome genomic imprinting (ortholog); PARTICIPATES IN adenosine signaling pathway; altered phosphatidylinositol 3-kinase signaling pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); adenoid cystic carcinoma (ortholog); adrenocortical carcinoma (ortholog); FOUND IN intercalated disc (ortholog); lamellipodium (ortholog); phosphatidylinositol 3-kinase complex (ortholog) NW_004955420 8355415 8427024 + 102010490 AGCD01020717;AGCD01020718;AGCD01020719;GBBH01158420;GBCQ01061380;XM_013513381 XP_013368835 MODEL 8874391 ncrna LOC102005816 uncharacterized LOC102005816 NW_004955423 3544871 3634123 + 102005816 AGCD01023515;AGCD01023516;GBDF01047727;XR_260951 MODEL 9001166 protein-coding Rmdn3 regulator of microtubule dynamics 3 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); intercellular bridge (ortholog) NW_004955416 7591049 7610164 - 102025354 AGCD01016994;AGCD01016995;GBDI01223624;XM_005381256;XM_005381257 XP_005381313;XP_005381314 MODEL 8941825 protein-coding LOC102019395 acylcarnitine hydrolase-like NW_004955484 9624869 9637807 - 102019395 AGCD01058424;GBCQ01037834;XM_005403710;XM_005403711;XM_013504017 XP_005403767;XP_005403768;XP_013359471 MODEL 8788052 pseudo LOC102022288 28S ribosomal protein S36, mitochondrial pseudogene NW_004955480 8492496 8493186 - 102022288 AGCD01056725 MODEL 8736420 protein-coding Thsd7b thrombospondin type 1 domain containing 7B ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Ehlers-Danlos syndrome classic type 1 (ortholog) NW_004955440 4054497 4834962 + 102012029 AGCD01036255;AGCD01036256;AGCD01036257;AGCD01036258;AGCD01036259;AGCD01036260;AGCD01036261;AGCD01036262;AGCD01036263;AGCD01036264;AGCD01036265;AGCD01036266;AGCD01036267;AGCD01036268;AGCD01036269;GBBH01217705;XM_013517433 XP_013372887 MODEL 8774473 protein-coding Rfx1 regulatory factor X1 ENCODES a protein that exhibits DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955415 32710135 32737918 - 102008620 AGCD01016731;AGCD01016732;GBCC01047226;XM_005381077;XM_013512197 XP_005381134;XP_013367651 MODEL 730469054 snorna SNORA16 Small nucleolar RNA SNORA16B/SNORA16A family 8786462 protein-coding LOC102016246 cytochrome c oxidase assembly factor 7 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia with axonal neuropathy 3 (ortholog); basal cell carcinoma (ortholog); genetic disease (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955464 6472158 6490618 + 102016246 AGCD01050028;AGCD01050029;GBDF01221395;XM_005398571 XP_005398628 MODEL 39133319 snrna U4 U4 spliceosomal RNA 8822421 protein-coding Ppfibp2 PPFIB scaffold protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN presynapse (ortholog) NW_004955414 23269050 23418804 + 102007883 AGCD01015496;AGCD01015497;GBDF01003858;XM_005380195;XM_005380196;XM_005380198;XM_013511943;XM_013511944;XM_013511945;XM_013511946;XM_013511948;XM_013511949;XM_013511950;XM_013511951;XM_013511952;XM_013511953 XP_005380252;XP_005380253;XP_005380255;XP_013367397;XP_013367398;XP_013367399;XP_013367400;XP_013367402;XP_013367403;XP_013367404;XP_013367405;XP_013367406;XP_013367407 MODEL 8760364 protein-coding Btbd7 BTB domain containing 7 INVOLVED IN regulation of branching involved in salivary gland morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955438 15345678 15445705 - 102004643 AGCD01035365;AGCD01035366;AGCD01035367;GBCB01121971;XM_005390344;XM_013517216;XM_013517217;XM_013517218 XP_005390401;XP_013372670;XP_013372671;XP_013372672 MODEL 8761523 pseudo LOC102018191 elongation factor 1-alpha 1-like NW_004955487 4175137 4176506 - 102018191 AGCD01059300 MODEL 730469305 snorna SNORA48 Small nucleolar RNA SNORA48 8852726 protein-coding Ptf1a pancreas associated transcription factor 1a ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); cell differentiation (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH cerebellar disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955429 5807804 5809522 - 102011348 AGCD01028536;AGCD01028537;GBDF01208599;XM_005387232 XP_005387289 MODEL 8962572 protein-coding Snrpf small nuclear ribonucleoprotein polypeptide F ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); RNA splicing (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); nasopharynx carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); methylosome (ortholog) NW_004955405 32236876 32242716 + 102007186 AGCD01005331;GBDJ01079208;XM_005374489 XP_005374546 MODEL 39132863 snorna SNORA73 Small nucleolar RNA SNORA73 family 730469517 snorna SNORA28 Small nucleolar RNA SNORA28 8932351 ncrna LOC102011165 uncharacterized LOC102011165 NW_004955403 10472232 10477715 + 102011165 AGCD01001922;GBDF01249569;XR_259169 MODEL 9005419 protein-coding Pgk2 phosphoglycerate kinase 2 ENCODES a protein that exhibits phosphoglycerate kinase activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); glycolytic process (ortholog); FOUND IN cilium (ortholog); sperm fibrous sheath (ortholog) NW_004955411 8216432 8218065 + 102005682 AGCD01011720;GBDF01002336;XM_005377668 XP_005377725 MODEL 8821393 protein-coding Trip4 thyroid hormone receptor interactor 4 ENCODES a protein that exhibits histone acetyltransferase binding (ortholog); nuclear estrogen receptor binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN estrogen receptor signaling pathway (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); centronuclear myopathy (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); neuromuscular junction (ortholog) NW_004955450 11005842 11088192 - 102017084 AGCD01042643;AGCD01042644;AGCD01042645;AGCD01042646;AGCD01042647;GBDJ01063421;XM_005393753 XP_005393810 MODEL 10252636 ncrna LOC106150317 uncharacterized LOC106150317 NW_004955471 5899639 5915207 - 106150317 AGCD01053115;GBDI01307991;XR_001237051;XR_001237052 MODEL 9049971 pseudo LOC102019758 alpha-enolase pseudogene NW_004955597 152521 155630 + 102019758 AGCD01076545 MODEL 39133747 snorna SNORD39 Small nucleolar RNA SNORD55/SNORD39 8721420 protein-coding Sec14l3 SEC14 like lipid binding 3 ASSOCIATED WITH lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955455 4681026 4692277 - 102021729 AGCD01045684;GBCE01005166;XM_005396263;XM_005396267 XP_005396320;XP_005396324 MODEL 8883826 protein-coding LOC102009989 putative uncharacterized protein encoded by LINC00521 NW_004955438 16063238 16071161 + 102009989 AGCD01035395;GBDF01002712;XM_005390358;XM_005390359;XM_005390360;XM_005390361;XM_005390362 XP_005390415;XP_005390416;XP_005390417;XP_005390418;XP_005390419 MODEL 8840746 protein-coding Plcz1 phospholipase C zeta 1 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN calcium ion transport (ortholog); egg activation (ortholog); positive regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); spermatogenic failure 17 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955413 14791750 14846327 - 102011640 AGCD01014051;AGCD01014052;AGCD01014053;GBDF01083196;XM_005379040;XM_013511282;XR_001232940;XR_260080 XP_005379097;XP_013366736 MODEL 8794075 protein-coding LOC102012004 cx9C motif-containing protein 4-like NW_004955425 2298142 2298943 - 102012004 AGCD01025257;GBDF01080910;XM_005385839 XP_005385896 MODEL 8788695 protein-coding Slc2a4 solute carrier family 2 member 4 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); D-glucose uniporter activity (ortholog); INVOLVED IN amylopectin biosynthetic process (ortholog); brown fat cell differentiation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN facilitative sugar transporter mediated glucose transport pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Cardiomegaly (ortholog); congestive heart failure (ortholog); FOUND IN cell surface (ortholog); clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog) NW_004955467 9630304 9636005 - 102022580 AGCD01051520;GBCB01005958;XM_005399526 XP_005399583 MODEL 10377262 pseudo LOC106147417 endogenous retrovirus group K member 25 Pol protein-like NW_004955557 185832 187652 - 106147417 AGCD01073230 MODEL 8881253 pseudo LOC102010800 splicing regulatory glutamine/lysine-rich protein 1-like NW_004955479 4446160 4449021 - 102010800 AGCD01056323 MODEL 9014895 protein-coding Sestd1 SEC14 and spectrin domain containing 1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN calcium channel complex (ortholog); intermediate filament cytoskeleton (ortholog) NW_004955403 17761404 17835528 + 102023421 AGCD01002086;AGCD01002087;GBDK01231007;XM_005373365;XM_005373367;XM_013512590 XP_005373422;XP_005373424;XP_013368044 MODEL 8851646 ncrna LOC102013192 uncharacterized LOC102013192 NW_004955427 8815744 8828819 + 102013192 AGCD01027078;XR_261244 MODEL 8866999 protein-coding Rae1 ribonucleic acid export 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN regulation of mitotic spindle organization (ortholog); FOUND IN fibrillar center (ortholog); mitotic spindle pole (ortholog); nuclear envelope (ortholog) NW_004955445 2069791 2084210 - 102005190 AGCD01039350;GBCE01074921;XM_005392255 XP_005392312 MODEL 39132873 snrna U1 U1 spliceosomal RNA 8903751 protein-coding Spata1 spermatogenesis associated 1 FOUND IN acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog) NW_004955423 9336208 9384727 - 102030090 AGCD01023657;GBDF01083446;GBDJ01155884;XM_005385158 XP_005385215 MODEL 8709119 protein-coding LOC102007286 prolactin-like NW_004955576 959769 969369 + 102007286 AGCD01075349;GBDK01091111;XM_005413940 XP_005413997 MODEL 8957875 protein-coding LOC102008838 V-set and immunoglobulin domain-containing protein 8 NW_004955468 11648880 11658624 - 102008838 AGCD01052136;GBDK01042318;XM_005400177;XM_005400178 XP_005400234;XP_005400235 MODEL 39132866 snorna SNORA73 Small nucleolar RNA SNORA73 family 8869620 protein-coding Rps4x ribosomal protein S4 X-linked ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of translation (ortholog); response to ethanol (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosolic ribosome (ortholog) NW_004955475 11656537 11661803 - 102013408 AGCD01055163;GBDI01007205;XM_005401686 XP_005401743 MODEL 8838874 protein-coding LOC102006165 cytochrome c-type heme lyase ENCODES a protein that exhibits heme binding (ortholog); holocytochrome-c synthase activity (ortholog); INVOLVED IN cytochrome c biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); mitochondrion (ortholog) NW_004955544 2105486 2117830 - 102006165 AGCD01071732;GBCB01062002;XM_005411390 XP_005411447 MODEL 8771443 protein-coding Vxn vexin INVOLVED IN neurogenesis (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog); plasma membrane (ortholog) NW_004955444 12659894 12684919 - 102016529 AGCD01039078;GBCQ01140368;XM_005392150;XM_005392151;XM_005392152 XP_005392207;XP_005392208;XP_005392209 MODEL 39133320 snrna U4 U4 spliceosomal RNA 8812503 protein-coding Pphln1 periphilin 1 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN constitutive heterochromatin formation (ortholog); negative regulation of gene expression, epigenetic (ortholog); negative regulation of type I interferon production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955500 1744968 1892056 + 102003041 AGCD01063681;AGCD01063682;AGCD01063683;AGCD01063684;AGCD01063685;AGCD01063686;AGCD01063687;AGCD01063688;GBBH01140452;GBDF01047222;XM_013505665;XM_013505666;XM_013505667;XM_013505668;XM_013505670;XM_013505671 XP_013361119;XP_013361120;XP_013361121;XP_013361122;XP_013361124;XP_013361125 MODEL 8953515 protein-coding LOC102008473 zinc finger protein OZF-like NW_004955569 1649162 1664829 + 102008473 AGCD01074673;AGCD01074674;GBDJ01263726;XM_013509377 XP_013364831 MODEL 8994699 protein-coding Sptbn2 spectrin beta, non-erythrocytic 2 INVOLVED IN cellular response to ethanol (ortholog); synaptic vesicle exocytosis (ortholog); vesicle-mediated transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); autosomal recessive spinocerebellar ataxia 14 (ortholog); FOUND IN cytosol (ortholog); endosome (ortholog); Golgi membrane (ortholog) NW_004955422 18659489 18699338 + 102003663 AGCD01022958;AGCD01022959;GBCE01076820;XM_005384375;XM_005384376;XM_013513886 XP_005384432;XP_005384433;XP_013369340 MODEL 8970289 protein-coding Thtpa thiamine triphosphatase ENCODES a protein that exhibits magnesium ion binding (ortholog); thiamine triphosphate phosphatase activity (ortholog); INVOLVED IN thiamine diphosphate biosynthetic process (ortholog); thiamine diphosphate metabolic process (ortholog); PARTICIPATES IN thiamine metabolic pathway; ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955409 36803721 36808094 - 102016453 AGCD01010481;AGCD01010482;GBBH01188134;XM_005377061;XM_013510425;XM_013510426;XM_013510427 XP_005377118;XP_013365879;XP_013365880;XP_013365881 MODEL 9009364 pseudo LOC102002981 non-histone chromosomal protein HMG-14 pseudogene NW_004955633 74576 86858 - 102002981 AGCD01077593;AGCD01077594;AGCD01077595;XM_005415041;XR_265177 MODEL 8792890 pseudo LOC102004004 ATPase inhibitor, mitochondrial pseudogene NW_004955533 1286264 1287849 - 102004004 AGCD01070353 MODEL 8744623 protein-coding Prrc1 proline rich coiled-coil 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955415 580812 606126 + 102030064 AGCD01015845;AGCD01015846;GBCQ01129160;GBDF01189940;XM_005380545 XP_005380602 MODEL 8805867 ncrna LOC102018192 uncharacterized LOC102018192 NW_004955491 8497950 8499449 - 102018192 AGCD01060616;GBDF01057299;XR_264041;XR_264042 MODEL 8963166 pseudo LOC102004747 40S ribosomal protein SA pseudogene NW_004955526 2686932 2687895 - 102004747 AGCD01069310 MODEL 8871234 protein-coding Rnpc3 RNA binding region (RNP1, RRM) containing 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); combined or isolated pituitary growth hormone deficiency 7 (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); U11/U12 snRNP (ortholog) NW_004955435 7951707 7974623 + 102011903 AGCD01032982;AGCD01032983;GBDF01052692;XM_005388813;XM_005388814 XP_005388870;XP_005388871 MODEL 8863145 protein-coding LOC102008089 cystatin-C-like NW_004955415 30698518 30701160 + 102008089 AGCD01016666;GBDJ01009478;XM_005380979 XP_005381036 MODEL 39132878 snrna U1 U1 spliceosomal RNA 730469176 snorna SNORA28 Small nucleolar RNA SNORA28 8794885 protein-coding LOC102019396 ATPase family AAA domain-containing protein 3 NW_004955486 9344108 9360974 - 102019396 AGCD01059177;GBDI01218980;XM_005404214;XM_005404216;XM_005404218 XP_005404271;XP_005404273;XP_005404275 MODEL 8779963 pseudo LOC102011593 tripartite motif-containing protein 44 pseudogene NW_004955441 5319595 5320576 + 102011593 AGCD01036876 MODEL 8905968 protein-coding Rfx2 regulatory factor X2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN acrosome assembly (ortholog); cellular response to leukemia inhibitory factor (ortholog); cilium assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955495 3414737 3485393 + 102017583 AGCD01061856;AGCD01061857;AGCD01061858;AGCD01061859;AGCD01061860;AGCD01061861;GBDF01044808;XM_005405732;XM_005405733;XM_005405735;XM_005405736;XM_005405737;XM_005405739;XM_005405740;XM_013505325;XM_013505326 XP_005405789;XP_005405790;XP_005405792;XP_005405793;XP_005405794;XP_005405796;XP_005405797;XP_013360779;XP_013360780 MODEL 8967674 protein-coding Rbm3 RNA binding motif protein 3 ENCODES a protein that exhibits ribosomal large subunit binding (ortholog); INVOLVED IN miRNA processing (ortholog); positive regulation of translation (ortholog); regulation of translation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); large ribosomal subunit (ortholog) NW_004955543 166891 173987 + 102020843 AGCD01071562;GBDI01000015;XM_005411265;XM_005411266;XM_005411267 XP_005411322;XP_005411323;XP_005411324 MODEL 8972541 ncrna LOC102016249 uncharacterized LOC102016249 NW_004955412 22847602 22851538 - 102016249 AGCD01013058;GBDJ01295391;XR_260010 MODEL 8702610 ncrna LOC102022290 uncharacterized LOC102022290 NW_004955418 7276604 7378661 + 102022290 AGCD01018886;AGCD01018887;AGCD01018888;AGCD01018889;AGCD01018890;GBDF01261954;XR_260543 MODEL 8950390 protein-coding Pnrc2 proline rich nuclear receptor coactivator 2 INVOLVED IN nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); P-body (ortholog) NW_004955452 3826337 3829896 + 102024081 AGCD01043949;GBCQ01004889;XM_005394788 XP_005394845 MODEL 8821769 protein-coding LOC102005821 transcription elongation factor A protein-like 3 NW_004955503 8192530 8194504 + 102005821 AGCD01064812;GBDI01313611;XM_005406978 XP_005407035 MODEL 8737484 pseudo LOC102004015 N-formyl peptide receptor 2-like NW_004955558 701686 702721 - 102004015 AGCD01073385 MODEL 8951421 protein-coding Ptgdr prostaglandin D2 receptor ENCODES a protein that exhibits prostaglandin D receptor activity (ortholog); prostaglandin J receptor activity (ortholog); INVOLVED IN adenosine metabolic process (ortholog); cellular response to prostaglandin D stimulus (ortholog); inflammatory response (ortholog); PARTICIPATES IN eicosanoid signaling pathway; prostaglandin D2 signaling pathway; ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955409 10801370 10810161 - 102011282 AGCD01009485;GBDK01397856;XM_005376785 XP_005376842 MODEL 8972223 protein-coding Raet1e retinoic acid early transcript 1E ENCODES a protein that exhibits natural killer cell lectin-like receptor binding (ortholog); INVOLVED IN natural killer cell mediated cytotoxicity (ortholog); positive regulation of natural killer cell mediated cytotoxicity (ortholog); T cell mediated cytotoxicity (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog); membrane (ortholog) NW_004955439 11413978 11420902 + 102007593 AGCD01035906;GBDF01014346;XM_013517302 XP_013372756 MODEL 8999377 protein-coding Snrpg small nuclear ribonucleoprotein polypeptide G ENCODES a protein that exhibits U1 snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); methylosome (ortholog) NW_004955424 14844318 14851720 + 102006149 AGCD01024660;GBCE01100469;XM_005385616 XP_005385673 MODEL 8881260 protein-coding LOC102011167 glycosyltransferase-like protein LARGE1 NW_004955650 55837 106695 - 102011167 AGCD01077795;AGCD01077796;AGCD01077797;AGCD01077798;AGCD01077799;GBDF01278631;GBDI01324495;XM_005415053 XP_005415110 MODEL 8861276 protein-coding Rmi1 RecQ mediated genome instability 1 INVOLVED IN double-strand break repair via homologous recombination (ortholog); glucose homeostasis (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); RecQ family helicase-topoisomerase III complex (ortholog) NW_004955432 3215372 3241840 - 102003897 AGCD01030640;AGCD01030641;AGCD01030642;AGCD01030643;GBCE01037371;GBDF01118985;XM_013516017 XP_013371471 MODEL 9058587 protein-coding Pgls 6-phosphogluconolactonase ENCODES a protein that exhibits 6-phosphogluconolactonase activity (ortholog); monosaccharide binding (ortholog); INVOLVED IN pentose-phosphate shunt (ortholog); pentose-phosphate shunt, oxidative branch (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); osteoporosis (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955524 797439 801070 - 102009981 AGCD01068709;GBDF01006033;XM_005409530;XR_001231947 XP_005409587 MODEL 730469383 snorna SNORA16 Small nucleolar RNA SNORA16B/SNORA16A family 616940634 snorna SNORD41 Small nucleolar RNA SNORD41 8964667 protein-coding Prdm8 PR/SET domain 8 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9 methyltransferase activity (ortholog); histone methyltransferase activity (ortholog); INVOLVED IN central nervous system projection neuron axonogenesis (ortholog); corpus callosum morphogenesis (ortholog); corticospinal tract morphogenesis (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH COVID-19 (ortholog); progressive myoclonus epilepsy (ortholog); progressive myoclonus epilepsy 10 (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955433 4443339 4463687 + 102007461 AGCD01031464;AGCD01031465;AGCD01031466;AGCD01031467;AGCD01031468;GBBH01191689;XM_005388496 XP_005388553 MODEL 8813919 protein-coding Sec14l4 SEC14 like lipid binding 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955455 4716470 4742277 - 102023112 AGCD01045687;AGCD01045688;GBDK01002305;XM_005396269;XM_013520472;XM_013520473;XM_013520474 XP_005396326;XP_013375926;XP_013375927;XP_013375928 MODEL 8869592 protein-coding Trip6 thyroid hormone receptor interactor 6 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); kinase binding (ortholog); INVOLVED IN chordate embryonic development (ortholog); positive regulation of cell migration (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog) NW_004955573 102649 107047 - 102012378 AGCD01074962;GBCE01054728;XM_005413686 XP_005413743 MODEL 8999547 protein-coding Rps5 ribosomal protein S5 ENCODES a protein that exhibits mRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN regulation of translational fidelity (ortholog); ribosomal small subunit biogenesis (ortholog); translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955584 1036044 1040451 + 102013027 AGCD01075975;AGCD01075976;GBDJ01001008;XM_005414373 XP_005414430 MODEL 8921146 protein-coding Pld1 phospholipase D1 ENCODES a protein that exhibits D-type glycerophospholipase activity (ortholog); INVOLVED IN cellular response to nutrient (ortholog); defense response to Gram-positive bacterium (ortholog); phosphatidic acid biosynthetic process (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); FOUND IN apical plasma membrane (ortholog); cholinergic synapse (ortholog); endocytic vesicle (ortholog) NW_004955420 1697716 1892741 - 102026748 AGCD01020576;AGCD01020577;AGCD01020578;AGCD01020579;AGCD01020580;AGCD01020581;AGCD01020582;GBDI01326771;XM_005382998;XM_005382999;XM_005383000;XM_005383002;XM_013513558;XM_013513559;XM_013513560;XM_013513561 XP_005383055;XP_005383056;XP_005383057;XP_005383059;XP_013369012;XP_013369013;XP_013369014;XP_013369015 MODEL 730469466 snorna SNORA48 Small nucleolar RNA SNORA48 9024104 pseudo LOC102012006 RWD domain-containing protein 1-like NW_004955502 2548815 2559921 - 102012006 AGCD01064301 MODEL 39131530 protein-coding BTBD9 BTB domain containing 9 8918715 protein-coding LOC102002983 uncharacterized LOC102002983 NW_004955403 53058177 53060011 - 102002983 AGCD01003030;GBDF01004642;GBDF01223597;XM_013514571 XP_013370025 MODEL 8916785 protein-coding Rps6 ribosomal protein S6 ENCODES a protein that exhibits mRNA binding (ortholog); protein kinase binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); cellular response to ethanol (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); Disease Progression (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955434 21744045 21745646 - 102018760 AGCD01032652;GBCC01000928;GBDF01006013;XM_013516306 XP_013371760 MODEL 8961332 protein-coding Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (ortholog); insulin receptor substrate binding (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); embryonic cleavage (ortholog); endothelial cell proliferation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FasL mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN brush border membrane (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955501 251829 381255 + 102015651 AGCD01064012;AGCD01064013;AGCD01064014;AGCD01064015;AGCD01064016;AGCD01064017;AGCD01064018;AGCD01064019;AGCD01064020;GBCQ01099651;XM_013505790 XP_013361244 MODEL 8798168 ncrna LOC102004751 uncharacterized LOC102004751 NW_004955437 17871916 17891241 + 102004751 AGCD01034762;GBCQ01090089;XR_001235033;XR_001235034;XR_001235035;XR_261887;XR_261889 MODEL 9026647 protein-coding Epb41l1 erythrocyte membrane protein band 4.1 like 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN regulation of exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 11 (ortholog); cervical cancer (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN parallel fiber to Purkinje cell synapse (ortholog); plasma membrane (ortholog); postsynapse (ortholog) NW_004955422 25338135 25456376 - 102028431 AGCD01023248;AGCD01023249;AGCD01023250;GBCE01186960;XM_005384755;XM_005384756;XM_005384758;XM_005384760;XM_013514214;XM_013514215;XM_013514216 XP_005384812;XP_005384813;XP_005384815;XP_005384817;XP_013369668;XP_013369669;XP_013369670 MODEL 8974312 protein-coding Spata13 spermatogenesis associated 13 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell migration (ortholog); filopodium assembly (ortholog); lamellipodium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); filopodium (ortholog) NW_004955497 4224374 4307335 - 102019928 AGCD01062569;AGCD01062570;AGCD01062571;AGCD01062572;GBBH01026662;GBDJ01239817;XM_013505480 XP_013360934 MODEL 8928141 protein-coding Rnpep arginyl aminopeptidase ENCODES a protein that exhibits aminopeptidase activity (ortholog); cobalt ion binding (ortholog); copper ion binding (ortholog); INVOLVED IN negative regulation of blood pressure (ortholog); protein processing (ortholog); retina development in camera-type eye (ortholog); PARTICIPATES IN angiotensin IV signaling pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Mammary Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955406 38103701 38122162 + 102021307 AGCD01006594;GBDI01071672;XM_005375200 XP_005375257 MODEL 8753248 protein-coding Thumpd1 THUMP domain 1 NAT10 acetyltransferase adaptor ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH SPEECH DELAY AND VARIABLE OCULAR ANOMALIES (ortholog) NW_004955493 32326 40283 - 102027865 AGCD01060835;GBCE01097709;XM_005405026 XP_005405083 MODEL 8741113 protein-coding LOC102019760 disintegrin and metalloproteinase domain-containing protein 20-like NW_004955403 32084751 32088414 - 102019760 AGCD01002429;GBDF01008556;XM_005373527 XP_005373584 MODEL 8710882 protein-coding Tpm1 tropomyosin 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN actin filament capping (ortholog); cardiac muscle contraction (ortholog); cellular response to reactive oxygen species (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH anemia (ortholog); atrial heart septal defect 1 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cytoskeleton (ortholog); bleb (ortholog); cytoplasm (ortholog) NW_004955450 12197241 12223372 - 102029136 AGCD01042694;AGCD01042695;GBDI01010272;XM_005393795;XM_005393797;XM_005393799;XM_005393800;XM_005393801;XM_013518944;XM_013518945 XP_005393852;XP_005393854;XP_005393856;XP_005393857;XP_005393858;XP_013374398;XP_013374399 MODEL 8775434 protein-coding Set SET nuclear proto-oncogene INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of neuron apoptotic process (ortholog); positive regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 58 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) NW_004955570 1104447 1117682 + 102025059 AGCD01074788;AGCD01074789;AGCD01074790;GBCC01015512;GBDF01047525;XM_013509410 XP_013364864 MODEL 8716548 protein-coding LOC102005449 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955460 10831510 10832892 + 102005449 AGCD01048617;XM_013521142 XP_013376596 MODEL 8868605 pseudo LOC102006168 40S ribosomal protein S2 pseudogene NW_004955442 9115157 9116092 + 102006168 AGCD01037662 MODEL 730469247 snorna SNORA28 Small nucleolar RNA SNORA28 9004574 pseudo LOC102009990 retinol dehydrogenase 11 pseudogene NW_004955438 7901724 7902409 - 102009990 AGCD01035148 MODEL 8740038 protein-coding Wac WW domain containing adaptor with coiled-coil ENCODES a protein that exhibits chromatin binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA damage response (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Adrenal Insufficiency (ortholog); anxiety disorder (ortholog); FOUND IN nucleoplasm (ortholog); spliceosomal complex (ortholog) NW_004955462 2358842 2435644 + 102015612 AGCD01049165;AGCD01049166;GBBH01064776;XM_005398110;XM_013521376;XM_013521377;XM_013521378;XM_013521379;XM_013521380 XP_005398167;XP_013376830;XP_013376831;XP_013376832;XP_013376833;XP_013376834 MODEL 8826894 protein-coding Pglyrp1 peptidoglycan recognition protein 1 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); molecular adaptor activity (ortholog); peptidoglycan binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); biological process involved in interaction with host (ortholog); defense response to Gram-positive bacterium (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Injuries (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955574 424046 427675 - 102024734 AGCD01075105;GBDK01185353;XM_005413825 XP_005413882 MODEL 39133321 snrna U4 U4 spliceosomal RNA 9064245 protein-coding Slc2a4rg SLC2A4 regulator ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955528 485653 488923 - 102004849 AGCD01069535;GBDJ01087928;GBDJ01087930;XM_005409944 XP_005410001 MODEL 10081628 ncrna LOC106150318 uncharacterized LOC106150318 NW_004955402 46337271 46342387 - 106150318 AGCD01001155;GBDJ01111390;XR_001237057 MODEL 10323061 pseudo LOC106147418 round spermatid basic protein 1-like protein NW_004955557 2266647 2271525 + 106147418 AGCD01073328;AGCD01073329 MODEL 8738120 protein-coding LOC102013195 ankyrin repeat domain-containing protein 26-like NW_004955429 20924084 20973447 - 102013195 AGCD01028992;AGCD01028993;GBDF01158703;GBDF01251273;XM_013515561;XR_001234544;XR_001234545 XP_013371015 MODEL 8977477 protein-coding LOC102007292 uncharacterized protein C15orf26-like NW_004956049 3925 6331 - 102007292 AGCD01078945;GBBH01031873;GBDJ01352435;XM_013510219 XP_013365673 MODEL 39132884 snrna U1 U1 spliceosomal RNA 39132875 snorna SNORA73 Small nucleolar RNA SNORA73 family 8799221 protein-coding Ppia peptidylprolyl isomerase A ENCODES a protein that exhibits cyclosporin A binding (ortholog); heparan sulfate binding (ortholog); integrin binding (ortholog); INVOLVED IN apoptotic process (ortholog); cell adhesion molecule production (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH aggressive periodontitis (ortholog); atopic dermatitis (ortholog); Bell's palsy (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nucleus (ortholog) NW_004955456 7381923 7383203 - 102016448 AGCD01046413;GBBH01002379;GBCQ01008235;XM_005396653 XP_005396710 MODEL 39131598 snorna SNORD42 Small nucleolar RNA SNORD42 9007979 ncrna LOC102019398 uncharacterized LOC102019398 NW_004955489 1974116 1979078 + 102019398 AGCD01059856;GBDF01111748;XR_264014;XR_264015 MODEL 8918265 protein-coding Prrc2a proline rich coiled-coil 2A ENCODES a protein that exhibits mRNA 5'-UTR binding (ortholog); mRNA CDS binding (ortholog); N6-methyladenosine-containing RNA reader activity (ortholog); INVOLVED IN mRNA stabilization (ortholog); positive regulation of cytoplasmic translation (ortholog); regulation of cytoplasmic translation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatoid body (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955437 161618 176225 + 102014284 AGCD01034107;AGCD01034108;GBDF01226148;XM_005389330;XR_261814 XP_005389387 MODEL 8713802 protein-coding Prdx1 peroxiredoxin 1 ENCODES a protein that exhibits heme binding (ortholog); identical protein binding (ortholog); peroxidase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); erythrocyte homeostasis (ortholog); hydrogen peroxide catabolic process (ortholog); ASSOCIATED WITH asbestosis (ortholog); cholangiocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); euchromatin (ortholog); mitochondrial matrix (ortholog) NW_004955464 12761390 12773413 + 102004364 AGCD01050224;AGCD01050225;AGCD01050226;AGCD01050227;AGCD01050228;GBCC01001560;GBCE01002844;XM_013521663 XP_013377117 MODEL 8886346 ncrna LOC102008474 uncharacterized LOC102008474 NW_004955446 117396 131699 - 102008474 AGCD01039928;AGCD01039929;XR_262359 MODEL 8888214 ncrna LOC102016250 uncharacterized LOC102016250 NW_004955466 8824099 8836048 + 102016250 AGCD01051001;GBDF01015997;XR_263298 MODEL 8845261 protein-coding LOC102022294 eukaryotic translation initiation factor 4B-like NW_004955483 1130768 1143285 - 102022294 AGCD01057644;GBDJ01001048;XM_005403314;XM_005403316;XM_013503771 XP_005403371;XP_005403373;XP_013359225 MODEL 8873850 protein-coding Rbm33 RNA binding motif protein 33 ENCODES a protein that exhibits lncRNA binding (ortholog); N6-methyladenosine-containing RNA reader activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN regulation of mRNA stability (ortholog); RNA export from nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955491 8534093 8633838 + 102018611 AGCD01060617;AGCD01060618;AGCD01060619;GBDF01052102;XM_005404864;XM_005404865;XM_005404866;XM_005404868;XM_013504634 XP_005404921;XP_005404922;XP_005404923;XP_005404925;XP_013360088 MODEL 8971667 ncrna LOC102010804 uncharacterized LOC102010804 NW_004955417 3968290 4005083 + 102010804 AGCD01017933;AGCD01017934;GBCB01092654;XR_001233425;XR_001233426;XR_001233427;XR_001233428;XR_001233429 MODEL 8817270 protein-coding LOC102008841 calcyclin-binding protein-like NW_004955414 6441386 6442088 - 102008841 AGCD01014919;XM_013512070 XP_013367524 MODEL 8716519 pseudo LOC102002984 60S ribosomal protein L8 pseudogene NW_004955403 16745732 16746501 + 102002984 AGCD01002067 MODEL 8781275 protein-coding Poc1a POC1 centriolar protein A INVOLVED IN bone development (ortholog); growth plate cartilage chondrocyte development (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH argininosuccinic aciduria (ortholog); astigmatism (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955532 3707680 3790565 - 102010197 AGCD01070295;AGCD01070296;AGCD01070297;AGCD01070298;GBBH01006023;GBDF01155240;XM_013507661;XM_013507662;XM_013507663;XM_013507664 XP_013363115;XP_013363116;XP_013363117;XP_013363118 MODEL 8844016 protein-coding Btbd9 BTB domain containing 9 INVOLVED IN adult locomotory behavior (ortholog); circadian behavior (ortholog); circadian sleep/wake cycle, non-REM sleep (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Prostate Cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog) NW_004955437 4765234 5145033 + 102015147 AGCD01034370;AGCD01034371;AGCD01034372;AGCD01034373;AGCD01034374;AGCD01034375;AGCD01034376;AGCD01034377;AGCD01034378;GBDF01043958;XM_005390124;XM_013516988 XP_005390181;XP_013372442 MODEL 8797314 protein-coding Epb41l2 erythrocyte membrane protein band 4.1 like 2 ENCODES a protein that exhibits PH domain binding (ortholog); spectrin binding (ortholog); INVOLVED IN positive regulation of protein localization to cell cortex (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell cortex (ortholog); cell junction (ortholog); COP9 signalosome (ortholog) NW_004955436 11650584 11805822 - 102030344 AGCD01033818;AGCD01033819;AGCD01033820;GBBH01093601;XM_013516681 XP_013372135 MODEL 8802022 pseudo LOC102005826 cyclin-dependent kinase 11B pseudogene NW_004955511 3584330 3587487 - 102005826 AGCD01066468 MODEL 8949215 protein-coding Rmi2 RecQ mediated genome instability 2 INVOLVED IN double-strand break repair via homologous recombination (ortholog); regulation of sister chromatid segregation (ortholog); resolution of DNA recombination intermediates (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nuclear speck (ortholog); RecQ family helicase-topoisomerase III complex (ortholog) NW_004955442 7262381 7266992 - 102029669 AGCD01037623;GBDJ01028580;XM_005391165 XP_005391222 MODEL 8722068 protein-coding Snrpn small nuclear ribonucleoprotein polypeptide N INVOLVED IN response to hormone (ortholog); ASSOCIATED WITH Angelman syndrome (ortholog); autistic disorder (ortholog); Prader-Willi syndrome (ortholog); FOUND IN U1 snRNP (ortholog); U2 snRNP (ortholog) NW_004955416 31668789 31674144 + 102023030 AGCD01017768;XM_013512673 XP_013368127 MODEL 8870419 ncrna LOC102011598 uncharacterized LOC102011598 NW_004955567 1211454 1212041 + 102011598 AGCD01074462;GBDF01038351;XR_265029 MODEL 730469198 snorna SNORA17 Small nucleolar RNA SNORA17 730469487 snorna SNORA48 Small nucleolar RNA SNORA48 8771540 protein-coding Rfx3 regulatory factor X3 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell maturation (ortholog); cilium assembly (ortholog); cilium-dependent cell motility (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955434 7635363 7910056 - 102019728 AGCD01032243;AGCD01032244;AGCD01032245;AGCD01032246;AGCD01032247;GBDF01254252;XM_005388617;XM_013516355;XM_013516356;XM_013516357;XM_013516358;XM_013516359;XM_013516360 XP_005388674;XP_013371809;XP_013371810;XP_013371811;XP_013371812;XP_013371813;XP_013371814 MODEL 8850973 protein-coding Raf1 Raf-1 proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits adenylate cyclase activator activity (ortholog); adenylate cyclase binding (ortholog); ATP binding (ortholog); INVOLVED IN cell differentiation (ortholog); death-inducing signaling complex assembly (ortholog); ERBB signaling pathway (ortholog); PARTICIPATES IN altered extracellular signal-regulated Raf/Mek/Erk signaling pathway; ceramide signaling pathway; endothelin signaling pathway; ASSOCIATED WITH Abdominal Pain (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955429 17980956 18049723 + 102019518 AGCD01028872;AGCD01028873;AGCD01028874;GBDF01086292;XM_005387107;XM_005387108;XM_005387109;XM_013515404;XM_013515405 XP_005387164;XP_005387165;XP_005387166;XP_013370858;XP_013370859 MODEL 8861288 ncrna LOC102004017 uncharacterized LOC102004017 NW_004955444 18696740 18734262 + 102004017 AGCD01039250;AGCD01039251;AGCD01039252;GBBH01146836;XR_001235489;XR_262282 MODEL 8902891 pseudo LOC102011168 telomeric repeat-binding factor 1 pseudogene NW_004957891 76 1145 - 102011168 AGCD01081287 MODEL 9014812 protein-coding Ptgdr2 prostaglandin D2 receptor 2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); prostaglandin binding (ortholog); prostaglandin D receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); chemotaxis (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); allergic asthma (ortholog) NW_004955511 5536602 5539944 - 102018518 AGCD01066567;AGCD01066568;GBDI01346045;XM_005408286 XP_005408343 MODEL 8986054 pseudo LOC102008093 calcium-binding protein 39 pseudogene NW_004955476 5340462 5341052 + 102008093 AGCD01055302 MODEL 8778085 protein-coding Sec14l5 SEC14 like lipid binding 5 ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog) NW_004955442 12527999 12567626 - 102028687 AGCD01037738;AGCD01037739;AGCD01037740;GBCB01075777;XM_005391257 XP_005391314 MODEL 8863825 protein-coding LOC102004761 eukaryotic translation initiation factor 1A, X-chromosomal-like NW_004955446 18926932 18928944 - 102004761 AGCD01040418;GBBH01096072;XM_013518447 XP_013373901 MODEL 8749548 protein-coding Spata16 spermatogenesis associated 16 INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); esophageal cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955420 2910780 3134177 - 102004712 AGCD01020609;AGCD01020610;AGCD01020611;AGCD01020612;AGCD01020613;GBDF01084320;XM_005383016 XP_005383073 MODEL 8893952 ncrna LOC102018193 uncharacterized LOC102018193 NW_004955492 8662680 8668236 + 102018193 AGCD01060823;GBCB01028339;XR_264060 MODEL 8939516 protein-coding Rnpepl1 arginyl aminopeptidase like 1 ENCODES a protein that exhibits initiator methionyl aminopeptidase activity (ortholog); metalloaminopeptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955542 897708 906011 - 102012582 AGCD01071483;GBCQ01007520;GBDJ01005066;XM_005411240 XP_005411297 MODEL 8954543 protein-coding Pld2 phospholipase D2 ENCODES a protein that exhibits D-type glycerophospholipase activity (ortholog); protein kinase C binding (ortholog); INVOLVED IN cellular response to phorbol 13-acetate 12-myristate (ortholog); G protein-coupled receptor internalization (ortholog); neuron projection development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; glycerophospholipid metabolic pathway; mTOR signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); cervical cancer (ortholog); FOUND IN brush border membrane (ortholog); caveola (ortholog); lamellipodium (ortholog) NW_004955467 10239177 10250516 + 102016147 AGCD01051558;GBBH01166668;XM_005399602;XM_013522221;XM_013522222 XP_005399659;XP_013377675;XP_013377676 MODEL 8907434 protein-coding Setbp1 SET binding protein 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); astigmatism (ortholog); FOUND IN nuclear body (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955402 30380346 30738869 + 102026697 AGCD01000770;AGCD01000771;AGCD01000772;AGCD01000773;AGCD01000774;AGCD01000775;AGCD01000776;AGCD01000777;AGCD01000778;GBCE01116826;XM_005373166 XP_005373223 MODEL 9062973 ncrna LOC102012008 uncharacterized LOC102012008 NW_004955506 888972 890923 + 102012008 AGCD01065239;GBDF01266491;XR_264312 MODEL 39131599 snorna SNORD42 Small nucleolar RNA SNORD42 8806820 protein-coding Rps6ka1 ribosomal protein S6 kinase A1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); kinase activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN hepatocyte proliferation (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of TOR signaling (ortholog); PARTICIPATES IN adenosine signaling pathway; fibroblast growth factor signaling pathway; mTOR signaling pathway; ASSOCIATED WITH alcohol-related birth defects (ortholog); cervical cancer (ortholog); fetal alcohol spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955452 5905561 5938096 + 102019017 AGCD01044068;AGCD01044069;GBCQ01128314;GBDK01089881;XM_013519669;XM_013519670 XP_013375123;XP_013375124 MODEL 8990815 ncrna LOC102009994 uncharacterized LOC102009994 NW_004955551 302834 319846 + 102009994 AGCD01072654;GBDF01089175;XR_264922 MODEL 9000697 protein-coding LOC102006174 lipopolysaccharide-binding protein-like NW_004955445 18292277 18311475 - 102006174 AGCD01039901;AGCD01039902;GBDK01402655;XM_005392587 XP_005392644 MODEL 8739352 protein-coding Wapl WAPL cohesin release factor ENCODES a protein that exhibits ATP-dependent protein-DNA unloader activity (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); chromatin looping (ortholog); homologous chromosome pairing at meiosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clubfoot (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955510 5596622 5674221 - 102007681 AGCD01066283;AGCD01066284;AGCD01066285;GBDI01171890;XM_005407895;XM_013506324 XP_005407952;XP_013361778 MODEL 8735606 protein-coding Pglyrp2 peptidoglycan recognition protein 2 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); N-acetylmuramoyl-L-alanine amidase activity (ortholog); peptidoglycan binding (ortholog); INVOLVED IN biological process involved in interaction with host (ortholog); defense response to Gram-positive bacterium (ortholog); detection of bacterium (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955495 7785398 7792158 + 102004616 AGCD01062164;GBDK01164575;XM_005406067 XP_005406124 MODEL 8776912 ncrna LOC102005450 uncharacterized LOC102005450 NW_004955409 37458586 37465397 - 102005450 AGCD01010520;GBDJ01346495;XR_001232672;XR_259810 MODEL 39133322 snrna U4 U4 spliceosomal RNA 9065175 pseudo LOC102016252 nucleosome assembly protein 1-like 1 NW_004955467 1693812 1695006 + 102016252 AGCD01051276 MODEL 9008923 protein-coding Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta INVOLVED IN B cell activation (ortholog); B cell homeostasis (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FasL mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); anxiety disorder (ortholog); FOUND IN cytosol (ortholog); phosphatidylinositol 3-kinase complex, class IA (ortholog) NW_004955486 3813923 3837563 - 102020126 AGCD01059038;AGCD01059039;GBBH01114424;XM_005404031;XM_013504160;XM_013504162;XM_013504163;XM_013504164 XP_005404088;XP_013359614;XP_013359616;XP_013359617;XP_013359618 MODEL 9043707 ncrna LOC102007293 uncharacterized LOC102007293 NW_004955404 27234470 27303032 - 102007293 AGCD01003918;AGCD01003919;AGCD01003920;AGCD01003921;AGCD01003922;GBDF01074909;XR_259322 MODEL 8952189 protein-coding LOC102013196 olfactory receptor 5AK2-like NW_004955511 2103315 2104244 + 102013196 AGCD01066391;XM_005407983 XP_005408040 MODEL 39132889 snrna U1 U1 spliceosomal RNA 39132880 snorna SNORA73 Small nucleolar RNA SNORA73 family 8953627 protein-coding Sptbn4 spectrin beta, non-erythrocytic 4 ENCODES a protein that exhibits actin binding (ortholog); ankyrin binding (ortholog); cytoskeletal adaptor activity (ortholog); INVOLVED IN adult behavior (ortholog); adult walking behavior (ortholog); axonogenesis (ortholog); ASSOCIATED WITH abnormal pupillary function (ortholog); absence epilepsy (ortholog); autistic disorder (ortholog); FOUND IN axon (ortholog); axon hillock (ortholog); axon initial segment (ortholog) NW_004955578 730916 813740 - 102010957 AGCD01075493;AGCD01075494;AGCD01075495;AGCD01075496;AGCD01075497;AGCD01075498;GBBH01158367;XM_013509644 XP_013365098 MODEL 8876766 protein-coding LOC102022296 cocaine esterase-like NW_004955484 9769745 9781227 - 102022296 AGCD01058429;AGCD01058430;GBDF01020524;XM_013503865 XP_013359319 MODEL 8723676 protein-coding Slc2a5 solute carrier family 2 member 5 ENCODES a protein that exhibits fructose binding (ortholog); fructose transmembrane transporter activity (ortholog); INVOLVED IN cellular response to fructose stimulus (ortholog); D-glucose transmembrane transport (ortholog); fructose import across plasma membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog); sarcolemma (ortholog) NW_004955486 4194568 4208568 + 102024804 AGCD01059057;GBDF01002394;XM_005404044;XM_013504322 XP_005404101;XP_013359776 MODEL 8837927 pseudo LOC102002985 nucleophosmin pseudogene NW_004955451 90063 90680 - 102002985 AGCD01042917 MODEL 730468987 snorna SNORA3 Small nucleolar RNA SNORA3/SNORA45 family 8824881 protein-coding Thumpd2 THUMP domain 2 tRNA and snRNA guanosine methyltransferase ENCODES a protein that exhibits U6 snRNA (guanine-N(2))-methyltransferase activity (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN methyltransferase complex (ortholog); nucleus (ortholog); tRNA methyltransferase complex (ortholog) NW_004955441 7329468 7369957 - 102016851 AGCD01036958;AGCD01036959;AGCD01036960;AGCD01036961;GBDJ01125332;XM_005390906;XM_005390907;XM_013517626;XM_013517627 XP_005390963;XP_005390964;XP_013373080;XP_013373081 MODEL 8708577 protein-coding Triqk triple QxxK/R motif containing ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955417 9397726 9450794 - 102017014 AGCD01018052;GBDK01025200;XM_005381781;XM_005381782;XM_005381783;XM_013512847;XM_013512848 XP_005381838;XP_005381839;XP_005381840;XP_013368301;XP_013368302 MODEL 10186638 ncrna LOC106150319 uncharacterized LOC106150319 NW_004955471 6220344 6222359 - 106150319 AGCD01053122;GBDI01190702;XR_001237054 MODEL 8772359 protein-coding LOC102019399 left-right determination factor 1-like NW_004955489 156460 160630 - 102019399 AGCD01059780;AGCD01059781;GBDJ01029000;GBDJ01388107;XM_013504465 XP_013359919 MODEL 8734927 pseudo LOC102008477 40S ribosomal protein S24 pseudogene NW_004955447 14840245 14840673 - 102008477 AGCD01041022 MODEL 8829073 protein-coding Prdx2 peroxiredoxin 2 ENCODES a protein that exhibits antioxidant activity (ortholog); thioredoxin peroxidase activity (ortholog); thioredoxin-dependent peroxiredoxin activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); defense response to tumor cell (ortholog); homeostasis of number of cells (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); asbestosis (ortholog); carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955415 31880801 31884453 - 102023027 AGCD01016700;GBCE01003406;XM_005381032 XP_005381089 MODEL 730469034 snorna SNORA48 Small nucleolar RNA SNORA48 8811239 ncrna LOC102010807 uncharacterized LOC102010807 NW_004955419 24809478 24811822 + 102010807 AGCD01020356;GBCE01047588;XR_001233558;XR_260656 MODEL 9027538 protein-coding Rbm34 RNA binding motif protein 34 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog) NW_004955492 4732249 4754433 + 102023609 AGCD01060728;AGCD01060729;GBBH01193549;GBDK01239466;XM_005405017 XP_005405074 MODEL 8983855 protein-coding LOC102008843 olfactory receptor 52N4-like NW_004955414 21721245 21722210 + 102008843 AGCD01015429;XM_005380501 XP_005380558 MODEL 8898501 protein-coding Prrc2b proline rich coiled-coil 2B ENCODES a protein that exhibits mRNA 5'-UTR binding (ortholog); mRNA binding (ortholog); mRNA CDS binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); mRNA stabilization (ortholog); positive regulation of translational initiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955513 1137099 1187724 + 102022524 AGCD01066845;GBDF01085170;XM_005408365;XM_005408368;XM_005408369;XM_005408370;XM_013506607;XM_013506608 XP_005408422;XP_005408425;XP_005408426;XP_005408427;XP_013362061;XP_013362062 MODEL 9019891 pseudo LOC102011172 translationally-controlled tumor protein pseudogene NW_004955405 31816779 31817304 - 102011172 AGCD01005306;XM_005374671 MODEL 8806811 protein-coding Ppib peptidylprolyl isomerase B ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); RNA polymerase binding (ortholog); INVOLVED IN bone development (ortholog); host-mediated activation of viral genome replication (ortholog); host-mediated activation of viral process (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog); melanosome (ortholog) NW_004955450 11241279 11246628 + 102019007 AGCD01042652;GBCE01002181;XM_005393760 XP_005393817 MODEL 8740841 pseudo LOC102005827 60S ribosomal protein L6-like NW_004955430 3987198 3988065 - 102005827 AGCD01029239;XR_261416 MODEL 8941422 protein-coding Snta1 syntrophin alpha 1 ENCODES a protein that exhibits ATPase binding (ortholog); dystroglycan binding (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN neuromuscular junction development (ortholog); regulation of heart rate (ortholog); regulation of sodium ion transmembrane transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Brugada syndrome (ortholog); dilated cardiomyopathy (ortholog); FOUND IN neuromuscular junction (ortholog); postsynaptic membrane (ortholog); protein-containing complex (ortholog) NW_004955422 27844699 27872104 + 102003779 AGCD01023337;AGCD01023338;AGCD01023339;GBBH01006232;GBDF01306217;XM_013514317 XP_013369771 MODEL 8905600 protein-coding Epb41l3 erythrocyte membrane protein band 4.1 like 3 INVOLVED IN axon development (ortholog); myelin maintenance (ortholog); neuron projection morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN axolemma (ortholog); cell junction (ortholog); cell-cell junction (ortholog) NW_004955402 5459586 5674745 + 102005981 AGCD01000136;AGCD01000137;GBDF01004195;XM_005372623;XM_005372625;XM_005372626;XM_005372627;XM_005372629;XM_005372630;XM_013516834;XM_013516878;XM_013516964;XM_013517037;XM_013517088;XM_013517123;XM_013517195;XM_013517228;XM_013517264;XM_013517295;XM_013517317;XM_013517351;XM_013517381;XM_013517413;XM_013517440 XP_005372680;XP_005372682;XP_005372683;XP_005372684;XP_005372686;XP_005372687;XP_013372288;XP_013372332;XP_013372418;XP_013372491;XP_013372542;XP_013372577;XP_013372649;XP_013372682;XP_013372718;XP_013372749;XP_013372771;XP_013372805;XP_013372835;XP_013372867;XP_013372894 MODEL 8809835 ncrna LOC102011599 uncharacterized LOC102011599 NW_004955448 16625313 16631092 + 102011599 AGCD01041700;GBDF01305679;XR_001235757;XR_262473 MODEL 8745693 protein-coding LOC102019761 tubulin gamma-1 chain NW_004955451 16487052 16494867 + 102019761 AGCD01043680;AGCD01043681;GBDJ01004622;XM_005394465 XP_005394522 MODEL 8877772 protein-coding Pglyrp4 peptidoglycan recognition protein 4 ENCODES a protein that exhibits peptidoglycan binding (ortholog); peptidoglycan immune receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); biological process involved in interaction with host (ortholog); defense response to Gram-positive bacterium (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955592 100022 111609 + 102006519 AGCD01076300;GBDI01104792;XM_005414604;XM_013509967;XM_013509968;XM_013509969;XM_013509970;XM_013509971;XM_013509972;XM_013509973;XM_013509974 XP_005414661;XP_013365421;XP_013365422;XP_013365423;XP_013365424;XP_013365425;XP_013365426;XP_013365427;XP_013365428 MODEL 8831336 protein-coding Tpm2 tropomyosin 2 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); identical protein binding (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); clubfoot (ortholog); Cognitive Dysfunction (ortholog); FOUND IN actin cytoskeleton (ortholog) NW_004955472 611079 617823 + 102010052 AGCD01053342;GBBH01001449;GBCB01010777;XM_013522938;XM_013522939;XM_013522941;XM_013522942 XP_013378392;XP_013378393;XP_013378395;XP_013378396 MODEL 730468982 snorna SNORA48 Small nucleolar RNA SNORA48 8872726 protein-coding LOC102004019 eppin NW_004955445 11687818 11693955 + 102004019 AGCD01039713;GBDF01009129;XM_005392422 XP_005392479 MODEL 8766177 pseudo LOC102004762 ADP-ribosylation factor-like protein 5A pseudogene NW_004955574 1088556 1089812 - 102004762 AGCD01075153 MODEL 9007708 protein-coding Spata17 spermatogenesis associated 17 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog) NW_004955406 599438 800369 - 102007504 AGCD01005621;AGCD01005622;GBDF01179516;XM_005374707;XM_005374709;XM_013519819 XP_005374764;XP_005374766;XP_013375273 MODEL 9063005 ncrna LOC102013197 uncharacterized LOC102013197 NW_004955430 2124248 2131815 - 102013197 AGCD01029152;AGCD01029153;GBCQ01086414;XR_261409 MODEL 8956107 protein-coding Rnps1 RNA binding protein with serine rich domain 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); positive regulation of apoptotic process (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN ASAP complex (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955442 14995404 15009358 + 102024287 AGCD01037853;AGCD01037854;GBDK01007927;XM_005391430;XM_005391431;XM_005391433 XP_005391487;XP_005391488;XP_005391490 MODEL 8828266 protein-coding Pld3 phospholipase D family member 3 ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); 5'-3' RNA exonuclease activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of toll-like receptor 9 signaling pathway (ortholog); positive regulation of intralumenal vesicle formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955578 884700 905426 - 102016536 AGCD01075500;GBCE01000031;XM_005414062;XM_005414063;XM_005414064;XM_005414066;XM_013509653;XM_013509654 XP_005414119;XP_005414120;XP_005414121;XP_005414123;XP_013365107;XP_013365108 MODEL 730469535 snorna SNORA17 Small nucleolar RNA SNORA17 8836659 protein-coding LOC102012009 ferritin-1 heavy chain-like NW_004955427 216126 219395 - 102012009 AGCD01026814;XM_005386602 XP_005386659 MODEL 730469092 snorna SNORD44 Small nucleolar RNA SNORD44 9059226 protein-coding Btc betacellulin ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN epidermal growth factor receptor signaling pathway (ortholog); ERBB2-EGFR signaling pathway (ortholog); ERBB4-ERBB4 signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); erythropoietic protoporphyria (ortholog); esophageal cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955474 895573 946152 - 102007545 AGCD01054231;AGCD01054232;GBCB01020646;XM_005401314 XP_005401371 MODEL 8749442 protein-coding Thumpd3 THUMP domain 3 tRNA guanosine methyltransferase ENCODES a protein that exhibits tRNA (guanine(6)-N2)-methyltransferase activity (ortholog); tRNA (guanine(7)-N2)-methyltransferase activity (ortholog); INVOLVED IN tRNA methylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955561 933168 956457 + 102028693 AGCD01073827;GBDI01041484;XM_005413004;XM_005413005 XP_005413061;XP_005413062 MODEL 8715218 protein-coding Rmnd1 required for meiotic nuclear division 1 homolog INVOLVED IN positive regulation of mitochondrial translation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrion (ortholog) NW_004955439 10151357 10193765 + 102029902 AGCD01035858;GBDF01252199;XM_005390579;XM_005390581 XP_005390636;XP_005390638 MODEL 8716108 pseudo LOC102008096 60S ribosomal protein L6-like NW_004955477 11186663 11187511 - 102008096 AGCD01055719 MODEL 10061789 protein-coding LOC106147419 vomeronasal type-1 receptor 4-like NW_004955558 322947 323945 + 106147419 AGCD01073364;XM_013508843 XP_013364297 MODEL 8828714 pseudo LOC102005452 protein kinase C iota type pseudogene NW_004955411 3980164 3982123 - 102005452 AGCD01011566 MODEL 8736669 protein-coding Ptgds prostaglandin D2 synthase ENCODES a protein that exhibits fatty acid binding (ortholog); prostaglandin-D synthase activity (ortholog); retinoid binding (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); gene expression (ortholog); negative regulation of male germ cell proliferation (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH arteriosclerosis (ortholog); Breast Cancer, Familial (ortholog); carotid artery disease (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog); rough endoplasmic reticulum (ortholog) NW_004955513 5009530 5012781 + 102028669 AGCD01066949;AGCD01066950;GBCQ01008032;XM_005408569 XP_005408626 MODEL 39133324 snrna U4 U4 spliceosomal RNA 8983318 protein-coding Rfx4 regulatory factor X4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cerebellar cortex morphogenesis (ortholog); cilium assembly (ortholog); dorsal spinal cord development (ortholog); FOUND IN nucleus (ortholog) NW_004955405 40483391 40648992 + 102022457 AGCD01005518;AGCD01005519;AGCD01005520;AGCD01005521;AGCD01005522;GBDF01004566;XM_005374622;XM_005374623;XM_005374624;XM_005374625 XP_005374679;XP_005374680;XP_005374681;XP_005374682 MODEL 8857490 protein-coding LOC102006178 UDP-glucuronosyltransferase 2B17-like NW_004955447 3671283 3776024 + 102006178 AGCD01040635;AGCD01040636;AGCD01040637;AGCD01040638;AGCD01040639;AGCD01040640;AGCD01040641;AGCD01040642;AGCD01040643;AGCD01040644;AGCD01040645;AGCD01040646;AGCD01040647;AGCD01040648;AGCD01040649;AGCD01040650;AGCD01040651;AGCD01040652;AGCD01040653;AGCD01040654;AGCD01040655;AGCD01040656;AGCD01040657;AGCD01040658;AGCD01040659;AGCD01040660;GBCQ01008307;XM_005392814;XM_005392815;XM_013518531;XM_013518532 XP_005392871;XP_005392872;XP_013373985;XP_013373986 MODEL 8737485 protein-coding Wars1 tryptophanyl-tRNA synthetase 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein homodimerization activity (ortholog); protein kinase binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); regulation of angiogenesis (ortholog); tryptophanyl-tRNA aminoacylation (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant distal hereditary motor neuronopathy 9 (ortholog); colorectal cancer (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955438 21414878 21445417 - 102006711 AGCD01035542;AGCD01035543;AGCD01035544;GBCE01053817;XM_005390433;XM_005390434;XM_005390436;XM_013517225 XP_005390490;XP_005390491;XP_005390493;XP_013372679 MODEL 8901273 protein-coding Sec16a SEC16 homolog A, endoplasmic reticulum export factor INVOLVED IN COPII vesicle coat assembly (ortholog); endocytic recycling (ortholog); endoplasmic reticulum organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog) NW_004955513 4272623 4304314 + 102005288 AGCD01066924;AGCD01066925;GBDK01008049;XM_005408487;XM_005408488;XM_013506686;XM_013506687;XM_013506688;XM_013506689;XM_013506690 XP_005408544;XP_005408545;XP_013362140;XP_013362141;XP_013362142;XP_013362143;XP_013362144 MODEL 9052001 protein-coding LOC102009995 CMRF35-like molecule 6 NW_004955553 1453306 1458327 + 102009995 AGCD01072882;GBDK01277584;XM_005412239 XP_005412296 MODEL 9019508 pseudo LOC102018199 cyclin-G1 pseudogene NW_004955425 7631390 7649613 + 102018199 AGCD01025391 MODEL 8920297 pseudo LOC102007294 serine/threonine/tyrosine-interacting protein pseudogene NW_004955453 2624180 2624993 + 102007294 AGCD01044634 MODEL 39132883 snorna SNORA73 Small nucleolar RNA SNORA73 family 8787900 protein-coding Poc1b POC1 centriolar protein B INVOLVED IN acrosome assembly (ortholog); cell morphogenesis (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH cone-rod dystrophy 20 (ortholog); oligoasthenoteratozoospermia (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955405 26720279 26786385 - 102014527 AGCD01005204;GBDF01005071;XM_005374437;XM_013518180 XP_005374494;XP_013373634 MODEL 8953020 protein-coding LOC102022297 arylacetamide deacetylase-like 4 NW_004955486 1253339 1293734 - 102022297 AGCD01058938;AGCD01058939;XM_005403944;XM_013504152 XP_005404001;XP_013359606 MODEL 9016002 ncrna LOC102005831 uncharacterized LOC102005831 NW_004955514 2457669 2462790 + 102005831 AGCD01067082;GBDF01145712;XR_264496 MODEL 8961014 protein-coding LOC102002991 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955406 23014463 23015572 + 102002991 AGCD01006162;XM_005375051 XP_005375108 MODEL 9052965 protein-coding Slc2a6 solute carrier family 2 member 6 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); regulation of glycolytic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955513 2796086 2802051 - 102017903 AGCD01066890;GBBH01198307;XM_005408447;XM_005408448 XP_005408504;XP_005408505 MODEL 730468992 snorna SNORA3 Small nucleolar RNA SNORA3/SNORA45 family 8958217 protein-coding Setd1a SET domain containing 1A, histone lysine methyltransferase ENCODES a protein that exhibits beta-catenin binding (ortholog); histone H3K4 methyltransferase activity (ortholog); histone H3K4 monomethyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); positive regulation of gene expression (ortholog); positive regulation of neural precursor cell proliferation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); blepharophimosis (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955493 7808652 7834886 + 102020131 AGCD01061227;AGCD01061228;AGCD01061229;GBCB01061270;XM_013504748 XP_013360202 MODEL 8783033 pseudo LOC102019402 kinesin-associated protein 3 pseudogene NW_004955492 2924415 2926457 + 102019402 AGCD01060683 MODEL 9014093 protein-coding Rps6ka2 ribosomal protein S6 kinase A2 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); protein serine/threonine/tyrosine kinase activity (ortholog); INVOLVED IN brain renin-angiotensin system (ortholog); cardiac muscle cell apoptotic process (ortholog); cellular response to carbohydrate stimulus (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); bipolar disorder (ortholog); FOUND IN cytoplasm (ortholog); meiotic spindle (ortholog); nucleoplasm (ortholog) NW_004955439 15210882 15487305 + 102025177 AGCD01036001;AGCD01036002;AGCD01036003;GBDK01073400;XM_005390650;XM_005390652;XM_013517373 XP_005390707;XP_005390709;XP_013372827 MODEL 8898706 protein-coding Tpm3 tropomyosin 3 ENCODES a protein that exhibits actin filament binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN brush border (ortholog); cleavage furrow (ortholog); cortical cytoskeleton (ortholog) NW_004955545 715860 746580 - 102027114 AGCD01071815;GBBH01031876;XM_005411467;XM_005411469;XM_005411470;XM_005411472;XM_005411473;XM_005411474;XM_005411475;XM_005411476;XM_005411478;XM_005411479;XM_005411481;XM_013508242;XM_013508243;XM_013508244;XM_013508245 XP_005411524;XP_005411526;XP_005411527;XP_005411529;XP_005411530;XP_005411531;XP_005411532;XP_005411533;XP_005411535;XP_005411536;XP_005411538;XP_013363696;XP_013363697;XP_013363698;XP_013363699 MODEL 8870362 protein-coding LOC102011176 keratin-associated protein 20-2-like NW_004955407 30259322 30259501 + 102011176 AGCD01007630;XM_005375653 XP_005375710 MODEL 8745727 protein-coding Trir telomerase RNA component interacting RNase ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 5'-3' exonuclease activity (ortholog); protein serine/threonine phosphatase inhibitor activity (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric (ortholog); rRNA catabolic process (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955415 31831093 31834796 - 102020242 AGCD01016698;GBDK01012972;XM_005381022 XP_005381079 MODEL 8840284 protein-coding Prrc2c proline rich coiled-coil 2C ENCODES a protein that exhibits translation regulator activity (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); regulation of cytoplasmic translation (ortholog); stress granule assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955406 12087072 12165266 + 102022880 AGCD01005906;AGCD01005907;AGCD01005908;AGCD01005909;GBBH01092333;GBDF01126038;XM_005374839;XM_013520642 XP_005374896;XP_013376096 MODEL 39132893 snrna U1 U1 spliceosomal RNA 8957824 ncrna LOC102004771 uncharacterized LOC102004771 NW_004955451 12688753 12693749 - 102004771 AGCD01043420;GBDI01181575;XR_001235990;XR_001235991;XR_262597 MODEL 8935355 protein-coding Spata18 spermatogenesis associated 18 ENCODES a protein that exhibits cardiolipin binding (ortholog); identical protein binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN mitochondrial protein catabolic process (ortholog); mitophagy by internal vacuole formation (ortholog); positive regulation of cardiolipin metabolic process (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) NW_004955447 18401881 18437878 - 102018448 AGCD01041172;GBBH01000264;GBDJ01139180;XM_013518527;XM_013518528 XP_013373981;XP_013373982 MODEL 8699697 pseudo LOC102010809 protein FAM161A pseudogene NW_004955419 28597487 28599260 - 102010809 AGCD01020469 MODEL 8912590 protein-coding Sptbn5 spectrin beta, non-erythrocytic 5 ENCODES a protein that exhibits actin filament binding (ortholog); dynactin binding (ortholog); dynein intermediate chain binding (ortholog); INVOLVED IN Golgi organization (ortholog); lysosomal transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical cortex (ortholog); cortical cytoskeleton (ortholog); cytoplasm (ortholog) NW_004955416 8643177 8684469 - 102006454 AGCD01017064;AGCD01017065;GBBH01205829;XM_013512416 XP_013367870 MODEL 8781360 ncrna LOC102011604 uncharacterized LOC102011604 NW_004955592 442424 444289 + 102011604 AGCD01076315;GBDF01289807;XR_265137 MODEL 8956805 protein-coding Sntb1 syntrophin beta 1 ENCODES a protein that exhibits PDZ domain binding (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN protein-containing complex (ortholog); synapse (ortholog) NW_004955417 25906013 26128134 - 102019501 AGCD01018495;AGCD01018496;AGCD01018497;AGCD01018498;GBDI01120696;XM_013512818 XP_013368272 MODEL 8974799 protein-coding Rmnd5a required for meiotic nuclear division 5 homolog A ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955424 983275 1034160 - 102015736 AGCD01024227;GBDI01072370;XM_005385391 XP_005385448 MODEL 8749579 protein-coding Prdx3 peroxiredoxin 3 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); cellular response to reactive oxygen species (ortholog); hydrogen peroxide catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive spinocerebellar ataxia 32 (ortholog); CORNEAL DYSTROPHY, PUNCTIFORM AND POLYCHROMATIC PRE-DESCEMET (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955431 23640775 23651738 - 102006940 AGCD01030547;GBDK01092760;XM_005387887 XP_005387944 MODEL 8967392 protein-coding LOC102008482 hornerin NW_004955589 190459 199095 + 102008482 AGCD01076158;AGCD01076159;GBCC01001512;XM_005414528;XM_005414529;XM_005414531;XM_013509953;XM_013509954 XP_005414585;XP_005414586;XP_005414588;XP_013365407;XP_013365408 MODEL 9049273 pseudo LOC102016253 E3 ubiquitin-protein ligase makorin-1 pseudogene NW_004955412 15316407 15318427 - 102016253 AGCD01012870 MODEL 8848780 protein-coding Pgm1 phosphoglucomutase 1 ENCODES a protein that exhibits magnesium ion binding (ortholog); phosphoglucomutase activity (ortholog); INVOLVED IN beta-D-galactose catabolic process via UDP-galactose, Leloir pathway (ortholog); cellular response to magnetism (ortholog); glucose metabolic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; fructose-1,6-bisphosphatase deficiency pathway; galactokinase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytosol (ortholog); Z disc (ortholog) NW_004955423 26408775 26437527 - 102003887 AGCD01024096;GBBH01178702;XM_005385325 XP_005385382 MODEL 9063563 protein-coding Rag1 recombination activating 1 ENCODES a protein that exhibits endonuclease activity (ortholog); histone binding (ortholog); identical protein binding (ortholog); INVOLVED IN adaptive immune response (ortholog); B cell differentiation (ortholog); negative regulation of T cell apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenosine deaminase deficiency (ortholog); Albuminuria (ortholog); FOUND IN nucleus (ortholog) NW_004955422 9891878 9928569 - 102004611 AGCD01022724;AGCD01022725;AGCD01022726;GBDF01299674;JN414958;KF590658;XM_005384104;XM_013514280 AEP18785;AGW05221;XP_005384161;XP_013369734 MODEL 9059092 protein-coding Rbm38 RNA binding motif protein 38 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955445 2036314 2050882 - 102004430 AGCD01039348;GBBH01032146;GBDF01047365;XM_005392253 XP_005392310 MODEL 8711921 protein-coding LOC102008850 centromere protein Q-like NW_004955481 3368425 3369339 + 102008850 AGCD01056902;XM_013503357 XP_013358811 MODEL 730469058 snorna SNORA48 Small nucleolar RNA SNORA48 8773654 protein-coding Ppic peptidylprolyl isomerase C ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ASSOCIATED WITH Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) NW_004955521 1138779 1143345 - 102021698 AGCD01068173;AGCD01068174;GBCQ01070591;GBCQ01098286;XM_013507085 XP_013362539 MODEL 8906378 pseudo LOC102009996 cytochrome P450 2B4-like NW_004955555 49910 64514 - 102009996 AGCD01073023 MODEL 8843895 protein-coding LOC102013198 olfactory receptor 1052-like NW_004955511 1015613 1016557 + 102013198 AGCD01066353;XM_005408221 XP_005408278 MODEL 9003980 protein-coding Epb41l4a erythrocyte membrane protein band 4.1 like 4A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955418 2876345 3097365 + 102013606 AGCD01018777;AGCD01018778;AGCD01018779;GBCQ01099747;GBDF01195481;XM_005382155;XM_005382156;XM_005382157;XM_013513019 XP_005382212;XP_005382213;XP_005382214;XP_013368473 MODEL 730469382 snorna SNORA17 Small nucleolar RNA SNORA17 9005084 pseudo LOC102022299 protein odr-4 homolog NW_004955488 3218892 3220365 - 102022299 AGCD01059571 MODEL 8775706 ncrna LOC102012010 uncharacterized LOC102012010 NW_004955506 6455233 6469865 - 102012010 AGCD01065423;AGCD01065424;AGCD01065425;AGCD01065426;GBDF01119360;XR_264363 MODEL 39132149 snorna SNORD45 Small nucleolar RNA SNORD45 8705695 pseudo LOC102004023 guanine deaminase-like NW_004955402 41170178 41171764 - 102004023 AGCD01001012 MODEL 8875025 protein-coding Btd biotinidase ENCODES a protein that exhibits biotinidase activity (ortholog); INVOLVED IN biotin metabolic process (ortholog); PARTICIPATES IN biotin metabolic pathway; biotinidase deficiency pathway; holocarboxylase synthetase deficiency pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); biotin deficiency (ortholog); FOUND IN apical part of cell (ortholog); extracellular region (ortholog); nucleolus (ortholog) NW_004955430 7960036 7988754 + 102022111 AGCD01029378;GBDF01001926;XM_005387438;XM_005387439;XM_005387440;XM_005387441;XM_005387442;XM_005387443;XM_013515701;XM_013515702 XP_005387495;XP_005387496;XP_005387497;XP_005387498;XP_005387499;XP_005387500;XP_013371155;XP_013371156 MODEL 8948879 protein-coding LOC102019762 zinc finger protein 596-like NW_004955403 53350577 53361660 + 102019762 AGCD01003053;XM_013514941 XP_013370395 MODEL 8998774 protein-coding Thy1 Thy-1 cell surface antigen ENCODES a protein that exhibits enzyme binding (ortholog); GPI anchor binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell adhesion (ortholog); cell-cell signaling (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Reperfusion Injury (ortholog); FOUND IN apical plasma membrane (ortholog); axolemma (ortholog); cell surface (ortholog) NW_004955412 20480284 20484958 - 102008928 AGCD01013009;GBDI01065511;XM_005378342 XP_005378399 MODEL 8780945 protein-coding Ro60 Ro60, Y RNA binding protein ENCODES a protein that exhibits RNA binding (ortholog); U2 snRNA binding (ortholog); INVOLVED IN cellular response to interferon-alpha (ortholog); cilium assembly (ortholog); immune system development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955406 30468775 30491206 + 102019467 AGCD01006368;AGCD01006369;GBDF01042658;XM_005375102 XP_005375159 MODEL 39133325 snrna U4 U4 spliceosomal RNA 8769812 protein-coding Ptger1 prostaglandin E receptor 1 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); maternal process involved in parturition (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); allergic asthma (ortholog); Animal Mammary Neoplasms (ortholog) NW_004955415 33063052 33067580 - 102016702 AGCD01016748;GBDJ01401845;XM_005381104 XP_005381161 MODEL 9028731 pseudo LOC102006179 histidine triad nucleotide-binding protein 1 pseudogene NW_004955575 1174358 1174782 + 102006179 AGCD01075234 MODEL 8895123 protein-coding Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (ortholog); 1-phosphatidylinositol-4-phosphate 3-kinase activity (ortholog); INVOLVED IN behavioral response to pain (ortholog); cellular response to cAMP (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; insulin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955410 11402476 11433335 + 102028939 AGCD01010824;GBDK01327812;XM_005377268;XM_005377269;XM_005377270;XM_013510652;XM_013510653 XP_005377325;XP_005377326;XP_005377327;XP_013366106;XP_013366107 MODEL 9031877 pseudo LOC102018200 60S ribosomal protein L9-like NW_004955501 4266517 4318674 - 102018200 AGCD01064120;AGCD01064121;AGCD01064122;AGCD01064123;AGCD01064124 MODEL 8967317 pseudo LOC102007297 stromal membrane-associated protein 1 pseudogene NW_004955454 15354912 15356393 + 102007297 AGCD01045493 MODEL 39132828 snorna SNORA73 Small nucleolar RNA SNORA73 family 9060619 pseudo LOC102004774 protein FRG1 pseudogene NW_004955452 2196007 2237809 - 102004774 AGCD01043881;AGCD01043882;AGCD01043883;AGCD01043884 MODEL 8775674 protein-coding LOC102008105 translation initiation factor IF-2-like NW_004955481 3628568 3637628 - 102008105 AGCD01056909;GBDI01140316;XM_005402923 XP_005402980 MODEL 8767652 ncrna LOC102005832 uncharacterized LOC102005832 NW_004955432 9508053 9514240 + 102005832 AGCD01030907;GBDF01055577;XR_261519 MODEL 626189201 snorna SNORA3 Small nucleolar RNA SNORA3/SNORA45 family 8828688 protein-coding Slc2a8 solute carrier family 2 member 8 ENCODES a protein that exhibits D-glucose binding (ortholog); D-glucose transmembrane transporter activity (ortholog); dehydroascorbic acid transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); dehydroascorbic acid transport (ortholog); fructose transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); plasma membrane (ortholog); synaptic vesicle (ortholog) NW_004955419 1177752 1187157 - 102003967 AGCD01019644;GBDI01010591;XM_005382427;XM_005382428;XM_005382429 XP_005382484;XP_005382485;XP_005382486 MODEL 8756732 protein-coding LOC102005453 olfactory receptor 8D1-like NW_004955412 25120340 25121215 - 102005453 AGCD01013135;XM_013511250 XP_013366704 MODEL 8721309 ncrna LOC102019406 uncharacterized LOC102019406 NW_004955422 17689447 17710741 - 102019406 AGCD01022932;GBDF01207243;XR_001233931;XR_001233932 MODEL 8753328 protein-coding Setd1b SET domain containing 1B, histone lysine methyltransferase ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); histone H3K4 monomethyltransferase activity (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); histone methyltransferase complex (ortholog) NW_004955482 6598176 6621944 - 102003135 AGCD01057403;AGCD01057404;AGCD01057405;AGCD01057406;GBCB01131998;GBDK01358092;XM_013503539 XP_013358993 MODEL 8740288 protein-coding Rfx5 regulatory factor X5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of MHC class II biosynthetic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955588 687086 695696 - 102004022 AGCD01076118;GBCQ01031430;XM_005414519;XM_005414520;XM_005414522;XM_005414523;XM_013509923;XM_013509924;XM_013509925 XP_005414576;XP_005414577;XP_005414579;XP_005414580;XP_013365377;XP_013365378;XP_013365379 MODEL 9009436 protein-coding Rps6ka3 ribosomal protein S6 kinase A3 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); response to lipopolysaccharide (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955509 600415 701833 - 102007141 AGCD01065937;AGCD01065938;GBDK01197328;XM_005407812;XM_005407814;XM_005407817 XP_005407869;XP_005407871;XP_005407874 MODEL 8737531 protein-coding LOC102008486 vomeronasal type-1 receptor 4-like NW_004955603 3670 4617 + 102008486 AGCD01076801;XM_005414840 XP_005414897 MODEL 9053487 protein-coding Wars2 tryptophanyl tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits tryptophan-tRNA ligase activity (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); vasculogenesis (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955435 22032230 22115138 - 102014082 AGCD01033489;AGCD01033490;AGCD01033491;GBCB01110388;XM_005389073;XM_005389075 XP_005389130;XP_005389132 MODEL 8998006 ncrna LOC102011177 uncharacterized LOC102011177 NW_004955408 10359375 10380970 - 102011177 AGCD01008267;AGCD01008268;GBDF01237961;XR_259677 MODEL 8771992 protein-coding Tpm4 tropomyosin 4 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN platelet formation (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); asbestosis (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); cortical cytoskeleton (ortholog); cytoplasm (ortholog) NW_004955524 1419061 1432114 - 102022847 AGCD01068749;GBCC01000148;GBCQ01010124;XM_013507272 XP_013362726 MODEL 8958354 protein-coding Trit1 tRNA isopentenyltransferase 1 ENCODES a protein that exhibits tRNA dimethylallyltransferase activity (ortholog); INVOLVED IN mitochondrial tRNA modification (ortholog); tRNA modification (ortholog); ASSOCIATED WITH capillary hemangioma (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955452 17330446 17378579 - 102029821 AGCD01044550;AGCD01044551;AGCD01044552;GBDK01277036;XM_005395267;XM_005395268;XM_013519693 XP_005395324;XP_005395325;XP_013375147 MODEL 39132897 snrna U1 U1 spliceosomal RNA 9013315 protein-coding Prrg1 proline rich and Gla domain 1 ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955587 289906 388534 - 102010848 AGCD01076063;AGCD01076064;GBDK01324063;XM_005414447;XM_013509903 XP_005414504;XP_013365357 MODEL 9067068 protein-coding Ppid peptidylprolyl isomerase D ENCODES a protein that exhibits cyclosporin A binding (ortholog); enzyme binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN cellular response to UV-A (ortholog); lipid droplet organization (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955471 12309224 12323198 - 102018917 AGCD01053285;AGCD01053286;GBDI01137437;XM_005400965 XP_005401022 MODEL 8884224 protein-coding Poc5 POC5 centriolar protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN centriole elongation (ortholog); negative regulation of centriole elongation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) NW_004955425 25055259 25092101 + 102022720 AGCD01025908;AGCD01025909;GBCB01111720;GBDF01187988;XM_013514890;XM_013514891;XM_013514892 XP_013370344;XP_013370345;XP_013370346 MODEL 9061988 ncrna LOC102002993 uncharacterized LOC102002993 NW_004955407 12761327 12805870 - 102002993 AGCD01007138;AGCD01007139;GBDF01086288;XR_001230993 MODEL 8887094 protein-coding LOC102011607 3-beta-hydroxysteroid sulfotransferase-like NW_004955609 280400 319841 - 102011607 AGCD01077056;AGCD01077057;GBCB01061931;XM_005414930 XP_005414987 MODEL 8823325 protein-coding Prdx4 peroxiredoxin 4 ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); molecular sequestering activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); extracellular matrix organization (ortholog); male gonad development (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955509 4111501 4132529 + 102013957 AGCD01066053;GBDF01050840;XM_005407830;XM_005407832;XM_013506292 XP_005407887;XP_005407889;XP_013361746 MODEL 8911290 protein-coding Rmnd5b required for meiotic nuclear division 5 homolog B ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog) NW_004955408 2095150 2107394 - 102012160 AGCD01007991;GBCQ01095814;XM_005376040;XM_013508101 XP_005376097;XP_013363555 MODEL 9008735 protein-coding Pgm2 phosphoglucomutase 2 ENCODES a protein that exhibits phosphoglucomutase activity (ortholog); phosphopentomutase activity (ortholog); INVOLVED IN glucose metabolic process (ortholog); glycogen biosynthetic process (ortholog); glycogen catabolic process (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955443 9302011 9329631 - 102009429 AGCD01038347;AGCD01038348;GBCB01058679;GBDI01133806;XM_013518108;XM_013518109 XP_013373562;XP_013373563 MODEL 8771683 protein-coding Rbm39 RNA binding motif protein 39 ENCODES a protein that exhibits RS domain binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN regulation of mRNA splicing, via spliceosome (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); protein-containing complex (ortholog) NW_004955422 25719771 25755757 + 102005389 AGCD01023264;AGCD01023265;AGCD01023266;GBBH01034224;XM_005384769;XM_005384770;XM_005384771;XM_005384772 XP_005384826;XP_005384827;XP_005384828;XP_005384829 MODEL 8936891 protein-coding LOC102006182 arylacetamide deacetylase-like NW_004955448 3031084 3044420 + 102006182 AGCD01041300;AGCD01041301;GBBH01008796;XM_005393036 XP_005393093 MODEL 730469500 snorna SNORA48 Small nucleolar RNA SNORA48 10123570 protein-coding LOC106147420 vomeronasal type-1 receptor 4-like NW_004955558 500333 501256 - 106147420 AGCD01073374;XM_013508844 XP_013364298 MODEL 8756803 protein-coding LOC102010001 seminal vesicle protein SVP-2-like NW_004955445 12108842 12114494 - 102010001 AGCD01039738;GBDK01186241;XM_005392441 XP_005392498 MODEL 8910796 protein-coding Sec16b SEC16 homolog B, endoplasmic reticulum export factor INVOLVED IN endoplasmic reticulum organization (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ER-dependent peroxisome organization (ortholog); ASSOCIATED WITH Body Weight (ortholog); FOUND IN endoplasmic reticulum exit site (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955406 17458699 17509379 - 102022162 AGCD01006011;GBDK01263428;XM_013520997;XM_013521001;XM_013521007;XM_013521010;XM_013521012;XM_013521014 XP_013376451;XP_013376455;XP_013376461;XP_013376464;XP_013376466;XP_013376468 MODEL 39132829 snorna SNORA73 Small nucleolar RNA SNORA73 family 8796026 ncrna LOC102004776 uncharacterized LOC102004776 NW_004955405 37643987 37648127 + 102004776 AGCD01005457;GBDJ01389922;XR_259437 MODEL 730469420 snorna SNORA17 Small nucleolar RNA SNORA17 8855913 ncrna LOC102005833 uncharacterized LOC102005833 NW_004955516 4052159 4191251 + 102005833 AGCD01067516;AGCD01067517;AGCD01067518;AGCD01067519;GBBH01058464;XR_264537 MODEL 8931849 protein-coding Sntb2 syntrophin beta 2 PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); Mesothelioma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955484 7391076 7489357 - 102005809 AGCD01058330;AGCD01058331;AGCD01058332;AGCD01058333;GBBH01076692;XM_013503934 XP_013359388 MODEL 8857374 protein-coding LOC102002994 keratin-associated protein 13-1-like NW_004955407 29780142 29780702 - 102002994 AGCD01007614;XM_005375629 XP_005375686 MODEL 730469076 snorna SNORD45 Small nucleolar RNA SNORD45 8925516 protein-coding Sptlc1 serine palmitoyltransferase long chain base subunit 1 ENCODES a protein that exhibits serine C-palmitoyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); glycosphingolipid biosynthetic process (ortholog); positive regulation of lipophagy (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955515 57711 161012 + 102011471 AGCD01067181;AGCD01067182;AGCD01067183;AGCD01067184;GBDF01192203;XM_005408864 XP_005408921 MODEL 8711858 pseudo LOC102004024 KATNB1-like protein 1 NW_004955402 52891404 52893054 - 102004024 AGCD01001350 MODEL 730469222 snorna SNORA3 Small nucleolar RNA SNORA3/SNORA45 family 9017251 pseudo LOC102019765 zinc finger protein Aiolos pseudogene NW_004955404 14412796 14424219 + 102019765 AGCD01003509 MODEL 8846200 protein-coding Thyn1 thymocyte nuclear protein 1 ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955412 35061874 35067631 - 102003426 AGCD01013397;GBDJ01191132;XM_005378596;XM_013511064;XM_013511065;XM_013511066;XM_013511067 XP_005378653;XP_013366518;XP_013366519;XP_013366520;XP_013366521 MODEL 8717689 protein-coding Pld4 phospholipase D family member 4 ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); 5'-3' RNA exonuclease activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); innate immune response (ortholog); phagocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955538 3296581 3303187 + 102029444 AGCD01071157;GBDJ01237040;XM_005410848 XP_005410905 MODEL 39133326 snrna U4 U4 spliceosomal RNA 8891058 protein-coding Spata19 spermatogenesis associated 19 INVOLVED IN sperm mitochondrion organization (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); sperm flagellum (ortholog) NW_004955412 34684298 34689163 - 102027159 AGCD01013391;GBDF01007327;XM_005378581;XM_005378582;XM_013510989;XM_013510990 XP_005378638;XP_005378639;XP_013366443;XP_013366444 MODEL 8778209 protein-coding LOC102008851 solute carrier family 7 member 13-like NW_004955417 3044836 3065300 + 102008851 AGCD01017903;XM_013512697 XP_013368151 MODEL 10236592 ncrna LOC106150320 uncharacterized LOC106150320 NW_004955471 7628393 7631354 - 106150320 AGCD01053157;GBDF01249699;XR_001237055 MODEL 8928291 protein-coding Robo1 roundabout guidance receptor 1 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); identical protein binding (ortholog); LRR domain binding (ortholog); INVOLVED IN aorta development (ortholog); aortic valve morphogenesis (ortholog); axon guidance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); atrial fibrillation (ortholog); FOUND IN axolemma (ortholog); axon (ortholog); cell surface (ortholog) NW_004955407 12593911 13485723 + 102029046 AGCD01007135;AGCD01007136;AGCD01007137;AGCD01007138;AGCD01007139;AGCD01007140;AGCD01007141;AGCD01007142;AGCD01007143;AGCD01007144;AGCD01007145;AGCD01007146;AGCD01007147;AGCD01007148;AGCD01007149;AGCD01007150;GBCE01179506;XM_013503701;XM_013503704;XM_013503707;XM_013503711;XM_013503716 XP_013359155;XP_013359158;XP_013359161;XP_013359165;XP_013359170 MODEL 8794080 ncrna LOC102012013 uncharacterized LOC102012013 NW_004955431 310644 317292 - 102012013 AGCD01029865;GBDK01414667;XR_261437 MODEL 8868081 protein-coding Tpmt thiopurine S-methyltransferase ENCODES a protein that exhibits S-adenosyl-L-methionine binding (ortholog); thiopurine S-methyltransferase activity (ortholog); INVOLVED IN response to testosterone (ortholog); xenobiotic metabolic process (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia (ortholog); autism spectrum disorder (ortholog); FOUND IN cytosol (ortholog) NW_004955483 8052867 8072235 + 102019173 AGCD01057824;GBDK01177579;XM_005403393;XM_013503824;XM_013503825;XM_013503826 XP_005403450;XP_013359278;XP_013359279;XP_013359280 MODEL 8734881 protein-coding Pik3ip1 phosphoinositide-3-kinase interacting protein 1 ENCODES a protein that exhibits phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); diastolic heart failure (ortholog) NW_004955455 5474569 5488420 - 102006211 AGCD01045727;AGCD01045728;AGCD01045729;GBBH01142408;GBDJ01181146;XM_013520330 XP_013375784 MODEL 9014572 protein-coding Rag2 recombination activating 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K4me3 reader activity (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell homeostatic proliferation (ortholog); B cell lineage commitment (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH combined cellular and humoral immune defects with granulomas (ortholog); common variable immunodeficiency (ortholog); Eosinophilia (ortholog) NW_004955422 9867307 9869732 + 102003558 AGCD01022723;AY303201;GBDF01207383;XM_005384100 AAQ76995;XP_005384157 MODEL 8839513 ncrna LOC102013200 uncharacterized LOC102013200 NW_004955431 18996533 19001698 + 102013200 AGCD01030438;GBDF01083957;XR_001234628;XR_261489 MODEL 8720070 pseudo LOC102016255 S-phase kinase-associated protein 1 pseudogene NW_004955413 32899725 32900339 - 102016255 AGCD01014649;XM_005379524 MODEL 8844557 protein-coding Epb41l4b erythrocyte membrane protein band 4.1 like 4B INVOLVED IN actomyosin structure organization (ortholog); positive regulation of cell adhesion (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog) NW_004955419 17686096 17821884 + 102003658 AGCD01020161;AGCD01020162;AGCD01020163;AGCD01020164;GBCE01117906;GBCE01117907;XM_013513219;XM_013513220 XP_013368673;XP_013368674 MODEL 8700349 ncrna LOC102008106 uncharacterized LOC102008106 NW_004955482 4507858 4511301 + 102008106 AGCD01057294;GBDF01156183;XR_001230999 MODEL 8743226 ncrna LOC102022300 uncharacterized LOC102022300 NW_004955421 10315563 10318178 + 102022300 AGCD01021873;GBCQ01059920;XR_260792 MODEL 8982443 ncrna LOC102011610 uncharacterized LOC102011610 NW_004955451 5820260 5823021 - 102011610 AGCD01043179;GBDJ01389060;XR_001236001;XR_001236002 MODEL 8935401 protein-coding LOC102019408 olfactory receptor 7G2-like NW_004955495 141820 142770 - 102019408 AGCD01061603;XM_005406113 XP_005406170 MODEL 9061970 protein-coding Slc2a9 solute carrier family 2 member 9 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); fructose transmembrane transporter activity (ortholog); urate transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); fructose transmembrane transport (ortholog); urate metabolic process (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); nuclear envelope (ortholog) NW_004955514 5479585 5625328 - 102029652 AGCD01067155;AGCD01067156;AGCD01067157;GBDI01170943;XM_005408843 XP_005408900 MODEL 8745488 protein-coding Rfx6 regulatory factor X6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN endocrine pancreas development (ortholog); glucose homeostasis (ortholog); pancreatic A cell differentiation (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); epilepsy (ortholog); familial hyperlipidemia (ortholog); FOUND IN nucleus (ortholog) NW_004955436 213810 278699 + 102007270 AGCD01033537;AGCD01033538;AGCD01033539;GBDF01078446;XM_005389119 XP_005389176 MODEL 8912562 protein-coding Setd2 SET domain containing 2, histone lysine methyltransferase ENCODES a protein that exhibits alpha-tubulin binding (ortholog); histone H3K36 methyltransferase activity (ortholog); histone H3K36 trimethyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell migration involved in vasculogenesis (ortholog); coronary vasculature morphogenesis (ortholog); PARTICIPATES IN histone modification pathway; renal cell carcinoma pathway; ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog) NW_004955420 25070626 25178410 + 102005942 AGCD01021344;AGCD01021345;AGCD01021346;GBDF01080632;GBDF01080633;XM_013513427 XP_013368881 MODEL 8717181 protein-coding LOC102008487 actin cytoskeleton-regulatory complex protein pan1-like NW_004955451 2446558 2456251 - 102008487 AGCD01043009;GBBH01184630;XM_013519305 XP_013374759 MODEL 8726146 protein-coding Prdx5 peroxiredoxin 5 ENCODES a protein that exhibits antioxidant activity (ortholog); cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); hydrogen peroxide catabolic process (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia areata (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955422 20763822 20766976 - 102010595 AGCD01023086;GBCB01004546;XM_005384597 XP_005384654 MODEL 8942984 ncrna LOC102011178 uncharacterized LOC102011178 NW_004955457 13088413 13091964 + 102011178 AGCD01047037;GBBH01088650;XR_262949 MODEL 8786173 protein-coding Btf3 basic transcription factor 3 INVOLVED IN in utero embryonic development (ortholog); negative regulation of protein localization to endoplasmic reticulum (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nascent polypeptide-associated complex (ortholog) NW_004955425 27099207 27105644 - 102007789 AGCD01025960;GBDF01008196;XM_005386072;XM_005386073 XP_005386129;XP_005386130 MODEL 8774516 ncrna LOC102010003 uncharacterized LOC102010003 NW_004955447 16623757 16625250 + 102010003 AGCD01041095;GBDF01280990;XR_262438 MODEL 9059477 protein-coding Trmo tRNA methyltransferase O ENCODES a protein that exhibits tRNA (L-threonylcarbamoyladenosine(37)-C2) methyltransferase activity (ortholog); INVOLVED IN tRNA methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955419 27553040 27568417 + 102020012 AGCD01020441;GBCQ01059248;XM_013513222;XM_013513223 XP_013368676;XP_013368677 MODEL 8846431 protein-coding LOC102010812 zinc finger protein 35 NW_004955420 26847358 26895078 - 102010812 AGCD01021434;AGCD01021435;GBCB01086637;XM_013513410;XM_013513411;XM_013513412;XM_013513413;XM_013513414;XM_013513415 XP_013368864;XP_013368865;XP_013368866;XP_013368867;XP_013368868;XP_013368869 MODEL 8782764 protein-coding LOC102007299 keratin-associated protein 20-2-like NW_004955407 30163388 30163546 + 102007299 AGCD01007628;XM_005375641 XP_005375698 MODEL 39132900 snrna U1 U1 spliceosomal RNA 41410896 snorna SNORA49 Small nucleolar RNA SNORA49 8925030 pseudo LOC102016258 60S ribosomal protein L26 pseudogene NW_004955414 20216393 20216831 + 102016258 AGCD01015364 MODEL 8983370 protein-coding Was WASP actin nucleation promoting factor ENCODES a protein that exhibits identical protein binding (ortholog); phospholipase binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); actin filament-based movement (ortholog); actin polymerization or depolymerization (ortholog); ASSOCIATED WITH Cytomegalovirus Infections (ortholog); disease by infectious agent (ortholog); genetic disease (ortholog); FOUND IN actin filament (ortholog); cell-cell junction (ortholog); cytosol (ortholog) NW_004955543 243618 253489 + 102022858 AGCD01071569;GBBH01116435;XM_005411273 XP_005411330 MODEL 9049626 protein-coding Ptger2 prostaglandin E receptor 2 ENCODES a protein that exhibits prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); cAMP metabolic process (ortholog); ASSOCIATED WITH Abscess (ortholog); allergic asthma (ortholog); aspirin-induced respiratory disease (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog); synapse (ortholog) NW_004955409 10760801 10775197 - 102010556 AGCD01009482;AGCD01009483;GBDJ01164140;XM_005376782;XM_005376783;XM_013510326;XM_013510327 XP_005376839;XP_005376840;XP_013365780;XP_013365781 MODEL 8710965 protein-coding Spata2 spermatogenesis associated 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); signaling receptor complex adaptor activity (ortholog); ubiquitin-specific protease binding (ortholog); INVOLVED IN protein K63-linked deubiquitination (ortholog); protein linear deubiquitination (ortholog); regulation of inflammatory response (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955445 8281280 8292951 + 102003595 AGCD01039573;AGCD01039574;GBCB01074585;GBDF01180673;XM_013518262 XP_013373716 MODEL 8751269 protein-coding Rbm41 RNA binding motif protein 41 ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955490 8912616 8974748 + 102021135 AGCD01060298;GBBH01107168;XM_005404705;XM_005404706 XP_005404762;XP_005404763 MODEL 9031301 pseudo LOC102018201 heat shock factor-binding protein 1 pseudogene NW_004955426 14759883 14760171 + 102018201 AGCD01026402;XM_005386144 MODEL 9054942 protein-coding Rmp24 ribonuclease MRP subunit p24 INVOLVED IN RNA processing (ortholog); FOUND IN nucleus (ortholog); ribonuclease MRP complex (ortholog) NW_004955402 22573130 22580293 + 102007956 AGCD01000607;GBDF01158825;XM_005372803 XP_005372860 MODEL 8982804 protein-coding Ppie peptidylprolyl isomerase E ENCODES a protein that exhibits mRNA binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); poly(A) binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of viral genome replication (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955452 17242255 17256776 + 102028929 AGCD01044545;AGCD01044546;GBBH01228246;GBDJ01225065;XM_013519652 XP_013375106 MODEL 8809823 pseudo LOC102010813 60S ribosomal protein L7-like 1 pseudogene NW_004955421 23607848 23608582 + 102010813 AGCD01022191 MODEL 9041847 protein-coding Sec22a SEC22 homolog A, vesicle trafficking protein INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955427 22389552 22456149 + 102014266 AGCD01027466;AGCD01027467;AGCD01027468;GBDF01220231;XM_005386526;XM_013515189;XM_013515190 XP_005386583;XP_013370643;XP_013370644 MODEL 10388049 pseudo LOC106147421 zinc finger protein 615-like NW_004955558 567931 569339 - 106147421 AGCD01073376 MODEL 8891186 pseudo LOC102004783 histone deacetylase 8 pseudogene NW_004955456 1940192 1940884 - 102004783 AGCD01046243 MODEL 9021175 protein-coding Tpo thyroid peroxidase ENCODES a protein that exhibits iodide peroxidase activity (ortholog); INVOLVED IN cellular response to nitric oxide (ortholog); embryonic hemopoiesis (ortholog); response to lipid (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH autoimmune disease (ortholog); colon adenocarcinoma (ortholog); congenital hypothyroidism (ortholog); FOUND IN cell surface (ortholog) NW_004955487 485029 530287 - 102007022 AGCD01059218;AGCD01059219;AGCD01059220;AGCD01059221;GBDI01010368;GBDI01010369;XM_005404339 XP_005404396 MODEL 9024809 protein-coding Rps6ka4 ribosomal protein S6 kinase A4 ENCODES a protein that exhibits ATP binding (ortholog); histone H3S10 kinase activity (ortholog); histone H3S28 kinase activity (ortholog); INVOLVED IN interleukin-1-mediated signaling pathway (ortholog); intracellular signal transduction (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); synapse (ortholog) NW_004955422 20726286 20736841 - 102009515 AGCD01023086;GBCE01115327;XM_005384593 XP_005384650 MODEL 730469162 snorna SNORD45 Small nucleolar RNA SNORD45 8904491 pseudo LOC102005454 lupus La protein homolog pseudogene NW_004955412 30675648 30678489 + 102005454 AGCD01013305 MODEL 8869504 pseudo LOC102008107 olfactory receptor 56-like NW_004955418 29732474 29747780 + 102008107 AGCD01019481 MODEL 8929205 pseudo LOC102005835 transcription initiation factor TFIID subunit 2-like NW_004955433 1848991 1866778 - 102005835 AGCD01031371;AGCD01031372 MODEL 8787920 protein-coding Rai1 retinoic acid induced 1 INVOLVED IN circadian regulation of gene expression (ortholog); negative regulation of multicellular organism growth (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955577 185404 296613 - 102015065 AGCD01075384;AGCD01075385;AGCD01075386;AGCD01075387;AGCD01075388;GBBH01207954;XM_005413962;XM_005413965;XM_005413966;XM_013509617;XM_013509618;XM_013509619;XR_265076 XP_005414019;XP_005414022;XP_005414023;XP_013365071;XP_013365072;XP_013365073 MODEL 8715714 pseudo LOC102019411 probable global transcription activator SNF2L2 NW_004955500 1745320 1748206 + 102019411 AGCD01063681 MODEL 730469351 snorna SNORA30 Small nucleolar RNA SNORA30/SNORA37 family 8898401 protein-coding LOC102019776 interferon-inducible GTPase 1-like NW_004955408 5863062 5868671 + 102019776 AGCD01008158;GBDJ01218355;XM_005376159 XP_005376216 MODEL 8988216 protein-coding Tia1 TIA1 cytotoxic granule associated RNA binding protein ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of cytokine production (ortholog); negative regulation of translation (ortholog); positive regulation of epithelial cell apoptotic process (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 26 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955424 14887722 14920844 + 102006791 AGCD01024664;GBDF01163127;XM_005385618;XM_005385619;XM_005385620;XM_005385621;XM_005385622;XM_005385623;XM_013514641;XR_001234178 XP_005385675;XP_005385676;XP_005385677;XP_005385678;XP_005385679;XP_005385680;XP_013370095 MODEL 8818651 protein-coding Prrg2 proline rich and Gla domain 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955559 1279601 1287182 - 102012254 AGCD01073639;GBDK01142745;XM_005412865;XM_013508986;XM_013508987;XM_013508988 XP_005412922;XP_013364440;XP_013364441;XP_013364442 MODEL 8885737 protein-coding Slc30a1 solute carrier family 30 member 1 ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); calcium:monoatomic cation antiporter activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN cadmium ion transmembrane transport (ortholog); calcium ion import (ortholog); copper ion transport (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); visual epilepsy (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955406 5662312 5668331 + 102014742 AGCD01005735;GBDF01051945;XM_013520219 XP_013375673 MODEL 9058451 protein-coding Pgm2l1 phosphoglucomutase 2 like 1 ENCODES a protein that exhibits glucose-1,6-bisphosphate synthase activity (ortholog); phosphoglucomutase activity (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen storage disease type III pathway; glycogen storage disease type IV pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955414 17240987 17310210 + 102006649 AGCD01015235;AGCD01015236;GBCB01005167;XM_005379916;XM_005379917 XP_005379973;XP_005379974 MODEL 8708333 ncrna LOC102008854 uncharacterized LOC102008854 NW_004955418 25551560 25572621 - 102008854 AGCD01019367;GBDF01180351;XR_260584 MODEL 9014683 protein-coding Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-3-kinase regulator activity (ortholog); ATPase binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to fatty acid (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); agammaglobulinemia 7 (ortholog); Alzheimer's disease (ortholog); FOUND IN cell-cell junction (ortholog); cis-Golgi network (ortholog); cytoplasm (ortholog) NW_004955446 1020707 1098327 - 102010955 AGCD01039951;AGCD01039952;GBDK01077429;XM_005392596;XM_005392597 XP_005392653;XP_005392654 MODEL 39132903 snrna U1 U1 spliceosomal RNA 730469426 snorna SNORA17 Small nucleolar RNA SNORA17 8940011 pseudo LOC102002996 mitochondrial fission factor-like NW_004955455 354378 355152 + 102002996 AGCD01045556 MODEL 8778321 pseudo LOC102011611 spliceosome-associated protein CWC15 homolog pseudogene NW_004955403 25832090 25832764 + 102011611 AGCD01002295 MODEL 9058763 protein-coding Sptlc2 serine palmitoyltransferase long chain base subunit 2 ENCODES a protein that exhibits serine C-palmitoyltransferase activity (ortholog); INVOLVED IN adipose tissue development (ortholog); ceramide biosynthetic process (ortholog); glycosphingolipid biosynthetic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); blood coagulation disease (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); serine palmitoyltransferase complex (ortholog) NW_004955438 1385431 1491534 - 102018224 AGCD01034981;AGCD01034982;AGCD01034983;AGCD01034984;AGCD01034985;GBCE01023390;XM_005390209 XP_005390266 MODEL 8824521 pseudo LOC102004025 ADP-ribosylation factor-like protein 4A NW_004955402 1033825 1036943 + 102004025 AGCD01000045 MODEL 8963478 protein-coding LOC102016261 olfactory receptor 10T2-like NW_004955414 23540528 23541493 + 102016261 AGCD01015501;XM_005380519 XP_005380576 MODEL 8735670 pseudo LOC102006187 serine/threonine/tyrosine-interacting protein pseudogene NW_004955588 34411 37242 - 102006187 AGCD01076076;AGCD01076077 MODEL 8772909 protein-coding Pld5 phospholipase D family member 5 ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955406 5810286 5994601 - 102027264 AGCD01005742;AGCD01005743;AGCD01005744;GBBH01226778;XM_013520242;XM_013520247 XP_013375696;XP_013375701 MODEL 8735224 ncrna LOC102019414 uncharacterized LOC102019414 NW_004955504 6797808 6800456 + 102019414 AGCD01064930;GBDJ01316295;XR_264297 MODEL 9031711 ncrna LOC102005842 uncharacterized LOC102005842 NW_004955439 2255721 2292358 + 102005842 AGCD01035638;AGCD01035639;AGCD01035640;GBBH01163336;XR_001235211;XR_001235212;XR_261967 MODEL 8971611 protein-coding LOC102008488 palladin NW_004955403 37248908 37286650 - 102008488 AGCD01002565;GBCQ01040632;GBDJ01020208;XM_013513428 XP_013368882 MODEL 9011050 pseudo LOC102011180 multifunctional protein ADE2-like NW_004955458 11807530 11818009 - 102011180 AGCD01047760 MODEL 39131383 protein-coding PTGER3 prostaglandin E receptor 3 8843634 protein-coding Trmt1 tRNA methyltransferase 1 ENCODES a protein that exhibits tRNA (guanine(26)-N2)-dimethyltransferase activity (ortholog); INVOLVED IN tRNA N2-guanine methylation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 68 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955415 32126630 32136770 - 102029616 AGCD01016710;AGCD01016711;GBDF01119256;XM_013512177 XP_013367631 MODEL 9026136 pseudo LOC102010005 39S ribosomal protein L47, mitochondrial pseudogene NW_004955449 1853430 1854383 + 102010005 AGCD01041814;XM_005393196 MODEL 39132831 snorna SNORA73 Small nucleolar RNA SNORA73 family 8959807 protein-coding Rfx7 regulatory factor X7 ENCODES a protein that exhibits RNA polymerase II core promoter sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 71 with behavioral abnormalities (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleus (ortholog) NW_004955409 59535 121157 + 102006985 AGCD01009138;GBDI01261564;XM_005376598;XM_005376600;XM_005376601 XP_005376655;XP_005376657;XP_005376658 MODEL 8756270 ncrna LOC102013201 uncharacterized LOC102013201 NW_004955514 2802131 2803038 - 102013201 AGCD01067089;GBDF01249222;XR_264503 MODEL 8964918 protein-coding LOC102012015 carboxylesterase 1D-like NW_004955433 13630963 13654307 - 102012015 AGCD01031696;GBDF01156979;XM_013516095;XM_013516096 XP_013371549;XP_013371550 MODEL 9011784 protein-coding Podn podocan ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955464 6070842 6084463 - 102013705 AGCD01050017;GBBH01062255;GBDK01075021;XM_013521746 XP_013377200 MODEL 9024646 protein-coding Robo2 roundabout guidance receptor 2 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN aorta development (ortholog); aortic valve morphogenesis (ortholog); apoptotic process involved in luteolysis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); bicuspid aortic valve disease (ortholog); Brain Injuries (ortholog); FOUND IN axolemma (ortholog); cell surface (ortholog); glutamatergic synapse (ortholog) NW_004955407 14301689 15549561 - 102003515 AGCD01007168;AGCD01007169;AGCD01007170;AGCD01007171;AGCD01007172;AGCD01007173;AGCD01007174;AGCD01007175;AGCD01007176;AGCD01007177;AGCD01007178;AGCD01007179;AGCD01007180;AGCD01007181;AGCD01007182;AGCD01007183;AGCD01007184;AGCD01007185;AGCD01007186;AGCD01007187;AGCD01007188;AGCD01007189;AGCD01007190;AGCD01007191;AGCD01007192;AGCD01007193;AGCD01007194;AGCD01007195;GBCQ01164072;XM_005375549;XM_013503734;XM_013503739;XM_013503742;XM_013503749;XM_013503753;XM_013503754;XM_013503756;XM_013503759;XM_013503761;XM_013503763 XP_005375606;XP_013359188;XP_013359193;XP_013359196;XP_013359203;XP_013359207;XP_013359208;XP_013359210;XP_013359213;XP_013359215;XP_013359217 MODEL 8717966 protein-coding Ppif peptidylprolyl isomerase F ENCODES a protein that exhibits cyclosporin A binding (ortholog); enzyme inhibitor activity (ortholog); peptide binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); apoptotic process (ortholog); cellular response to arsenic-containing substance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial permeability transition pore complex (ortholog) NW_004955437 13295766 13301918 - 102018024 AGCD01034655;GBCQ01093166;XM_005389888 XP_005389945 MODEL 39131379 protein-coding SNTB2 syntrophin beta 2 10154744 protein-coding LOC106150321 zinc finger protein ZFPM1-like NW_004955471 7026730 7029784 + 106150321 AGCD01053133;GBDF01192432;XM_013522904 XP_013378358 MODEL 39133328 snrna U4 U4 spliceosomal RNA 8954275 ncrna LOC102005457 uncharacterized LOC102005457 NW_004955413 21113074 21147758 + 102005457 AGCD01014246;AGCD01014247;GBBH01122379;XR_001232964;XR_001232965;XR_001232966 MODEL 8832729 protein-coding Tpp1 tripeptidyl peptidase 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); lysophosphatidic acid binding (ortholog); peptidase activity (ortholog); INVOLVED IN bone resorption (ortholog); epithelial cell differentiation (ortholog); lysosomal protein catabolic process (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); Alzheimer's disease (ortholog); asthma (ortholog); FOUND IN Golgi apparatus (ortholog); lysosome (ortholog); melanosome (ortholog) NW_004955414 22324847 22330912 - 102028524 AGCD01015453;GBCE01099114;XM_005380168;XM_005380169 XP_005380225;XP_005380226 MODEL 39132836 snorna SNORA5 Small nucleolar RNA SNORA5 8952073 protein-coding LOC102007302 chromosome unknown open reading frame, human C7orf57 ASSOCIATED WITH cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955456 5399326 5414002 - 102007302 AGCD01046327;GBDK01321191;XM_005396629 XP_005396686 MODEL 8804124 protein-coding Prdx6 peroxiredoxin 6 ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); A2-type glycerophospholipase activity (ortholog); glutathione peroxidase activity (ortholog); INVOLVED IN bleb assembly (ortholog); cellular oxidant detoxification (ortholog); glycerophospholipid catabolic process (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); arteriosclerosis (ortholog); chronic rhinosinusitis with nasal polyps (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lysosome (ortholog) NW_004955406 13717267 13728216 + 102005889 AGCD01005949;AGCD01005950;GBDK01014441;XM_005374867 XP_005374924 MODEL 8999719 protein-coding LOC102019780 uncharacterized LOC102019780 NW_004955409 8008074 8010374 - 102019780 AGCD01009374;XM_005376728 XP_005376785 MODEL 8845910 pseudo LOC102022301 ubiquitin carboxyl-terminal hydrolase 44-like NW_004955489 6080515 6085343 - 102022301 AGCD01059957 MODEL 8793580 protein-coding Rbm42 RNA binding motif protein 42 INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN precatalytic spliceosome (ortholog); spliceosomal complex (ortholog); U4/U6 x U5 tri-snRNP complex (ortholog) NW_004955468 4844780 4854261 + 102024989 AGCD01051922;GBDI01067655;XM_005400070;XM_005400071 XP_005400127;XP_005400128 MODEL 8761916 protein-coding Rmp64 ribonuclease MRP subunit p64 INVOLVED IN negative regulation of neuron differentiation (ortholog); positive regulation of Notch signaling pathway (ortholog); RNA processing (ortholog); ASSOCIATED WITH anauxetic dysplasia 3 (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955427 13232375 13247164 - 102029987 AGCD01027241;AGCD01027242;GBDI01385924;XM_005386394;XM_013515165 XP_005386451;XP_013370619 MODEL 8940843 protein-coding Rps6ka5 ribosomal protein S6 kinase A5 ENCODES a protein that exhibits ATP binding (ortholog); histone H2AS1 kinase activity (ortholog); histone H3S10 kinase activity (ortholog); INVOLVED IN interleukin-1-mediated signaling pathway (ortholog); intracellular signal transduction (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955438 13218451 13392080 - 102015148 AGCD01035281;AGCD01035282;AGCD01035283;AGCD01035284;AGCD01035285;GBDI01209041;XM_005390286;XM_013517243;XM_013517244 XP_005390343;XP_013372697;XP_013372698 MODEL 8813480 pseudo LOC102010817 60S ribosomal protein L9 pseudogene NW_004955424 4777949 4778494 + 102010817 AGCD01024365 MODEL 9011623 pseudo LOC102004784 40S ribosomal protein S8 pseudogene NW_004955457 6388635 6389329 - 102004784 AGCD01046838 MODEL 8921979 protein-coding Btf3l4 basic transcription factor 3 like 4 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955464 7044634 7069593 - 102022796 AGCD01050053;GBCE01116828;XM_005398593;XM_005398594;XM_005398595 XP_005398650;XP_005398651;XP_005398652 MODEL 8995959 protein-coding Sec22b SEC22 homolog B, vesicle trafficking protein INVOLVED IN negative regulation of autophagosome assembly (ortholog); positive regulation of protein catabolic process (ortholog); vesicle-mediated transport (ortholog); FOUND IN COPI-coated vesicle (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955568 1559519 1587782 + 102018869 AGCD01074547;AGCD01074548;AGCD01074549;AGCD01074550;GBDF01160336;XM_005413480 XP_005413537 MODEL 8861262 pseudo LOC102003001 E3 SUMO-protein ligase PIAS2 pseudogene NW_004955409 16215943 16246882 + 102003001 AGCD01009715;AGCD01009716;AGCD01009717 MODEL 8706553 protein-coding Tial1 TIA1 cytotoxic granule associated RNA binding protein like 1 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); protein-RNA adaptor activity (ortholog); INVOLVED IN germ cell development (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytolytic granule (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) NW_004955551 370792 395836 - 102010637 AGCD01072655;GBCQ01042559;XM_005412159;XM_005412160;XM_013508586;XM_013508587 XP_005412216;XP_005412217;XP_013364040;XP_013364041 MODEL 9064904 protein-coding Sptlc3 serine palmitoyltransferase long chain base subunit 3 ENCODES a protein that exhibits serine C-palmitoyltransferase activity (ortholog); INVOLVED IN sphingoid biosynthetic process (ortholog); sphingosine biosynthetic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); neuropathy (ortholog); FOUND IN serine palmitoyltransferase complex (ortholog) NW_004955415 22532193 22686071 + 102028854 AGCD01016539;AGCD01016540;AGCD01016541;GBDF01224715;XM_013512291;XM_013512292 XP_013367745;XP_013367746 MODEL 9006043 protein-coding Spata20 spermatogenesis associated 20 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955451 11199115 11205978 - 102003716 AGCD01043342;GBDF01005759;XM_005394130 XP_005394187 MODEL 9049996 protein-coding Wasf1 WASP family member 1 ENCODES a protein that exhibits protein kinase A binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); dendrite extension (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); brain disease (ortholog); FOUND IN cytoplasm (ortholog); lamellipodium (ortholog); mitochondrial outer membrane (ortholog) NW_004955411 34893287 34966670 - 102022176 AGCD01012417;AGCD01012418;GBDF01123264;XM_005377883;XM_005377884;XM_013510825 XP_005377940;XP_005377941;XP_013366279 MODEL 8888481 protein-coding Pld6 phospholipase D family member 6 ENCODES a protein that exhibits cardiolipin phospholipase D activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); mitochondrial fusion (ortholog); P granule organization (ortholog); PARTICIPATES IN mitochondria fusion pathway; ASSOCIATED WITH male infertility (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN Golgi apparatus (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955577 698741 702977 + 102025634 AGCD01075411;AGCD01075412;GBCB01110589;XM_013509636 XP_013365090 MODEL 9049939 protein-coding LOC102018205 carbonyl reductase [NADPH] 2 NW_004955506 1131548 1133857 + 102018205 AGCD01065246;GBDF01237291;XM_005407225 XP_005407282 MODEL 8986029 protein-coding Slc30a10 solute carrier family 30 member 10 ENCODES a protein that exhibits calcium:manganese antiporter activity (ortholog); manganese ion transmembrane transporter activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); epidermal growth factor receptor signaling pathway (ortholog); intracellular copper ion homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholestasis (ortholog); dystonia (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); Golgi apparatus (ortholog) NW_004955520 3631192 3641595 + 102004311 AGCD01068107;AGCD01068108;XM_005409285 XP_005409342 MODEL 8728347 protein-coding Pgm3 phosphoglucomutase 3 ENCODES a protein that exhibits phosphoacetylglucosamine mutase activity (ortholog); INVOLVED IN hemopoiesis (ortholog); protein N-linked glycosylation (ortholog); protein O-linked glycosylation (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; glycogen biosynthetic pathway; ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); genetic disease (ortholog) NW_004955411 10904022 10925613 - 102012839 AGCD01011796;AGCD01011797;GBDF01157543;GBDJ01317986;XM_013510758 XP_013366212 MODEL 39132906 snrna U1 U1 spliceosomal RNA 8966527 pseudo LOC102010007 inaD-like protein pseudogene NW_004955402 42875359 42877029 - 102010007 AGCD01001050 MODEL 8817914 protein-coding Podnl1 podocan like 1 ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955415 32683256 32688736 - 102007425 AGCD01016730;GBDI01215428;XM_005381073;XM_013512208;XM_013512209;XM_013512210;XM_013512211 XP_005381130;XP_013367662;XP_013367663;XP_013367664;XP_013367665 MODEL 8883847 protein-coding Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 ENCODES a protein that exhibits phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); phosphotyrosine residue binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); insulin receptor signaling pathway (ortholog); intracellular glucose homeostasis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FasL mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN focal adhesion (ortholog); nucleus (ortholog); phosphatidylinositol 3-kinase complex, class IA (ortholog) NW_004955524 3234111 3241445 - 102011143 AGCD01068870;AGCD01068871;GBCE01137903;GBDF01123732;XM_013507263 XP_013362717 MODEL 730469560 snorna SNORA17 Small nucleolar RNA SNORA17 730468943 snorna SNORD45 Small nucleolar RNA SNORD45 10391195 protein-coding LOC106147422 kallikrein-4-like NW_004955558 1567523 1573538 + 106147422 AGCD01073448;XM_013508848 XP_013364302 MODEL 8723544 pseudo LOC102016269 tigger transposable element-derived protein 1-like NW_004955417 13872785 13876028 + 102016269 AGCD01018191 MODEL 8957830 protein-coding LOC102006191 zinc finger protein 449-like NW_004955602 489329 501914 + 102006191 AGCD01076788;AGCD01076789;XM_013510075 XP_013365529 MODEL 9055423 protein-coding Sntg1 syntrophin gamma 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); ruffle membrane (ortholog) NW_004955454 9698609 10439874 + 102026291 AGCD01045349;AGCD01045350;AGCD01045351;AGCD01045352;AGCD01045353;AGCD01045354;AGCD01045355;AGCD01045356;AGCD01045357;AGCD01045358;AGCD01045359;AGCD01045360;AGCD01045361;AGCD01045362;AGCD01045363;AGCD01045364;AGCD01045365;AGCD01045366;GBDF01142064;XM_005396048;XM_005396049;XM_005396050 XP_005396105;XP_005396106;XP_005396107 MODEL 730469419 snorna SNORA30 Small nucleolar RNA SNORA30/SNORA37 family 8801845 protein-coding Rai14 retinoic acid induced 14 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN anchoring junction (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955426 19831811 19980717 + 102029537 AGCD01026554;AGCD01026555;AGCD01026556;AGCD01026557;AGCD01026558;AGCD01026559;AGCD01026560;GBBH01006738;XM_005386173;XM_005386174;XM_005386175;XM_013514963 XP_005386230;XP_005386231;XP_005386232;XP_013370417 MODEL 8892781 protein-coding Prrg3 proline rich and Gla domain 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955498 7217550 7227685 + 102008552 AGCD01063146;GBCE01183264;XM_005406442;XM_005406443 XP_005406499;XP_005406500 MODEL 8760439 pseudo LOC102005851 40S ribosomal protein S2-like NW_004955444 6571938 6576569 - 102005851 AGCD01038872;XR_262283 MODEL 8813481 ncrna LOC102011190 uncharacterized LOC102011190 NW_004955413 27903491 27912153 + 102011190 AGCD01014537;GBDI01285497;XR_260120 MODEL 8755411 protein-coding Ptger3 prostaglandin E receptor 3 ENCODES a protein that exhibits prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); bicarbonate transport (ortholog); cAMP biosynthetic process (ortholog); ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); Brain Injuries (ortholog); FOUND IN brush border membrane (ortholog); cell surface (ortholog); neuronal cell body (ortholog) NW_004955423 21096926 21164435 + 102004944 AGCD01023935;GBDF01208544;XM_005385244 XP_005385301 MODEL 8950182 protein-coding Epb41l5 erythrocyte membrane protein band 4.1 like 5 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); apical constriction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) NW_004955459 9641926 9783718 - 102017547 AGCD01048164;AGCD01048165;AGCD01048166;AGCD01048167;AGCD01048168;AGCD01048169;AGCD01048170;AGCD01048171;GBCE01115046;XM_005397654;XM_005397658;XM_005397659 XP_005397711;XP_005397715;XP_005397716 MODEL 39132835 snorna SNORA73 Small nucleolar RNA SNORA73 family 8769765 pseudo LOC102013205 DCN1-like protein 1 pseudogene NW_004955523 1164391 1165382 - 102013205 AGCD01068503 MODEL 8900040 pseudo LOC102012019 RNA-binding motif protein, X chromosome-like NW_004955436 8932484 8933843 - 102012019 AGCD01033755;XR_261778 MODEL 8803581 protein-coding LOC102011614 translation initiation factor IF-2-like NW_004955451 13182675 13184330 - 102011614 AGCD01043458;GBDK01206490;XM_005394257;XR_001235982 XP_005394314 MODEL 8710505 pseudo LOC102008855 S-formylglutathione hydrolase pseudogene NW_004955483 8647789 8648240 - 102008855 AGCD01057841 MODEL 8831395 protein-coding Tiam1 TIAM Rac1 associated GEF 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); kinase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); brain-derived neurotrophic factor receptor signaling pathway (ortholog); cardiac muscle hypertrophy (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axonal growth cone (ortholog); cell junction (ortholog); cell-cell contact zone (ortholog) NW_004955407 30804769 31178420 - 102012732 AGCD01007639;AGCD01007640;AGCD01007641;AGCD01007642;GBDF01087706;XM_005375657;XM_005375658;XM_005375660;XM_013504080;XM_013504086;XM_013504090 XP_005375714;XP_005375715;XP_005375717;XP_013359534;XP_013359540;XP_013359544 MODEL 9063648 ncrna LOC102008856 uncharacterized LOC102008856 NW_004955484 4129624 4136398 + 102008856 AGCD01058202;GBDF01220583;XR_001231058;XR_001231059;XR_001231060;XR_001231061;XR_263884 MODEL 8978227 protein-coding LOC102004028 uncharacterized PE-PGRS family protein PE_PGRS3-like NW_004955451 11193050 11196987 + 102004028 AGCD01043342;GBCE01114159;XM_005394131;XM_013519091;XM_013519092 XP_005394188;XP_013374545;XP_013374546 MODEL 8769283 protein-coding Btg1 BTG anti-proliferation factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); disease of cellular proliferation (ortholog); multiple myeloma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955405 29206889 29209407 - 102021082 AGCD01005248;GBCB01021122;XM_005374452 XP_005374509 MODEL 9011336 protein-coding LOC102019416 chromosome unknown open reading frame, human C3orf52 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955427 12488729 12518512 + 102019416 AGCD01027216;AGCD01027217;AGCD01027218;GBCE01142565;GBDK01395430;XM_005386611 XP_005386668 MODEL 39133329 snrna U4 U4 spliceosomal RNA 8742636 protein-coding Setd3 SET domain containing 3, actin N3(tau)-histidine methyltransferase ENCODES a protein that exhibits histone H3K36 methyltransferase activity (ortholog); histone H3K4 methyltransferase activity (ortholog); protein-L-histidine N-tele-methyltransferase activity (ortholog); INVOLVED IN actin filament organization (ortholog); positive regulation of muscle cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955438 20754593 20826570 - 102028681 AGCD01035521;AGCD01035522;AGCD01035523;GBDF01008952;XM_005390415;XM_005390417 XP_005390472;XP_005390474 MODEL 8865132 protein-coding Tpp2 tripeptidyl peptidase 2 ENCODES a protein that exhibits aminopeptidase activity (ortholog); identical protein binding (ortholog); peptide binding (ortholog); INVOLVED IN intracellular amino acid homeostasis (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog) NW_004955404 8465877 8528372 - 102018461 AGCD01003353;GBDF01050175;GBDF01050177;XM_013515923 XP_013371377 MODEL 8787459 protein-coding Spata21 spermatogenesis associated 21 ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955527 1903607 1939020 + 102028460 AGCD01069420;GBBH01023649;XM_013507378;XM_013507379;XM_013507380;XM_013507381;XM_013507382;XM_013507383;XM_013507384 XP_013362832;XP_013362833;XP_013362834;XP_013362835;XP_013362836;XP_013362837;XP_013362838 MODEL 8978794 protein-coding Preb prolactin regulatory element binding ENCODES a protein that exhibits GTPase binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN COPII vesicle coat assembly (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN endoplasmic reticulum exit site (ortholog); endoplasmic reticulum membrane (ortholog); nucleus (ortholog) NW_004955469 9097579 9101361 - 102020649 AGCD01052489;GBCQ01068510;XM_005400456;XM_005400457 XP_005400513;XP_005400514 MODEL 9018318 protein-coding Trmt10a tRNA methyltransferase 10A ENCODES a protein that exhibits tRNA (guanosine(9)-N1)-methyltransferase activity (ortholog); tRNA binding (ortholog); INVOLVED IN magnesium ion homeostasis (ortholog); tRNA methylation (ortholog); tRNA N1-guanine methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955496 8021747 8037562 + 102023493 AGCD01062387;GBDI01279046;XM_005406269;XM_005406270 XP_005406326;XP_005406327 MODEL 8972611 pseudo LOC102018206 protein slowmo homolog 2 pseudogene NW_004955428 4184563 4185357 + 102018206 AGCD01027669 MODEL 9059505 protein-coding LOC102022303 spermatogenesis-associated protein 31E1-like NW_004955491 31398 33727 - 102022303 AGCD01060313;XM_005404875 XP_005404932 MODEL 730469545 misc_rna RMST_1 Rhabdomyosarcoma 2 associated transcript conserved region 1 8752547 protein-coding Robo3 roundabout guidance receptor 3 INVOLVED IN axon guidance (ortholog); axon midline choice point recognition (ortholog); commissural neuron axon guidance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Brain Injuries (ortholog); FOUND IN axon (ortholog) NW_004955412 25937624 25953458 + 102015822 AGCD01013180;GBDF01172801;XM_005378445 XP_005378502 MODEL 9064120 protein-coding Ppig peptidylprolyl isomerase G ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear matrix (ortholog); nuclear speck (ortholog) NW_004955449 4915747 4958456 - 102027130 AGCD01041902;AGCD01041903;GBBH01033225;XM_005393254;XM_005393255;XM_005393256 XP_005393311;XP_005393312;XP_005393313 MODEL 10280505 ncrna LOC106150322 uncharacterized LOC106150322 NW_004955471 2855868 2858402 - 106150322 AGCD01053049;GBCB01110176;XR_001237059 MODEL 9009511 ncrna LOC102008109 uncharacterized LOC102008109 NW_004955419 15542763 15563815 - 102008109 AGCD01020083;GBDF01286433;XR_260633 MODEL 9045347 protein-coding Rfx8 regulatory factor X8 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955470 7128811 7191466 - 102017765 AGCD01052792;AGCD01052793;AGCD01052794;GBDF01085190;XM_005400761 XP_005400818 MODEL 8943198 pseudo LOC102004786 mitochondrial pyruvate carrier 2 pseudogene NW_004955408 33338349 33338731 + 102004786 AGCD01008867 MODEL 730469087 snorna SNORD45 Small nucleolar RNA SNORD45 8877060 protein-coding Sptssa serine palmitoyltransferase small subunit A ENCODES a protein that exhibits serine C-palmitoyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); glycosphingolipid biosynthetic process (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH hereditary spastic paraplegia 90A (ortholog); hereditary spastic paraplegia 90B (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955409 26460208 26460854 + 102007411 AGCD01010186;GBCC01001541;GBDF01085842;XM_005376942 XP_005376999 MODEL 8780673 protein-coding LOC102006193 PRAME family member 22-like NW_004955615 261822 264278 + 102006193 AGCD01077252;XM_013510140 XP_013365594 MODEL 8988619 protein-coding Rps6ka6 ribosomal protein S6 kinase A6 INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of embryonic development (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog); synapse (ortholog) NW_004955529 3115652 3296505 - 102021480 AGCD01069784;AGCD01069785;GBDJ01193816;XM_005410079;XM_013507539 XP_005410136;XP_013362993 MODEL 8700329 protein-coding LOC102007304 zinc finger protein 354B NW_004955408 1507667 1520239 - 102007304 AGCD01007961;AGCD01007962;GBCB01038326;GBCE01165511;XM_005376027;XM_013507968 XP_005376084;XP_013363422 MODEL 8795766 protein-coding Rbm43 RNA binding motif protein 43 ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955440 16836877 16843414 - 102018986 AGCD01036533;GBBH01065800;XM_013517442 XP_013372896 MODEL 8852732 protein-coding Slc30a2 solute carrier family 30 member 2 ENCODES a protein that exhibits identical protein binding (ortholog); zinc ion transmembrane transporter activity (ortholog); zinc:proton antiporter activity (ortholog); INVOLVED IN intracellular zinc ion homeostasis (ortholog); zinc export across plasma membrane (ortholog); zinc ion import into lysosome (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); genetic disease (ortholog); Neonatal Zinc Deficiency due to Low Breast Milk Zinc (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog); endosome membrane (ortholog) NW_004955452 5507614 5515669 - 102012051 AGCD01044037;GBDI01355605;XM_005394839 XP_005394896 MODEL 9034745 protein-coding Plec plectin ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ankyrin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); actomyosin contractile ring assembly actin filament organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basal plasma membrane (ortholog) NW_004955454 2583138 2644308 - 102016445 AGCD01045025;AGCD01045026;GBCE01030252;XM_005395823;XM_005395824;XM_005395825;XM_005395826;XM_005395827;XM_005395828;XM_005395829;XM_005395830;XM_005395832;XM_013520104 XP_005395880;XP_005395881;XP_005395882;XP_005395883;XP_005395884;XP_005395885;XP_005395886;XP_005395887;XP_005395889;XP_013375558 MODEL 39132911 snrna U1 U1 spliceosomal RNA 8721160 protein-coding LOC102013213 uncharacterized LOC102013213 NW_004955538 373207 647107 + 102013213 AGCD01070995;AGCD01070996;AGCD01070997;AGCD01070998;AGCD01070999;AGCD01071000;AGCD01071001;AGCD01071002;AGCD01071003;AGCD01071004;AGCD01071005;AGCD01071006;AGCD01071007;AGCD01071008;AGCD01071009;AGCD01071010;AGCD01071011;AGCD01071012;AGCD01071013;AGCD01071014;AGCD01071015;AGCD01071016;AGCD01071017;AGCD01071018;AGCD01071019;AGCD01071020;AGCD01071021;AGCD01071022;AGCD01071023;AGCD01071024;AGCD01071025;AGCD01071026;AGCD01071027;AGCD01071028;AGCD01071029;AGCD01071030;AGCD01071031;AGCD01071032;GBDF01017551;XM_005410885 XP_005410942 MODEL 8821840 protein-coding LOC102010015 probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2 NW_004955785 867 11463 + 102010015 AGCD01078339;AGCD01078340;AGCD01078341;AGCD01078342;XM_013510191 XP_013365645 MODEL 730469575 snorna SNORA17 Small nucleolar RNA SNORA17 8828809 protein-coding Pik3r4 phosphoinositide-3-kinase regulatory subunit 4 INVOLVED IN autophagosome maturation (ortholog); cellular response to glucose starvation (ortholog); early endosome to late endosome transport (ortholog); PARTICIPATES IN autophagy pathway; inositol metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN axoneme (ortholog); late endosome (ortholog); phosphatidylinositol 3-kinase complex, class III (ortholog) NW_004955501 7604934 7681947 + 102013949 AGCD01064219;AGCD01064220;AGCD01064221;GBDI01138465;XM_005406858;XM_005406859;XM_005406860 XP_005406915;XP_005406916;XP_005406917 MODEL 8855346 protein-coding LOC102010819 lariat debranching enzyme NW_004955501 832433 846485 + 102010819 AGCD01064041;AGCD01064042;GBDF01305392;XM_005406750 XP_005406807 MODEL 8917398 protein-coding Podxl podocalyxin like INVOLVED IN cell migration (ortholog); epithelial tube formation (ortholog); leukocyte migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); carotid artery disease (ortholog); early-onset Parkinson's disease (ortholog); FOUND IN apical plasma membrane (ortholog); cell body (ortholog); cytoplasm (ortholog) NW_004955410 36191797 36239970 + 102007635 AGCD01011422;GBBH01063522;GBCB01119929;XM_005377546 XP_005377603 MODEL 8723968 pseudo LOC102008864 solute carrier family 25 member 36-like NW_004955421 22468586 22469764 + 102008864 AGCD01022136 MODEL 39132098 snorna SNORA30 Small nucleolar RNA SNORA30/SNORA37 family 10365421 protein-coding LOC106147423 kallikrein-4-like NW_004955558 2223068 2242462 + 106147423 AGCD01073528;AGCD01073529;AGCD01073530;AGCD01073531;XM_013508852 XP_013364306 MODEL 8948569 protein-coding Wasf2 WASP family member 2 ENCODES a protein that exhibits protein kinase A binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament-based movement (ortholog); ameboidal-type cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell-cell junction (ortholog); early endosome (ortholog) NW_004955452 6658854 6733964 - 102004775 AGCD01044118;AGCD01044119;AGCD01044120;AGCD01044121;AGCD01044122;AGCD01044123;AGCD01044124;GBCE01074273;XM_005394909;XM_013519649 XP_005394966;XP_013375103 MODEL 8758640 protein-coding Sec22c SEC22 homolog C, vesicle trafficking protein ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955420 28210912 28227015 + 102028198 AGCD01021472;AGCD01021473;GBCQ01013530;XM_005383543;XM_005383544;XM_013513579;XM_013513580 XP_005383600;XP_005383601;XP_013369033;XP_013369034 MODEL 8915383 protein-coding Sntg2 syntrophin gamma 2 ENCODES a protein that exhibits neuroligin family protein binding (ortholog); PDZ domain binding (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955487 533719 639056 - 102007345 AGCD01059221;AGCD01059222;AGCD01059223;AGCD01059224;GBDK01266841;XM_005404340;XM_013504329;XM_013504330;XM_013504331;XM_013504332 XP_005404397;XP_013359783;XP_013359784;XP_013359785;XP_013359786 MODEL 8885335 protein-coding Rai2 retinoic acid induced 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); dextrocardia (ortholog) NW_004955519 494463 553839 + 102030562 AGCD01067876;AGCD01067877;GBCE01153611;GBDJ01234060;XM_005409127 XP_005409184 MODEL 8906087 protein-coding Prrg4 proline rich and Gla domain 4 ENCODES a protein that exhibits WW domain binding (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog); plasma membrane (ortholog) NW_004955422 13305422 13327188 - 102026876 AGCD01022820;AGCD01022821;GBBH01077083;GBDK01181646;XM_013514331 XP_013369785 MODEL 8967426 ncrna LOC102011192 uncharacterized LOC102011192 NW_004955469 9744913 9758948 + 102011192 AGCD01052516;GBCB01088434;XR_263445 MODEL 8928362 protein-coding Epb42 erythrocyte membrane protein band 4.2 INVOLVED IN cell morphogenesis (ortholog); hemoglobin metabolic process (ortholog); monoatomic ion homeostasis (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spherocytosis (ortholog); hereditary spherocytosis type 1 (ortholog); FOUND IN ankyrin-1 complex (ortholog); cortical cytoskeleton (ortholog); membrane (ortholog) NW_004955416 9784211 9800453 - 102029963 AGCD01017099;GBBH01193362;XM_005381368 XP_005381425 MODEL 8855321 protein-coding Pgm5 phosphoglucomutase 5 ENCODES a protein that exhibits intramolecular phosphotransferase activity (ortholog); phosphoglucomutase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN adherens junction (ortholog); cell-substrate junction (ortholog); costamere (ortholog) NW_004955434 4489054 4670879 - 102009869 AGCD01032163;AGCD01032164;AGCD01032165;AGCD01032166;GBBH01126452;GBCB01073451;XM_005388582 XP_005388639 MODEL 39132839 snorna SNORA73 Small nucleolar RNA SNORA73 family 8992459 ncrna LOC102012023 uncharacterized LOC102012023 NW_004955437 2178719 2183875 + 102012023 AGCD01034261;AGCD01034262;GBDF01160448;XR_001235086;XR_001235087;XR_001235088 MODEL 8897119 ncrna LOC102008489 uncharacterized LOC102008489 NW_004956123 1825 3767 - 102008489 AGCD01079091;GBDF01090413;XR_001232607;XR_265205 MODEL 9012143 protein-coding Ptger4 prostaglandin E receptor 4 ENCODES a protein that exhibits prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); allergic asthma (ortholog); Alzheimer's disease (ortholog); FOUND IN neuron projection terminus (ortholog); neuronal cell body (ortholog); nuclear membrane (ortholog) NW_004955426 24997811 25010822 + 102024139 AGCD01026701;GBDF01055599;XM_005386240 XP_005386297 MODEL 8723178 ncrna LOC102004029 uncharacterized LOC102004029 NW_004955451 12567051 12574581 - 102004029 AGCD01043406;AGCD01043407;AGCD01043408;GBDF01043422;XR_001235955 MODEL 8927331 protein-coding Ppih peptidylprolyl isomerase H ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN positive regulation of viral genome replication (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); U4/U6 snRNP (ortholog) NW_004955537 2211566 2229444 + 102010198 AGCD01070919;GBDF01086103;XM_005410598 XP_005410655 MODEL 9028704 protein-coding LOC102005458 zinc finger protein 793 NW_004955468 1948677 2003834 + 102005458 AGCD01051789;AGCD01051790;AGCD01051791;AGCD01051792;AGCD01051793;GBDF01306191;XM_005399907;XM_005399908;XM_005399911;XM_013522326;XM_013522327;XM_013522328 XP_005399964;XP_005399965;XP_005399968;XP_013377780;XP_013377781;XP_013377782 MODEL 9004993 protein-coding LOC102019781 solute carrier family 22 member 17 NW_004955409 36988460 36990937 + 102019781 AGCD01010486;XM_013510429 XP_013365883 MODEL 9029465 ncrna LOC102010821 uncharacterized LOC102010821 NW_004955505 3545137 3556925 + 102010821 AGCD01065031;GBBH01131759;XR_264306 MODEL 8892284 protein-coding LOC102019420 vomeronasal type-1 receptor 90-like NW_004955429 12493906 12494835 - 102019420 AGCD01028722;XM_005387252 XP_005387309 MODEL 39133331 snrna U4 U4 spliceosomal RNA 8737061 protein-coding Setd4 SET domain containing 4 ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); histone H3K4 monomethyltransferase activity (ortholog); histone H4K20 methyltransferase activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of inflammatory response (ortholog); positive regulation of interleukin-6 production (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955407 35215247 35239488 - 102004560 AGCD01007732;AGCD01007733;GBCE01108284;XM_005375712;XM_005375720;XM_013504516;XM_013504518;XM_013504520;XM_013504521;XM_013504526;XM_013504535;XM_013504538 XP_005375769;XP_005375777;XP_013359970;XP_013359972;XP_013359974;XP_013359975;XP_013359980;XP_013359989;XP_013359992 MODEL 8786878 protein-coding Tppp2 tubulin polymerization promoting protein family member 2 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); regulation of flagellated sperm motility (ortholog); FOUND IN cytosol (ortholog); sperm flagellum (ortholog) NW_004955550 1779405 1785385 + 102005083 AGCD01072588;GBCE01168156;GBDI01105945;XM_013508575 XP_013364029 MODEL 8731327 pseudo LOC102003005 cTAGE family member 5-like NW_004955463 249195 252486 + 102003005 AGCD01049479 MODEL 8926439 protein-coding Spata22 spermatogenesis associated 22 INVOLVED IN fertilization (ortholog); gamete generation (ortholog); homologous chromosome pairing at meiosis (ortholog); ASSOCIATED WITH Canavan disease (ortholog); Primary Ovarian Insufficiency 25 (ortholog); spermatogenic failure 96 (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog) NW_004955467 13304314 13325228 + 102023134 AGCD01051670;AGCD01051671;GBDK01096055;XM_005399726;XM_005399727 XP_005399783;XP_005399784 MODEL 8728817 pseudo LOC102007307 40S ribosomal protein S25-like NW_004955408 19623818 19624387 - 102007307 AGCD01008529 MODEL 8884861 ncrna LOC102018207 uncharacterized LOC102018207 NW_004955508 4313935 4333410 - 102018207 AGCD01065865;AGCD01065866;GBDJ01266761;XR_001231653 MODEL 8728581 protein-coding Prelid1 PRELI domain containing 1 ENCODES a protein that exhibits phosphatidic acid transfer activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of mitochondrial membrane potential (ortholog); negative regulation of release of cytochrome c from mitochondria (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); melanoma (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955408 29551253 29554778 + 102022363 AGCD01008762;GBDJ01010771;XM_005376421;XM_005376423 XP_005376478;XP_005376480 MODEL 9022823 protein-coding Rps6kb1 ribosomal protein S6 kinase B1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN behavioral fear response (ortholog); cell migration (ortholog); cellular response to dexamethasone stimulus (ortholog); PARTICIPATES IN insulin signaling pathway; insulin-like growth factor signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Atrophy (ortholog); autosomal dominant polycystic kidney disease (ortholog); Burns (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955451 3181085 3225610 - 102012490 AGCD01043045;AGCD01043046;AGCD01043047;AGCD01043048;GBDF01045917;XM_005393978;XM_005393979;XM_013519164 XP_005394035;XP_005394036;XP_013374618 MODEL 8713180 pseudo LOC102005852 60S ribosomal protein L21 pseudogene NW_004955565 1247877 1249322 - 102005852 AGCD01074307 MODEL 8981138 protein-coding Plek pleckstrin ENCODES a protein that exhibits phosphatase activator activity (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cortical actin cytoskeleton organization (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); ruffle membrane (ortholog) NW_004955424 16494052 16524790 - 102022101 AGCD01024743;AGCD01024744;GBDK01147367;XM_005385668 XP_005385725 MODEL 8987846 protein-coding LOC102022308 olfactory receptor 18-like NW_004955495 593768 600132 - 102022308 AGCD01061641;AGCD01061642;GBDF01256202;XM_013505086 XP_013360540 MODEL 730469386 misc_rna RMST_10 Rhabdomyosarcoma 2 associated transcript conserved region 10 8856628 protein-coding Rbm44 RNA binding motif protein 44 ENCODES a protein that exhibits protein homodimerization activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); intercellular bridge (ortholog) NW_004955542 2573648 2620240 - 102030570 AGCD01071526;AGCD01071527;GBDF01048408;XM_005411204;XM_005411205;XM_013508022 XP_005411261;XP_005411262;XP_013363476 MODEL 8780199 protein-coding Tiam2 TIAM Rac1 associated GEF 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) NW_004955439 6942702 7147145 - 102019737 AGCD01035762;AGCD01035763;GBDJ01185825;XM_005390545;XM_005390546;XM_005390547;XM_013517329;XM_013517330 XP_005390602;XP_005390603;XP_005390604;XP_013372783;XP_013372784 MODEL 8747064 protein-coding Robo4 roundabout guidance receptor 4 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); establishment of endothelial barrier (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aortic valve disease 3 (ortholog); autistic disorder (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955412 25954906 25967707 - 102016144 AGCD01013180;GBDK01075226;XM_013511214;XM_013511216;XR_001232921 XP_013366668;XP_013366670 MODEL 8826532 protein-coding LOC102008111 UPF0547 protein C16orf87 NW_004955420 26793782 26794800 + 102008111 AGCD01021432;XM_005383473 XP_005383530 MODEL 8982356 protein-coding Rfxank regulatory factor X associated ankyrin containing protein ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); Ras protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); disease by infectious agent (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955524 2635358 2642206 - 102009536 AGCD01068827;GBDK01070389;XM_005409620;XM_005409621;XM_013507211;XM_013507212;XM_013507214 XP_005409677;XP_005409678;XP_013362665;XP_013362666;XP_013362668 MODEL 8840768 protein-coding Btg2 BTG anti-proliferation factor 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); associative learning (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); brain ischemia (ortholog); breast cancer (ortholog) NW_004955406 39303221 39307308 + 102011732 AGCD01006625;GBCE01078173;XM_005375265 XP_005375322 MODEL 730469358 snorna SNORA30 Small nucleolar RNA SNORA30/SNORA37 family 9016035 protein-coding Sptssb serine palmitoyltransferase small subunit B ENCODES a protein that exhibits serine C-palmitoyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); endoplasmic reticulum organization (ortholog); sphingolipid biosynthetic process (ortholog); FOUND IN serine palmitoyltransferase complex (ortholog) NW_004955448 11756766 11791418 - 102008362 AGCD01041532;AGCD01041533;GBBH01051733;GBCQ01139807;XM_005393134 XP_005393191 MODEL 8787664 ncrna LOC102006194 uncharacterized LOC102006194 NW_004956032 1817 5572 + 102006194 AGCD01078914;GBBH01223549;XR_265202 MODEL 9048400 protein-coding Trmt10b tRNA methyltransferase 10B ENCODES a protein that exhibits tRNA (guanosine(9)-N1)-methyltransferase activity (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) NW_004955419 28693509 28720006 - 102004072 AGCD01020473;GBDI01353475;XM_005382868;XM_005382869;XM_005382870;XM_005382871;XM_005382872;XM_013513181;XM_013513182 XP_005382925;XP_005382926;XP_005382927;XP_005382928;XP_005382929;XP_013368635;XP_013368636 MODEL 8876659 protein-coding LOC102016277 ubiquitin carboxyl-terminal hydrolase 17-like protein 6 NW_004955487 138278 141472 - 102016277 AGCD01059208;XM_013504334 XP_013359788 MODEL 8777040 pseudo LOC102011616 transcription termination factor 2 pseudogene NW_004955403 54518608 54521373 - 102011616 AGCD01003099 MODEL 8820675 protein-coding Sntn sentan, cilia apical structure protein ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cilium (ortholog) NW_004955517 2210700 2233760 - 102023184 AGCD01067619;AGCD01067620;AGCD01067621;AGCD01067622;GBBH01031963;XM_013506948 XP_013362402 MODEL 39132917 snrna U1 U1 spliceosomal RNA 8993491 ncrna LOC102010017 uncharacterized LOC102010017 NW_004955451 14756261 14759461 - 102010017 AGCD01043570;GBDK01285033;XR_262608 MODEL 10253491 ncrna LOC106150323 uncharacterized LOC106150323 NW_004955472 1421389 1431550 - 106150323 AGCD01053390;XR_001237064 MODEL 8873618 pseudo LOC102008491 60S ribosomal protein L24 pseudogene NW_004955403 25635577 25636027 + 102008491 AGCD01002291 MODEL 8963693 protein-coding LOC102022310 uncharacterized LOC102022310 NW_004955426 23903866 23906254 + 102022310 AGCD01026659;GBCE01080087;XM_005386239;XR_001234325 XP_005386296 MODEL 8908983 protein-coding Pik3r5 phosphoinositide-3-kinase regulatory subunit 5 ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase regulator activity (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); phosphatidylinositol metabolic process (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); ataxia-oculomotor apraxia 3 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955467 8025231 8091406 + 102011751 AGCD01051442;AGCD01051443;AGCD01051444;GBCE01163276;XM_005399388;XM_013522206;XM_013522207;XM_013522208;XM_013522209 XP_005399445;XP_013377660;XP_013377661;XP_013377662;XP_013377663 MODEL 8931334 protein-coding Podxl2 podocalyxin like 2 INVOLVED IN leukocyte tethering or rolling (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955429 15968877 15995617 - 102028778 AGCD01028824;GBCE01187822;XM_013515485 XP_013370939 MODEL 8952687 ncrna LOC102008867 uncharacterized LOC102008867 NW_004955494 7040036 7040325 - 102008867 AGCD01061545;GBDF01288756;XR_264117 MODEL 9063294 protein-coding LOC102019422 pancreatic triacylglycerol lipase-like NW_004955431 21351823 21373520 + 102019422 AGCD01030496;XM_005387907 XP_005387964 MODEL 8869360 protein-coding Prrt1 proline rich transmembrane protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor regulator activity (ortholog); INVOLVED IN intracellular protein localization (ortholog); learning or memory (ortholog); long-term synaptic depression (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic density membrane (ortholog) NW_004955437 614026 615177 - 102006074 AGCD01034151;GBBH01219008;XM_013516938 XP_013372392 MODEL 8935649 protein-coding LOC102006195 geranylgeranyl transferase type-2 subunit alpha-like NW_004957120 9 1764 + 102006195 AGCD01080516;GBBH01089051;GBCE01054026;XM_005415225 XP_005415282 MODEL 8742057 protein-coding LOC102007312 estradiol 17 beta-dehydrogenase 5-like NW_004955463 77186 79987 - 102007312 AGCD01049471;GBDJ01183249;XM_005398329 XP_005398386 MODEL 126903055 snorna SNORA5 Small nucleolar RNA SNORA5 8931860 protein-coding Epc1 enhancer of polycomb homolog 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); enzyme-substrate adaptor activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression, epigenetic (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); NuA4 histone acetyltransferase complex (ortholog); nuclear body (ortholog) NW_004955429 23819261 23910279 - 102005825 AGCD01029081;AGCD01029082;AGCD01029083;GBCE01136615;XM_005387225;XM_013515434 XP_005387282;XP_013370888 MODEL 39132842 snorna SNORA73 Small nucleolar RNA SNORA73 family 8702337 protein-coding Pgp phosphoglycolate phosphatase ENCODES a protein that exhibits ADP phosphatase activity (ortholog); magnesium ion binding (ortholog); phosphoglycolate phosphatase activity (ortholog); INVOLVED IN glycerol biosynthetic process (ortholog); glycerophospholipid metabolic process (ortholog); negative regulation of gluconeogenesis (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog) NW_004955442 15051149 15053123 + 102011702 AGCD01037855;AGCD01037856;GBBH01186797;GBDF01006244;XM_013517733 XP_013373187 MODEL 730468996 misc_rna RMST_2 Rhabdomyosarcoma 2 associated transcript conserved region 2 8734707 protein-coding Ptges prostaglandin E synthase ENCODES a protein that exhibits glutathione binding (ortholog); glutathione peroxidase activity (ortholog); glutathione transferase activity (ortholog); INVOLVED IN cellular response to resveratrol (ortholog); chronic inflammatory response (ortholog); cyclooxygenase pathway (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Barrett's esophagus (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955445 10053745 10056981 + 102028350 AGCD01039640;XM_005392576 XP_005392633 MODEL 8967272 ncrna LOC102004791 uncharacterized LOC102004791 NW_004955411 1297405 1299563 + 102004791 AGCD01011476;GBDF01076094;XR_001232844;XR_259909 MODEL 9035097 protein-coding LOC102004030 prolactin-like NW_004955990 1149 6207 - 102004030 AGCD01078817;AGCD01078818;AGCD01078819;XM_005415158 XP_005415215 MODEL 9038826 protein-coding Ticam1 toll like receptor adaptor molecule 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein kinase binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to oxidised low-density lipoprotein particle stimulus (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH amblyopia (ortholog); Anisocoria (ortholog); brain disease (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955495 4197083 4204999 + 102004084 AGCD01061902;GBDI01013112;XM_005405780;XM_005405782 XP_005405837;XP_005405839 MODEL 10149400 pseudo LOC106147424 60S ribosomal protein L21 pseudogene NW_004955408 13204104 13206419 - 106147424 AGCD01008350 MODEL 9065896 pseudo LOC102008112 amyloid beta A4 precursor protein-binding family B member 2-like NW_004955488 9036407 9057644 + 102008112 AGCD01059741;AGCD01059742;AGCD01059743 MODEL 8834985 protein-coding Ppil1 peptidylprolyl isomerase like 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); INVOLVED IN embryonic brain development (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955437 6131013 6143474 + 102024382 AGCD01034418;AGCD01034419;AGCD01034420;GBBH01121509;XM_005389635 XP_005389692 MODEL 8986111 protein-coding LOC102010825 olfactory receptor 4D6 NW_004955511 3967106 3968050 + 102010825 AGCD01066484;XM_005408062 XP_005408119 MODEL 8867423 pseudo LOC102019782 heterogeneous nuclear ribonucleoprotein A3 pseudogene NW_004955462 2855640 2858078 - 102019782 AGCD01049188 MODEL 730469584 snorna SNORA17 Small nucleolar RNA SNORA17 8844207 protein-coding Rala RAS like proto-oncogene A ENCODES a protein that exhibits ATPase binding (ortholog); Edg-2 lysophosphatidic acid receptor binding (ortholog); GDP binding (ortholog); INVOLVED IN membrane raft localization (ortholog); neural tube closure (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); genetic disease (ortholog); HIATT-NEU-COOPER NEURODEVELOPMENTAL SYNDROME (ortholog); FOUND IN cell surface (ortholog); cleavage furrow (ortholog); endocytic vesicle (ortholog) NW_004955460 3789136 3853315 - 102018164 AGCD01048422;GBDF01124362;XM_005397729;XM_005397730;XR_263026 XP_005397786;XP_005397787 MODEL 8965720 protein-coding Wasf3 WASP family member 3 INVOLVED IN lamellipodium assembly (ortholog); modification of postsynaptic actin cytoskeleton (ortholog); oligodendrocyte development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN glutamatergic synapse (ortholog); lamellipodium (ortholog); postsynapse (ortholog) NW_004955497 6100633 6190639 + 102028556 AGCD01062622;AGCD01062623;AGCD01062624;AGCD01062625;AGCD01062626;GBDF01158437;XM_005406347;XM_005406348;XM_005406349;XM_005406350 XP_005406404;XP_005406405;XP_005406406;XP_005406407 MODEL 8913259 protein-coding Tppp3 tubulin polymerization promoting protein family member 3 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN decidualization (ortholog); embryo implantation (ortholog); microtubule bundle formation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); microtubule bundle (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955484 9246734 9250293 + 102005264 AGCD01058413;GBDK01012917;XM_005403658 XP_005403715 MODEL 8741730 protein-coding Spata24 spermatogenesis associated 24 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH uterine carcinosarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955418 1157089 1163897 + 102018929 AGCD01018711;GBDJ01131117;XM_005382072 XP_005382129 MODEL 626189176 snorna SNORD45 Small nucleolar RNA SNORD45 8866396 protein-coding LOC102013215 olfactory receptor 12-like NW_004955542 1185898 1186848 - 102013215 AGCD01071490;XM_005411242 XP_005411299 MODEL 8865927 protein-coding Rps6kb2 ribosomal protein S6 kinase B2 ENCODES a protein that exhibits ATP binding (ortholog); peptide binding (ortholog); protein kinase activity (ortholog); INVOLVED IN negative regulation of insulin receptor signaling pathway (ortholog); positive regulation of translational initiation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955422 18043785 18050406 - 102018937 AGCD01022936;GBCQ01065372;XM_005384331 XP_005384388 MODEL 8763029 protein-coding Plek2 pleckstrin 2 ENCODES a protein that exhibits phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); erythrocyte enucleation (ortholog); positive regulation of cell projection organization (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955466 2818004 2836688 + 102016362 AGCD01050765;AGCD01050766;AGCD01050767;AGCD01050768;GBDF01147329;XM_005399083 XP_005399140 MODEL 8898079 pseudo LOC102011619 60S ribosomal protein L6-like NW_004955405 15379752 15381035 + 102011619 AGCD01004944 MODEL 8902042 protein-coding Slc30a3 solute carrier family 30 member 3 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN positive regulation of transport (ortholog); zinc ion import into lysosome (ortholog); zinc ion import into synaptic vesicle (ortholog); ASSOCIATED WITH Febrile Seizures (ortholog); high grade glioma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN clathrin-sculpted vesicle (ortholog); cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955469 9235159 9254291 - 102025675 AGCD01052497;AGCD01052498;GBDF01003772;XM_005400475;XM_005400476;XM_005400477;XM_013522596;XM_013522597;XM_013522598 XP_005400532;XP_005400533;XP_005400534;XP_013378050;XP_013378051;XP_013378052 MODEL 126903046 protein-coding RBM46 RNA binding motif protein 46 8919708 protein-coding LOC102012027 uncharacterized LOC102012027 NW_004955438 16193937 16196191 - 102012027 AGCD01035397;GBDI01015943;XM_013517279 XP_013372733 MODEL 8953683 protein-coding LOC102011194 cytochrome c oxidase assembly factor 4 homolog, mitochondrial ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955414 17658281 17661867 + 102011194 AGCD01015247;AGCD01015248;GBDF01220602;XM_005379932 XP_005379989 MODEL 8928197 protein-coding Rock1 Rho associated coiled-coil containing protein kinase 1 ENCODES a protein that exhibits protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); Rho-dependent protein serine/threonine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); aortic valve morphogenesis (ortholog); apical constriction (ortholog); PARTICIPATES IN E-cadherin signaling pathway; eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytoskeleton (ortholog) NW_004955402 9752101 9864317 - 102026372 AGCD01000231;AGCD01000232;GBCE01172237;GBDJ01274594;XM_005372684 XP_005372741 MODEL 9015758 protein-coding Rfxap regulatory factor X associated protein ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH hepatic fibrosis (ortholog); liver cirrhosis (ortholog); MHC class II deficiency (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955431 9200006 9209588 - 102014933 AGCD01030160;AGCD01030161;GBCB01034736;GBDJ01029212;XM_013515899 XP_013371353 MODEL 8755021 pseudo LOC102022311 uncharacterized LOC102022311 NW_004955427 19170551 19172121 + 102022311 AGCD01027359 MODEL 39133333 snrna U4 U4 spliceosomal RNA 730469370 snorna SNORA31 Small nucleolar RNA SNORA31 8821803 ncrna LOC102008117 uncharacterized LOC102008117 NW_004955493 654340 655511 - 102008117 AGCD01060859;GBDK01039914;XR_264062 MODEL 8827805 protein-coding LOC102003007 vomeronasal type-1 receptor 4-like NW_004955465 13056058 13056990 - 102003007 AGCD01050581;XM_005399004 XP_005399061 MODEL 8831905 protein-coding Setd5 SET domain containing 5 ENCODES a protein that exhibits histone H3 methyltransferase activity (ortholog); histone H3K36 methyltransferase activity (ortholog); histone H3K36 trimethyltransferase activity (ortholog); INVOLVED IN cognition (ortholog); negative regulation of transcription by RNA polymerase III (ortholog); regulation of chromatin organization (ortholog); ASSOCIATED WITH anemia (ortholog); ankyloglossia (ortholog); anxiety disorder (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); euchromatin (ortholog) NW_004955561 968814 1091687 + 102029235 AGCD01073827;AGCD01073828;AGCD01073829;AGCD01073830;AGCD01073831;GBDJ01090978;XM_005413006;XM_005413007;XM_005413008;XM_005413009;XM_005413010;XM_005413012;XM_005413013;XM_005413014;XM_005413015;XM_013509075;XM_013509076;XM_013509077;XM_013509078 XP_005413063;XP_005413064;XP_005413065;XP_005413066;XP_005413067;XP_005413069;XP_005413070;XP_005413071;XP_005413072;XP_013364529;XP_013364530;XP_013364531;XP_013364532 MODEL 8744412 protein-coding LOC102018211 WD repeat-containing protein 49-like NW_004955431 14732986 14816717 - 102018211 AGCD01030338;AGCD01030339;AGCD01030340;AGCD01030341;GBDF01022038;XM_013515901 XP_013371355 MODEL 8838738 protein-coding Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit ENCODES a protein that exhibits identical protein binding (ortholog); tRNA (adenine(9)-N1)-methyltransferase activity (ortholog); tRNA (guanosine(9)-N1)-methyltransferase activity (ortholog); INVOLVED IN mitochondrial RNA 5'-end processing (ortholog); mitochondrial tRNA 3'-end processing (ortholog); mitochondrial tRNA 5'-end processing (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 30 (ortholog); Developmental Disabilities (ortholog); Fatigue (ortholog); FOUND IN catalytic complex (ortholog); endoribonuclease complex (ortholog); mitochondrial matrix (ortholog) NW_004955427 3133225 3137070 + 102028659 AGCD01026918;GBCB01042255;XM_005386322;XM_005386323;XM_013515081 XP_005386379;XP_005386380;XP_013370535 MODEL 8809440 protein-coding Prelid2 PRELI domain containing 2 ASSOCIATED WITH cholangiocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); Hereditary Neoplastic Syndromes (ortholog) NW_004955415 8259707 8342179 + 102020658 AGCD01016070;AGCD01016071;AGCD01016072;AGCD01016073;GBDK01286329;XM_005380687 XP_005380744 MODEL 8757519 ncrna LOC102016279 uncharacterized LOC102016279 NW_004955422 11711943 11726590 - 102016279 AGCD01022765;GBDF01180653;XR_260867 MODEL 9057733 protein-coding LOC102005856 cytochrome P450 3A9-like NW_004955573 976002 1018678 - 102005856 AGCD01075011;AGCD01075012;AGCD01075013;GBCQ01036396;XM_005413764;XM_013509445 XP_005413821;XP_013364899 MODEL 8875735 protein-coding Sec23a SEC23 homolog A, COPII component ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN COPII-coated vesicle cargo loading (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN COPII vesicle coat (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); cytosol (ortholog) NW_004955409 22192549 22243090 + 102016984 AGCD01010029;AGCD01010030;AGCD01010031;AGCD01010032;GBCQ01097019;GBDJ01316545;XM_013510357 XP_013365811 MODEL 39131816 snrna U1 U1 spliceosomal RNA 9023522 protein-coding Pgpep1 pyroglutamyl-peptidase I ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955524 3138393 3148321 - 102010515 AGCD01068859;GBDF01083374;GBDK01021696;XM_013507332 XP_013362786 MODEL 39132940 snorna SNORA74 Small nucleolar RNA SNORA74 9040895 protein-coding LOC102005462 chromosome unknown open reading frame, human C19orf53 ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955415 32590287 32592465 + 102005462 AGCD01016726;GBDI01013906;XM_005381066 XP_005381123 MODEL 9020705 ncrna LOC102008492 uncharacterized LOC102008492 NW_004955405 32452517 32475010 - 102008492 AGCD01005333;GBDJ01347641;XR_259420 MODEL 8903690 protein-coding Snu13 small nuclear ribonucleoprotein 13 ENCODES a protein that exhibits ATPase binding (ortholog); box C/D sno(s)RNA binding (ortholog); snoRNA binding (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog); mRNA splicing, via spliceosome (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN box C/D methylation guide snoRNP complex (ortholog); dense fibrillar component (ortholog); nucleolus (ortholog) NW_004955413 27160985 27172648 - 102023018 AGCD01014496;AGCD01014497;GBDF01002032;XM_005379365 XP_005379422 MODEL 9009728 protein-coding Pik3r6 phosphoinositide-3-kinase regulatory subunit 6 ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase regulator activity (ortholog); 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of T cell differentiation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; insulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); phosphatidylinositol 3-kinase complex, class IA (ortholog) NW_004955467 8104242 8157637 + 102012079 AGCD01051444;GBCE01018656;XM_005399389;XM_005399391;XM_013522213 XP_005399446;XP_005399448;XP_013377667 MODEL 8734333 protein-coding Btg3 BTG anti-proliferation factor 3 INVOLVED IN negative regulation of mitotic cell cycle (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH cholestasis (ortholog); renal cell carcinoma (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955407 18927211 18939576 - 102012927 AGCD01007289;GBCE01095553;GBDF01047524;XM_013503870 XP_013359324 MODEL 730469585 snorna SNORA17 Small nucleolar RNA SNORA17 8823551 protein-coding Rgcc regulator of cell cycle ENCODES a protein that exhibits kinase activator activity (ortholog); protein kinase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); complement receptor mediated signaling pathway (ortholog); fibroblast activation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Myocardial Ischemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955518 4788857 4800273 - 102024839 AGCD01067838;GBBH01089561;XM_005409116 XP_005409173 MODEL 8842618 pseudo LOC102019436 60 kDa heat shock protein, mitochondrial pseudogene NW_004955439 9837307 9839540 - 102019436 AGCD01035844 MODEL 8897742 protein-coding Ppil2 peptidylprolyl isomerase like 2 ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN protein localization to plasma membrane (ortholog); protein polyubiquitination (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955442 17426154 17449079 - 102014295 AGCD01037955;GBBH01166387;XM_005391698;XM_005391699;XM_013517867;XM_013517868;XM_013517869;XM_013517870;XM_013517871;XR_001235406 XP_005391755;XP_005391756;XP_013373321;XP_013373322;XP_013373323;XP_013373324;XP_013373325 MODEL 8944232 protein-coding Spty2d1 SPT2 chromatin protein domain containing 1 ENCODES a protein that exhibits DNA binding (ortholog); histone binding (ortholog); histone chaperone activity (ortholog); INVOLVED IN heterochromatin formation (ortholog); nucleosome assembly (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); familial hypercholesterolemia (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955414 33255048 33272861 - 102024448 AGCD01015800;GBCE01167704;XM_005380424 XP_005380481 MODEL 8846351 pseudo LOC102007318 ubiquitin-conjugating enzyme E2 L3 pseudogene NW_004955412 10793664 10794367 - 102007318 AGCD01012785;XM_005378041;XM_005378042 MODEL 730468945 snorna SNORA5 Small nucleolar RNA SNORA5 8716155 protein-coding LOC102010019 phospholipase A2, membrane associated-like NW_004955452 597005 599899 - 102010019 AGCD01043819;XM_005395284 XP_005395341 MODEL 730469398 misc_rna RMST_3 Rhabdomyosarcoma 2 associated transcript conserved region 3 9005834 protein-coding Prrt1b proline rich transmembrane protein 1B NW_004955513 1218016 1221299 + 102024491 AGCD01066848;AGCD01066849;GBDF01179957;XM_005408371 XP_005408428 MODEL 8725629 protein-coding Ptges2 prostaglandin E synthase 2 ENCODES a protein that exhibits 12-hydroxyheptadecatrienoic acid synthase activity (ortholog); DNA binding (ortholog); lyase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); lipid metabolic process (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN prostaglandin biosynthetic pathway; type II interferon signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); Carbon Tetrachloride Poisoning (ortholog); FOUND IN cytosol (ortholog); Golgi membrane (ortholog); mitochondrion (ortholog) NW_004955419 608313 612813 + 102017772 AGCD01019598;GBDF01127195;XM_005382381 XP_005382438 MODEL 8986472 protein-coding Washc2c WASH complex subunit 2C ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN endocytic recycling (ortholog); negative regulation of barbed-end actin filament capping (ortholog); protein localization to endosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); endosome (ortholog) NW_004955546 2718758 2764277 - 102018987 AGCD01072099;AGCD01072100;GBDI01070765;XM_013508426;XM_013508427;XM_013508428 XP_013363880;XP_013363881;XP_013363882 MODEL 8750184 protein-coding LOC102004794 olfactory receptor 8G1-like NW_004955412 25040599 25044790 + 102004794 AGCD01013133;XM_005378413;XM_013511248 XP_005378470;XP_013366702 MODEL 9066868 protein-coding LOC102004031 uncharacterized LOC102004031 NW_004955452 2163418 2166480 - 102004031 AGCD01043879;GBDF01008884;XM_005394728;XM_005394730;XM_013519464;XM_013519465;XM_013519466;XM_013519467;XM_013519468 XP_005394785;XP_005394787;XP_013374918;XP_013374919;XP_013374920;XP_013374921;XP_013374922 MODEL 8917974 protein-coding Ticam2 toll like receptor adaptor molecule 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); phospholipid binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); defense response to virus (ortholog); negative regulation of chemokine (C-C motif) ligand 5 production (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Brain Injuries (ortholog); Coronavirus infectious disease (ortholog); severe acute respiratory syndrome (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955411 31010373 31042321 - 102003848 AGCD01012265;GBDJ01125148;XM_013510720 XP_013366174 MODEL 8756518 protein-coding Pof1b POF1B actin binding protein ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); bicellular tight junction assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN actin filament (ortholog); adherens junction (ortholog); bicellular tight junction (ortholog) NW_004955529 4137746 4224542 - 102024377 AGCD01069818;AGCD01069819;AGCD01069820;GBCC01000347;XM_005410090;XM_013507535;XM_013507536 XP_005410147;XP_013362989;XP_013362990 MODEL 10334402 ncrna LOC106147425 uncharacterized LOC106147425 NW_004955558 788014 790469 - 106147425 AGCD01073390;GBCE01126974;XR_001232324;XR_001232325 MODEL 8943035 ncrna LOC102019786 uncharacterized LOC102019786 NW_004955464 11956438 11958338 + 102019786 AGCD01050169;GBCE01074317;XR_001236679 MODEL 8798180 protein-coding Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing ENCODES a protein that exhibits 1-phosphatidylinositol-3-phosphate 5-kinase activity (ortholog); 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); 1-phosphatidylinositol-5-kinase activity (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); artery development (ortholog); PARTICIPATES IN inositol metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955457 6749226 6841855 - 102005112 AGCD01046851;AGCD01046852;AGCD01046853;AGCD01046854;GBCQ01174522;XM_005396961;XM_005396963;XM_005396964;XM_013520753;XM_013520754;XM_013520755;XM_013520756;XM_013520757;XM_013520758;XM_013520759 XP_005397018;XP_005397020;XP_005397021;XP_013376207;XP_013376208;XP_013376209;XP_013376210;XP_013376211;XP_013376212;XP_013376213 MODEL 8795159 protein-coding Epc2 enhancer of polycomb 2 INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleosome (ortholog) NW_004955440 14573960 14645171 + 102026045 AGCD01036473;GBDK01240424;XM_005390801 XP_005390858 MODEL 8786325 protein-coding Tpr translocated promoter region, nuclear basket protein ENCODES a protein that exhibits chromatin binding (ortholog); dynein complex binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cellular response to interferon-alpha (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); ASSOCIATED WITH Autosomal Recessive Intellectual Developmental Disorder 79 (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic dynein complex (ortholog); kinetochore (ortholog) NW_004955406 24742525 24805989 - 102011731 AGCD01006207;GBBH01166944;XM_005375082;XM_005375083 XP_005375139;XP_005375140 MODEL 8837505 protein-coding Setd6 SET domain containing 6, protein lysine methyltransferase ENCODES a protein that exhibits NF-kappaB binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); S-adenosyl-L-methionine binding (ortholog); INVOLVED IN regulation of inflammatory response (ortholog); stem cell differentiation (ortholog); stem cell population maintenance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955433 15934091 15937738 + 102012677 AGCD01031777;GBBH01050346;GBCQ01063968;XM_005388507 XP_005388564 MODEL 8767931 protein-coding Plekha1 pleckstrin homology domain containing A1 ENCODES a protein that exhibits PDZ domain binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); INVOLVED IN androgen metabolic process (ortholog); B cell receptor signaling pathway (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955477 659640 730394 + 102020112 AGCD01055492;AGCD01055493;AGCD01055494;GBDF01226547;XM_005401937;XM_005401939;XM_005401940;XM_005401941;XM_005401942;XM_005401943;XM_005401945;XM_013503083;XM_013503084 XP_005401994;XP_005401996;XP_005401997;XP_005401998;XP_005401999;XP_005402000;XP_005402002;XP_013358537;XP_013358538 MODEL 9027259 pseudo LOC102011620 60S ribosomal protein L27 pseudogene NW_004955452 12777543 12777937 - 102011620 AGCD01044365 MODEL 8807017 protein-coding Slc30a4 solute carrier family 30 member 4 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN lactation (ortholog); otolith development (ortholog); response to toxic substance (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endosome membrane (ortholog); late endosome (ortholog) NW_004955409 7963454 7991600 + 102024771 AGCD01009371;GBCE01097726;GBDF01000969;XM_005377147 XP_005377204 MODEL 8913532 protein-coding Rbm46 RNA binding motif protein 46 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cell cycle switching, mitotic to meiotic cell cycle (ortholog); female meiotic nuclear division (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955471 12096400 12167536 - 102016372 AGCD01053272;AGCD01053273;AGCD01053274;GBDF01049866;XM_013522862 XP_013378316 MODEL 8799087 protein-coding LOC102011197 vomeronasal type-1 receptor 90-like NW_004955414 14915467 14916408 - 102011197 AGCD01015162;XM_005380438 XP_005380495 MODEL 8921301 ncrna LOC102008122 uncharacterized LOC102008122 NW_004955423 9990855 9994777 + 102008122 AGCD01023668;GBDF01225396;XR_001234046 MODEL 8999798 protein-coding LOC102022318 olfactory receptor 4A16-like NW_004955511 116700 117623 - 102022318 AGCD01066320;XM_005408177 XP_005408234 MODEL 39133334 snrna U4 U4 spliceosomal RNA 8793086 protein-coding LOC102008868 CD70 antigen-like NW_004955495 3023146 3026631 - 102008868 AGCD01061815;GBDK01116023;XM_005405704;XM_005405705;XM_013505038;XM_013505039 XP_005405761;XP_005405762;XP_013360492;XP_013360493 MODEL 8879328 protein-coding Rock2 Rho associated coiled-coil containing protein kinase 2 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); protease binding (ortholog); protein kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); aortic valve morphogenesis (ortholog); blood vessel diameter maintenance (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955487 5856190 5972408 - 102005048 AGCD01059348;AGCD01059349;GBCQ01095057;GBDK01240898;XM_013504358;XM_013504359;XM_013504360 XP_013359812;XP_013359813;XP_013359814 MODEL 8957169 protein-coding LOC102008496 glutathione S-transferase theta-1 NW_004955455 8324748 8336051 - 102008496 AGCD01045886;AGCD01045887;GBDI01296088;XM_005396409 XP_005396466 MODEL 730469213 snorna SNORA31 Small nucleolar RNA SNORA31 8884575 pseudo LOC102003008 DPY30 domain-containing protein 2 pseudogene NW_004955413 2319331 2319955 + 102003008 AGCD01013544 MODEL 730469586 snorna SNORA17 Small nucleolar RNA SNORA17 9001004 ncrna LOC102018213 uncharacterized LOC102018213 NW_004955433 14380516 14385234 + 102018213 AGCD01031721;GBDF01051190;XR_261596 MODEL 8927970 protein-coding Prelid3a PRELI domain containing 3A ENCODES a protein that exhibits phosphatidic acid transfer activity (ortholog); INVOLVED IN phospholipid transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); thymoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955402 1016977 1027063 - 102011158 AGCD01000042;AGCD01000043;AGCD01000044;GBCE01013503;XM_005372561;XM_005372562;XM_013513802;XR_259007;XR_259008;XR_259009 XP_005372618;XP_005372619;XP_013369256 MODEL 8850870 ncrna LOC102016281 uncharacterized LOC102016281 NW_004955493 865830 871320 - 102016281 AGCD01060868;GBDJ01318375;XR_001231284;XR_001231285;XR_264071;XR_264072 MODEL 8929422 protein-coding Rps6kc1 ribosomal protein S6 kinase C1 ENCODES a protein that exhibits protein kinase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955406 4382931 4542926 - 102014207 AGCD01005687;AGCD01005688;AGCD01005689;AGCD01005690;GBDJ01420240;XM_005374724;XM_005374726;XM_005374727;XM_013520007;XM_013520009 XP_005374781;XP_005374783;XP_005374784;XP_013375461;XP_013375463 MODEL 8767657 pseudo LOC102005858 40S ribosomal protein S4-like NW_004955575 415119 417705 + 102005858 AGCD01075221 MODEL 8743051 protein-coding Setd7 SET domain containing 7, histone lysine methyltransferase ENCODES a protein that exhibits chromatin binding (ortholog); histone H3 methyltransferase activity (ortholog); histone H3K4 monomethyltransferase activity (ortholog); INVOLVED IN chromatin organization (ortholog); DNA damage response (ortholog); heterochromatin organization (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); cognitive disorder (ortholog); extrahepatic cholestasis (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955428 4131431 4178250 + 102017588 AGCD01027667;AGCD01027668;GBCE01001559;XM_005386687 XP_005386744 MODEL 8929594 protein-coding Spx spexin hormone ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); type 2 galanin receptor binding (ortholog); type 3 galanin receptor binding (ortholog); INVOLVED IN long-chain fatty acid import into cell (ortholog); negative regulation of appetite (ortholog); negative regulation of heart rate (ortholog); ASSOCIATED WITH colitis (ortholog); Edema (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); dense core granule (ortholog); extracellular region (ortholog) NW_004955413 17173215 17178388 + 102018073 AGCD01014131;GBDJ01257021;XM_005379061 XP_005379118 MODEL 730469407 snorna SNORA5 Small nucleolar RNA SNORA5 8830696 pseudo LOC102012028 pre-mRNA 3' end processing protein WDR33 pseudogene NW_004955439 20471999 20472958 - 102012028 AGCD01036114 MODEL 39132942 snorna SNORA74 Small nucleolar RNA SNORA74 8885611 protein-coding LOC102010827 olfactory receptor 10V1 NW_004955511 4140948 4141914 - 102010827 AGCD01066493;XM_005408271 XP_005408328 MODEL 8958562 protein-coding Ptges3 prostaglandin E synthase 3 ENCODES a protein that exhibits DNA polymerase binding (ortholog); enzyme binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN cell population proliferation (ortholog); chaperone-mediated protein complex assembly (ortholog); cyclooxygenase pathway (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); autism spectrum disorder (ortholog); breast cancer (ortholog); FOUND IN actin filament (ortholog); cytosol (ortholog); neuronal cell body (ortholog) NW_004955458 4203075 4209967 - 102013802 AGCD01047385;GBDI01002083;GBDJ01074687;XM_005397329 XP_005397386 MODEL 8840785 protein-coding LOC102013216 uncharacterized LOC102013216 NW_004955438 14271926 14297748 + 102013216 AGCD01035336;AGCD01035337;GBDF01294416;XM_005390442 XP_005390499 MODEL 8906494 protein-coding Ralb RAS like proto-oncogene B ENCODES a protein that exhibits ATPase binding (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN positive regulation of autophagosome assembly (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); positive regulation of innate immune response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN midbody (ortholog); plasma membrane (ortholog) NW_004955459 9533081 9574464 - 102016136 AGCD01048159;AGCD01048160;AGCD01048161;GBDI01080246;XM_005397650;XM_005397651 XP_005397707;XP_005397708 MODEL 8957836 ncrna LOC102006201 uncharacterized LOC102006201 NW_004955452 2332910 2343134 + 102006201 AGCD01043890;GBDF01181028;XR_262638;XR_262639 MODEL 626189160 snorna SNORD46 Small nucleolar RNA SNORD46 8875385 protein-coding Trmt11 tRNA methyltransferase 11 ENCODES a protein that exhibits tRNA (guanine(10)-N2)-methyltransferase activity (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); methyltransferase complex (ortholog); mitochondrion (ortholog) NW_004955436 7274848 7318762 + 102004850 AGCD01033704;GBDI01353599;XM_005389162;XM_005389163;XM_013516690 XP_005389219;XP_005389220;XP_013372144 MODEL 8886867 protein-coding Spata25 spermatogenesis associated 25 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955445 11408552 11409730 + 102026364 AGCD01039690;GBDF01005574;XM_005392403 XP_005392460 MODEL 8816780 ncrna LOC102019438 uncharacterized LOC102019438 NW_004955441 14696516 14714360 + 102019438 AGCD01037214;AGCD01037215;AGCD01037216;GBDF01130381;XR_262081 MODEL 8826377 protein-coding Pgpep1l pyroglutamyl-peptidase I like ASSOCIATED WITH uterine carcinosarcoma (ortholog) NW_004955416 26069466 26094419 + 102029621 AGCD01017594;GBCE01023023;XM_005381617;XM_013512514 XP_005381674;XP_013367968 MODEL 8967512 protein-coding Btg4 BTG anti-proliferation factor 4 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN maternal-to-zygotic transition of gene expression (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 8 (ortholog) NW_004955412 13137273 13250261 - 102013397 AGCD01012829;GBBH01185406;XM_005378059;XM_013511008;XM_013511009;XM_013511010;XM_013511011;XM_013511012;XM_013511014;XM_013511015;XM_013511016 XP_005378116;XP_013366462;XP_013366463;XP_013366464;XP_013366465;XP_013366466;XP_013366468;XP_013366469;XP_013366470 MODEL 10222055 ncrna LOC106150324 uncharacterized LOC106150324 NW_004955472 8050630 8054790 + 106150324 AGCD01053637;GBBH01048292;XR_001237065 MODEL 8727192 protein-coding Ppil3 peptidylprolyl isomerase like 3 PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colorectal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog) NW_004955403 640956 648498 + 102029462 AGCD01001700;GBCQ01038792;XM_005373232;XM_005373233;XM_005373234;XM_005373235 XP_005373289;XP_005373290;XP_005373291;XP_005373292 MODEL 39131822 snrna U1 U1 spliceosomal RNA 8791092 ncrna LOC102010020 uncharacterized LOC102010020 NW_004955453 14159202 14163339 + 102010020 AGCD01044858;GBDF01249804;XR_001236190;XR_262732 MODEL 8751626 pseudo LOC102005464 KATNB1-like protein 1 NW_004955415 14290724 14297874 + 102005464 AGCD01016295 MODEL 8847745 protein-coding Snupn snurportin 1 INVOLVED IN cytoskeleton organization (ortholog); protein complex oligomerization (ortholog); protein tetramerization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 29 (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NLS-dependent protein nuclear import complex (ortholog) NW_004955450 2701496 2720971 + 102026376 AGCD01042395;AGCD01042396;AGCD01042397;AGCD01042398;GBDF01083761;XM_005393503;XM_005393504;XM_013519045 XP_005393560;XP_005393561;XP_013374499 MODEL 8980539 ncrna LOC102004039 uncharacterized LOC102004039 NW_004955407 34849285 34853966 + 102004039 AGCD01007727;GBDF01120859;XR_001231203 MODEL 8854107 protein-coding Rgl1 ral guanine nucleotide dissociation stimulator like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955406 22419137 22670537 + 102027940 AGCD01006158;AGCD01006159;AGCD01006160;GBDF01090295;XM_005375043;XM_005375044;XM_005375045;XM_005375046 XP_005375100;XP_005375101;XP_005375102;XP_005375103 MODEL 8888036 protein-coding Pofut1 protein O-fucosyltransferase 1 ENCODES a protein that exhibits peptide-O-fucosyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); heart development (ortholog); nervous system development (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); Dowling-Degos disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955422 28809901 28833186 - 102010377 AGCD01023370;AGCD01023371;GBCQ01062176;XM_005384876 XP_005384933 MODEL 730469469 snorna SNORA31 Small nucleolar RNA SNORA31 39131418 protein-coding WASHC3 WASH complex subunit 3 9064300 ncrna LOC102007320 uncharacterized LOC102007320 NW_004955413 65629 71480 + 102007320 AGCD01013436;XR_260039 MODEL 8770844 protein-coding Tpra1 transmembrane protein adipocyte associated 1 INVOLVED IN embryonic cleavage (ortholog); negative regulation of mitotic cell cycle phase transition (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955429 16032247 16041793 + 102029771 AGCD01028826;GBBH01192980;XM_005387055;XM_005387056;XM_013515540 XP_005387112;XP_005387113;XP_013370994 MODEL 8893173 protein-coding Epcam epithelial cell adhesion molecule ENCODES a protein that exhibits cadherin binding involved in cell-cell adhesion (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of cell-cell adhesion mediated by cadherin (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955441 14155084 14167584 + 102018032 AGCD01037179;AGCD01037180;AGCD01037181;AGCD01037182;GBCE01007173;GBCQ01011851;XM_013517611 XP_013373065 MODEL 730469187 misc_rna RMST_4 Rhabdomyosarcoma 2 associated transcript conserved region 4 8887171 pseudo LOC102016284 protein AF1q-like NW_004955493 6300422 6301768 + 102016284 AGCD01061086 MODEL 8719809 protein-coding Prrt2 proline rich transmembrane protein 2 ENCODES a protein that exhibits SH3 domain binding (ortholog); INVOLVED IN negative regulation of short-term synaptic potentiation (ortholog); negative regulation of SNARE complex assembly (ortholog); neuromuscular process controlling posture (ortholog); ASSOCIATED WITH benign familial infantile seizures 2 (ortholog); cerebrotendinous xanthomatosis (ortholog); epilepsy (ortholog); FOUND IN axon terminus (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955493 7144389 7148613 - 102008740 AGCD01061156;GBCC01002602;XM_013504775;XM_013504776;XM_013504777;XM_013504778 XP_013360229;XP_013360230;XP_013360231;XP_013360232 MODEL 8929206 protein-coding LOC102005859 RE1-silencing transcription factor NW_004955447 14183770 14196122 - 102005859 AGCD01040989;GBBH01193455;GBCE01108856;XM_013518551 XP_013374005 MODEL 730469504 snorna SNORA5 Small nucleolar RNA SNORA5 8908039 protein-coding Plekha2 pleckstrin homology domain containing A2 ENCODES a protein that exhibits fibronectin binding (ortholog); laminin binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN positive regulation of cell-matrix adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); protein-containing complex (ortholog) NW_004955463 14462875 14525174 + 102027500 AGCD01049910;AGCD01049911;GBCE01011414;XM_005398458;XM_005398460;XM_005398461;XM_013521516;XM_013521517 XP_005398515;XP_005398517;XP_005398518;XP_013376970;XP_013376971 MODEL 8753405 pseudo LOC102008123 protein S100-A10 pseudogene NW_004955495 7868008 7869132 - 102008123 AGCD01062169 MODEL 8868196 pseudo LOC102022321 heterogeneous nuclear ribonucleoprotein C pseudogene NW_004955521 3730039 3730772 - 102022321 AGCD01068241 MODEL 8904318 protein-coding Ticrr TOPBP1 interacting checkpoint and replication regulator ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN regulation of DNA-templated DNA replication initiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955416 15572789 15615556 - 102027971 AGCD01017335;AGCD01017336;GBDF01278969;XM_005381551;XM_013512555;XM_013512556 XP_005381608;XP_013368009;XP_013368010 MODEL 8975398 protein-coding Slc30a5 solute carrier family 30 member 5 ENCODES a protein that exhibits cadmium ion transmembrane transporter activity (ortholog); zinc efflux transmembrane transporter activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN cobalt ion transport (ortholog); GPI anchor biosynthetic process (ortholog); intracellular zinc ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bradycardia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955446 158843 196275 - 102009893 AGCD01039930;AGCD01039931;GBBH01087914;XM_005392594;XM_013518421 XP_005392651;XP_013373875 MODEL 8784216 ncrna LOC102008869 uncharacterized LOC102008869 NW_004955423 21824204 21851556 + 102008869 AGCD01023949;GBCQ01142430;XR_260986 MODEL 9049919 protein-coding Prelid3b PRELI domain containing 3B ENCODES a protein that exhibits phosphatidylserine transfer activity (ortholog); INVOLVED IN intermembrane phospholipid transfer (ortholog); mitochondrial membrane organization (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955445 552634 563324 + 102017610 AGCD01039319;GBDF01054211;XM_005392207;XM_005392208;XM_005392209 XP_005392264;XP_005392265;XP_005392266 MODEL 8699552 pseudo LOC102004795 zinc finger CCCH domain-containing protein 14-like NW_004955466 12129671 12131134 - 102004795 AGCD01051113 MODEL 8724600 protein-coding LOC102008498 interferon-induced GTP-binding protein Mx2-like NW_004955407 35275551 35296838 - 102008498 AGCD01007736;GBBH01139527;XM_005375727;XM_013504510 XP_005375784;XP_013359964 MODEL 8941921 protein-coding Pilra paired immunoglobin like type 2 receptor alpha ENCODES a protein that exhibits CD8 receptor binding (ortholog); INVOLVED IN signal transduction (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); clear cell renal cell carcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955573 553631 560301 - 102024516 AGCD01074991;GBDF01110644;GBDK01074242;XM_013509477 XP_013364931 MODEL 10155974 ncrna LOC106147426 uncharacterized LOC106147426 NW_004955558 798091 805169 - 106147426 AGCD01073391;AGCD01073392;XR_001232326 MODEL 8776857 ncrna LOC102003012 uncharacterized LOC102003012 NW_004955470 10615968 10634986 + 102003012 AGCD01052872;GBDF01190714;XR_263493 MODEL 730469588 snorna SNORA17 Small nucleolar RNA SNORA17 8751893 protein-coding LOC102019440 olfactory receptor 4L1-like NW_004955550 183997 184935 + 102019440 AGCD01072485;XM_005412127 XP_005412184 MODEL 8800620 pseudo LOC102011623 60S ribosomal protein L21 pseudogene NW_004955453 11145197 11145736 + 102011623 AGCD01044801 MODEL 9043830 ncrna LOC102012030 uncharacterized LOC102012030 NW_004955442 16080957 16097609 + 102012030 AGCD01037891;GBDF01225468;XR_262160;XR_262161 MODEL 8705149 protein-coding Rps6kl1 ribosomal protein S6 kinase like 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955523 645444 659004 + 102015659 AGCD01068474;GBDF01251184;XM_005409384;XM_005409385 XP_005409441;XP_005409442 MODEL 8744360 protein-coding Rbm47 RNA binding motif protein 47 ENCODES a protein that exhibits enzyme binding (ortholog); enzyme-substrate adaptor activity (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cytidine to uridine editing (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN apolipoprotein B mRNA editing enzyme complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955443 6940523 7100130 + 102016758 AGCD01038268;AGCD01038269;AGCD01038270;AGCD01038271;AGCD01038272;GBBH01118381;XM_005391951;XM_005391952;XM_005391953;XM_005391954 XP_005392008;XP_005392009;XP_005392010;XP_005392011 MODEL 39131829 snrna U1 U1 spliceosomal RNA 39132944 snorna SNORA74 Small nucleolar RNA SNORA74 8841428 ncrna LOC102010025 uncharacterized LOC102010025 NW_004955407 17318652 17322814 + 102010025 AGCD01007247;GBDF01021440;XR_259568 MODEL 9041710 ncrna LOC102010830 uncharacterized LOC102010830 NW_004955513 2631451 2640898 - 102010830 AGCD01066883;GBDF01209406;XR_264458 MODEL 39131551 protein-coding PTGES3L prostaglandin E synthase 3 like 39133335 snrna U4 U4 spliceosomal RNA 8904230 protein-coding Ralbp1 ralA binding protein 1 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN doxorubicin transport (ortholog); endocytosis (ortholog); negative regulation of smooth muscle cell proliferation (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; vinblastine pharmacodynamics pathway; vincristine pharmacodynamics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog); nuclear body (ortholog) NW_004955402 2571672 2616040 - 102023859 AGCD01000084;AGCD01000085;AGCD01000086;GBCB01039887;XM_005372598;XM_005372599;XM_005372600;XM_005372601 XP_005372655;XP_005372656;XP_005372657;XP_005372658 MODEL 8889125 protein-coding LOC102019790 ral guanine nucleotide dissociation stimulator-like NW_004955413 5501732 5505766 - 102019790 AGCD01013681;AGCD01013682;GBDF01087005;GBDF01087006;XM_013511378 XP_013366832 MODEL 8865108 protein-coding Sec23b SEC23 homolog B, COPII component ASSOCIATED WITH acute myeloid leukemia (ortholog); Ascites (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endomembrane system (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955415 27044694 27075028 + 102018087 AGCD01016622;GBDF01003507;XM_005380933;XM_013512232 XP_005380990;XP_013367686 MODEL 8844075 protein-coding Spata2l spermatogenesis associated 2 like ASSOCIATED WITH Fanconi anemia (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955541 3242380 3246562 - 102015892 AGCD01071440;GBDF01146693;XM_005411058 XP_005411115 MODEL 39131484 protein-coding PGPEP1L pyroglutamyl-peptidase I like 9044392 protein-coding LOC102011198 signal-regulatory protein beta-1 NW_004955415 12897443 12955738 - 102011198 AGCD01016236;AGCD01016237;GBCE01043667;XM_013512246;XM_013512247;XM_013512248 XP_013367700;XP_013367701;XP_013367702 MODEL 8840211 pseudo LOC102018214 retinal dehydrogenase 1-like NW_004955434 130312 183170 - 102018214 AGCD01031996;AGCD01031997;AGCD01031998;AGCD01031999;AGCD01032000 MODEL 730469069 snorna SNORA32 Small nucleolar RNA SNORA32 8786768 protein-coding Btk Bruton tyrosine kinase ENCODES a protein that exhibits identical protein binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN B cell affinity maturation (ortholog); B cell receptor signaling pathway (ortholog); cell maturation (ortholog); PARTICIPATES IN erythropoietin signaling pathway; FasL mediated signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH Adenoviridae Infections (ortholog); agammaglobulinemia (ortholog); agammaglobulinemia 1 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955503 7483819 7515085 - 102026026 AGCD01064794;GBBH01034514;XM_005406951;XM_005406952 XP_005407008;XP_005407009 MODEL 8983139 protein-coding Spz1 spermatogenic leucine zipper 1 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); E-box binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955418 29458836 29460519 - 102017018 AGCD01019464;GBDF01007142;XM_005382324 XP_005382381 MODEL 9035347 protein-coding Setd9 SET domain containing 9 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955446 10994388 11004034 - 102013459 AGCD01040194;GBDF01050852;GBDF01050854;XM_013518469 XP_013373923 MODEL 9036278 protein-coding Tprg1 tumor protein p63 regulated 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955420 18632583 18853032 - 102019278 AGCD01021047;AGCD01021048;AGCD01021049;AGCD01021050;AGCD01021051;GBCC01000366;XM_005383239;XM_013513625;XM_013513626 XP_005383296;XP_013369079;XP_013369080 MODEL 8911809 pseudo LOC102004041 cofilin-2 pseudogene NW_004955408 16489538 16489996 - 102004041 AGCD01008440 MODEL 730469462 snorna SNORD47 Small nucleolar RNA SNORD47 8717592 protein-coding Slc30a6 solute carrier family 30 member 6 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); zinc:proton antiporter activity (ortholog); INVOLVED IN Golgi to endosome transport (ortholog); regulation of zinc ion transport (ortholog); zinc ion import into Golgi lumen (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955441 528256 567382 + 102021600 AGCD01036710;AGCD01036711;AGCD01036712;GBDF01128354;XM_005390837;XM_013517595 XP_005390894;XP_013373049 MODEL 8748836 ncrna LOC102008872 uncharacterized LOC102008872 NW_004955424 19963501 19969899 + 102008872 AGCD01024841;GBDI01147421;XR_001234129;XR_001234130;XR_001234131;XR_261086;XR_261087 MODEL 8967189 protein-coding Rgl2 ral guanine nucleotide dissociation stimulator like 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN negative regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); regulation of Ral protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog); high grade glioma (ortholog) NW_004955437 1851005 1857567 - 102003279 AGCD01034239;GBBH01030712;XM_005389484 XP_005389541 MODEL 10238147 protein-coding LOC106150325 translation initiation factor IF-2-like NW_004955472 1577929 1588095 - 106150325 AGCD01053401;AGCD01053402;GBDI01034980;GBDI01165836;XM_013522927 XP_013378381 MODEL 8891187 ncrna LOC102004796 uncharacterized LOC102004796 NW_004955467 6856123 6857620 - 102004796 AGCD01051425;GBDI01226874;XR_263346 MODEL 8827026 protein-coding Rogdi rogdi atypical leucine zipper INVOLVED IN amelogenesis (ortholog); bone mineralization (ortholog); brain development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog); FOUND IN hippocampal mossy fiber to CA3 synapse (ortholog); lysosome (ortholog); nuclear envelope (ortholog) NW_004955442 12694197 12700181 + 102029332 AGCD01037745;GBCQ01033826;XM_005391259 XP_005391316 MODEL 8796164 protein-coding LOC102013217 solute carrier family 22 member 1 NW_004955439 20691662 20716577 - 102013217 AGCD01036124;GBDI01310983;XM_005390705;XM_013517430 XP_005390762;XP_013372884 MODEL 8828936 protein-coding Washc4 WASH complex subunit 4 INVOLVED IN cognition (ortholog); endolysosomal toll-like receptor signaling pathway (ortholog); endosomal transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 43 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN BLOC-1 complex (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955405 39451423 39499295 + 102016230 AGCD01005500;AGCD01005501;GBDF01188550;XM_005374605 XP_005374662 MODEL 730469002 misc_rna RMST_5 Rhabdomyosarcoma 2 associated transcript conserved region 5 8723944 pseudo LOC102005865 transcription factor BTF3 homolog 4 pseudogene NW_004955588 220604 221041 + 102005865 AGCD01076095 MODEL 9063101 protein-coding Prrt3 proline rich transmembrane protein 3 NW_004955561 1430767 1437981 - 102014838 AGCD01073855;GBBH01213526;XM_005413055;XM_005413056;XM_005413057;XM_005413058 XP_005413112;XP_005413113;XP_005413114;XP_005413115 MODEL 39132794 snorna SNORA50 Small nucleolar RNA SNORA50 8972043 protein-coding Plekha3 pleckstrin homology domain containing A3 ENCODES a protein that exhibits identical protein binding (ortholog); molecular carrier activity (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); ASSOCIATED WITH familial hypercholesterolemia (ortholog); lymphoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955403 18347309 18366503 - 102025747 AGCD01002097;GBCE01098308;GBDK01139966;XM_013512613 XP_013368067 MODEL 39132946 snorna SNORA74 Small nucleolar RNA SNORA74 8922352 protein-coding Tie1 tyrosine kinase with immunoglobulin like and EGF like domains 1 INVOLVED IN aortic valve morphogenesis (ortholog); blood vessel development (ortholog); branching involved in lymph vessel morphogenesis (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955537 2894913 2914284 + 102024611 AGCD01070939;GBDK01005466;XM_005410646;XM_005410647 XP_005410703;XP_005410704 MODEL 8837576 ncrna LOC102016285 uncharacterized LOC102016285 NW_004955422 29292788 29300906 - 102016285 AGCD01023387;GBBH01024620;XR_001233958;XR_260933 MODEL 8784301 protein-coding Prelp proline and arginine rich end leucine rich repeat protein ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN cellular senescence (ortholog); ASSOCIATED WITH bone structure disease (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955406 39429845 39442577 + 102012727 AGCD01006628;AGCD01006629;GBBH01031868;XM_005375267;XM_013522616 XP_005375324;XP_013378070 MODEL 8968137 pseudo LOC102008500 serine/threonine-protein phosphatase 4 regulatory subunit 2-like NW_004955407 23016972 23161621 + 102008500 AGCD01007411;AGCD01007412;AGCD01007413;AGCD01007414;AGCD01007415 MODEL 8902409 protein-coding Pim1 Pim-1 proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits ATP binding (ortholog); manganese ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); negative regulation of innate immune response (ortholog); positive regulation of brown fat cell differentiation (ortholog); PARTICIPATES IN granulocyte-macrophage colony-stimulating factor signaling pathway; interleukin-3 signaling pathway; interleukin-5 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); Animal Disease Models (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955437 5940825 5945367 - 102015767 AGCD01034406;GBCB01094638;GBDJ01275927;XM_013517117 XP_013372571 MODEL 8964043 protein-coding Slc30a7 solute carrier family 30 member 7 ENCODES a protein that exhibits identical protein binding (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN intracellular zinc ion homeostasis (ortholog); zinc ion import into Golgi lumen (ortholog); zinc ion transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); Golgi apparatus (ortholog) NW_004955435 5530591 5609613 + 102007585 AGCD01032891;AGCD01032892;GBBH01036681;XM_005388805 XP_005388862 MODEL 39131503 protein-coding SPATA3 spermatogenesis associated 3 8921322 protein-coding Pofut2 protein O-fucosyltransferase 2 ENCODES a protein that exhibits fucosyltransferase activity (ortholog); peptide-O-fucosyltransferase activity (ortholog); INVOLVED IN mesoderm formation (ortholog); positive regulation of protein folding (ortholog); protein O-linked glycosylation via fucose (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955407 41972833 41984095 - 102012501 AGCD01007884;GBCQ01098842;XM_005375911 XP_005375968 MODEL 8953689 pseudo LOC102011201 40S ribosomal protein S27-like pseudogene NW_004955477 3377398 3380933 - 102011201 AGCD01055553 MODEL 730469473 snorna SNORA17 Small nucleolar RNA SNORA17 8987448 protein-coding LOC102003013 olfactory receptor 2S2-like NW_004955472 324392 328281 - 102003013 AGCD01053328;XM_013522926 XP_013378380 MODEL 8934243 protein-coding LOC102019442 zinc transporter 1-like NW_004955442 19617356 19619919 - 102019442 AGCD01038070;AGCD01038071;GBDF01252767;XM_013518023 XP_013373477 MODEL 8705218 pseudo LOC102018215 60S ribosomal protein L7 pseudogene NW_004955521 4288386 4289394 - 102018215 AGCD01068259 MODEL 8726752 protein-coding Ppil4 peptidylprolyl isomerase like 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); spliceosomal complex (ortholog) NW_004955439 11705096 11745478 + 102012687 AGCD01035919;AGCD01035920;AGCD01035921;AGCD01035922;GBDF01189460;XM_005390608 XP_005390665 MODEL 8930387 protein-coding Btla B and T lymphocyte associated ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); immune response-regulating cell surface receptor signaling pathway (ortholog); negative regulation of alpha-beta T cell proliferation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog); plasma membrane protein complex (ortholog) NW_004955427 12804467 12837178 - 102026657 AGCD01027226;AGCD01027227;GBDI01324577;XM_005386387 XP_005386444 MODEL 8842478 protein-coding Trmt112 tRNA methyltransferase activator subunit 11-2 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein methyltransferase activity (ortholog); tRNA methyltransferase activator activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); rRNA (guanine-N7)-methylation (ortholog); rRNA methylation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN cytoplasm (ortholog); histone methyltransferase complex (ortholog); methyltransferase complex (ortholog) NW_004955422 20767599 20768505 + 102012548 AGCD01023086;GBDF01007908;XM_005384605 XP_005384662 MODEL 8875611 ncrna LOC102012033 uncharacterized LOC102012033 NW_004955444 1600025 1605604 + 102012033 AGCD01038732;GBDF01041654;XR_001235529 MODEL 8808913 protein-coding LOC102005466 mas-related G-protein coupled receptor member X1 NW_004955476 26643 27677 - 102005466 AGCD01055190;XM_005401897 XP_005401954 MODEL 8746455 protein-coding Rps7 ribosomal protein S7 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); poly(U) RNA binding (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); neural tube closure (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955487 3793168 3798007 - 102017669 AGCD01059294;GBCC01001033;XM_005404373 XP_005404430 MODEL 9000283 protein-coding Setdb1 SET domain bifurcated histone lysine methyltransferase 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone H3K14ac reader activity (ortholog); INVOLVED IN bone development (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); gene expression (ortholog); PARTICIPATES IN histone modification pathway; homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955588 290497 338438 + 102017932 AGCD01076102;AGCD01076103;AGCD01076104;AGCD01076105;GBDF01085935;XM_005414466;XM_005414467;XM_005414468;XM_005414469;XM_013509910;XM_013509911 XP_005414523;XP_005414524;XP_005414525;XP_005414526;XP_013365364;XP_013365365 MODEL 8926045 protein-coding Rbm48 RNA binding motif protein 48 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); U12-type catalytic step 2 spliceosome (ortholog) NW_004955432 9461507 9498099 + 102004630 AGCD01030906;GBDF01196141;XM_005388020;XM_005388021;XM_013515938;XM_013515939;XR_261518 XP_005388077;XP_005388078;XP_013371392;XP_013371393 MODEL 9010276 pseudo LOC102008128 transcription initiation factor TFIID subunit 9-like NW_004955427 1717479 1718907 + 102008128 AGCD01026879 MODEL 8930553 ncrna LOC102010832 uncharacterized LOC102010832 NW_004955437 2142308 2145021 + 102010832 AGCD01034260;GBDF01276932;XR_261830 MODEL 730469389 snorna SNORA50 Small nucleolar RNA SNORA50 8880585 pseudo LOC102010026 transmembrane protein 50A pseudogene NW_004955455 8395596 8396361 - 102010026 AGCD01045888 MODEL 8841448 protein-coding Ptgfr prostaglandin F receptor ENCODES a protein that exhibits prostaglandin F receptor activity (ortholog); INVOLVED IN cellular response to prostaglandin D stimulus (ortholog); maternal process involved in female pregnancy (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Airway Obstruction (ortholog); endometriosis (ortholog); myoepithelioma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955423 14768208 14816462 - 102010499 AGCD01023777;AGCD01023778;AGCD01023779;GBCQ01179014;XM_005385183;XM_013514554;XM_013514555 XP_005385240;XP_013370008;XP_013370009 MODEL 39133336 snrna U4 U4 spliceosomal RNA 8874949 pseudo LOC102019797 mitochondrial fission factor pseudogene NW_004955414 25120858 25122118 + 102019797 AGCD01015576;XM_005380525 MODEL 10205573 ncrna LOC106147427 uncharacterized LOC106147427 NW_004955558 789810 792199 + 106147427 AGCD01073390;GBDF01066394;XR_001232327 MODEL 8774344 protein-coding Prep prolyl endopeptidase ENCODES a protein that exhibits endopeptidase activity (ortholog); metallocarboxypeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN angiotensin maturation (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amnestic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955411 30698112 30797096 - 102003527 AGCD01012263;GBCB01024464;GBDI01221451;XM_013510786 XP_013366240 MODEL 8989832 ncrna LOC102004798 uncharacterized LOC102004798 NW_004955467 11715338 11717008 - 102004798 AGCD01051616;GBDF01192925;XR_263361 MODEL 8836055 protein-coding Pgr progesterone receptor ENCODES a protein that exhibits ATPase binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to gonadotropin stimulus (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Brain Injuries (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); chromatin (ortholog) NW_004955412 4643839 4693478 - 102007639 AGCD01012599;AGCD01012600;AGCD01012601;GBCE01175276;GBDJ01419714;XM_005377963 XP_005378020 MODEL 8735754 pseudo LOC102011624 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955406 19815337 19816321 - 102011624 AGCD01006092 MODEL 730469556 snorna SNORA32 Small nucleolar RNA SNORA32 8777344 protein-coding Sqle squalene epoxidase ENCODES a protein that exhibits FAD binding (ortholog); squalene monooxygenase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol metabolic process (ortholog); lipid droplet formation (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholelithiasis (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955461 121886 143389 + 102028063 AGCD01048791;GBDF01002848;XM_005397981 XP_005398038 MODEL 8920217 ncrna LOC102003014 uncharacterized LOC102003014 NW_004955472 1903577 1923457 + 102003014 AGCD01053416;AGCD01053417;AGCD01053418;AGCD01053419;GBDF01013402;XR_001237086 MODEL 39131837 snrna U1 U1 spliceosomal RNA 8769906 ncrna LOC102022325 uncharacterized LOC102022325 NW_004955534 3881965 3883137 - 102022325 AGCD01070605;GBDI01106511;XR_264762 MODEL 8928099 protein-coding Epcip exosomal polycystin 1 interacting protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mitocytosis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); stomach cancer (ortholog); FOUND IN extracellular exosome (ortholog); migrasome (ortholog); vesicle (ortholog) NW_004955407 32229108 32249097 - 102017952 AGCD01007671;GBDJ01114206;XM_005375674 XP_005375731 MODEL 8914011 protein-coding LOC102007321 uncharacterized LOC102007321 NW_004955413 2702114 2703313 - 102007321 AGCD01013558;GBCB01123825;XM_005378745;XM_005378746 XP_005378802;XP_005378803 MODEL 39131954 snorna SNORA75 Small nucleolar RNA SNORA75 8702252 ncrna LOC102006202 uncharacterized LOC102006202 NW_004955452 4902765 4908470 + 102006202 AGCD01044001;GBCC01009101;XR_262655 MODEL 8815817 protein-coding Sec23ip SEC23 interacting protein INVOLVED IN acrosome assembly (ortholog); single fertilization (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum exit site (ortholog); perinuclear endoplasmic reticulum (ortholog) NW_004955551 695026 746359 + 102013972 AGCD01072669;AGCD01072670;AGCD01072671;AGCD01072672;AGCD01072673;GBDF01088113;XM_005412171;XM_013508588 XP_005412228;XP_013364042 MODEL 8743113 protein-coding Tifa TRAF interacting protein with forkhead associated domain INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); innate immune response (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); ubiquitin ligase complex (ortholog) NW_004955457 14444811 14460168 + 102020529 AGCD01047073;GBDF01293417;XM_005397102;XM_005397103;XR_262952;XR_262953 XP_005397159;XP_005397160 MODEL 8969773 protein-coding Ralgapa1 Ral GTPase activating protein catalytic subunit alpha 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein heterodimerization activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955409 25336503 25582881 + 102027724 AGCD01010113;AGCD01010114;AGCD01010115;AGCD01010116;AGCD01010117;AGCD01010118;GBDF01112173;XM_005376915;XM_005376917;XM_005376919;XM_013510369;XM_013510370;XM_013510371;XM_013510372;XM_013510373 XP_005376972;XP_005376974;XP_005376976;XP_013365823;XP_013365824;XP_013365825;XP_013365826;XP_013365827 MODEL 730469493 snorna SNORA17 Small nucleolar RNA SNORA17 8843577 protein-coding Tprg1l tumor protein p63 regulated 1 like ENCODES a protein that exhibits calmodulin binding (ortholog); identical protein binding (ortholog); vesicle docking activity (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); negative regulation of synaptic transmission (ortholog); regulation of synaptic transmission, glutamatergic (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN calyx of Held (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); glutamatergic synapse (ortholog) NW_004955486 8007678 8013996 - 102027308 AGCD01059145;GBDF01009572;XM_005404149 XP_005404206 MODEL 10276227 protein-coding Snurf SNRPN upstream open reading frame ENCODES a protein that exhibits ATPase binding (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955416 31655664 31668803 + 106146229 AGCD01017766;AGCD01017767;AGCD01017768;XM_005381679 XP_005381736 MODEL 730469260 misc_rna RMST_6 Rhabdomyosarcoma 2 associated transcript conserved region 6 8956722 protein-coding Ppil6 peptidylprolyl isomerase like 6 ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955411 34449508 34481370 - 102018067 AGCD01012401;GBDI01024216;XM_005377868;XM_005377869;XM_005377870;XM_005377871;XM_005377872;XM_005377873;XM_005377874;XM_013510822;XM_013510823 XP_005377925;XP_005377926;XP_005377927;XP_005377928;XP_005377929;XP_005377930;XP_005377931;XP_013366276;XP_013366277 MODEL 8983630 protein-coding LOC102004045 protocadherin Fat 2 NW_004955410 4266352 4360690 + 102004045 AGCD01010661;AGCD01010662;AGCD01010663;AGCD01010664;AGCD01010665;AGCD01010666;GBBH01166136;XM_005377194;XM_005377195;XM_005377196 XP_005377251;XP_005377252;XP_005377253 MODEL 9059246 pseudo LOC102008130 40S ribosomal protein S15a pseudogene NW_004955428 3708701 3774517 + 102008130 AGCD01027660;AGCD01027661 MODEL 8941876 protein-coding Prrt4 proline rich transmembrane protein 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); COVID-19 (ortholog) NW_004955479 9355216 9364982 - 102022918 AGCD01056461;AGCD01056462;GBDI01309642;XM_013503258 XP_013358712 MODEL 8814179 protein-coding LOC102005867 protein S100-A8 ASSOCIATED WITH Acute Otitis Media NW_004955592 72594 73659 + 102005867 AGCD01076300;GBBH01004217;XM_005414602;XM_013509975 XP_005414659;XP_013365429 MODEL 8887043 ncrna LOC102008873 uncharacterized LOC102008873 NW_004955427 6400197 6403763 + 102008873 AGCD01027028;GBDF01126299;XR_261236 MODEL 10093974 protein-coding LOC106150326 uncharacterized LOC106150326 NW_004955472 7377896 7382389 + 106150326 AGCD01053621;AGCD01053622;GBDJ01034346;XM_013522929 XP_013378383 MODEL 8978307 ncrna LOC102008501 uncharacterized LOC102008501 NW_004955457 7028448 7038296 + 102008501 AGCD01046864;GBCB01099923;XR_262927 MODEL 39133268 snorna SNORD48 Small nucleolar RNA SNORD48 8785802 protein-coding Rom1 retinal outer segment membrane protein 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN camera-type eye photoreceptor cell differentiation (ortholog); detection of light stimulus involved in visual perception (ortholog); photoreceptor cell outer segment organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); fundus dystrophy (ortholog); optic atrophy (ortholog); FOUND IN photoreceptor outer segment (ortholog); photoreceptor outer segment membrane (ortholog) NW_004955599 578165 580055 - 102016117 AGCD01076660;GBDF01146204;XM_005414793 XP_005414850 MODEL 8890214 protein-coding Slc30a8 solute carrier family 30 member 8 ENCODES a protein that exhibits protein homodimerization activity (ortholog); zinc ion transmembrane transporter activity (ortholog); zinc:proton antiporter activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); insulin processing (ortholog); insulin secretion (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); maturity-onset diabetes of the young type 1 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955417 23207146 23239170 + 102030631 AGCD01018434;GBDF01144404;XM_013512711 XP_013368165 MODEL 8783182 protein-coding Washc5 WASH complex subunit 5 INVOLVED IN endosomal transport (ortholog); lysosome organization (ortholog); meiotic spindle assembly (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955461 145993 199274 - 102028387 AGCD01048791;AGCD01048792;GBCB01089643;XM_005397982;XM_005397983;XM_005397985;XM_013521306;XM_013521307 XP_005398039;XP_005398040;XP_005398042;XP_013376760;XP_013376761 MODEL 730469120 snorna SNORA32 Small nucleolar RNA SNORA32 8881977 protein-coding LOC102011202 circumsporozoite protein-like NW_004955478 6863782 6864540 - 102011202 AGCD01055921;AGCD01055922;XM_005402156;XM_013503235;XM_013503236;XM_013503237 XP_005402213;XP_013358689;XP_013358690;XP_013358691 MODEL 8918719 protein-coding LOC102003015 olfactory receptor 51G2-like NW_004955414 20898763 20899722 - 102003015 AGCD01015395;XM_005380485 XP_005380542 MODEL 9050663 protein-coding Trmt13 tRNA methyltransferase 13 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955435 4885910 4902759 + 102022535 AGCD01032861;GBDF01002213;GBDJ01075836;XM_013516438 XP_013371892 MODEL 8861892 protein-coding Rbm5 RNA binding motif protein 5 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); spliceosomal complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955532 1929540 1957297 + 102024380 AGCD01070208;GBBH01063051;GBDF01081334;XM_013507632 XP_013363086 MODEL 9027736 ncrna LOC102010035 uncharacterized LOC102010035 NW_004955460 30819 34048 + 102010035 AGCD01048329;GBDF01187342;XR_263021 MODEL 8825130 protein-coding Epdr1 ependymin related 1 ENCODES a protein that exhibits ganglioside GM1 binding (ortholog); identical protein binding (ortholog); phospholipid binding (ortholog); INVOLVED IN myofibroblast contraction (ortholog); ASSOCIATED WITH angle-closure glaucoma (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN extracellular region (ortholog); lysosomal lumen (ortholog); lysosome (ortholog) NW_004955460 5612589 5650222 - 102025881 AGCD01048455;AGCD01048456;GBDJ01134723;XM_005397745;XM_005397746 XP_005397802;XP_005397803 MODEL 8750984 pseudo LOC102007328 sal-like protein 4 NW_004955470 12748580 12750141 - 102007328 AGCD01052938 MODEL 39133337 snrna U4 U4 spliceosomal RNA 8917357 protein-coding Ptgfrn prostaglandin F2 receptor inhibitor INVOLVED IN lipid droplet organization (ortholog); myoblast fusion involved in skeletal muscle regeneration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955435 20046712 20092051 + 102004001 AGCD01033445;GBDJ01272892;XM_005389111 XP_005389168 MODEL 9033918 pseudo LOC102013218 spindle and kinetochore-associated protein 2-like NW_004955440 2553852 2554722 + 102013218 AGCD01036210 MODEL 9067082 protein-coding LOC102019799 proline-rich protein 2-like NW_004955415 13940809 13946248 + 102019799 AGCD01016278;GBCB01033686;XM_005380769 XP_005380826 MODEL 8767659 protein-coding Spata3 spermatogenesis associated 3 FOUND IN sperm flagellum (ortholog) NW_004955453 4435819 4453138 - 102007732 AGCD01044691;GBDF01011046;XM_013519989;XM_013519990;XR_001236193;XR_001236194 XP_013375443;XP_013375444 MODEL 9026497 protein-coding Pgrmc1 progesterone receptor membrane component 1 ENCODES a protein that exhibits heme binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN associative learning (ortholog); axon guidance (ortholog); heme biosynthetic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN cell body (ortholog); extracellular region (ortholog); mitochondrial outer membrane (ortholog) NW_004955534 698895 706586 - 102013446 AGCD01070467;GBBH01003936;XM_005410449 XP_005410506 MODEL 9019484 protein-coding Sqor sulfide quinone oxidoreductase ENCODES a protein that exhibits glutathione-dependent sulfide quinone oxidoreductase activity (ortholog); sulfide:quinone oxidoreductase activity (ortholog); INVOLVED IN sulfide oxidation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955409 7831698 7857249 - 102017960 AGCD01009367;GBCB01056193;XM_005376724 XP_005376781 MODEL 8897851 protein-coding LOC102004805 cystatin-12-like NW_004955415 30453323 30456586 + 102004805 AGCD01016664;GBDF01005832;XM_005380969 XP_005381026 MODEL 8808855 protein-coding Prepl prolyl endopeptidase like ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN Golgi to plasma membrane protein transport (ortholog); regulation of synaptic vesicle exocytosis (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoskeleton (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) NW_004955441 11418299 11453889 - 102004977 AGCD01037107;AGCD01037108;AGCD01037109;GBBH01001037;XM_005390951;XM_005390952;XM_005390955;XM_005390957;XM_005390961;XM_013517570;XM_013517571;XM_013517572;XM_013517573;XM_013517574;XM_013517575;XM_013517576;XM_013517577 XP_005391008;XP_005391009;XP_005391012;XP_005391014;XP_005391018;XP_013373024;XP_013373025;XP_013373026;XP_013373027;XP_013373028;XP_013373029;XP_013373030;XP_013373031 MODEL 8857878 protein-coding LOC102018217 ubiquitin-conjugating enzyme E2 D2-like NW_004955525 1483494 1484306 + 102018217 AGCD01069039;XM_005409723;XM_005409724;XM_005409725 XP_005409780;XP_005409781;XP_005409782 MODEL 8864864 pseudo LOC102011627 glyceraldehyde-3-phosphate dehydrogenase pseudogene NW_004955456 12484506 12486673 - 102011627 AGCD01046567 MODEL 9008565 protein-coding Plekha4 pleckstrin homology domain containing A4 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of Wnt signaling pathway, planar cell polarity pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN extrinsic component of cytoplasmic side of plasma membrane (ortholog) NW_004955559 1756695 1775558 + 102003593 AGCD01073666;GBCQ01039883;XM_005412930 XP_005412987 MODEL 8963385 protein-coding Btn1a1 butyrophilin subfamily 1 member A1 ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); stomach cancer (ortholog) NW_004955483 392749 409947 - 102012199 AGCD01057609;GBCB01025102;XM_005403280;XM_005403281;XM_005403282;XM_005403283;XM_005403284;XM_013503766 XP_005403337;XP_005403338;XP_005403339;XP_005403340;XP_005403341;XP_013359220 MODEL 8885925 protein-coding Ralgapa2 Ral GTPase activating protein catalytic subunit alpha 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN Ral protein signal transduction (ortholog); regulation of exocyst localization (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955415 28414856 28663485 - 102022075 AGCD01016641;AGCD01016642;AGCD01016643;GBCQ01150403;XM_005380947;XM_013512249 XP_005381004;XP_013367703 MODEL 8734111 protein-coding Rps8 ribosomal protein S8 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955464 13443580 13445391 - 102006993 AGCD01050279;AGCD01050280;GBCB01003744;GBDI01000130;XM_013521630 XP_013377084 MODEL 730469186 snorna SNORA51 Small nucleolar RNA SNORA51 8854618 protein-coding Wasl WASP like actin nucleation promoting factor ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); dendritic spine morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atopic dermatitis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cap (ortholog); cell leading edge (ortholog); cytoplasm (ortholog) NW_004955479 5167851 5200512 - 102015717 AGCD01056340;GBCQ01037898;XM_005402337 XP_005402394 MODEL 8914093 pseudo LOC102010833 ADP-ribosylation factor-like protein 2-binding protein pseudogene NW_004955532 3917497 3917975 - 102010833 AGCD01070305 MODEL 8753076 ncrna LOC102016289 uncharacterized LOC102016289 NW_004955424 1110503 1115154 - 102016289 AGCD01024231;GBDF01013947;XR_261020 MODEL 10313172 ncrna LOC106150327 uncharacterized LOC106150327 NW_004955472 2834860 2839447 + 106150327 AGCD01053492;GBCE01043397;XR_001237070;XR_001237071 MODEL 8975019 protein-coding Setdb2 SET domain bifurcated histone lysine methyltransferase 2 ENCODES a protein that exhibits histone H3K9 methyltransferase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic cell cycle (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955431 2899849 2943091 + 102024712 AGCD01029942;GBCC01045530;XM_005387590;XM_005387591;XM_005387592;XM_013515747;XM_013515748 XP_005387647;XP_005387648;XP_005387649;XP_013371201;XP_013371202 MODEL 8964661 pseudo LOC102005870 RING finger and transmembrane domain-containing protein 1 pseudogene NW_004955602 483146 483899 - 102005870 AGCD01076788 MODEL 9056289 pseudo LOC102008504 nuclear receptor subfamily 5 group A member 2 pseudogene NW_004955408 668410 669063 + 102008504 AGCD01007925 MODEL 8955948 protein-coding LOC102019444 splicing factor, arginine/serine-rich 19 NW_004955559 1235878 1243218 - 102019444 AGCD01073638;GBBH01142756;GBDF01090351;XM_013508983 XP_013364437 MODEL 10186588 protein-coding LOC106147429 basic proline-rich protein-like NW_004955558 860196 861286 + 106147429 AGCD01073395;AGCD01073396;GBDF01118753;GBDF01118755;XM_013508885 XP_013364339 MODEL 8708247 protein-coding Rgl3 ral guanine nucleotide dissociation stimulator like 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955495 2304820 2319171 - 102029874 AGCD01061764;AGCD01061765;AGCD01061766;GBCE01074618;XM_013505110 XP_013360564 MODEL 8858319 protein-coding Tigar TP53 induced glycolysis regulatory phosphatase ENCODES a protein that exhibits fructose-2,6-bisphosphate 2-phosphatase activity (ortholog); INVOLVED IN cellular response to cobalt ion (ortholog); cellular response to hypoxia (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Nerve Degeneration (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) NW_004955413 2129719 2153873 + 102029277 AGCD01013540;AGCD01013541;GBDF01122114;XM_005378727;XM_005378728 XP_005378784;XP_005378785 MODEL 730469503 snorna SNORA17 Small nucleolar RNA SNORA17 8725211 pseudo LOC102005472 CWF19-like protein 2 NW_004955481 1830281 1834787 + 102005472 AGCD01056855 MODEL 730468934 misc_rna RMST_7 Rhabdomyosarcoma 2 associated transcript conserved region 7 9016547 protein-coding Tprkb TP53RK binding protein ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN tRNA threonylcarbamoyladenosine modification (ortholog); ASSOCIATED WITH Galloway-Mowat syndrome (ortholog); Galloway-Mowat syndrome 5 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); EKC/KEOPS complex (ortholog) NW_004955424 11961994 11969610 - 102010066 AGCD01024584;GBDI01179923;XM_005385539;XM_005385540;XM_005385541;XM_005385542;XM_005385544 XP_005385596;XP_005385597;XP_005385598;XP_005385599;XP_005385601 MODEL 39131843 snrna U1 U1 spliceosomal RNA 8705388 ncrna LOC102022326 uncharacterized LOC102022326 NW_004955538 1051081 1056074 - 102022326 AGCD01071043;GBDF01261166;XR_264794 MODEL 8988137 pseudo LOC102004058 olfactory receptor 51I1-like NW_004955414 21304994 21305922 + 102004058 AGCD01015412 MODEL 730469510 snorna SNORA51 Small nucleolar RNA SNORA51 8787750 protein-coding Trmt1l tRNA methyltransferase 1L ENCODES a protein that exhibits tRNA (guanine(27)-N2)-dimethyltransferase activity (ortholog); INVOLVED IN adult behavior (ortholog); adult locomotory behavior (ortholog); tRNA N2-guanine methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955406 23735715 23772010 - 102008816 AGCD01006182;AGCD01006183;AGCD01006184;GBDF01007025;XM_005375072;XM_005375073;XM_013521695;XM_013521698 XP_005375129;XP_005375130;XP_013377149;XP_013377152 MODEL 8723945 protein-coding Prrx1 paired related homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN artery morphogenesis (ortholog); cartilage development (ortholog); embryonic cranial skeleton morphogenesis (ortholog); ASSOCIATED WITH agnathia-otocephaly complex (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955462 6919905 6991733 + 102006989 AGCD01049292;AGCD01049293;GBCE01001518;XM_005398172;XM_005398173 XP_005398229;XP_005398230 MODEL 8840654 pseudo LOC102008132 40S ribosomal protein S15 pseudogene NW_004955429 10102174 10102807 + 102008132 AGCD01028666 MODEL 9045456 protein-coding Rbm6 RNA binding motif protein 6 ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955532 1811794 1914551 + 102023074 AGCD01070200;AGCD01070201;AGCD01070202;AGCD01070203;AGCD01070204;AGCD01070205;GBDF01050658;XM_005410236;XM_013507616;XM_013507617 XP_005410293;XP_013363070;XP_013363071 MODEL 39131955 snorna SNORA75 Small nucleolar RNA SNORA75 8834417 protein-coding Pofut3 protein O-fucosyltransferase 3 ENCODES a protein that exhibits alpha-(1->3)-fucosyltransferase activity (ortholog); fucosyltransferase activity (ortholog); peptide-O-fucosyltransferase activity (ortholog); INVOLVED IN cerebral cortex radially oriented cell migration (ortholog); N-glycan processing (ortholog); neuronal stem cell division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955463 9552387 9629029 - 102007203 AGCD01049788;AGCD01049789;AGCD01049790;AGCD01049791;AGCD01049792;AGCD01049793;AGCD01049794;GBCB01077274;GBCB01077275;XM_013521503;XR_001236637;XR_001236638 XP_013376957 MODEL 8841427 pseudo LOC102008875 phosducin-like protein 3 pseudogene NW_004955427 21601337 21602111 + 102008875 AGCD01027451 MODEL 8757293 ncrna LOC102006203 uncharacterized LOC102006203 NW_004955404 45391064 45417702 - 102006203 AGCD01004443;GBDF01040437;XR_259340 MODEL 8904162 protein-coding Snw1 SNW domain containing 1 ENCODES a protein that exhibits enzyme binding (ortholog); Notch binding (ortholog); nuclear androgen receptor binding (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); host-mediated activation of viral transcription (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); anemia (ortholog); Brain Injuries (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromatin (ortholog); cyclin/CDK positive transcription elongation factor complex (ortholog) NW_004955438 1561562 1601492 - 102019433 AGCD01034986;GBDF01008825;XM_005390214 XP_005390271 MODEL 730468932 snorna SNORD49 Small nucleolar RNA SNORD49 9016495 protein-coding Romo1 reactive oxygen species modulator 1 ENCODES a protein that exhibits monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); monoatomic cation transmembrane transport (ortholog); positive regulation of reactive oxygen species metabolic process (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); TIM23 mitochondrial import inner membrane translocase complex (ortholog) NW_004955422 25757558 25760054 - 102006926 AGCD01023266;GBDF01002496;XM_005384775 XP_005384832 MODEL 9057901 protein-coding Slc30a9 solute carrier family 30 member 9 ENCODES a protein that exhibits chromatin binding (ortholog); nuclear receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN intracellular zinc ion homeostasis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of mitochondrion organization (ortholog); ASSOCIATED WITH bilirubin metabolic disorder (ortholog); Birk-Landau-Perez Syndrome (ortholog); cerebellar hypoplasia (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytoskeleton (ortholog); endoplasmic reticulum (ortholog) NW_004955443 5641372 5716188 - 102009766 AGCD01038243;GBDF01187667;XM_005391923 XP_005391980 MODEL 8908417 protein-coding Pgrmc2 progesterone receptor membrane component 2 ENCODES a protein that exhibits heme binding (ortholog); heme transmembrane transporter activity (ortholog); INVOLVED IN adipose tissue development (ortholog); heme transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Hirschsprung's disease (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); glutamatergic synapse (ortholog) NW_004955428 13260915 13278656 + 102015550 AGCD01027946;AGCD01027947;GBBH01118701;GBDF01122101;XM_013515321 XP_013370775 MODEL 8916035 pseudo LOC102011203 multifunctional protein ADE2 pseudogene NW_004955481 3893416 3894341 + 102011203 AGCD01056921;XR_263775 MODEL 730468988 misc_rna RMST_8 Rhabdomyosarcoma 2 associated transcript conserved region 8 8743367 protein-coding LOC102003016 uncharacterized LOC102003016 NW_004955415 11944706 11993056 - 102003016 AGCD01016181;AGCD01016182;GBDF01221008;XM_013512125 XP_013367579 MODEL 8891427 protein-coding Rps9 ribosomal protein S9 ENCODES a protein that exhibits 5.8S rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) NW_004955604 73593 76414 - 102011384 AGCD01076861;GBDJ01021129;XM_005414849 XP_005414906 MODEL 8730198 pseudo LOC102012039 creatine kinase U-type, mitochondrial pseudogene NW_004955447 18787639 18792112 - 102012039 AGCD01041191 MODEL 8901826 ncrna LOC102010037 uncharacterized LOC102010037 NW_004955460 11260440 11300237 + 102010037 AGCD01048631;GBDF01076385;XR_001236536;XR_263060 MODEL 39133338 snrna U4 U4 spliceosomal RNA 8704306 pseudo LOC102007330 ATP synthase F(0) complex subunit B1, mitochondrial pseudogene NW_004955414 4403610 4404427 - 102007330 AGCD01014865 MODEL 9040518 pseudo LOC102019801 KDEL motif-containing protein 2 pseudogene NW_004955415 5789037 5790513 - 102019801 AGCD01016001 MODEL 8927828 protein-coding Ptgir prostaglandin I2 receptor INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of platelet-derived growth factor receptor signaling pathway (ortholog); negative regulation of smooth muscle cell proliferation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; prostaglandin I2 signaling pathway; ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); atrial fibrillation (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955574 686156 690126 - 102028353 AGCD01075122;GBDK01305224;XM_005413837;XM_005413838;XM_013509573 XP_005413894;XP_005413895;XP_013365027 MODEL 8790886 protein-coding Setx senataxin ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); 5'-3' DNA/RNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to oxidative stress (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 4 (ortholog); FOUND IN axon (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955513 1718432 1776133 - 102026139 AGCD01066862;GBDK01147152;GBDK01147154;XM_005408377 XP_005408434 MODEL 8905108 protein-coding LOC102013220 olfactory receptor 4N5 NW_004955550 102932 103858 - 102013220 AGCD01072481;XM_005412027 XP_005412084 MODEL 8767594 protein-coding Sqstm1 sequestosome 1 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN aggrephagy (ortholog); autophagy (ortholog); brown fat cell proliferation (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; mitochondrial autophagy pathway; nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); FOUND IN aggresome (ortholog); amphisome (ortholog); autolysosome (ortholog) NW_004955408 757426 764989 - 102030388 AGCD01007929;GBBH01004456;GBDF01051499;XM_013507872 XP_013363326 MODEL 9053578 protein-coding LOC102018220 butyrophilin subfamily 1 member A1-like NW_004955437 999109 1050071 - 102018220 AGCD01034182;AGCD01034183;AGCD01034184;AGCD01034185;AGCD01034186;AGCD01034187;GBCQ01003449;XM_005389445 XP_005389502 MODEL 8842458 pseudo LOC102011628 26S proteasome non-ATPase regulatory subunit 14-like NW_004955457 7388758 7389844 + 102011628 AGCD01046877 MODEL 730469590 snorna SNORA32 Small nucleolar RNA SNORA32 8899846 protein-coding LOC102005475 E3 ubiquitin-protein ligase Topors-like NW_004955419 22119355 22127230 - 102005475 AGCD01020294;AGCD01020295;GBDF01224788;XM_005382789 XP_005382846 MODEL 9015525 protein-coding Tigd2 tigger transposable element derived 2 NW_004955405 80872 84184 + 102004447 AGCD01004553;GBDI01262079;XM_013517268 XP_013372722 MODEL 8770324 protein-coding Plekha5 pleckstrin homology domain containing A5 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN reproductive system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); BILATERAL CLEFT LIP (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955413 15239070 15470137 + 102012418 AGCD01014067;AGCD01014068;AGCD01014069;AGCD01014070;AGCD01014071;AGCD01014072;AGCD01014073;GBBH01165630;GBDF01085078;XM_013511432;XM_013511433;XM_013511434;XM_013511435 XP_013366886;XP_013366887;XP_013366888;XP_013366889 MODEL 8822290 protein-coding Pim2 Pim-2 proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); G1/S transition of mitotic cell cycle (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lymphoma (ortholog); melanoma (ortholog) NW_004955543 444314 449201 - 102028018 AGCD01071585;GBDJ01088625;XM_005411290;XM_005411291 XP_005411347;XP_005411348 MODEL 8882475 protein-coding Tprn taperin ENCODES a protein that exhibits actin binding (ortholog); protein phosphatase 1 binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); sensory perception of sound (ortholog); stereocilium maintenance (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 79 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); microvillus (ortholog); nucleoplasm (ortholog) NW_004955513 5196871 5205945 - 102030460 AGCD01066961;AGCD01066962;GBBH01187440;GBCB01087279;XM_005408661 XP_005408718 MODEL 8868781 protein-coding Ralgapb Ral GTPase activating protein non-catalytic subunit beta ENCODES a protein that exhibits GTPase activator activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN Ral protein signal transduction (ortholog); regulation of exocyst localization (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955445 18146316 18241128 - 102010426 AGCD01039898;AGCD01039899;AGCD01039900;AGCD01039901;GBCE01075919;XM_005392533;XM_005392534;XM_013518287;XM_013518288 XP_005392590;XP_005392591;XP_013373741;XP_013373742 MODEL 8895433 protein-coding LOC102010836 protein S100-A6-like NW_004955545 93760 170651 - 102010836 AGCD01071765;AGCD01071766;AGCD01071767;AGCD01071768;AGCD01071769;AGCD01071770;AGCD01071771;AGCD01071772;AGCD01071773;AGCD01071774;GBDJ01329857;XM_005411405;XR_001232180 XP_005411462 MODEL 10369020 ncrna LOC106150328 uncharacterized LOC106150328 NW_004955472 2417077 2421696 - 106150328 AGCD01053460;XR_001237072 MODEL 8945454 protein-coding Wbp1 WW domain binding protein 1 ENCODES a protein that exhibits WW domain binding (ortholog) NW_004955424 11321393 11323651 - 102027420 AGCD01024562;GBCB01039025;XM_005385504;XM_005385505 XP_005385561;XP_005385562 MODEL 8713342 ncrna LOC102012041 uncharacterized LOC102012041 NW_004955402 6962055 6984367 - 102012041 AGCD01000163;GBDF01177670;XR_001235410;XR_001235416;XR_001235420;XR_001235423;XR_259036 MODEL 8803453 protein-coding LOC102005873 PRAME family member 12-like NW_004955615 256153 258758 + 102005873 AGCD01077252;XM_005414985 XP_005415042 MODEL 8987797 pseudo LOC102019451 arylacetamide deacetylase-like NW_004955448 3159746 3167553 - 102019451 AGCD01041306 MODEL 8905569 pseudo LOC102004807 putative protein FAM10A5 NW_004955415 13842980 13844236 - 102004807 AGCD01016270 MODEL 8982280 protein-coding LOC102006204 hematopoietic prostaglandin D synthase NW_004955405 565811 595570 + 102006204 AGCD01004574;AGCD01004575;AGCD01004576;AGCD01004577;AGCD01004578;AGCD01004579;GBBH01172499;GBCE01033157;XM_013517297 XP_013372751 MODEL 8846021 protein-coding Ropn1 rhophilin associated tail protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium organization (ortholog); flagellated sperm motility (ortholog); protein localization to cilium (ortholog); ASSOCIATED WITH high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); sperm cytoplasmic droplet (ortholog); sperm principal piece (ortholog) NW_004955427 23104178 23140559 - 102025602 AGCD01027480;AGCD01027481;GBDF01008345;XM_013515030 XP_013370484 MODEL 8903879 protein-coding Pgs1 phosphatidylglycerophosphate synthase 1 PARTICIPATES IN cardiolipin biosynthetic pathway; glycerophospholipid metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog) NW_004955506 4160546 4203474 - 102006798 AGCD01065326;GBDK01230748;XM_005407376;XM_013506038 XP_005407433;XP_013361492 MODEL 730469508 snorna SNORA17 Small nucleolar RNA SNORA17 8897962 protein-coding Ppip5k1 diphosphoinositol pentakisphosphate kinase 1 ENCODES a protein that exhibits 5-diphosphoinositol pentakisphosphate 1-kinase activity (ortholog); inositol hexakisphosphate 1-kinase activity (ortholog); inositol hexakisphosphate 5-kinase activity (ortholog); INVOLVED IN inositol metabolic process (ortholog); PARTICIPATES IN inositol phosphate metabolic pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955416 10074239 10113268 - 102008408 AGCD01017105;AGCD01017106;GBCB01060923;XM_005381392;XM_005381393;XM_005381402;XM_013512448;XM_013512449;XM_013512450;XM_013512451;XM_013512452;XM_013512453;XM_013512454;XM_013512455;XM_013512456 XP_005381449;XP_005381450;XP_005381459;XP_013367902;XP_013367903;XP_013367904;XP_013367905;XP_013367906;XP_013367907;XP_013367908;XP_013367909;XP_013367910 MODEL 39131850 snrna U1 U1 spliceosomal RNA 8841586 ncrna LOC102016291 uncharacterized LOC102016291 NW_004955497 3686369 3690846 - 102016291 AGCD01062552;GBDK01031764;XR_264201 MODEL 8817818 protein-coding LOC102004059 olfactory receptor 2D3-like NW_004955414 22615797 22616720 - 102004059 AGCD01015466;XM_005380178 XP_005380235 MODEL 9045863 pseudo LOC102008136 ras-related protein Rab-8B pseudogene NW_004955431 13166481 13167496 - 102008136 AGCD01030286 MODEL 8842683 protein-coding Trmt2a tRNA methyltransferase 2A ENCODES a protein that exhibits C-methyltransferase activity (ortholog); tRNA (uracil(54)-C5)-methyltransferase activity, S-adenosyl methionine-dependent (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955442 17993130 17997944 + 102023302 AGCD01037991;GBDF01088981;XM_005391731;XM_005391733 XP_005391788;XP_005391790 MODEL 8937573 protein-coding Rbm7 RNA binding motif protein 7 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); pre-mRNA intronic binding (ortholog); RNA binding (ortholog); INVOLVED IN snRNA catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN nuclear exosome targeting complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955412 15996206 16004177 + 102012747 AGCD01012888;GBDF01082376;XM_005378157;XM_005378158 XP_005378214;XP_005378215 MODEL 8829320 protein-coding Epg5 ectopic P-granules 5 autophagy tethering factor INVOLVED IN anatomical structure homeostasis (ortholog); apoptotic process (ortholog); autophagosome maturation (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN lysosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955402 31422848 31532189 - 102025742 AGCD01000788;AGCD01000789;AGCD01000790;GBDF01280540;XM_005372862;XM_013510404 XP_005372919;XP_013365858 MODEL 8756279 protein-coding Pofut4 protein O-fucosyltransferase 4 ENCODES a protein that exhibits fucosyltransferase activity (ortholog); peptide-O-fucosyltransferase activity (ortholog); INVOLVED IN N-glycan processing (ortholog); positive regulation of protein secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); stomach cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955437 18126165 18132874 - 102014710 AGCD01034775;AGCD01034776;AGCD01034777;GBDF01010401;GBDF01010402;XM_005389967 XP_005390024 MODEL 9005465 protein-coding LOC102008878 olfactory receptor 5AN1-like NW_004955511 3869171 3870109 + 102008878 AGCD01066479;XM_005408266 XP_005408323 MODEL 9014291 pseudo LOC102008506 nucleoplasmin-3 pseudogene NW_004955409 22543962 22544416 - 102008506 AGCD01010041 MODEL 626189162 snorna SNORD49 Small nucleolar RNA SNORD49 8949314 ncrna LOC102007332 uncharacterized LOC102007332 NW_004955474 9962827 10021859 - 102007332 AGCD01054580;AGCD01054581;AGCD01054582;AGCD01054583;AGCD01054584;GBDF01078385;XR_001230747 MODEL 8983508 protein-coding Prex1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); neutrophil chemotaxis (ortholog); positive regulation of cell adhesion (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); dendritic shaft (ortholog); growth cone (ortholog) NW_004955445 9229775 9401277 + 102028032 AGCD01039626;GBDI01168746;GBDI01168750;XM_013518315 XP_013373769 MODEL 9015783 protein-coding Sez6 seizure related 6 homolog INVOLVED IN adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); excitatory postsynaptic potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Childhood Schizophrenia (ortholog); esophageal cancer (ortholog); FOUND IN apical dendrite (ortholog); dendritic shaft (ortholog); dendritic spine (ortholog) NW_004955481 4175637 4220809 + 102017336 AGCD01056932;GBBH01109329;XM_005402699;XM_005402700;XM_005402701;XM_005402702;XM_013503418 XP_005402756;XP_005402757;XP_005402758;XP_005402759;XP_013358872 MODEL 8977769 protein-coding Sec24a SEC24 homolog A, COPII component ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); COPII-coated vesicle cargo loading (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN COPII vesicle coat (ortholog) NW_004955408 5803438 5850879 + 102017201 AGCD01008156;AGCD01008157;AGCD01008158;GBBH01206501;GBCQ01127382;XM_013508549 XP_013364003 MODEL 10201643 protein-coding Spata31g1 SPATA31 subfamily G member 1 NW_004958072 16 1146 + 106147709 AGCD01081468;GBCB01053674;GBDF01010963;XM_013510256 XP_013365710 MODEL 9013716 protein-coding Slc31a1 solute carrier family 31 member 1 ENCODES a protein that exhibits copper ion binding (ortholog); copper ion transmembrane transporter activity (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to cisplatin (ortholog); copper ion import (ortholog); PARTICIPATES IN cisplatin drug pathway; cisplatin response pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Congenital Abnormalities (ortholog); Embryo Loss (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); early endosome membrane (ortholog) NW_004955419 14221258 14264288 - 102027189 AGCD01020015;GBDJ01239578;XM_005382690 XP_005382747 MODEL 8739881 protein-coding Sra1 steroid receptor RNA activator 1 ENCODES a protein that exhibits nuclear androgen receptor binding (ortholog); steroid receptor RNA activator RNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN negative regulation of myoblast differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); congestive heart failure (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955418 126111 133498 + 102004386 AGCD01018668;GBDJ01085270;XM_005382026;XM_005382027 XP_005382083;XP_005382084 MODEL 8866008 pseudo LOC102022327 60S ribosomal protein L32 pseudogene NW_004955437 21682919 21683367 + 102022327 AGCD01034919 MODEL 8982980 protein-coding Tigd3 tigger transposable element derived 3 ASSOCIATED WITH stomach cancer (ortholog); urinary bladder cancer (ortholog); uveal melanoma (ortholog) NW_004955422 19880777 19883567 - 102010815 AGCD01023044;GBDF01055732;XM_005384499 XP_005384556 MODEL 9052015 ncrna LOC102011204 uncharacterized LOC102011204 NW_004955418 503166 505034 - 102011204 AGCD01018678;GBDF01041809;XR_260531 MODEL 8772282 protein-coding Pim3 Pim-3 proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to forskolin (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); melanoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955413 33068033 33071344 + 102014345 AGCD01014655;AGCD01014656;GBCB01038423;GBCE01052937;XM_013511307 XP_013366761 MODEL 730469598 snorna SNORA51 Small nucleolar RNA SNORA51 8734565 protein-coding Prss12 serine protease 12 ENCODES a protein that exhibits peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN exocytosis (ortholog); proteolysis (ortholog); zymogen activation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 1 (ortholog); brain disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); cytoplasmic vesicle (ortholog); dendrite (ortholog) NW_004955428 21574947 21644909 + 102023723 AGCD01028144;AGCD01028145;GBBH01208476;GBDF01194309;XM_013515266 XP_013370720 MODEL 8966075 protein-coding Rpsa ribosomal protein SA ENCODES a protein that exhibits DNA binding (ortholog); laminin binding (ortholog); ribosome binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cell-cell adhesion (ortholog); epithelial cell differentiation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); arrhythmogenic right ventricular dysplasia 5 (ortholog); FOUND IN basement membrane (ortholog); cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog) NW_004955420 29978160 29983544 - 102012437 AGCD01021522;AGCD01021523;AGCD01021524;GBCC01000804;GBDI01017836;XM_013513553 XP_013369007 MODEL 39133356 snorna SNORA76 Small nucleolar RNA SNORA76 39133339 snrna U4 U4 spliceosomal RNA 8717665 protein-coding Wbp11 WW domain binding protein 11 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); WW domain binding (ortholog); INVOLVED IN RNA splicing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); bicuspid aortic valve disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955413 11533303 11549067 - 102028846 AGCD01013964;GBCQ01067517;XM_005379004;XM_005379005;XM_013511645 XP_005379061;XP_005379062;XP_013367099 MODEL 8876732 ncrna LOC102019806 uncharacterized LOC102019806 NW_004955419 693667 706979 - 102019806 AGCD01019604;AGCD01019605;AGCD01019606;GBDI01249903;XR_001233563;XR_260595 MODEL 8951663 protein-coding Snx1 sorting nexin 1 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); endosomal transport (ortholog); endosome membrane tubulation (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); early endosome (ortholog) NW_004955450 11266712 11306014 - 102020402 AGCD01042653;GBDK01008578;XM_005393766;XM_013518974;XM_013518975;XM_013518976;XM_013518977;XM_013518978;XM_013518979 XP_005393823;XP_013374428;XP_013374429;XP_013374430;XP_013374431;XP_013374432;XP_013374433 MODEL 8943694 ncrna LOC102013232 uncharacterized LOC102013232 NW_004955449 2499555 2513694 - 102013232 AGCD01041828;GBDF01307257;XR_262485 MODEL 8964247 pseudo LOC102018222 ribulose-phosphate 3-epimerase-like NW_004955537 2568245 2569307 - 102018222 AGCD01070931 MODEL 8880453 protein-coding LOC102006209 uncharacterized LOC102006209 NW_004955406 38742352 38743020 + 102006209 AGCD01006609;XM_005375478 XP_005375535 MODEL 8947055 protein-coding Phactr1 phosphatase and actin regulator 1 ENCODES a protein that exhibits actin binding (ortholog); protein phosphatase 1 binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); cell motility (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); ankyloglossia (ortholog); ARTERIAL DISSECTION (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955465 1395418 1915820 - 102015389 AGCD01050338;AGCD01050339;AGCD01050340;AGCD01050341;AGCD01050342;AGCD01050343;AGCD01050344;AGCD01050345;AGCD01050346;GBBH01011676;XM_005398816 XP_005398873 MODEL 8758761 ncrna LOC102005477 uncharacterized LOC102005477 NW_004955420 14717038 14721487 + 102005477 AGCD01020954;GBBH01152513;XR_260717 MODEL 730469295 misc_rna RMST_9 Rhabdomyosarcoma 2 associated transcript conserved region 9 9042336 protein-coding LOC102003022 tubulin alpha chain-like NW_004955483 457068 458303 + 102003022 AGCD01057616;XM_013503762 XP_013359216 MODEL 8989873 protein-coding Ralgds ral guanine nucleotide dissociation stimulator ENCODES a protein that exhibits GTPase regulator activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); cervical cancer (ortholog); FOUND IN brush border (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955513 2386293 2405161 - 102006939 AGCD01066878;GBCE01096266;GBDF01128189;XM_005408411 XP_005408468 MODEL 9028373 protein-coding Rgma repulsive guidance molecule BMP co-receptor a ENCODES a protein that exhibits coreceptor activity (ortholog); signaling receptor binding (ortholog); transferrin receptor binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of collateral sprouting (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); middle cerebral artery infarction (ortholog); multiple sclerosis (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog) NW_004955416 21221023 21261831 - 102019388 AGCD01017498;AGCD01017499;AGCD01017500;GBCB01024629;GBDI01174076;XM_005381602 XP_005381659 MODEL 9044425 pseudo LOC102012045 chromobox protein homolog 3 pseudogene NW_004955402 54299108 54299688 - 102012045 AGCD01001394 MODEL 8836150 protein-coding LOC102010041 coatomer subunit gamma-2 NW_004955410 36982233 37086997 + 102010041 AGCD01011442;AGCD01011443;AGCD01011444;AGCD01011445;GBDF01004497;XM_005377554;XM_013510640 XP_005377611;XP_013366094 MODEL 8780653 protein-coding LOC102005876 mRNA cap guanine-N7 methyltransferase-like NW_004956031 668 8233 + 102005876 AGCD01078913;GBDK01394335;XM_013510216 XP_013365670 MODEL 9043631 protein-coding Prss16 serine protease 16 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endosome (ortholog); lysosome (ortholog) NW_004955465 13152701 13158411 + 102003636 AGCD01050590;AGCD01050591;GBDI01355224;XM_013521807 XP_013377261 MODEL 730468940 snorna SNORD49 Small nucleolar RNA SNORD49 8845758 protein-coding LOC102011631 solute carrier family 40 member 1-like NW_004955410 25194888 25237636 - 102011631 AGCD01011145;GBDK01125549;XM_013510582 XP_013366036 MODEL 8959710 protein-coding Ropn1l rhophilin associated tail protein 1 like ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium movement (ortholog); flagellated sperm motility (ortholog); sperm capacitation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN ciliary transition zone (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955426 285053 296913 + 102004501 AGCD01025999;GBDF01008841;XM_005386118 XP_005386175 MODEL 730469519 snorna SNORA17 Small nucleolar RNA SNORA17 9060975 protein-coding Plekha6 pleckstrin homology domain containing A6 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955406 40066260 40200629 - 102020415 AGCD01006653;AGCD01006654;GBDK01395763;XM_005375292;XM_005375295;XM_005375306;XM_013522685;XM_013522688;XM_013522690;XM_013522693;XM_013522695;XM_013522700;XM_013522703;XM_013522704;XM_013522706;XM_013522707;XM_013522709;XM_013522711;XM_013522720;XM_013522725;XM_013522731;XM_013522738;XM_013522746;XM_013522750;XM_013522753;XM_013522759;XR_001237018 XP_005375349;XP_005375352;XP_005375363;XP_013378139;XP_013378142;XP_013378144;XP_013378147;XP_013378149;XP_013378154;XP_013378157;XP_013378158;XP_013378160;XP_013378161;XP_013378163;XP_013378165;XP_013378174;XP_013378179;XP_013378185;XP_013378192;XP_013378200;XP_013378204;XP_013378207;XP_013378213 MODEL 8760446 protein-coding Spata31h1 SPATA31 subfamily H member 1 NW_004955469 9495012 9525267 + 102006899 AGCD01052504;AGCD01052505;GBDF01248600;XM_005400509 XP_005400566 MODEL 8876044 protein-coding Ppip5k2 diphosphoinositol pentakisphosphate kinase 2 ENCODES a protein that exhibits 5-diphosphoinositol pentakisphosphate 1-kinase activity (ortholog); ATP binding (ortholog); inositol hexakisphosphate 1-kinase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive nonsyndromic deafness 100 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog) NW_004955418 10822220 10898070 - 102026976 AGCD01018987;AGCD01018988;GBDF01157112;XM_005382192;XM_005382193;XM_005382195;XM_005382196;XM_005382197;XM_005382198;XM_005382199;XM_005382200;XM_005382201;XM_005382204;XM_013513002;XM_013513003;XM_013513004;XM_013513005;XM_013513006 XP_005382249;XP_005382250;XP_005382252;XP_005382253;XP_005382254;XP_005382255;XP_005382256;XP_005382257;XP_005382258;XP_005382261;XP_013368456;XP_013368457;XP_013368458;XP_013368459;XP_013368460 MODEL 9038288 ncrna LOC102010838 uncharacterized LOC102010838 NW_004955440 18922189 18925290 - 102010838 AGCD01036623;GBDF01266858;XR_262046 MODEL 8912391 protein-coding Tigd4 tigger transposable element derived 4 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); uterine carcinosarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955471 7221636 7238289 - 102028953 AGCD01053142;AGCD01053143;GBCB01089350;XM_005400910;XM_013522901;XM_013522902 XP_005400967;XP_013378355;XP_013378356 MODEL 10167908 ncrna LOC106147430 uncharacterized LOC106147430 NW_004955558 1217199 1222167 + 106147430 AGCD01073422;AGCD01073423;GBDK01433447;XR_001232334 MODEL 8852406 protein-coding Tpst1 tyrosylprotein sulfotransferase 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-tyrosine sulfotransferase activity (ortholog); INVOLVED IN post-translational protein modification (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi lumen (ortholog); Golgi membrane (ortholog) NW_004955456 8523362 8616891 + 102006316 AGCD01046488;AGCD01046489;AGCD01046490;AGCD01046491;AGCD01046492;AGCD01046493;AGCD01046494;AGCD01046495;AGCD01046496;GBBH01101451;GBDI01220614;XM_005396711;XM_005396714;XM_013520566 XP_005396768;XP_005396771;XP_013376020 MODEL 8846267 protein-coding LOC102004061 olfactory receptor 52E4-like NW_004955414 21799689 21800671 + 102004061 AGCD01015432;XM_013511735 XP_013367189 MODEL 9013244 pseudo LOC102008140 28S ribosomal protein S36, mitochondrial pseudogene NW_004955434 3982156 3983215 - 102008140 AGCD01032152 MODEL 10311755 ncrna LOC106150329 uncharacterized LOC106150329 NW_004955472 12248108 12272311 + 106150329 AGCD01053789;XR_001237073 MODEL 8728704 protein-coding Rbm8a RNA binding motif protein 8A ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); mRNA metabolic process (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); thrombocytopenia (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955568 164050 166162 + 102030678 AGCD01074504;GBDF01051815;XM_005413424 XP_005413481 MODEL 8838861 protein-coding Ptgis prostaglandin I2 synthase ENCODES a protein that exhibits heme binding (ortholog); hydroperoxy icosatetraenoate dehydratase activity (ortholog); prostaglandin-I synthase activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to estradiol stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arterial Occlusive Diseases (ortholog); atherosclerosis (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955445 8624228 8663385 + 102005315 AGCD01039608;AGCD01039609;GBCE01000913;XM_005392329 XP_005392386 MODEL 8811918 pseudo LOC102008879 protein kinase C iota type pseudogene NW_004955430 16780162 16781452 + 102008879 AGCD01029645 MODEL 8734097 protein-coding Epgn epithelial mitogen ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell surface receptor signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955474 564329 573014 + 102006240 AGCD01054223;XM_005401311;XM_013502765;XM_013502766 XP_005401368;XP_013358219;XP_013358220 MODEL 8974663 ncrna LOC102007340 uncharacterized LOC102007340 NW_004955482 6352713 6353828 - 102007340 AGCD01057386;GBDF01082671;XR_263836 MODEL 8742618 protein-coding Pogk pogo transposable element derived with KRAB domain ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955462 10075834 10089954 - 102028390 AGCD01049351;AGCD01049352;GBBH01101820;GBBH01101821;XM_005398238 XP_005398295 MODEL 8910318 ncrna LOC102008507 uncharacterized LOC102008507 NW_004955410 6953396 6959673 - 102008507 AGCD01010708;GBDF01017313;XR_259822 MODEL 730469506 snorna SNORA32 Small nucleolar RNA SNORA32 8713191 protein-coding Prex2 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); dendrite morphogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955444 11154318 11414680 - 102007377 AGCD01039035;AGCD01039036;AGCD01039037;AGCD01039038;AGCD01039039;AGCD01039040;AGCD01039041;GBCQ01125181;GBDK01093613;XM_005392120 XP_005392177 MODEL 8710588 protein-coding Sez6l seizure related 6 homolog like INVOLVED IN adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); synapse maturation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) NW_004955455 816129 992776 + 102013250 AGCD01045565;AGCD01045566;AGCD01045567;GBDF01112713;XM_005396140;XM_013520286 XP_005396197;XP_013375740 MODEL 8983235 protein-coding LOC102019452 cytochrome b reductase 1 ENCODES a protein that exhibits identical protein binding (ortholog); oxidoreductase activity, acting on metal ions (ortholog); transmembrane ascorbate ferrireductase activity (ortholog); INVOLVED IN ascorbate homeostasis (ortholog); intracellular iron ion homeostasis (ortholog); multicellular organismal-level iron ion homeostasis (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); membrane (ortholog) NW_004955449 3368976 3394405 - 102019452 AGCD01041848;AGCD01041849;AGCD01041850;AGCD01041851;GBCE01000144;XM_005393233;XM_013518792 XP_005393290;XP_013374246 MODEL 39131856 snrna U1 U1 spliceosomal RNA 9021064 protein-coding Slc31a2 solute carrier family 31 member 2 ENCODES a protein that exhibits copper ion transmembrane transporter activity (ortholog); transporter regulator activity (ortholog); INVOLVED IN copper ion import (ortholog); copper ion transmembrane transport (ortholog); copper ion transport (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); late endosome (ortholog); late endosome membrane (ortholog) NW_004955419 14332749 14343363 - 102027749 AGCD01020016;GBCQ01036886;XM_005382692 XP_005382749 MODEL 9035046 protein-coding Sec24b SEC24 homolog B, COPII component ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN COPII-coated vesicle cargo loading (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN COPII vesicle coat (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); cytosol (ortholog) NW_004955496 666728 732829 - 102026885 AGCD01062237;AGCD01062238;AGCD01062239;AGCD01062240;AGCD01062241;GBBH01127061;GBCE01024521;XM_013505418 XP_013360872 MODEL 8766446 pseudo LOC102016292 ribosomal protein S6 kinase alpha-6 pseudogene NW_004955425 3928732 3931783 - 102016292 AGCD01025303 MODEL 39131555 protein-coding PIM3 Pim-3 proto-oncogene, serine/threonine kinase 8841859 protein-coding Rnase10 ribonuclease A family member 10 (inactive) INVOLVED IN epithelial cell morphogenesis (ortholog); heterotypic cell-cell adhesion (ortholog); male gonad development (ortholog) NW_004955550 1326203 1331558 + 102026912 AGCD01072561;AGCD01072562;XM_005412067;XM_013508553 XP_005412124;XP_013364007 MODEL 730469580 snorna SNORA51 Small nucleolar RNA SNORA51 9027641 protein-coding Ralgps1 Ral GEF with PH domain and SH3 binding motif 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of Ral protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955419 1334627 1593828 - 102007341 AGCD01019647;AGCD01019648;AGCD01019649;AGCD01019650;AGCD01019651;GBDJ01260608;XM_005382439;XM_005382440;XM_005382441;XM_005382442;XM_005382443;XM_005382444;XM_005382445;XM_005382446;XM_013513184;XM_013513185 XP_005382496;XP_005382497;XP_005382498;XP_005382499;XP_005382500;XP_005382501;XP_005382502;XP_005382503;XP_013368638;XP_013368639 MODEL 626189214 snorna SNORA76 Small nucleolar RNA SNORA76 8958932 protein-coding Rgmb repulsive guidance molecule BMP co-receptor b ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell adhesion (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH lymphoma (ortholog); Prostatic Neoplasms (ortholog); rheumatoid arthritis (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); plasma membrane (ortholog) NW_004955418 14305634 14321804 - 102027979 AGCD01019071;GBCE01044704;GBDK01009283;XM_013513020 XP_013368474 MODEL 9007790 protein-coding Btnl10 Butyrophilin-like protein 10 NW_004955581 62183 69040 + 102011066 AGCD01075656;GBBH01076877;XM_005414227 XP_005414284 MODEL 39133340 snrna U4 U4 spliceosomal RNA 8927994 protein-coding Wbp1l WW domain binding protein 1 like ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN CXCL12-activated CXCR4 signaling pathway (ortholog); hemopoiesis (ortholog); positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH nevoid basal cell carcinoma syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955485 7655921 7710387 - 102011546 AGCD01058669;AGCD01058670;AGCD01058671;AGCD01058672;GBCE01054786;XM_005403823;XM_005403824;XM_013504076;XM_013504077 XP_005403880;XP_005403881;XP_013359530;XP_013359531 MODEL 8723184 ncrna LOC102004808 uncharacterized LOC102004808 NW_004955476 10982505 10987287 - 102004808 AGCD01055434;GBDF01013264;XR_263645;XR_263646 MODEL 8760196 protein-coding Rbms1 RNA binding motif single stranded interacting protein 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955449 13164306 13368011 + 102025194 AGCD01042131;AGCD01042132;AGCD01042133;AGCD01042134;GBDJ01136799;XM_005393344;XM_005393345;XM_005393346;XM_005393347;XM_005393348 XP_005393401;XP_005393402;XP_005393403;XP_005393404;XP_005393405 MODEL 8735228 protein-coding LOC102019809 histone H2B type 1 NW_004955483 913696 923492 + 102019809 AGCD01057637;GBDF01211373;XM_005403305;XM_005403306 XP_005403362;XP_005403363 MODEL 9017209 protein-coding LOC102013233 late cornified envelope protein 1A NW_004955592 591385 593007 - 102013233 AGCD01076319;GBCE01061985;XM_005414620 XP_005414677 MODEL 8923496 protein-coding LOC102018228 olfactory receptor 11G2-like NW_004955550 899553 900582 + 102018228 AGCD01072529;XM_005412040 XP_005412097 MODEL 8882764 pseudo LOC102006212 adenosine deaminase-like protein pseudogene NW_004955407 20334537 20335032 - 102006212 AGCD01007327 MODEL 8890888 protein-coding LOC102022332 uncharacterized LOC102022332 NW_004955442 5825456 5861268 - 102022332 AGCD01037570;AGCD01037571;GBBH01202596;XM_005391147;XM_013517640 XP_005391204;XP_013373094 MODEL 8917389 protein-coding Srarp steroid receptor associated and regulated protein ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); INVOLVED IN positive regulation of intracellular estrogen receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955527 2229664 2232201 - 102006605 AGCD01069425;GBCQ01152897;XM_005409853 XP_005409910 MODEL 8915463 pseudo LOC102011206 isochorismatase domain-containing protein 1 pseudogene NW_004955485 129742 131023 + 102011206 AGCD01058442;XM_005403914 MODEL 8877899 protein-coding Rptn repetin FOUND IN cornified envelope (ortholog) NW_004955589 245804 252190 + 102009443 AGCD01076159;AGCD01076160;GBDI01105484;XM_013509952 XP_013365406 MODEL 9056927 ncrna LOC102003024 uncharacterized LOC102003024 NW_004955419 21702352 21717956 + 102003024 AGCD01020282;GBDF01056389;XR_001233586;XR_001233587;XR_001233588;XR_001233589;XR_001233590;XR_001233591;XR_260649 MODEL 9011464 protein-coding Snx10 sorting nexin 10 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); ATPase binding (ortholog); INVOLVED IN bone mineralization involved in bone maturation (ortholog); bone remodeling (ortholog); bone resorption (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive osteopetrosis 8 (ortholog); cervical cancer (ortholog); FOUND IN apical cytoplasm (ortholog); centrosome (ortholog); cytosol (ortholog) NW_004955410 28137426 28178814 + 102025219 AGCD01011242;AGCD01011243;AGCD01011244;GBBH01006766;GBCQ01123481;XM_013510607 XP_013366061 MODEL 39133366 snorna SNORD5 Small nucleolar RNA SNORD5 8997435 protein-coding Prss22 serine protease 22 ENCODES a protein that exhibits peptidase activator activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955442 14618859 14623508 - 102018775 AGCD01037830;GBCE01133908;XM_005391410 XP_005391467 MODEL 8762067 protein-coding Trmt44 tRNA methyltransferase 44 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955514 2618671 2636822 - 102008970 AGCD01067085;GBBH01206510;XM_005408776 XP_005408833 MODEL 8920367 protein-coding Ptgr1 prostaglandin reductase 1 ENCODES a protein that exhibits 13-lipoxin reductase activity (ortholog); 15-oxoprostaglandin 13-reductase [NAD(P)+] activity (ortholog); 2-alkenal reductase (NADPH) activity (ortholog); INVOLVED IN leukotriene B4 metabolic process (ortholog); lipoxin A4 metabolic process (ortholog); negative regulation of positive chemotaxis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955419 15708456 15738774 + 102009949 AGCD01020087;AGCD01020088;AGCD01020089;GBDK01361003;XM_005382721;XM_005382722 XP_005382778;XP_005382779 MODEL 8849920 pseudo LOC102011632 dnaJ homolog subfamily B member 6-like NW_004955410 15884222 15890903 + 102011632 AGCD01010941 MODEL 730469138 snorna SNORA33 Small nucleolar RNA SNORA33 8947979 protein-coding Pimreg PICALM interacting mitotic regulator ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955467 11967986 11972049 + 102006114 AGCD01051621;GBDF01160170;XM_013522225 XP_013377679 MODEL 9062117 protein-coding Phactr2 phosphatase and actin regulator 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); cervical cancer (ortholog) NW_004955436 16607279 16690412 - 102007273 AGCD01033926;AGCD01033927;AGCD01033928;GBDI01173932;GBDJ01062457;XM_013516614 XP_013372068 MODEL 10131609 ncrna LOC106150330 uncharacterized LOC106150330 NW_004955472 12098041 12114855 - 106150330 AGCD01053782;AGCD01053783;AGCD01053784;GBDK01422278;XR_001237074 MODEL 8838953 protein-coding Prf1 perforin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); wide pore channel activity (ortholog); INVOLVED IN circadian rhythm (ortholog); defense response to tumor cell (ortholog); defense response to virus (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); asthma (ortholog); autistic disorder (ortholog); FOUND IN cytolytic granule (ortholog); cytoplasmic vesicle (ortholog); endosome lumen (ortholog) NW_004955437 20700912 20705076 + 102011908 AGCD01034879;AGCD01034880;GBDK01182633;XM_005390052 XP_005390109 MODEL 8966444 protein-coding Plekha7 pleckstrin homology domain containing A7 ENCODES a protein that exhibits delta-catenin binding (ortholog); INVOLVED IN cell-cell adhesion mediated by cadherin (ortholog); epithelial cell-cell adhesion (ortholog); pore complex assembly (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH angle-closure glaucoma (ortholog); Breast Cancer, Familial (ortholog); Cardiac Fibrosis (ortholog); FOUND IN cell junction (ortholog); cell-cell junction (ortholog); centrosome (ortholog) NW_004955414 31655391 31784009 - 102006236 AGCD01015759;AGCD01015760;GBCE01009822;XM_005380369;XM_013511964;XM_013511965;XM_013511966;XM_013511967 XP_005380426;XP_013367418;XP_013367419;XP_013367420;XP_013367421 MODEL 8841178 protein-coding Spata32 spermatogenesis associated 32 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955451 17896753 17907700 - 102026385 AGCD01043781;AGCD01043782;GBDF01008108;XM_005394574 XP_005394631 MODEL 8938460 protein-coding Tigd5 tigger transposable element derived 5 NW_004955454 2299244 2304795 + 102023225 AGCD01045015;GBCE01018783;XM_013520026 XP_013375480 MODEL 8747471 pseudo LOC102006216 mitochondrial calcium uniporter regulator 1 pseudogene NW_004955408 1490717 1491878 + 102006216 AGCD01007960 MODEL 8842261 pseudo LOC102008143 ras-related protein Rab-28 pseudogene NW_004955435 20586269 20586938 - 102008143 AGCD01033457 MODEL 9061651 protein-coding Tpst2 tyrosylprotein sulfotransferase 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-tyrosine sulfotransferase activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); prevention of polyspermy (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi lumen (ortholog); Golgi membrane (ortholog) NW_004955455 1106403 1128455 - 102016778 AGCD01045568;GBBH01026338;XM_013520467;XM_013520468 XP_013375921;XP_013375922 MODEL 9040354 protein-coding Prg4 proteoglycan 4 INVOLVED IN hematopoietic stem cell proliferation (ortholog); negative regulation of interleukin-6 production (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); camptodactyly-arthropathy-coxa vara-pericarditis syndrome (ortholog); FOUND IN extracellular region (ortholog) NW_004955406 24726483 24742590 + 102012278 AGCD01006207;GBDK01315861;XM_005375084;XM_005375085;XM_005375086;XM_005375087;XM_013521767 XP_005375141;XP_005375142;XP_005375143;XP_005375144;XP_013377221 MODEL 626189193 snorna SNORA76 Small nucleolar RNA SNORA76 8878591 pseudo LOC102008880 10 kDa heat shock protein, mitochondrial pseudogene NW_004955512 3112785 3135884 - 102008880 AGCD01066696 MODEL 8830555 protein-coding LOC102007346 uncharacterized LOC102007346 NW_004955491 8656799 8664951 + 102007346 AGCD01060620;GBDK01151127;XM_013504571 XP_013360025 MODEL 8968751 pseudo LOC102008511 transmembrane protein 14A pseudogene NW_004955464 11151367 11152100 - 102008511 AGCD01050137;XR_263212 MODEL 9019091 protein-coding Epha1 EPH receptor A1 ENCODES a protein that exhibits ephrin receptor activity (ortholog); fibronectin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); negative regulation of cell migration (ortholog); positive regulation of angiogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN plasma membrane (ortholog) NW_004955494 256008 268777 + 102024246 AGCD01061372;GBBH01102984;GBDI01325851;XM_005405360;XM_013504977 XP_005405417;XP_013360431 MODEL 8932661 protein-coding LOC102005483 olfactory receptor 4B1-like NW_004955422 365286 366218 - 102005483 AGCD01022404;XM_005384937 XP_005384994 MODEL 8865462 protein-coding Ror1 ROR family WNT receptor 1 ENCODES a protein that exhibits ATP binding (ortholog); signaling receptor activity (ortholog); Wnt receptor activity (ortholog); INVOLVED IN astrocyte development (ortholog); cell population proliferation (ortholog); inner ear development (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 108 (ortholog); Breast Neoplasms (ortholog); lung cancer (ortholog); FOUND IN axon terminus (ortholog); cell surface (ortholog); membrane (ortholog) NW_004955423 26029122 26274668 - 102030439 AGCD01024090;AGCD01024091;AGCD01024092;AGCD01024093;GBDJ01348699;XM_005385320;XM_013514429;XM_013514431;XM_013514432 XP_005385377;XP_013369883;XP_013369885;XP_013369886 MODEL 730469520 snorna SNORA17 Small nucleolar RNA SNORA17 39131863 snrna U1 U1 spliceosomal RNA 8804450 protein-coding LOC102019456 cytochrome c oxidase assembly protein COX11, mitochondrial INVOLVED IN ATP biosynthetic process (ortholog); intracellular monoatomic cation homeostasis (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); melanoma (ortholog); mitochondrial complex IV deficiency nuclear type 23 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955451 7635704 7642724 + 102019456 AGCD01043243;GBDF01193101;XM_005394089 XP_005394146 MODEL 8804036 protein-coding Sez6l2 seizure related 6 homolog like 2 INVOLVED IN adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); synapse maturation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); neuronal cell body (ortholog) NW_004955493 7059865 7080524 + 102004291 AGCD01061154;GBCE01082309;XM_005405222;XM_005405223;XM_013504789;XM_013504790 XP_005405279;XP_005405280;XP_013360243;XP_013360244 MODEL 8779950 protein-coding LOC102010839 cytochrome P450 2S1 ENCODES a protein that exhibits 12-hydroxyheptadecatrienoic acid synthase activity (ortholog); hydro-lyase activity (ortholog); monooxygenase activity (ortholog); INVOLVED IN icosanoid metabolic process (ortholog); prostaglandin metabolic process (ortholog); retinoic acid metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955555 167634 183572 + 102010839 AGCD01073024;GBDK01317297;XM_005412321 XP_005412378 MODEL 8918912 protein-coding Slc32a1 solute carrier family 32 member 1 ENCODES a protein that exhibits gamma-aminobutyric acid transmembrane transporter activity (ortholog); gamma-aminobutyric acid:proton antiporter activity (ortholog); glycine transmembrane transporter activity (ortholog); INVOLVED IN adult behavior (ortholog); angiogenesis (ortholog); beta-alanine transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 114 (ortholog); FOUND IN cell surface (ortholog); cell tip (ortholog); cone cell pedicle (ortholog) NW_004955445 18033128 18038002 - 102009772 AGCD01039898;XM_005392531 XP_005392588 MODEL 8865245 protein-coding LOC102022333 olfactory receptor 4K2-like NW_004955550 537881 538840 - 102022333 AGCD01072509;XM_005412133 XP_005412190 MODEL 9021298 ncrna LOC102012046 uncharacterized LOC102012046 NW_004955403 2740603 2756599 + 102012046 AGCD01001738;GBDF01080335;XR_259139 MODEL 730469523 snorna SNORA17 Small nucleolar RNA SNORA17 730469341 snorna SNORA51 Small nucleolar RNA SNORA51 8988744 protein-coding Rnase11 ribonuclease A family member 11 (inactive) ASSOCIATED WITH stomach cancer (ortholog) NW_004955550 1386452 1387057 - 102026265 AGCD01072564;XM_005412142 XP_005412199 MODEL 8875471 protein-coding LOC102010044 ribosomal large subunit pseudouridine synthase B-like NW_004955412 5260904 5261677 - 102010044 AGCD01012623;GBDF01280111;GBDF01280112;XM_013511125 XP_013366579 MODEL 8824113 pseudo LOC102011208 40S ribosomal protein S12 pseudogene NW_004955489 506441 506882 - 102011208 AGCD01059807 MODEL 10229531 protein-coding LOC106147431 cytoplasmic tRNA 2-thiolation protein 1-like NW_004955558 1391498 1394494 + 106147431 AGCD01073440;GBDJ01420841;GBDK01308643;XM_013508902 XP_013364356 MODEL 39133341 snrna U4 U4 spliceosomal RNA 8954913 protein-coding Rgn regucalcin ENCODES a protein that exhibits calcium ion binding (ortholog); gluconolactonase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); kidney development (ortholog); L-ascorbic acid biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955516 958416 978829 - 102024267 AGCD01067406;AGCD01067407;GBDI01162056;XM_005408970;XM_005408971 XP_005409027;XP_005409028 MODEL 9030246 protein-coding Ppl periplakin INVOLVED IN regulation of antibacterial peptide production (ortholog); response to mechanical stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); lateral plasma membrane (ortholog) NW_004955442 12581918 12627407 + 102029011 AGCD01037740;AGCD01037741;GBCE01133637;XM_005391258 XP_005391315 MODEL 8891322 protein-coding Snx11 sorting nexin 11 ENCODES a protein that exhibits phosphatidylinositol phosphate binding (ortholog); INVOLVED IN vesicle organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); plasma membrane (ortholog) NW_004955451 13051649 13060479 - 102008910 AGCD01043444;GBCE01136669;XM_005394248;XM_013519425;XM_013519426;XM_013519427 XP_005394305;XP_013374879;XP_013374880;XP_013374881 MODEL 9043099 protein-coding Wbp2 WW domain binding protein 2 ENCODES a protein that exhibits chromatin DNA binding (ortholog); nuclear estrogen receptor binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); establishment of protein localization to chromatin (ortholog); positive regulation of intracellular estrogen receptor signaling pathway (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 107 (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955506 6398411 6406970 + 102011685 AGCD01065420;GBDF01010035;XM_005407477;XM_013506054 XP_005407534;XP_013361508 MODEL 8954683 protein-coding Poglut1 protein O-glucosyltransferase 1 ENCODES a protein that exhibits EGF-domain serine glucosyltransferase activity (ortholog); EGF-domain serine xylosyltransferase activity (ortholog); glucosyltransferase activity (ortholog); INVOLVED IN axial mesoderm development (ortholog); circulatory system development (ortholog); muscle tissue development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2Z (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955427 19188512 19206050 + 102018417 AGCD01027359;AGCD01027360;GBDJ01299744;XM_005386444 XP_005386501 MODEL 8736772 protein-coding Rbms2 RNA binding motif single stranded interacting protein 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955458 4104124 4149120 + 102010873 AGCD01047371;AGCD01047372;AGCD01047373;AGCD01047374;AGCD01047375;AGCD01047376;AGCD01047377;AGCD01047378;AGCD01047379;GBCB01019880;XM_005397318;XM_005397319;XM_013520869;XM_013520870;XM_013520871;XM_013520872 XP_005397375;XP_005397376;XP_013376323;XP_013376324;XP_013376325;XP_013376326 MODEL 8974060 protein-coding LOC102013240 janus kinase and microtubule-interacting protein 2 NW_004956233 948 7905 - 102013240 AGCD01079289;XM_005415182 XP_005415239 MODEL 8853213 protein-coding Prickle1 prickle planar cell polarity protein 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); transcription factor binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior visceral endoderm cell migration (ortholog); aorta development (ortholog); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); autism spectrum disorder (ortholog); autosomal recessive Robinow syndrome (ortholog); FOUND IN cell trailing edge (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955500 1897899 1990791 - 102003891 AGCD01063688;AGCD01063689;AGCD01063690;AGCD01063691;GBDI01107945;XM_005406578;XM_013505663;XM_013505664 XP_005406635;XP_013361117;XP_013361118 MODEL 8947196 protein-coding LOC102018232 prostatic spermine-binding protein-like NW_004955442 14575069 14588232 - 102018232 AGCD01037827;AGCD01037828;AGCD01037829;GBDF01305030;XM_005391408;XM_005391409;XM_013517784 XP_005391465;XP_005391466;XP_013373238 MODEL 8965455 protein-coding LOC102016298 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma-like NW_004955430 7397041 7416209 + 102016298 AGCD01029349;AGCD01029350;GBDF01306804;XM_013515604;XR_001234551 XP_013371058 MODEL 8700440 protein-coding Srbd1 S1 RNA binding domain 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955441 12374940 12642295 - 102009549 AGCD01037121;AGCD01037122;AGCD01037123;AGCD01037124;AGCD01037125;AGCD01037126;AGCD01037127;AGCD01037128;AGCD01037129;AGCD01037130;AGCD01037131;GBCB01074860;XM_013517546;XM_013517547;XM_013517548;XM_013517549;XM_013517550;XM_013517551;XM_013517552 XP_013373000;XP_013373001;XP_013373002;XP_013373003;XP_013373004;XP_013373005;XP_013373006 MODEL 9048784 protein-coding Btnl2 butyrophilin like 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of T cell receptor signaling pathway (ortholog); positive regulation of interleukin-2 production (ortholog); positive regulation of T cell proliferation (ortholog); ASSOCIATED WITH berylliosis (ortholog); coronary artery disease (ortholog); Graves' disease (ortholog); FOUND IN membrane (ortholog) NW_004955437 1084330 1101751 - 102018528 AGCD01034189;GBDJ01214554;XM_005389446;XM_005389447;XM_005389448 XP_005389503;XP_005389504;XP_005389505 MODEL 8865512 pseudo LOC102004812 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955416 26864290 26864700 - 102004812 AGCD01017606 MODEL 8837161 protein-coding Ralgps2 Ral GEF with PH domain and SH3 binding motif 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955406 18161587 18267737 + 102026072 AGCD01006023;AGCD01006024;AGCD01006025;GBDK01430642;GBDK01430645;XM_005374939 XP_005374996 MODEL 8948396 pseudo LOC102019812 heterogeneous nuclear ribonucleoprotein A3 pseudogene NW_004955419 17724461 17726292 - 102019812 AGCD01020163 MODEL 730469347 snorna SNORD50 Small nucleolar RNA SNORD50 8770272 pseudo LOC102007347 heterogeneous nuclear ribonucleoprotein A1-like 2 NW_004955494 2464464 2465407 + 102007347 AGCD01061438 MODEL 8717195 ncrna LOC102008881 uncharacterized LOC102008881 NW_004955520 1038221 1056799 - 102008881 AGCD01068041;AGCD01068042;GBDF01278076;XR_264581 MODEL 730469353 snorna SNORA33 Small nucleolar RNA SNORA33 8764864 protein-coding LOC102005878 RNA-binding protein NOB1-like NW_004957102 190 886 + 102005878 AGCD01080498;XM_005415224 XP_005415281 MODEL 8914164 protein-coding Trmt5 tRNA methyltransferase 5 INVOLVED IN mitochondrial tRNA methylation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 26 (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955466 8679795 8690203 + 102014123 AGCD01050997;GBBH01052220;XM_005399167;XM_013521928;XM_013521929;XM_013521930;XM_013521931 XP_005399224;XP_013377382;XP_013377383;XP_013377384;XP_013377385 MODEL 8952658 protein-coding Phactr3 phosphatase and actin regulator 3 ENCODES a protein that exhibits actin binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955528 3894294 4041621 - 102008253 AGCD01069613;AGCD01069614;AGCD01069615;AGCD01069616;GBDJ01097569;XM_005410046 XP_005410103 MODEL 8969917 ncrna LOC102004063 uncharacterized LOC102004063 NW_004955472 11452010 11467899 - 102004063 AGCD01053756;GBBH01126775;XR_001237068;XR_001237069;XR_263569;XR_263571 MODEL 8775370 ncrna LOC102019457 uncharacterized LOC102019457 NW_004955676 10316 15752 - 102019457 AGCD01077974;AGCD01077975;GBCE01027582;XR_265182 MODEL 8737328 protein-coding Rptor regulatory associated protein of MTOR complex 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); enzyme-substrate adaptor activity (ortholog); protein kinase activator activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to glucose stimulus (ortholog); cellular response to L-leucine (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955506 2009422 2401775 - 102016498 AGCD01065287;AGCD01065288;AGCD01065289;AGCD01065290;AGCD01065291;AGCD01065292;AGCD01065293;AGCD01065294;GBCB01097652;XM_005407317;XM_005407318;XM_013506089 XP_005407374;XP_005407375;XP_013361543 MODEL 8897789 pseudo LOC102003025 splicing factor 3A subunit 1-like NW_004955419 15519929 15520421 + 102003025 AGCD01020083 MODEL 8870043 protein-coding Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); cis-trans isomerase activity (ortholog); cytoskeletal motor activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); microtubule polymerization (ortholog); negative regulation of amyloid-beta formation (ortholog); PARTICIPATES IN altered p53 signaling pathway; p53 signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); Breast Neoplasms (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955495 1250557 1261617 + 102025700 AGCD01061678;GBDF01008372;XM_005405574;XM_013505361 XP_005405631;XP_013360815 MODEL 8740356 protein-coding LOC102010840 serine protease 29-like NW_004955442 15998729 16000624 + 102010840 AGCD01037890;GBBH01115240;XM_005391588 XP_005391645 MODEL 730469101 snorna SNORA51 Small nucleolar RNA SNORA51 9004566 protein-coding Tigit T cell immunoreceptor with Ig and ITIM domains ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN negative regulation of interleukin-12 production (ortholog); negative regulation of natural killer cell mediated cytotoxicity (ortholog); negative regulation of T cell activation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955427 14358326 14381074 + 102009969 AGCD01027271;GBBH01008722;XM_005386413 XP_005386470 MODEL 8993255 pseudo LOC102006218 attractin pseudogene NW_004955458 8263305 8377868 - 102006218 AGCD01047602;AGCD01047603;AGCD01047604 MODEL 8926148 pseudo LOC102008145 kinesin-associated protein 3 pseudogene NW_004955436 21887648 21900523 - 102008145 AGCD01034080 MODEL 730469424 snorna SNORA77 Small nucleolar RNA SNORA77 39133230 snrna U4 U4 spliceosomal RNA 8760468 protein-coding Prss23 serine protease 23 ASSOCIATED WITH COVID-19 (ortholog); exudative vitreoretinopathy 1 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955414 6202383 6213521 - 102007985 AGCD01014913;AGCD01014914;GBCQ01178355;XM_005379735;XM_005379736 XP_005379792;XP_005379793 MODEL 8857193 protein-coding Ptgr2 prostaglandin reductase 2 ENCODES a protein that exhibits 15-oxoprostaglandin 13-reductase [NAD(P)+] activity (ortholog); zinc ion binding (ortholog); INVOLVED IN prostaglandin metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955523 1519767 1549998 - 102024499 AGCD01068523;AGCD01068524;AGCD01068525;GBCQ01000257;XM_005409413 XP_005409470 MODEL 8776978 protein-coding LOC102008514 putative olfactory receptor 2B8 NW_004955465 13513122 13518306 - 102008514 AGCD01050613;GBDF01256300;XM_005398955;XM_013521794;XM_013521795 XP_005399012;XP_013377248;XP_013377249 MODEL 39131869 snrna U1 U1 spliceosomal RNA 8977656 protein-coding Epha10 EPH receptor A10 ENCODES a protein that exhibits ATP binding (ortholog); transmembrane-ephrin receptor activity (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 88 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955452 15510054 15547769 - 102014005 AGCD01044486;AGCD01044487;GBDF01009991;XM_013519462 XP_013374916 MODEL 730469524 snorna SNORA17 Small nucleolar RNA SNORA17 8789550 protein-coding Rnase12 ribonuclease A family member 12 (inactive) NW_004955550 1399335 1400310 - 102027235 AGCD01072565;XM_005412068 XP_005412125 MODEL 8714102 protein-coding Spata33 spermatogenesis associated 33 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN fertilization (ortholog); flagellated sperm motility (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955541 3223552 3232837 + 102012026 AGCD01071440;GBDI01027080;XM_005411046;XM_005411047;XM_013507946 XP_005411103;XP_005411104;XP_013363400 MODEL 8726679 pseudo LOC102010047 nucleolar and spindle-associated protein 1 pseudogene NW_004955413 13435713 13437079 - 102010047 AGCD01014015 MODEL 8957270 protein-coding Sec24c SEC24 homolog C, COPII component ENCODES a protein that exhibits cargo adaptor activity (ortholog); SNARE binding (ortholog); zinc ion binding (ortholog); INVOLVED IN COPII-coated vesicle cargo loading (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN COPII vesicle coat (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955437 18132969 18161167 - 102013540 AGCD01034777;GBCE01076831;XM_005389963;XM_005389964;XM_005389965 XP_005390020;XP_005390021;XP_005390022 MODEL 8842486 pseudo LOC102013244 tetraspanin-7-like NW_004955452 10222211 10222773 - 102013244 AGCD01044271 MODEL 10352396 protein-coding LOC106147434 kallikrein-4-like NW_004955559 28145 63909 + 106147434 AGCD01073534;AGCD01073535;AGCD01073536;AGCD01073537;AGCD01073538;AGCD01073539;AGCD01073540;XM_013508938 XP_013364392 MODEL 8837143 protein-coding Raly RALY heterogeneous nuclear ribonucleoprotein ENCODES a protein that exhibits identical protein binding (ortholog); RNA binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 27269167 27360224 - 102025699 AGCD01023317;AGCD01023318;AGCD01023319;GBCQ01050320;XM_005384836;XM_005384837;XM_013514160;XM_013514161;XM_013514162 XP_005384893;XP_005384894;XP_013369614;XP_013369615;XP_013369616 MODEL 626189205 snorna SNORD50 Small nucleolar RNA SNORD50 730469266 snorna SNORA77 Small nucleolar RNA SNORA77 8905429 protein-coding Wbp2nl WBP2 N-terminal like INVOLVED IN regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN perinuclear theca (ortholog); sperm flagellum (ortholog); sperm head (ortholog) NW_004955413 27402614 27442106 + 102030406 AGCD01014504;AGCD01014505;AGCD01014506;AGCD01014507;GBDF01123498;XM_005379389;XM_005379391;XM_005379392;XM_005379393;XM_005379394 XP_005379446;XP_005379448;XP_005379449;XP_005379450;XP_005379451 MODEL 8700974 pseudo LOC102005496 probable ATP-dependent RNA helicase DDX41 pseudogene NW_004955433 1844022 1845319 - 102005496 AGCD01031371 MODEL 730469599 snorna SNORA33 Small nucleolar RNA SNORA33 8700689 protein-coding Slc33a1 solute carrier family 33 member 1 ENCODES a protein that exhibits acetyl-CoA transmembrane transporter activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acetyl-CoA transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cataract (ortholog); colorectal cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955448 6885153 6905641 - 102016652 AGCD01041396;GBDI01172474;XM_005393070;XM_005393071 XP_005393127;XP_005393128 MODEL 8976262 protein-coding Plekha8 pleckstrin homology domain containing A8 ENCODES a protein that exhibits ceramide binding (ortholog); cerebroside transfer activity (ortholog); glycolipid binding (ortholog); INVOLVED IN ER to Golgi ceramide transport (ortholog); globoside biosynthetic process (ortholog); glycolipid transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cis-Golgi network membrane (ortholog); nucleoplasm (ortholog); trans-Golgi network (ortholog) NW_004955410 31327015 31386671 + 102017751 AGCD01011321;AGCD01011322;AGCD01011323;GBDF01087012;XM_005377490;XM_013510617 XP_005377547;XP_013366071 MODEL 8972506 protein-coding Phactr4 phosphatase and actin regulator 4 ENCODES a protein that exhibits actin binding (ortholog); protein phosphatase 1 binding (ortholog); protein phosphatase activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); closure of optic fissure (ortholog); enteric nervous system development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN lamellipodium (ortholog) NW_004955452 7505647 7593302 + 102015916 AGCD01044166;AGCD01044167;AGCD01044168;AGCD01044169;AGCD01044170;AGCD01044171;AGCD01044172;AGCD01044173;AGCD01044174;GBBH01106810;XM_005394951;XM_005394953;XM_005394954;XM_013519485;XM_013519486;XM_013519487;XM_013519488 XP_005395008;XP_005395010;XP_005395011;XP_013374939;XP_013374940;XP_013374941;XP_013374942 MODEL 8934727 protein-coding Tpx2 TPX2 microtubule nucleation factor ENCODES a protein that exhibits importin-alpha family protein binding (ortholog); molecular adaptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN microtubule nucleation (ortholog); mitotic spindle assembly (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN axon hillock (ortholog); intercellular bridge (ortholog); microtubule cytoskeleton (ortholog) NW_004955422 29170695 29233924 - 102014064 AGCD01023379;AGCD01023380;AGCD01023381;AGCD01023382;AGCD01023383;GBBH01149736;XM_005384887;XM_005384888;XM_005384889;XM_005384890;XM_005384891;XM_005384892;XM_013514186;XM_013514187;XM_013514188;XM_013514190 XP_005384944;XP_005384945;XP_005384946;XP_005384947;XP_005384948;XP_005384949;XP_013369640;XP_013369641;XP_013369642;XP_013369644 MODEL 8717841 gene LOC102010841 Ig lambda-2 chain C regions-like NW_004955442 17155684 17169023 - 102010841 AGCD01037943;AGCD01037944;XM_005391686;XM_005391687 MODEL 8955310 pseudo LOC102016300 olfactory receptor 8H1-like NW_004955511 5052990 5060089 + 102016300 AGCD01066545;AGCD01066546 MODEL 9019350 protein-coding LOC102011211 cationic trypsin-3-like NW_004955494 1248108 1252850 + 102011211 AGCD01061393;XM_005405394 XP_005405451 MODEL 8827232 protein-coding Pin4 peptidylprolyl cis/trans isomerase, NIMA-interacting 4 ENCODES a protein that exhibits bent DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN rRNA processing (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); nucleolus (ortholog) NW_004955475 11563379 11577133 + 102013078 AGCD01055156;AGCD01055157;AGCD01055158;GBDI01136207;XM_005401685 XP_005401742 MODEL 8870238 protein-coding Src SRC proto-oncogene, non-receptor tyrosine kinase ENCODES a protein that exhibits BMP receptor binding (ortholog); cell adhesion molecule binding (ortholog); connexin binding (ortholog); INVOLVED IN positive regulation of outer hair cell apoptotic process; adherens junction organization (ortholog); angiotensin-activated signaling pathway (ortholog); PARTICIPATES IN altered Reelin signaling pathway; dopamine signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH Hearing Loss, Noise-Induced; sensorineural hearing loss; allergic disease (ortholog); FOUND IN actin filament (ortholog); anchoring junction (ortholog); axon (ortholog) NW_004955445 19213210 19227670 - 102006840 AGCD01039914;GBCB01079160;GBCE01077842;XM_013518348 XP_013373802 MODEL 730469267 snorna SNORA51 Small nucleolar RNA SNORA51 9046707 protein-coding Btnl9 butyrophilin like 9 ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog) NW_004955530 263915 284368 - 102011359 AGCD01069836;AGCD01069837;AGCD01069838;GBDI01324980;XM_005410120;XM_013507547 XP_005410177;XP_013363001 MODEL 8704269 protein-coding Rnase13 ribonuclease A family member 13 (inactive) NW_004955550 1786550 1800191 - 102005753 AGCD01072588;GBCB01100056;XM_005412091;XM_005412093;XM_005412094 XP_005412148;XP_005412150;XP_005412151 MODEL 8773479 ncrna LOC102011636 uncharacterized LOC102011636 NW_004955412 12761973 12776122 - 102011636 AGCD01012825;GBDF01277129;XR_001232873 MODEL 9059698 protein-coding Snx12 sorting nexin 12 ENCODES a protein that exhibits enzyme binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN negative regulation of early endosome to late endosome transport (ortholog); negative regulation of gene expression (ortholog); negative regulation of protein catabolic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); FOUND IN early endosome (ortholog) NW_004955475 10632938 10641452 - 102027521 AGCD01055105;GBCE01118453;XM_005401637 XP_005401694 MODEL 8991063 protein-coding Ppm1a protein phosphatase, Mg2+/Mn2+ dependent 1A ENCODES a protein that exhibits calmodulin-dependent protein phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); neuron projection (ortholog) NW_004955466 9315227 9331213 - 102018273 AGCD01051034;GBCQ01042357;GBDF01218126;XM_013521996 XP_013377450 MODEL 8872143 protein-coding Ror2 ROR family WNT receptor 2 ENCODES a protein that exhibits frizzled binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN astrocyte development (ortholog); BMP signaling pathway (ortholog); bone mineralization (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); autosomal recessive Robinow syndrome (ortholog); brachydactyly (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955515 313612 554751 + 102012231 AGCD01067197;AGCD01067198;AGCD01067199;AGCD01067200;AGCD01067201;AGCD01067202;AGCD01067203;GBCE01034116;XM_005408865;XM_005408866 XP_005408922;XP_005408923 MODEL 8741484 ncrna LOC102008892 uncharacterized LOC102008892 NW_004955439 2679785 2686659 - 102008892 AGCD01035657;GBDF01185074;XR_261968 MODEL 8810815 protein-coding Rbms3 RNA binding motif single stranded interacting protein 3 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); poly(A) binding (ortholog); INVOLVED IN defense response to tumor cell (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955430 20714647 21394049 + 102020364 AGCD01029751;AGCD01029752;AGCD01029753;AGCD01029754;AGCD01029755;AGCD01029756;AGCD01029757;AGCD01029758;AGCD01029759;AGCD01029760;AGCD01029761;AGCD01029762;AGCD01029763;AGCD01029764;AGCD01029765;GBCB01027277;XM_005387516;XM_013515627;XM_013515628;XM_013515629;XM_013515630;XM_013515631 XP_005387573;XP_013371081;XP_013371082;XP_013371083;XP_013371084;XP_013371085 MODEL 8927679 pseudo LOC102018233 heat shock cognate 71 kDa protein pseudogene NW_004955557 808259 809210 + 102018233 AGCD01073262 MODEL 8784587 protein-coding Prickle2 prickle planar cell polarity protein 2 INVOLVED IN blastocyst formation (ortholog); embryonic brain development (ortholog); establishment or maintenance of epithelial cell apical/basal polarity (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); autosomal dominant intellectual developmental disorder (ortholog); dyslexia (ortholog); FOUND IN apicolateral plasma membrane (ortholog); axon (ortholog); axon initial segment (ortholog) NW_004955517 1501322 1806996 + 102017152 AGCD01067600;AGCD01067601;AGCD01067602;AGCD01067603;AGCD01067604;AGCD01067605;AGCD01067606;AGCD01067607;GBBH01037181;GBBH01037182;XM_013506943 XP_013362397 MODEL 9061509 protein-coding Wbp4 WW domain binding protein 4 ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN mRNA cis splicing, via spliceosome (ortholog); mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955404 51046245 51094245 + 102011395 AGCD01004543;AGCD01004544;AGCD01004545;AGCD01004546;AGCD01004547;GBBH01214258;GBCE01024729;XM_013516774;XM_013516775 XP_013372228;XP_013372229 MODEL 8826170 protein-coding LOC102022334 zinc finger protein 227 NW_004955555 1633022 1640505 + 102022334 AGCD01073093;AGCD01073094;AGCD01073095;GBDF01014099;GBDJ01402956;XM_005412461 XP_005412518 MODEL 8973101 protein-coding LOC102012047 PRAME family member 9/15-like NW_004955618 227974 229557 - 102012047 AGCD01077320;XM_013510149 XP_013365603 MODEL 8927884 pseudo LOC102004065 ribonuclease UK114-like NW_004955474 6358259 6358744 - 102004065 AGCD01054474 MODEL 8842186 protein-coding LOC102005879 keratin, type I cytoskeletal 42-like NW_004955451 15945587 15951095 - 102005879 AGCD01043641;GBBH01099405;XM_005394414 XP_005394471 MODEL 8832505 protein-coding LOC102019458 disintegrin and metalloproteinase domain-containing protein 21-like NW_004955403 32154362 32157844 - 102019458 AGCD01002431;GBDK01304845;XM_005373526 XP_005373583 MODEL 8910156 protein-coding LOC102003026 uncharacterized LOC102003026 NW_004955485 9190059 9193837 + 102003026 AGCD01058751;AGCD01058752;GBDF01251522;XM_013504053 XP_013359507 MODEL 9027605 protein-coding Poglut2 protein O-glucosyltransferase 2 ENCODES a protein that exhibits EGF-domain serine glucosyltransferase activity (ortholog); EGF-domain serine xylosyltransferase activity (ortholog); UDP-glucosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via glucose (ortholog); protein O-linked glycosylation via xylose (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); nucleoplasm (ortholog) NW_004955404 8358542 8374216 + 102030378 AGCD01003351;GBDJ01275469;XM_005374028 XP_005374085 MODEL 8797418 pseudo LOC102004813 40S ribosomal protein S2-like NW_004955416 5201588 5210682 + 102004813 AGCD01016904 MODEL 8908472 protein-coding Spata4 spermatogenesis associated 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955403 31548696 31558177 + 102018550 AGCD01002421;GBDF01010895;XM_005373523;XM_013513215 XP_005373580;XP_013368669 MODEL 8787657 protein-coding Timcc TIM double twin CX3C motif chaperone ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); Meniere's disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955424 14837264 14841354 + 102005819 AGCD01024660;GBBH01228913;XM_005385615 XP_005385672 MODEL 8979146 protein-coding LOC102007351 melanoma-associated antigen 10-like NW_004955498 6985853 6996187 - 102007351 AGCD01063140;XM_005406439 XP_005406496 MODEL 8788169 protein-coding Sf1 splicing factor 1 ENCODES a protein that exhibits identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN Leydig cell differentiation (ortholog); male sex determination (ortholog); negative regulation of smooth muscle cell proliferation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); Enuresis (ortholog); esophageal cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); spliceosomal complex (ortholog) NW_004955422 20391340 20406555 + 102028550 AGCD01023078;AGCD01023079;GBCE01029052;GBDI01001163;XM_013514043;XM_013514044;XM_013514045;XM_013514046 XP_013369497;XP_013369498;XP_013369499;XP_013369500 MODEL 616940618 snorna SNORD51 Small nucleolar RNA SNORD51 8747119 ncrna LOC102019813 uncharacterized LOC102019813 NW_004955420 18957081 18961026 + 102019813 AGCD01021053;GBDF01176261;XR_260721;XR_260722 MODEL 8815151 protein-coding Trmt6 tRNA methyltransferase 6 non-catalytic subunit INVOLVED IN mRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); tRNA (m1A) methyltransferase complex (ortholog) NW_004955415 16333766 16390112 - 102016916 AGCD01016376;AGCD01016377;AGCD01016378;AGCD01016379;GBCQ01122321;XM_005380851;XM_005380852;XM_013512262 XP_005380908;XP_005380909;XP_013367716 MODEL 8957090 ncrna LOC102005498 uncharacterized LOC102005498 NW_004955522 4121118 4127681 - 102005498 AGCD01068413;GBDF01226154;XR_001231895;XR_264630 MODEL 10297477 ncrna LOC106150331 uncharacterized LOC106150331 NW_004955472 2263418 2269139 + 106150331 AGCD01053450;GBBH01162786;XR_001237076;XR_001237077 MODEL 39131875 snrna U1 U1 spliceosomal RNA 8999334 protein-coding Epha2 EPH receptor A2 ENCODES a protein that exhibits ephrin receptor activity (ortholog); growth factor binding (ortholog); molecular function activator activity (ortholog); INVOLVED IN axial mesoderm formation (ortholog); blood vessel development (ortholog); blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cataract 6 multiple types (ortholog); cervical cancer (ortholog); FOUND IN cell junction (ortholog); cell surface (ortholog); focal adhesion (ortholog) NW_004955527 2120447 2151932 + 102004197 AGCD01069422;AGCD01069423;GBDI01327302;XM_005409845 XP_005409902 MODEL 8966735 protein-coding Plekhb1 pleckstrin homology domain containing B1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN regulation of cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN membrane (ortholog) NW_004955414 17826812 17840988 - 102014039 AGCD01015256;GBDI01000683;XM_005379942;XM_005379943;XM_005379944;XM_005379945;XM_005379946;XM_005379947 XP_005379999;XP_005380000;XP_005380001;XP_005380002;XP_005380003;XP_005380004 MODEL 8893105 protein-coding Tra2a transformer 2 alpha homolog ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955410 25759649 25784128 - 102015297 AGCD01011173;AGCD01011174;GBDJ01001545;XM_005377400 XP_005377457 MODEL 8749384 protein-coding Sec24d SEC24 homolog D, COPII component ENCODES a protein that exhibits SNARE binding (ortholog); zinc ion binding (ortholog); INVOLVED IN COPII-coated vesicle cargo loading (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bone structure disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN COPII vesicle coat (ortholog) NW_004955428 21381809 21475329 + 102024827 AGCD01028137;AGCD01028138;GBDI01076509;XM_013515264;XM_013515265 XP_013370718;XP_013370719 MODEL 8744163 protein-coding LOC102010049 olfactory receptor 52H1-like NW_004955414 21628748 21631134 + 102010049 AGCD01015424;XM_005380100 XP_005380157 MODEL 8924612 protein-coding Ptgr3 prostaglandin reductase 3 ENCODES a protein that exhibits 15-oxoprostaglandin 13-reductase [NAD(P)+] activity (ortholog); INVOLVED IN negative regulation of fat cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) NW_004955402 58634433 58642498 - 102014848 AGCD01001535;AGCD01001536;AGCD01001537;GBBH01187216;GBCQ01006883;XM_005373085 XP_005373142 MODEL 9032403 protein-coding Rpusd1 RNA pseudouridine synthase domain containing 1 ENCODES a protein that exhibits tRNA pseudouridine synthase activity (ortholog); INVOLVED IN tRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); prostate cancer (ortholog); sarcoma (ortholog) NW_004955442 16423526 16426623 + 102014183 AGCD01037900;GBBH01006331;XM_005391598;XM_005391599 XP_005391655;XP_005391656 MODEL 8766278 pseudo LOC102008146 DNA damage-regulated autophagy modulator protein 1 pseudogene NW_004955536 576531 579612 - 102008146 AGCD01070732 MODEL 8745538 pseudo LOC102013247 transmembrane protein 216-like NW_004955453 14243472 14246662 + 102013247 AGCD01044860 MODEL 39133232 snrna U4 U4 spliceosomal RNA 10093929 protein-coding LOC106147435 uncharacterized LOC106147435 NW_004955559 778019 780705 - 106147435 AGCD01073611;GBCQ01075670;XM_013508944 XP_013364398 MODEL 730469225 snorna SNORA79 Small nucleolar RNA SNORA79 8870865 protein-coding Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ENCODES a protein that exhibits beta-catenin binding (ortholog); protein phosphorylated amino acid binding (ortholog); ubiquitin ligase activator activity (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); mammary gland epithelial cell proliferation (ortholog); negative regulation of smoothened signaling pathway (ortholog); PARTICIPATES IN Hedgehog signaling pathway; nuclear factor kappa B signaling pathway; nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) NW_004955485 8724375 8846647 - 102026749 AGCD01058727;AGCD01058728;GBCB01021435;XM_005403874;XM_005403876;XM_005403877;XM_013504108;XM_013504109 XP_005403931;XP_005403933;XP_005403934;XP_013359562;XP_013359563 MODEL 9014131 protein-coding Ralyl RALY RNA binding protein like ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955417 2123050 2747906 + 102025909 AGCD01017870;AGCD01017871;AGCD01017872;AGCD01017873;AGCD01017874;AGCD01017875;AGCD01017876;AGCD01017877;AGCD01017878;AGCD01017879;AGCD01017880;AGCD01017881;AGCD01017882;GBDI01355838;XM_005381724;XM_005381725;XM_005381727;XM_013512855;XM_013512856 XP_005381781;XP_005381782;XP_005381784;XP_013368309;XP_013368310 MODEL 8892147 protein-coding Rgp1 RGP1 partner of RAB6A GEF complex ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of protein catabolic process (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); protein-containing complex (ortholog) NW_004955472 550198 554038 - 102009375 AGCD01053340;GBBH01207777;GBDK01228476;XM_005401008 XP_005401065 MODEL 730469532 snorna SNORA17 Small nucleolar RNA SNORA17 8951046 pseudo LOC102022339 RING-box protein 2 pseudogene NW_004955563 1440099 1440434 - 102022339 AGCD01074147 MODEL 9021380 protein-coding LOC102016302 multidrug resistance protein 1-like NW_004955432 4797562 4881240 - 102016302 AGCD01030745;GBDJ01142870;GBDJ01181385;XM_013516023 XP_013371477 MODEL 9065582 ncrna LOC102006219 uncharacterized LOC102006219 NW_004955409 9811332 9815400 - 102006219 AGCD01009449;GBDF01214479;XR_259763 MODEL 9043098 pseudo LOC102011212 rRNA-processing protein FCF1 homolog pseudogene NW_004955494 5808071 5843724 - 102011212 AGCD01061526 MODEL 730468939 misc_rna Pinc Pregnancy induced noncoding RNA 9012504 pseudo LOC102011641 uracil-DNA glycosylase pseudogene NW_004955413 26353261 26357509 - 102011641 AGCD01014435;XM_005379326;XM_005379327 MODEL 8807614 protein-coding Srcap Snf2 related CREBBP activator protein ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent chromatin remodeler activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cAMP/PKA signal transduction (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Ataxia (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955493 7554724 7602560 + 102019075 AGCD01061202;AGCD01061203;AGCD01061204;AGCD01061205;GBDI01117388;XM_005405271;XM_005405272 XP_005405328;XP_005405329 MODEL 8703767 protein-coding LOC102010843 kallikrein-2-like NW_004955559 416199 433647 - 102010843 AGCD01073584;AGCD01073585;AGCD01073586;GBDJ01062263;GBDJ01062266;XM_005412758 XP_005412815 MODEL 8718409 ncrna LOC102008515 uncharacterized LOC102008515 NW_004955412 14935574 14945274 - 102008515 AGCD01012863;GBCQ01079249;XR_259995 MODEL 9065200 protein-coding Timd4 T cell immunoglobulin and mucin domain containing 4 ENCODES a protein that exhibits phosphatidylserine binding (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955408 10969413 10998042 - 102019476 AGCD01008280;AGCD01008281;AGCD01008282;GBBH01126834;XM_013506889;XM_013506895;XM_013506900 XP_013362343;XP_013362349;XP_013362354 MODEL 8979167 pseudo LOC102008893 60S ribosomal protein L17 pseudogene NW_004955439 18545099 18545654 + 102008893 AGCD01036056 MODEL 9005586 protein-coding Rora RAR related orphan receptor A ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to hypoxia (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); allergic rhinitis (ortholog); autistic disorder (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955450 14262199 14434611 + 102012265 AGCD01042742;AGCD01042743;AGCD01042744;GBBH01203002;XM_013518925;XM_013518926;XM_013518928 XP_013374379;XP_013374380;XP_013374382 MODEL 9024076 protein-coding Rbmx RNA binding motif protein X-linked ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); membrane protein ectodomain proteolysis (ortholog); mRNA splice site recognition (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); euchromatin (ortholog); extracellular exosome (ortholog) NW_004955489 8280842 8286252 + 102010494 AGCD01060013;GBCE01001763;XM_013504493 XP_013359947 MODEL 8872891 protein-coding Slc33a2 solute carrier family 33 member 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955454 3132761 3139501 + 102013248 AGCD01045057;GBDI01264546;XM_005395914;XM_005395915;XM_005395916;XM_005395917;XM_013520084 XP_005395971;XP_005395972;XP_005395973;XP_005395974;XP_013375538 MODEL 8827360 ncrna LOC102018234 uncharacterized LOC102018234 NW_004955443 19101620 19119702 - 102018234 AGCD01038619;GBDF01262552;XR_262213 MODEL 730469449 snorna SNORA33 Small nucleolar RNA SNORA33 8700541 protein-coding Prickle3 prickle planar cell polarity protein 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Leber hereditary optic neuropathy (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955543 662438 673386 - 102010947 AGCD01071598;GBBH01101699;XM_005411332 XP_005411389 MODEL 8773316 protein-coding Wdcp WD repeat and coiled coil containing ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN protein complex oligomerization (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog) NW_004955469 6236653 6261753 - 102023140 AGCD01052374;AGCD01052375;GBCE01018761;XM_005400370;XM_005400371 XP_005400427;XP_005400428 MODEL 10280226 protein-coding LOC106150332 translation initiation factor IF-2-like NW_004955472 676479 677848 - 106150332 AGCD01053347;GBDF01008219;XM_013522958 XP_013378412 MODEL 8792308 pseudo LOC102005500 sorting nexin-2 pseudogene NW_004955434 22965591 22967140 - 102005500 AGCD01032690 MODEL 8855936 pseudo LOC102005881 solute carrier family 35 member E3-like NW_004955451 2883147 2889213 - 102005881 AGCD01043026 MODEL 8994994 pseudo LOC102012048 60S ribosomal protein L12-like NW_004955403 50676234 50697887 - 102012048 AGCD01002969 MODEL 8805499 protein-coding Ppm1b protein phosphatase, Mg2+/Mn2+ dependent 1B ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of defense response to virus (ortholog); negative regulation of interferon-beta production (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hypotonia-cystinuria syndrome (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955441 11276525 11338586 + 102029903 AGCD01037107;GBDF01043427;GBDF01043428;XM_005390941 XP_005390998 MODEL 8764806 protein-coding LOC102004074 uncharacterized LOC102004074 NW_004955420 23886315 23891242 - 102004074 AGCD01021263;AGCD01021264;GBDF01041126;XM_005383365;XM_013513352;XR_001233671;XR_001233672 XP_005383422;XP_013368806 MODEL 8746796 pseudo LOC102003030 high mobility group protein B2 pseudogene NW_004955420 23360748 23364378 - 102003030 AGCD01021245 MODEL 730469035 snorna SNORA51 Small nucleolar RNA SNORA51 8903718 protein-coding Rnase6 ribonuclease A family member 6 ENCODES a protein that exhibits RNA nuclease activity (ortholog); INVOLVED IN antibacterial humoral response (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to Gram-negative bacterium (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); liver disease (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); extracellular region (ortholog) NW_004955550 1687068 1688160 - 102029125 AGCD01072584;GBCE01001207;XM_005412074 XP_005412131 MODEL 8767633 protein-coding LOC102004820 olfactory receptor 13C9 NW_004955419 21786853 21787806 + 102004820 AGCD01020283;XM_005382787 XP_005382844 MODEL 8744817 pseudo LOC102010056 protein FAM136A-like NW_004955416 11217210 11218822 - 102010056 AGCD01017181 MODEL 8929632 protein-coding Prss27 serine protease 27 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955442 14636739 14656877 + 102019113 AGCD01037831;AGCD01037832;GBDF01127689;XM_005391411;XM_005391413;XM_005391415 XP_005391468;XP_005391470;XP_005391472 MODEL 8831291 pseudo LOC102007353 60S ribosomal protein L31 pseudogene NW_004955426 12943982 12944411 + 102007353 AGCD01026352 MODEL 39133233 snrna U4 U4 spliceosomal RNA 8930779 protein-coding Snx13 sorting nexin 13 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); PARTICIPATES IN epinephrine signaling pathway via adrenergic receptor beta; G protein mediated signaling pathway via Galphas family; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog) NW_004955410 20792659 20925907 - 102024195 AGCD01011052;AGCD01011053;AGCD01011054;GBCE01070030;XM_005377341;XM_005377342 XP_005377398;XP_005377399 MODEL 9002525 ncrna LOC102019814 uncharacterized LOC102019814 NW_004955486 6994124 7001608 + 102019814 AGCD01059127;GBDF01146141;XR_001231100;XR_001231101;XR_263958 MODEL 39131880 snrna U1 U1 spliceosomal RNA 8808835 protein-coding Rgr retinal G protein coupled receptor INVOLVED IN retinoid metabolic process (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); optic atrophy (ortholog); retinitis pigmentosa (ortholog); FOUND IN plasma membrane (ortholog) NW_004955510 3752118 3762251 + 102004738 AGCD01066247;XM_005407884 XP_005407941 MODEL 8775748 protein-coding Poglut3 protein O-glucosyltransferase 3 ENCODES a protein that exhibits EGF-domain serine glucosyltransferase activity (ortholog); EGF-domain serine xylosyltransferase activity (ortholog); UDP-glucosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via glucose (ortholog); protein O-linked glycosylation via xylose (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955412 10582169 10598153 - 102014338 AGCD01012771;GBCE01045208;GBCE01045210;XM_013511000 XP_013366454 MODEL 8999679 protein-coding Spata45 spermatogenesis associated 45 ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955406 4702976 4731424 + 102018798 AGCD01005701;AGCD01005702;GBDF01182659;XM_005374735 XP_005374792 MODEL 8978301 protein-coding LOC102008154 fMet-Leu-Phe receptor NW_004955558 805352 810836 + 102008154 AGCD01073392;GBDK01070147;XM_005412671 XP_005412728 MODEL 8900944 protein-coding Plekhb2 pleckstrin homology domain containing B2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955459 594794 661152 + 102016896 AGCD01047942;AGCD01047943;AGCD01047944;AGCD01047945;AGCD01047946;AGCD01047947;GBCQ01001045;GBDJ01009535;XM_013521055 XP_013376509 MODEL 8986127 pseudo LOC102011642 ras-related protein Rab-5A pseudogene NW_004955468 5230636 5231184 + 102011642 AGCD01051959 MODEL 8976803 protein-coding Ptgs1 prostaglandin-endoperoxide synthase 1 ENCODES a protein that exhibits oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (ortholog); peroxidase activity (ortholog); prostaglandin-endoperoxide synthase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); learning (ortholog); maintenance of blood-brain barrier (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Abscess (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum lumen (ortholog); nuclear envelope (ortholog) NW_004955419 5678750 5699305 - 102008534 AGCD01019834;GBCQ01066127;XM_005382532;XM_013513294 XP_005382589;XP_013368748 MODEL 8868094 protein-coding Sf3a1 splicing factor 3a subunit 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955455 4579153 4601942 - 102020308 AGCD01045681;GBBH01034806;XM_005396258 XP_005396315 MODEL 730469239 snorna SNORA79 Small nucleolar RNA SNORA79 8724624 protein-coding LOC102008516 epididymal secretory glutathione peroxidase NW_004955465 13787944 13795076 + 102008516 AGCD01050624;AGCD01050625;XM_005399016 XP_005399073 MODEL 8973023 protein-coding Trmt61a tRNA methyltransferase 61A ENCODES a protein that exhibits mRNA (adenine-N1-)-methyltransferase activity (ortholog); tRNA (adenine(58)-N1)-methyltransferase activity (ortholog); INVOLVED IN mRNA processing (ortholog); ASSOCIATED WITH Cornelia de Lange syndrome (ortholog); esophageal cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN tRNA (m1A) methyltransferase complex (ortholog) NW_004955538 2383666 2393667 + 102010944 AGCD01071124;GBDI01164437;XM_005410781 XP_005410838 MODEL 10070852 ncrna LOC106147436 uncharacterized LOC106147436 NW_004955559 2173390 2184797 + 106147436 AGCD01073697;AGCD01073698;GBBH01132400;XR_001232340 MODEL 8752602 protein-coding LOC102019464 uncharacterized LOC102019464 NW_004955405 40216488 40222185 + 102019464 AGCD01005508;GBDF01072121;XM_005374613;XM_013519025 XP_005374670;XP_013374479 MODEL 8966850 protein-coding Epha3 EPH receptor A3 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN cell migration (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH atrial fibrillation (ortholog); colon adenocarcinoma (ortholog); disease of cellular proliferation (ortholog); FOUND IN early endosome (ortholog); extracellular region (ortholog); GABA-ergic synapse (ortholog) NW_004955407 4135671 4500900 - 102019666 AGCD01006872;AGCD01006873;AGCD01006874;AGCD01006875;AGCD01006876;AGCD01006877;AGCD01006878;AGCD01006879;AGCD01006880;AGCD01006881;GBBH01045871;XM_005375517;XM_005375518 XP_005375574;XP_005375575 MODEL 8732357 ncrna LOC102019816 uncharacterized LOC102019816 NW_004955491 8941349 8946467 - 102019816 AGCD01060621;GBDF01074465;XR_264044 MODEL 8857190 pseudo LOC102022344 uncharacterized LOC102022344 NW_004955448 10720131 10725989 + 102022344 AGCD01041500 MODEL 8980792 protein-coding Tra2b transformer 2 beta homolog ENCODES a protein that exhibits identical protein binding (ortholog); mRNA binding (ortholog); poly-purine tract binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cerebral cortex regionalization (ortholog); embryonic brain development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear inner membrane (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955420 21707618 21728186 + 102008321 AGCD01021159;GBDF01002404;XM_005383286 XP_005383343 MODEL 730469001 snorna SNORA17 Small nucleolar RNA SNORA17 8907591 pseudo LOC102006221 evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial pseudogene NW_004955409 19008763 19009507 - 102006221 AGCD01009854 MODEL 8837929 protein-coding Ramac RNA guanine-7 methyltransferase activating subunit ENCODES a protein that exhibits enzyme activator activity (ortholog); molecular function activator activity (ortholog); RNA binding (ortholog); INVOLVED IN 7-methylguanosine mRNA capping (ortholog); PARTICIPATES IN 5'-end pre-mRNA capping pathway; ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN methyltransferase complex (ortholog); mRNA cap methyltransferase RNMT:RAMAC complex (ortholog); mRNA capping enzyme complex (ortholog) NW_004955416 13686997 13691792 - 102004382 AGCD01017232;GBCE01097705;XM_005381468;XM_013512498 XP_005381525;XP_013367952 MODEL 8789268 ncrna LOC102011218 uncharacterized LOC102011218 NW_004955424 20490173 20500552 + 102011218 AGCD01024856;AGCD01024857;AGCD01024858;GBCB01025533;XR_001234179;XR_261091 MODEL 8798963 protein-coding LOC102003032 uncharacterized LOC102003032 NW_004955421 8414832 8416723 + 102003032 AGCD01021811;GBDF01288165;XM_005383920 XP_005383977 MODEL 8728162 protein-coding Sec31a SEC31 homolog A, COPII component ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); INVOLVED IN COPII-coated vesicle cargo loading (ortholog); response to calcium ion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN COPII vesicle coat (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); cytoplasm (ortholog) NW_004955433 6830732 6891259 - 102008447 AGCD01031549;AGCD01031550;AGCD01031551;AGCD01031552;GBCQ01007447;XM_005388248;XM_005388249;XM_005388250;XM_005388251;XM_005388252;XM_005388253;XM_005388256;XM_013516167;XM_013516168;XM_013516169;XM_013516170;XM_013516171;XM_013516172 XP_005388305;XP_005388306;XP_005388307;XP_005388308;XP_005388309;XP_005388310;XP_005388313;XP_013371621;XP_013371622;XP_013371623;XP_013371624;XP_013371625;XP_013371626 MODEL 9039248 protein-coding Rpusd2 RNA pseudouridine synthase domain containing 2 ENCODES a protein that exhibits pseudouridine synthase activity (ortholog); tRNA pseudouridine synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog); tRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955416 7482226 7485654 + 102022282 AGCD01016984;GBDF01058049;XM_005381243 XP_005381300 MODEL 8705696 protein-coding LOC102004828 olfactory receptor 2A12 NW_004955491 418194 419126 + 102004828 AGCD01060334;XM_005404724 XP_005404781 MODEL 9023955 protein-coding Rnase7 ribonuclease A family member 7 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); peptidoglycan binding (ortholog); RNA nuclease activity (ortholog); INVOLVED IN antibacterial humoral response (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to Gram-negative bacterium (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955550 1796301 1797801 + 102005420 AGCD01072588;XM_005412090;XM_013508574 XP_005412147;XP_013364028 MODEL 8915414 ncrna LOC102010844 uncharacterized LOC102010844 NW_004955443 5803759 5817261 + 102010844 AGCD01038244;GBBH01211346;XR_262178 MODEL 9037534 protein-coding LOC102010058 galectin-5-like NW_004955481 5603002 5609837 - 102010058 AGCD01056998;GBDI01345788;XM_005402926 XP_005402983 MODEL 8951352 ncrna LOC102008894 uncharacterized LOC102008894 NW_004955545 2826658 2829716 + 102008894 AGCD01071923;GBDF01218328;XR_264881 MODEL 8846363 protein-coding Timeless timeless circadian regulator ENCODES a protein that exhibits enzyme activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); cell cycle phase transition (ortholog); ASSOCIATED WITH advanced sleep phase syndrome 4 (ortholog); alcohol use disorder (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleoplasm (ortholog) NW_004955458 3999143 4029523 - 102009354 AGCD01047360;AGCD01047361;AGCD01047362;GBDF01162534;XM_005397313;XM_013521023 XP_005397370;XP_013376477 MODEL 8766837 protein-coding Rorb RAR related orphan receptor B ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); cellular response to retinoic acid (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); astigmatism (ortholog); autistic disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955512 4362287 4541432 - 102007143 AGCD01066741;AGCD01066742;AGCD01066743;GBDF01302225;XM_005408324 XP_005408381 MODEL 9054560 protein-coding Slc34a1 solute carrier family 34 member 1 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN arsenate ion transmembrane transport (ortholog); bone remodeling (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH Acidoses (ortholog); acute kidney failure (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) NW_004955408 29626775 29640811 + 102024651 AGCD01008765;GBCQ01005308;XM_005376430;XM_005376431;XM_005376432;XM_005376433 XP_005376487;XP_005376488;XP_005376489;XP_005376490 MODEL 730469447 snorna SNORA33 Small nucleolar RNA SNORA33 8727505 protein-coding Pink1 PTEN induced kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); C3HC4-type RING finger domain binding (ortholog); kinase activity (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); cellular response to hydrogen sulfide (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN altered mitochondrial autophagy pathway; mitochondria dynamics pathway; mitochondrial autophagy pathway; ASSOCIATED WITH cervical cancer (ortholog); cognitive disorder (ortholog); genetic disease (ortholog); FOUND IN astrocyte projection (ortholog); axon (ortholog); cell body (ortholog) NW_004955452 1171115 1186338 + 102011271 AGCD01043834;AGCD01043835;GBBH01034979;GBDF01010551;XM_013519660 XP_013375114 MODEL 8941527 ncrna LOC102005882 uncharacterized LOC102005882 NW_004955452 2251854 2256006 - 102005882 AGCD01043886;XR_262636 MODEL 8805143 protein-coding Prickle4 prickle planar cell polarity protein 4 ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955437 8177451 8182992 + 102016092 AGCD01034480;GBDF01298022;XM_005389698;XM_005389699;XM_005389700;XM_013517057;XM_013517058;XM_013517059;XM_013517060;XM_013517061;XM_013517062;XM_013517063;XM_013517064;XM_013517065 XP_005389755;XP_005389756;XP_005389757;XP_013372511;XP_013372512;XP_013372513;XP_013372514;XP_013372515;XP_013372516;XP_013372517;XP_013372518;XP_013372519 MODEL 8746033 protein-coding LOC102004077 protein transport protein Sec61 subunit beta-like NW_004955491 6427300 6427659 + 102004077 AGCD01060529;XM_013504569 XP_013360023 MODEL 8945095 protein-coding Ppm1d protein phosphatase, Mg2+/Mn2+ dependent 1D ENCODES a protein that exhibits mitogen-activated protein kinase binding (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cellular response to starvation (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; p38 MAPK signaling pathway; p53 signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); Arnold-Chiari Malformation (ortholog); astigmatism (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955451 1878110 1915794 + 102008169 AGCD01042992;AGCD01042993;AGCD01042994;AGCD01042995;AGCD01042996;AGCD01042997;AGCD01042998;GBDF01009582;GBDF01009585;XM_005393964 XP_005394021 MODEL 730469025 snorna SNORA51 Small nucleolar RNA SNORA51 8907752 protein-coding Phaf1 phagophore assembly factor 1 ENCODES a protein that exhibits glutamate receptor binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); phagophore assembly site (ortholog) NW_004955484 9466880 9491176 - 102016597 AGCD01058415;AGCD01058416;AGCD01058417;GBCB01038540;XM_005403701;XM_013503960 XP_005403758;XP_013359414 MODEL 8938864 protein-coding LOC102013249 short-chain dehydrogenase/reductase family 16C member 6-like NW_004955454 15372653 15401544 - 102013249 AGCD01045493;GBCC01001125;XM_005396086;XM_005396087 XP_005396143;XP_005396144 MODEL 8803459 protein-coding Rbmx2 RNA binding motif protein X-linked 2 INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN nuclear membrane (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955473 4654257 4664419 - 102006339 AGCD01053954;GBDF01075377;XM_005401234 XP_005401291 MODEL 8889519 protein-coding Prss33 serine protease 33 ENCODES a protein that exhibits serine-type peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955442 14521485 14524632 - 102016204 AGCD01037824;GBDK01223259;XM_005391403 XP_005391460 MODEL 8823441 protein-coding Srcin1 SRC kinase signaling inhibitor 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); conditioned place preference (ortholog); negative regulation of cell adhesion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); cytoplasm (ortholog) NW_004955451 13673613 13734639 - 102018149 AGCD01043497;AGCD01043498;AGCD01043499;AGCD01043500;GBBH01186980;GBDK01061796;XM_013519340;XM_013519341;XM_013519342;XM_013519343;XM_013519344;XM_013519345;XM_013519346;XM_013519347;XM_013519348;XM_013519349;XM_013519350;XM_013519351;XM_013519352;XM_013519353;XM_013519354;XM_013519355;XR_001235979 XP_013374794;XP_013374795;XP_013374796;XP_013374797;XP_013374798;XP_013374799;XP_013374800;XP_013374801;XP_013374802;XP_013374803;XP_013374804;XP_013374805;XP_013374806;XP_013374807;XP_013374808;XP_013374809 MODEL 39133237 snrna U4 U4 spliceosomal RNA 8873602 protein-coding LOC102007356 olfactory receptor 13G1-like NW_004955507 6477447 6478391 - 102007356 AGCD01065718;XM_005407724 XP_005407781 MODEL 8923585 protein-coding Snx14 sorting nexin 14 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); postsynaptic modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive spinocerebellar ataxia 20 (ortholog); brachydactyly (ortholog); FOUND IN late endosome (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955411 12967980 13048839 - 102020226 AGCD01011862;AGCD01011863;AGCD01011864;AGCD01011865;AGCD01011866;GBDF01122706;XM_005377702;XM_005377703 XP_005377759;XP_005377760 MODEL 8811038 protein-coding LOC102005501 chloride channel protein ClC-Ka NW_004955527 2203583 2213969 - 102005501 AGCD01069424;GBCQ01008207;XM_005409849;XM_005409850;XM_013507416 XP_005409906;XP_005409907;XP_013362870 MODEL 39131885 snrna U1 U1 spliceosomal RNA 9049274 protein-coding LOC102016305 vomeronasal type-2 receptor 116-like NW_004955524 4386049 4405870 - 102016305 AGCD01068971;XM_005409718 XP_005409775 MODEL 8795795 ncrna LOC102019466 uncharacterized LOC102019466 NW_004955453 10002932 10006876 - 102019466 AGCD01044781;GBDF01278069;XR_001236152 MODEL 8785843 protein-coding Rgs1 regulator of G protein signaling 1 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); leukotriene signaling pathway (ortholog); response to bacterium (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Arsenic Poisoning (ortholog); COVID-19 (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955406 30042354 30047172 + 102017535 AGCD01006357;GBDK01060690;XM_005375098 XP_005375155 MODEL 8835106 protein-coding LOC102003033 HRAS-like suppressor 3 NW_004955422 21415634 21440465 + 102003033 AGCD01023116;GBDK01181579;XM_005384673;XM_013514096;XM_013514097 XP_005384730;XP_013369550;XP_013369551 MODEL 8826098 pseudo LOC102019819 40S ribosomal protein S15a pseudogene NW_004955423 1535960 1536367 - 102019819 AGCD01023440 MODEL 8917169 protein-coding Epha4 EPH receptor A4 ENCODES a protein that exhibits DH domain binding (ortholog); ephrin receptor activity (ortholog); ephrin receptor binding (ortholog); INVOLVED IN adherens junction organization (ortholog); adult walking behavior (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); axonal growth cone (ortholog) NW_004955453 12099800 12240199 + 102026827 AGCD01044828;AGCD01044829;GBBH01055701;XM_005395504 XP_005395561 MODEL 9021421 protein-coding Ppm1e protein phosphatase, Mg2+/Mn2+ dependent 1E ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to xenobiotic stimulus (ortholog); positive regulation of stress fiber assembly (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955451 3989575 4137400 - 102018877 AGCD01043087;AGCD01043088;AGCD01043089;AGCD01043090;AGCD01043091;AGCD01043092;GBDF01190593;XM_005393998 XP_005394055 MODEL 8954322 protein-coding Bub1 BUB1 mitotic checkpoint serine/threonine kinase ENCODES a protein that exhibits histone H2A kinase activity (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog); kinetochore (ortholog) NW_004955470 3152798 3190185 + 102007217 AGCD01052692;AGCD01052693;GBDF01156049;XM_005400628 XP_005400685 MODEL 8812616 protein-coding LOC102008157 vomeronasal type-2 receptor 116-like NW_004955563 100634 120790 - 102008157 AGCD01074043;AGCD01074044;AGCD01074045;AGCD01074046;GBDF01162776;XM_013509122 XP_013364576 MODEL 9009521 protein-coding Sec31b SEC31 homolog B, COPII component ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog); vesicle coat (ortholog) NW_004955485 9615879 9655826 + 102008860 AGCD01058775;AGCD01058776;AGCD01058777;GBDI01185507;XM_005403906;XM_005403908;XM_005403909;XM_005403910;XM_005403911;XM_013504055;XM_013504057;XM_013504058;XM_013504059;XM_013504060 XP_005403963;XP_005403965;XP_005403966;XP_005403967;XP_005403968;XP_013359509;XP_013359511;XP_013359512;XP_013359513;XP_013359514 MODEL 9021859 protein-coding LOC102004831 olfactory receptor 4B1-like NW_004955422 329742 330700 + 102004831 AGCD01022404;XM_005384935 XP_005384992 MODEL 151707875 snorna SNORD52 Small nucleolar RNA SNORD52 8978744 protein-coding Sf3a2 splicing factor 3a subunit 2 INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); positive regulation of neuron projection development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955495 5896648 5904287 - 102016929 AGCD01062043;GBDF01008843;XM_005405914;XM_005405915 XP_005405971;XP_005405972 MODEL 8739981 ncrna LOC102008517 uncharacterized LOC102008517 NW_004955412 20462018 20473633 + 102008517 AGCD01013009;GBDF01220421;XR_260003 MODEL 8805897 protein-coding Wdfy1 WD repeat and FYVE domain containing 1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); INVOLVED IN positive regulation of toll-like receptor 3 signaling pathway (ortholog); positive regulation of toll-like receptor 4 signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); nucleus (ortholog) NW_004955453 10101576 10148205 + 102020198 AGCD01044782;GBDF01044991;XM_005395485 XP_005395542 MODEL 8731635 pseudo LOC102018237 high mobility group protein B1-like NW_004955445 10890882 10892048 - 102018237 AGCD01039680 MODEL 9065187 protein-coding Timm10 translocase of inner mitochondrial membrane 10 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-folding chaperone binding (ortholog); unfolded protein holdase activity (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); rhabdomyosarcoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog) NW_004955511 2498498 2500828 - 102017900 AGCD01066409;GBCE01052696;XM_005407996 XP_005408053 MODEL 9045231 pseudo LOC102012050 protein regulator of cytokinesis 1-like NW_004955451 11417605 11442353 + 102012050 AGCD01043354 MODEL 8948764 protein-coding Trmt61b tRNA methyltransferase 61B ENCODES a protein that exhibits mRNA (adenine-N1-)-methyltransferase activity (ortholog); rRNA (adenine) methyltransferase activity (ortholog); tRNA (adenine(58)-N1)-methyltransferase activity (ortholog); INVOLVED IN mitochondrial tRNA processing (ortholog); mRNA processing (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955469 10744814 10771560 - 102014440 AGCD01052549;GBDI01162186;XM_013522617 XP_013378071 MODEL 150537117 snorna SNORA35 Small nucleolar RNA SNORA35 9028430 pseudo LOC102022348 40S ribosomal protein S2 pseudogene NW_004955894 10943 11793 + 102022348 AGCD01078600 MODEL 730469044 snorna SNORA17 Small nucleolar RNA SNORA17 10172450 ncrna LOC106150333 uncharacterized LOC106150333 NW_004955472 727679 740880 + 106150333 AGCD01053353;AGCD01053354;GBBH01226500;XR_001237078;XR_001237079;XR_001237080 MODEL 8882175 protein-coding Pogz pogo transposable element derived with ZNF domain INVOLVED IN double-strand break repair via homologous recombination (ortholog); kinetochore assembly (ortholog); mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH anemia (ortholog); anisometropia (ortholog); anxiety disorder (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955589 920729 975242 + 102020969 AGCD01076184;AGCD01076185;GBCE01188432;XM_005414572;XM_005414573;XM_013509945;XM_013509946;XM_013509947;XM_013509948 XP_005414629;XP_005414630;XP_013365399;XP_013365400;XP_013365401;XP_013365402 MODEL 9030597 protein-coding Ramp1 receptor activity modifying protein 1 ENCODES a protein that exhibits amylin receptor activity (ortholog); calcitonin gene-related peptide binding (ortholog); calcitonin gene-related peptide receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); amylin receptor 1 signaling pathway (ortholog); amylin receptor signaling pathway (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cell surface (ortholog); CGRP receptor complex (ortholog); extracellular region (ortholog) NW_004955542 2530349 2564072 - 102016423 AGCD01071524;AGCD01071525;GBBH01000037;GBDF01085513;XM_013508020 XP_013363474 MODEL 730469516 snorna SNORA51 Small nucleolar RNA SNORA51 8761390 protein-coding LOC102011647 olfactory receptor 52B2-like NW_004955414 21925278 21926526 - 102011647 AGCD01015437;XM_013511699 XP_013367153 MODEL 8833910 protein-coding Ptgs2 prostaglandin-endoperoxide synthase 2 ENCODES a protein that exhibits enzyme binding (ortholog); heme binding (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (ortholog); INVOLVED IN angiogenesis (ortholog); bone mineralization (ortholog); brown fat cell differentiation (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Abscess (ortholog); acute kidney failure (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955406 25077988 25086259 - 102014110 AGCD01006213;AGCD01006214;GBCQ01175625;GBDJ01276049;XM_005375091 XP_005375148 MODEL 8895075 protein-coding Rnase9 ribonuclease A family member 9 (inactive) INVOLVED IN positive regulation of flagellated sperm motility involved in capacitation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955550 1371792 1372355 - 102025947 AGCD01072564;XM_005412141 XP_005412198 MODEL 8905112 protein-coding Spata46 spermatogenesis associated 46 INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); spermatogenesis (ortholog); FOUND IN nuclear membrane (ortholog) NW_004955462 13950726 13953765 + 102013912 AGCD01049435;GBCE01083721;XM_005398276;XM_005398277 XP_005398333;XP_005398334 MODEL 9054254 protein-coding Rpusd3 RNA pseudouridine synthase D3 ENCODES a protein that exhibits tRNA pseudouridine synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog); positive regulation of mitochondrial translation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); ribonucleoprotein granule (ortholog) NW_004955561 1358003 1361634 - 102009998 AGCD01073851;GBDI01080735;XM_005413036;XM_005413037;XM_005413038;XM_013509112 XP_005413093;XP_005413094;XP_005413095;XP_013364566 MODEL 8904498 ncrna LOC102006222 uncharacterized LOC102006222 NW_004955461 4118997 4141681 + 102006222 AGCD01048858;AGCD01048859;AGCD01048860;XR_263079 MODEL 8929995 protein-coding LOC102010059 olfactory receptor 2M5-like NW_004955418 30041497 30084803 - 102010059 AGCD01019499;AGCD01019500;AGCD01019501;AGCD01019502;AGCD01019503;XM_013512879 XP_013368333 MODEL 8894866 protein-coding Slc34a2 solute carrier family 34 member 2 ENCODES a protein that exhibits phosphate ion binding (ortholog); protein domain specific binding (ortholog); sodium ion binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); intracellular phosphate ion homeostasis (ortholog); phosphate ion transport (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) NW_004955443 19452373 19467129 - 102019967 AGCD01038626;GBBH01022814;GBDF01193795;XM_013518107 XP_013373561 MODEL 8764255 pseudo LOC102008895 60S ribosomal protein L26-like NW_004955441 12522219 12523098 + 102008895 AGCD01037123 MODEL 9008811 protein-coding Rorc RAR related orphan receptor C ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); alpha-beta T cell differentiation (ortholog); cell differentiation (ortholog); ASSOCIATED WITH advanced sleep phase syndrome (ortholog); Animal Toxoplasmosis (ortholog); bacterial pneumonia (ortholog); FOUND IN external side of plasma membrane (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955589 590653 616784 + 102013889 AGCD01076177;AGCD01076178;AGCD01076179;GBDF01226139;GBDK01137332;XM_005414548 XP_005414605 MODEL 8782666 ncrna LOC102005885 uncharacterized LOC102005885 NW_004955405 12185694 12195667 + 102005885 AGCD01004849;GBDF01147002;XR_259373 MODEL 626189167 snorna SNORA79 Small nucleolar RNA SNORA79 8952253 protein-coding Pinlyp phospholipase A2 inhibitor and LY6/PLAUR domain containing ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955555 1316543 1322241 + 102016430 AGCD01073072;GBDF01268870;XM_005412532;XM_013508748 XP_005412589;XP_013364202 MODEL 9060791 ncrna LOC102011220 uncharacterized LOC102011220 NW_004955425 27826699 27828785 - 102011220 AGCD01025989;GBDF01079916;XR_261178 MODEL 8887487 protein-coding Trabd TraB domain containing ENCODES a protein that exhibits mitochondrion-mitochondrion outer membrane tether activity (ortholog); INVOLVED IN mitochondrial fusion (ortholog); protein localization to mitochondrion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); TOM complex (ortholog) NW_004955413 33229796 33233686 + 102023348 AGCD01014658;GBCE01114750;GBCQ01098684;XM_005379547;XM_005379548 XP_005379604;XP_005379605 MODEL 8933930 ncrna LOC102004078 uncharacterized LOC102004078 NW_004955422 13779712 13782349 - 102004078 AGCD01022838;GBDI01019729;XR_260873 MODEL 8986311 protein-coding Rbmxl2 RBMX like 2 FOUND IN nucleus (ortholog) NW_004955414 22919632 22921150 + 102015005 AGCD01015485;AGCD01015486;GBDF01083890;XM_005380515 XP_005380572 MODEL 8941544 pseudo LOC102007357 transmembrane protein 168 pseudogene NW_004955511 1610996 1613016 + 102007357 AGCD01066376 MODEL 10286422 ncrna LOC106147438 uncharacterized LOC106147438 NW_004955559 1612329 1613069 + 106147438 AGCD01073653;GBDI01209450;XR_001232341 MODEL 8752499 protein-coding Srd5a1 steroid 5 alpha-reductase 1 ENCODES a protein that exhibits 3-oxo-5-alpha-steroid 4-dehydrogenase (NADP+) activity (ortholog); 3-oxo-5-alpha-steroid 4-dehydrogenase activity (ortholog); binding (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); androgen catabolic process (ortholog); androgen metabolic process (ortholog); PARTICIPATES IN testosterone biosynthetic pathway; ASSOCIATED WITH alcohol dependence (ortholog); breast carcinoma (ortholog); Cardiomegaly (ortholog); FOUND IN cell body fiber (ortholog); neuronal cell body (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955504 4360909 4388964 + 102015422 AGCD01064883;GBCB01024373;XM_005407066 XP_005407123 MODEL 9059924 protein-coding LOC102005505 homeobox protein ESX1-like NW_004955534 3330 9799 + 102005505 AGCD01070431;GBDF01222868;XM_005410423 XP_005410480 MODEL 39131889 snrna U1 U1 spliceosomal RNA 8990178 ncrna LOC102018240 uncharacterized LOC102018240 NW_004955447 18427382 18430221 + 102018240 AGCD01041172;GBDF01114538;XR_262446 MODEL 151707878 snorna SNORD53_SNORD92 Small nucleolar RNA SNORD53/SNORD92 8773625 ncrna LOC102019468 uncharacterized LOC102019468 NW_004955455 8871582 8873817 - 102019468 AGCD01045910;GBDF01190667;XR_262845;XR_262846 MODEL 8762999 protein-coding Trmt9b tRNA methyltransferase 9B (putative) ENCODES a protein that exhibits tRNA methyltransferase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955463 4035145 4096996 - 102015816 AGCD01049600;AGCD01049601;GBDJ01298592;XM_013521538;XM_013521539;XM_013521540;XM_013521541;XM_013521542;XM_013521543;XM_013521544;XM_013521545;XM_013521546;XM_013521547;XM_013521548;XM_013521549;XM_013521550;XM_013521551;XM_013521552;XM_013521553;XM_013521554;XM_013521555;XM_013521556;XM_013521557;XM_013521558;XM_013521559 XP_013376992;XP_013376993;XP_013376994;XP_013376995;XP_013376996;XP_013376997;XP_013376998;XP_013376999;XP_013377000;XP_013377001;XP_013377002;XP_013377003;XP_013377004;XP_013377005;XP_013377006;XP_013377007;XP_013377008;XP_013377009;XP_013377010;XP_013377011;XP_013377012;XP_013377013 MODEL 8756688 pseudo LOC102003038 splicing factor 3B subunit 4 pseudogene NW_004955424 14377491 14379086 - 102003038 AGCD01024652 MODEL 730469050 snorna SNORA17 Small nucleolar RNA SNORA17 9038540 protein-coding Phax phosphorylated adaptor for RNA export ENCODES a protein that exhibits mRNA cap binding complex binding (ortholog); toxic substance binding (ortholog); INVOLVED IN RNA stabilization (ortholog); snRNA export from nucleus (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Hirschsprung's disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); neuronal cell body (ortholog); nucleoplasm (ortholog) NW_004955521 4425382 4442668 + 102019098 AGCD01068262;GBDF01195825;XM_005409329 XP_005409386 MODEL 8720612 pseudo LOC102019823 dual specificity protein kinase TTK pseudogene NW_004955425 15961112 15962176 + 102019823 AGCD01025594 MODEL 8914210 protein-coding Plekhd1 pleckstrin homology and coiled-coil domain containing D1 ASSOCIATED WITH Breast Neoplasms (ortholog); nonpapillary renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955466 853902 878813 - 102015091 AGCD01050680;GBCB01056747;GBCE01126830;XM_013521969 XP_013377423 MODEL 8784321 protein-coding Epha5 EPH receptor A5 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN axon guidance (ortholog); axonal fasciculation (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH malignant astrocytoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); cell periphery (ortholog) NW_004955447 7066111 7382046 + 102015063 AGCD01040810;AGCD01040811;AGCD01040812;AGCD01040813;AGCD01040814;AGCD01040815;AGCD01040816;AGCD01040817;AGCD01040818;AGCD01040819;GBCQ01016524;XM_005392842;XM_013518577 XP_005392899;XP_013374031 MODEL 8856862 protein-coding LOC102010846 olfactory receptor 2W1-like NW_004955576 1239098 1240057 - 102010846 AGCD01075364;XM_005413951 XP_005414008 MODEL 8929461 protein-coding Bub1b BUB1 mitotic checkpoint serine/threonine kinase B ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN metaphase/anaphase transition of mitotic cell cycle (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); protein localization to chromosome, centromeric region (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); Breast Cancer, Familial (ortholog); cerebral palsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); kinetochore (ortholog) NW_004955416 7105302 7159121 + 102015008 AGCD01016963;AGCD01016964;AGCD01016965;AGCD01016966;GBDF01053678;XM_005381216;XM_005381217;XM_005381218;XM_013512666;XM_013512667 XP_005381273;XP_005381274;XP_005381275;XP_013368120;XP_013368121 MODEL 8914971 protein-coding Prss35 serine protease 35 ASSOCIATED WITH Hepatomegaly (ortholog); sarcoma (ortholog) NW_004955411 11163543 11164689 + 102015820 AGCD01011808;GBCQ01076266;XM_005377932 XP_005377989 MODEL 39133238 snrna U4 U4 spliceosomal RNA 8781916 ncrna LOC102004832 uncharacterized LOC102004832 NW_004955495 4237269 4239443 - 102004832 AGCD01061905;XR_264150 MODEL 8720990 pseudo LOC102008519 mitochondrial import inner membrane translocase subunit TIM14-like NW_004955412 23530210 23530974 + 102008519 AGCD01013090 MODEL 8825629 protein-coding LOC102008160 zinc finger protein 709-like NW_004955569 1635173 1644301 + 102008160 AGCD01074673;GBDF01011195;XM_005413505 XP_005413562 MODEL 8906564 protein-coding Snx15 sorting nexin 15 FOUND IN cytosol (ortholog) NW_004955422 20149570 20158076 - 102020021 AGCD01023068;GBDF01047995;XM_005384526 XP_005384583 MODEL 9033925 protein-coding Prim1 DNA primase subunit 1 ENCODES a protein that exhibits DNA-directed RNA polymerase activity (ortholog); magnesium ion binding (ortholog); ribonucleotide binding (ortholog); INVOLVED IN DNA replication initiation (ortholog); DNA replication, synthesis of primer (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN alpha DNA polymerase:primase complex (ortholog) NW_004955458 4265500 4294329 - 102014116 AGCD01047395;AGCD01047396;AGCD01047397;AGCD01047398;AGCD01047399;AGCD01047400;GBCB01132065;GBDI01357635;XM_013520988 XP_013376442 MODEL 8825216 protein-coding Wdfy2 WD repeat and FYVE domain containing 2 INVOLVED IN positive regulation of fat cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endosome (ortholog) NW_004955431 4809405 5086647 + 102030224 AGCD01030011;AGCD01030012;AGCD01030013;AGCD01030014;GBDF01161721;XM_005387605;XM_005387606;XM_005387607;XM_013515761;XM_013515762;XM_013515763;XR_261449 XP_005387662;XP_005387663;XP_005387664;XP_013371215;XP_013371216;XP_013371217 MODEL 8866538 protein-coding Sf3a3 splicing factor 3a subunit 3 INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955452 15691729 15715782 - 102016339 AGCD01044494;AGCD01044495;GBCB01056221;XM_005395224 XP_005395281 MODEL 8740493 ncrna LOC102016306 uncharacterized LOC102016306 NW_004955436 2556498 2593946 + 102016306 AGCD01033611;GBDF01014447;XR_001234922;XR_001234923;XR_261747 MODEL 8867241 ncrna LOC102012054 uncharacterized LOC102012054 NW_004955405 38958635 38968152 + 102012054 AGCD01005493;GBDK01428567;XR_259444 MODEL 8830058 protein-coding Srd5a2 steroid 5 alpha-reductase 2 ENCODES a protein that exhibits 3-oxo-5-alpha-steroid 4-dehydrogenase (NADP+) activity (ortholog); 3-oxo-5-alpha-steroid 4-dehydrogenase activity (ortholog); binding (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); androgen metabolic process (ortholog); bone development (ortholog); PARTICIPATES IN testosterone biosynthetic pathway; ASSOCIATED WITH alopecia (ortholog); amenorrhea (ortholog); breast carcinoma (ortholog); FOUND IN cell body fiber (ortholog); neuronal cell body (ortholog) NW_004955441 12149 95733 - 102020288 AGCD01036675;AGCD01036676;AGCD01036677;AGCD01036678;GBDF01286957;XM_005390834 XP_005390891 MODEL 9024369 protein-coding Timm10b translocase of inner mitochondrial membrane 10B INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN carrier pathway of mitochondrial protein import; ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog) NW_004955414 22214457 22217351 + 102023142 AGCD01015449;GBDK01146994;XM_005380148 XP_005380205 MODEL 8788053 protein-coding LOC102022349 collagen alpha-1(I) chain-like NW_004955451 13935187 13936367 + 102022349 AGCD01043514;GBDK01343386;XM_005394291 XP_005394348 MODEL 8888167 pseudo LOC102013252 ataxin-1-like NW_004955456 14143590 14145611 + 102013252 AGCD01046634 MODEL 10317837 protein-coding LOC106150334 uncharacterized LOC106150334 NW_004955472 909845 924601 - 106150334 AGCD01053365;GBDI01187571;XM_013522968 XP_013378422 MODEL 8761762 protein-coding Pola1 DNA polymerase alpha 1, catalytic subunit ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA polymerase activity (ortholog); INVOLVED IN DNA biosynthetic process (ortholog); DNA repair (ortholog); DNA replication (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aplastic anemia (ortholog); bone marrow disease (ortholog); FOUND IN alpha DNA polymerase:primase complex (ortholog); chromatin (ortholog); cytosol (ortholog) NW_004955509 5007385 5319683 + 102020470 AGCD01066094;AGCD01066095;AGCD01066096;AGCD01066097;AGCD01066098;AGCD01066099;AGCD01066100;GBBH01097790;XM_005407854;XM_013506296 XP_005407911;XP_013361750 MODEL 8978269 protein-coding Trabd2b TraB domain containing 2B ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); Wnt-protein binding (ortholog); INVOLVED IN negative regulation of Wnt signaling pathway (ortholog); positive regulation of protein-containing complex assembly (ortholog); proteolysis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog); plasma membrane raft (ortholog) NW_004955464 10612515 10817725 + 102007093 AGCD01050127;GBCE01168317;XM_005398637 XP_005398694 MODEL 8964960 protein-coding Pth parathyroid hormone ENCODES a protein that exhibits hormone activity (ortholog); parathyroid hormone receptor binding (ortholog); peptide hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); bone mineralization (ortholog); bone resorption (ortholog); PARTICIPATES IN parathyroid hormone signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); anemia (ortholog); Animal Disease Models (ortholog); FOUND IN extracellular region (ortholog) NW_004955414 28828389 28831417 - 102020327 AGCD01015689;GBDF01224218;XM_005380323 XP_005380380 MODEL 39133833 ribozyme RNase_MRP RNase MRP 8895770 protein-coding Ppm1f protein phosphatase, Mg2+/Mn2+ dependent 1F ENCODES a protein that exhibits calmodulin-dependent protein phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); intracellular signal transduction (ortholog); negative regulation of cell-cell adhesion mediated by cadherin (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955442 17233258 17256009 + 102016525 AGCD01037946;AGCD01037947;GBCB01067010;XM_013517654 XP_013373108 MODEL 8892929 ncrna LOC102006226 uncharacterized LOC102006226 NW_004955412 3986877 4028160 - 102006226 AGCD01012589;AGCD01012590;GBDF01111005;XR_259969 MODEL 8807199 protein-coding Spata6 spermatogenesis associated 6 ENCODES a protein that exhibits myosin light chain binding (ortholog); INVOLVED IN motile cilium assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN sperm head-tail coupling apparatus (ortholog) NW_004955464 10225661 10340528 + 102004580 AGCD01050120;AGCD01050121;AGCD01050122;AGCD01050123;AGCD01050124;GBDF01002413;XM_005398629;XM_005398630 XP_005398686;XP_005398687 MODEL 8897615 protein-coding Rpusd4 RNA pseudouridine synthase D4 ENCODES a protein that exhibits mitochondrial ribosomal large subunit rRNA binding (ortholog); pseudouridine synthase activity (ortholog); tRNA binding (ortholog); INVOLVED IN mitochondrial RNA modification (ortholog); mitochondrial tRNA pseudouridine synthesis (ortholog); mRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955412 27231371 27239366 - 102028282 AGCD01013231;AGCD01013232;GBDK01358362;XM_005378485;XM_005378487 XP_005378542;XP_005378544 MODEL 9007013 pseudo LOC102010065 plasminogen activator inhibitor 1 RNA-binding protein pseudogene NW_004955424 3444768 3446184 - 102010065 AGCD01024310;XR_261038 MODEL 8746222 protein-coding Slc34a3 solute carrier family 34 member 3 ENCODES a protein that exhibits sodium:phosphate symporter activity (ortholog); INVOLVED IN intracellular phosphate ion homeostasis (ortholog); phosphate ion transport (ortholog); response to magnesium ion (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH anal canal squamous cell carcinoma (ortholog); calcium oxalate nephrolithiasis (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) NW_004955513 5228575 5233501 + 102010720 AGCD01066963;GBCQ01002877;XM_005408605;XM_005408606 XP_005408662;XP_005408663 MODEL 39131893 snrna U1 U1 spliceosomal RNA 9056956 pseudo LOC102005895 mitochondrial fission factor-like NW_004955455 5401970 5404213 + 102005895 AGCD01045725 MODEL 8719435 protein-coding LOC102018242 vomeronasal type-2 receptor 1-like NW_004955448 7059300 7085760 + 102018242 AGCD01041399;AGCD01041400;XM_005393075 XP_005393132 MODEL 8757906 protein-coding Sec61a1 SEC61 translocon subunit alpha 1 ENCODES a protein that exhibits calcium channel activity (ortholog); ribosome binding (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN cotranslational protein targeting to membrane (ortholog); endoplasmic reticulum organization (ortholog); post-translational protein targeting to endoplasmic reticulum membrane (ortholog); ASSOCIATED WITH autosomal dominant tubulointerstitial kidney disease 5 (ortholog); Charcot-Marie-Tooth disease axonal type 2T (ortholog); Common Variable Immunodeficiency 15 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955429 15637461 15652556 - 102026894 AGCD01028811;GBDF01084562;XM_005387046 XP_005387103 MODEL 730468931 snorna SNORA17 Small nucleolar RNA SNORA17 8931135 protein-coding LOC102011649 NADH-cytochrome b5 reductase 2 ENCODES a protein that exhibits cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog) NW_004955414 23421387 23427883 - 102011649 AGCD01015497;GBCE01040815;GBDJ01193166;XM_013511703 XP_013367157 MODEL 8879454 protein-coding Rgs10 regulator of G protein signaling 10 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled acetylcholine receptor signaling pathway (ortholog); response to amphetamine (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN axon terminus (ortholog); cytosol (ortholog); dendritic spine (ortholog) NW_004955551 318229 348578 - 102009228 AGCD01072654;GBDI01084285;XM_005412158;XM_013508591 XP_005412215;XP_013364045 MODEL 9056314 protein-coding LOC102010850 cytochrome P450 1A1 ENCODES a protein that exhibits arachidonate monooxygenase activity (ortholog); demethylase activity (ortholog); enzyme binding (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); amine metabolic process (ortholog); camera-type eye development (ortholog); PARTICIPATES IN gefitinib pharmacokinetics pathway; phase I biotransformation pathway via cytochrome P450; tamoxifen pharmacokinetics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial inner membrane (ortholog) NW_004955450 3183958 3189488 + 102010850 AGCD01042426;GBDK01432211;XM_005393546;XM_005393547 XP_005393603;XP_005393604 MODEL 8811443 protein-coding LOC102019826 cytochrome P450 2C23-like NW_004955507 5971641 6011264 - 102019826 AGCD01065693;AGCD01065694;GBDF01082078;XM_013506229 XP_013361683 MODEL 10152510 ncrna LOC106150335 uncharacterized LOC106150335 NW_004955472 924677 932016 - 106150335 AGCD01053365;XR_001237081 MODEL 39131346 protein-coding RAMP1 receptor activity modifying protein 1 626189191 snorna SNORA35 Small nucleolar RNA SNORA35 8756777 ncrna LOC102008525 uncharacterized LOC102008525 NW_004955414 26180989 26187857 + 102008525 AGCD01015640;GBDF01208439;XR_260197 MODEL 8877767 ncrna LOC102005511 uncharacterized LOC102005511 NW_004955545 2705974 2709122 - 102005511 AGCD01071919;GBDI01034537;XR_001232179;XR_264880 MODEL 8984449 protein-coding Ros1 ROS proto-oncogene 1, receptor tyrosine kinase ENCODES a protein that exhibits protein phosphatase binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN cell differentiation (ortholog); columnar/cuboidal epithelial cell development (ortholog); gene expression (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); Dwarfism (ortholog); esophageal cancer (ortholog); FOUND IN cell surface (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955436 528038 636194 - 102008025 AGCD01033549;AGCD01033550;GBDK01234891;XM_005389121;XM_013516700;XM_013516701 XP_005389178;XP_013372154;XP_013372155 MODEL 150537111 snorna SNORA79 Small nucleolar RNA SNORA79 10281190 protein-coding LOC106147439 translation initiation factor IF-2-like NW_004955559 1317431 1318953 + 106147439 AGCD01073640;GBDF01164377;XM_013509007 XP_013364461 MODEL 8707787 pseudo LOC102007358 olfactory receptor 5W2-like NW_004955511 700104 706604 - 102007358 AGCD01066338;AGCD01066339;XM_005408208 MODEL 151707879 snorna SNORD53_SNORD92 Small nucleolar RNA SNORD53/SNORD92 8968364 ncrna LOC102019469 uncharacterized LOC102019469 NW_004955407 32676882 32682680 - 102019469 AGCD01007680;GBDI01275175;XR_001231132;XR_001231133;XR_001231134 MODEL 8934635 pseudo LOC102011221 DNA-directed RNA polymerase II subunit RPB3 pseudogene NW_004955426 24102744 24103895 + 102011221 AGCD01026668 MODEL 730469170 snorna SNORA51 Small nucleolar RNA SNORA51 8896292 ncrna LOC102004079 uncharacterized LOC102004079 NW_004955493 3577628 3582021 + 102004079 AGCD01061001;XR_264080 MODEL 8980265 ncrna LOC102022351 uncharacterized LOC102022351 NW_004955404 2603157 2612436 + 102022351 AGCD01003263;GBDK01427892;XR_001234596;XR_001234598;XR_001234599;XR_001234600;XR_001234602;XR_001234603;XR_001234604;XR_001234605;XR_001234606;XR_001234607;XR_001234608 MODEL 8995761 protein-coding Epha6 EPH receptor A6 PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog) NW_004955407 398415 1220542 - 102012926 AGCD01006740;AGCD01006741;AGCD01006742;AGCD01006743;AGCD01006744;AGCD01006745;AGCD01006746;AGCD01006747;AGCD01006748;AGCD01006749;AGCD01006750;AGCD01006751;AGCD01006752;AGCD01006753;AGCD01006754;AGCD01006755;AGCD01006756;AGCD01006757;AGCD01006758;AGCD01006759;AGCD01006760;AGCD01006761;AGCD01006762;AGCD01006763;AGCD01006764;AGCD01006765;AGCD01006766;AGCD01006767;AGCD01006768;AGCD01006769;AGCD01006770;AGCD01006771;AGCD01006772;AGCD01006773;AGCD01006774;AGCD01006775;AGCD01006776;AGCD01006777;AGCD01006778;AGCD01006779;AGCD01006780;AGCD01006781;AGCD01006782;AGCD01006783;AGCD01006784;AGCD01006785;AGCD01006786;GBCB01033975;XM_005375498;XM_005375499;XM_005375500;XM_013503527 XP_005375555;XP_005375556;XP_005375557;XP_013358981 MODEL 8745866 protein-coding Bub3 BUB3 mitotic checkpoint protein INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); protein localization to kinetochore (ortholog); regulation of chromosome segregation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN kinetochore (ortholog); mitotic checkpoint complex (ortholog); nucleoplasm (ortholog) NW_004955477 1305937 1319330 + 102026634 AGCD01055504;GBDF01043135;XM_005401960;XM_005401961 XP_005402017;XP_005402018 MODEL 39133831 ribozyme RNase_MRP RNase MRP 39133240 snrna U4 U4 spliceosomal RNA 8806386 protein-coding LOC102004834 uncharacterized LOC102004834 NW_004955426 391229 395014 + 102004834 AGCD01026001;GBDF01177168;XM_005386119;XM_005386120;XR_001234323 XP_005386176;XP_005386177 MODEL 8757357 ncrna LOC102008896 uncharacterized LOC102008896 NW_004955547 2750784 2754477 + 102008896 AGCD01072294;GBBH01190398;XR_001232234;XR_001232235;XR_264910 MODEL 8998739 protein-coding LOC102008162 uncharacterized protein KIAA1211 NW_004955447 14674162 14715780 - 102008162 AGCD01041019;AGCD01041020;GBBH01097866;GBDI01055287;XM_013518481 XP_013373935 MODEL 8829266 protein-coding Snx16 sorting nexin 16 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endosome to lysosome transport (ortholog); protein targeting to lysosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN early endosome (ortholog); endosome membrane (ortholog); late endosome (ortholog) NW_004955417 159369 209166 - 102025356 AGCD01017788;AGCD01017789;AGCD01017790;AGCD01017791;AGCD01017792;AGCD01017793;GBCB01086124;XM_005381722;XM_005381723 XP_005381779;XP_005381780 MODEL 8871419 protein-coding Rrad RRAD, Ras related glycolysis inhibitor and calcium channel regulator ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of heart rate by epinephrine-norepinephrine (ortholog); regulation of cardiac muscle contraction by calcium ion signaling (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Cardiac Arrhythmias (ortholog); Cardiomegaly (ortholog); FOUND IN plasma membrane (ortholog); T-tubule (ortholog) NW_004955433 23426258 23439094 - 102016839 AGCD01031960;AGCD01031961;AGCD01031962;AGCD01031963;GBCE01160070;GBCQ01004333;XM_013516112 XP_013371566 MODEL 8947834 protein-coding Sf3b1 splicing factor 3b subunit 1 ENCODES a protein that exhibits chromatin binding (ortholog); pre-mRNA binding (ortholog); splicing factor binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); blastocyst formation (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN B-WICH complex (ortholog); catalytic step 2 spliceosome (ortholog); chromatin (ortholog) NW_004955403 3134960 3163395 + 102025074 AGCD01001754;GBCC01000595;XM_005373873 XP_005373930 MODEL 39131521 protein-coding SRD5A3 steroid 5 alpha-reductase 3 8919326 protein-coding Wdfy3 WD repeat and FYVE domain containing 3 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN aggrephagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) NW_004955474 4764902 5045421 + 102025904 AGCD01054386;AGCD01054387;AGCD01054388;AGCD01054389;AGCD01054390;AGCD01054391;AGCD01054392;GBDK01190489;XM_005401374;XM_013502725;XM_013502726;XM_013502727;XM_013502728;XM_013502729;XM_013502730 XP_005401431;XP_013358179;XP_013358180;XP_013358181;XP_013358182;XP_013358183;XP_013358184 MODEL 8914120 protein-coding LOC102012056 basic proline-rich protein-like NW_004955406 37370333 37389779 + 102012056 AGCD01006576;GBDF01003978;XM_005375168;XR_001236862 XP_005375225 MODEL 8883496 protein-coding Prim2 DNA primase subunit 2 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); DNA-directed RNA polymerase activity (ortholog); DNA/RNA hybrid binding (ortholog); INVOLVED IN DNA replication initiation (ortholog); DNA replication, synthesis of primer (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN alpha DNA polymerase:primase complex (ortholog); nucleoplasm (ortholog) NW_004955502 2642328 2898919 - 102025706 AGCD01064302;AGCD01064303;AGCD01064304;AGCD01064305;GBDJ01401975;XM_005406880;XM_005406881;XM_013505840;XM_013505841 XP_005406937;XP_005406938;XP_013361294;XP_013361295 MODEL 39131897 snrna U1 U1 spliceosomal RNA 8846914 protein-coding LOC102003039 zinc finger protein 14-like NW_004955499 300856 321376 + 102003039 AGCD01063215;AGCD01063216;AGCD01063217;AGCD01063218;GBDI01054273;XM_013505563;XM_013505564;XM_013505565;XM_013505566 XP_013361017;XP_013361018;XP_013361019;XP_013361020 MODEL 8955262 protein-coding Timm13 translocase of inner mitochondrial membrane 13 INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Familial Prostate Cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space chaperone complex (ortholog); mitochondrion (ortholog) NW_004955495 5781024 5782300 + 102013516 AGCD01062029;GBDF01047197;XM_005405902 XP_005405959 MODEL 8961285 ncrna LOC102013261 uncharacterized LOC102013261 NW_004955410 25529093 25547298 + 102013261 AGCD01011158;AGCD01011159;GBDJ01166591;XR_001232700;XR_259865 MODEL 8791315 protein-coding LOC102018249 nuclear RNA export factor 2-like NW_004956329 1022 3854 - 102018249 AGCD01079439;GBDK01180906;XM_005415196 XP_005415253 MODEL 730468944 snorna SNORA17 Small nucleolar RNA SNORA17 8843955 protein-coding Tradd TNFRSF1A associated via death domain ENCODES a protein that exhibits death domain binding (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to tumor necrosis factor (ortholog); extrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN ceramide signaling pathway; Toll-like receptor signaling pathway; Trail mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Liver Reperfusion Injury (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955484 9456268 9462425 + 102014361 AGCD01058415;GBDK01143327;XM_005403692;XM_013503962;XM_013503963 XP_005403749;XP_013359416;XP_013359417 MODEL 8750762 protein-coding Rbp1 retinol binding protein 1 ENCODES a protein that exhibits all-trans-retinol binding (ortholog); retinol binding (ortholog); INVOLVED IN lipid homeostasis (ortholog); lipid storage (ortholog); regulation of granulocyte differentiation (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); basal cell carcinoma (ortholog); carcinoma (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955508 6046738 6072202 + 102024936 AGCD01065912;GBDJ01081692;XM_005407782;XM_013506285 XP_005407839;XP_013361739 MODEL 8747795 ncrna LOC102019827 uncharacterized LOC102019827 NW_004955508 4370021 4372570 - 102019827 AGCD01065866;GBDK01166181;XR_264395 MODEL 9042344 protein-coding Rgs11 regulator of G protein signaling 11 ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); dendrite terminus (ortholog) NW_004955442 16905982 16914772 + 102004206 AGCD01037922;AGCD01037923;GBDF01207822;XM_005391662;XM_005391663;XM_005391664;XM_005391665;XM_005391666 XP_005391719;XP_005391720;XP_005391721;XP_005391722;XP_005391723 MODEL 8912484 protein-coding Ppm1g protein phosphatase, Mg2+/Mn2+ dependent 1G ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955469 9344968 9350123 - 102004592 AGCD01052498;GBDJ01076537;GBDJ01076538;XM_005400501 XP_005400558 MODEL 8826901 protein-coding Spata6l spermatogenesis associated 6 like ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955434 8893132 8956994 - 102024946 AGCD01032278;AGCD01032279;AGCD01032280;AGCD01032281;GBBH01089885;XM_005388637;XM_005388638;XM_005388639;XM_005388640 XP_005388694;XP_005388695;XP_005388696;XP_005388697 MODEL 8767681 protein-coding LOC102010067 basic proline-rich protein-like NW_004955424 20327818 20328443 - 102010067 AGCD01024848;GBBH01018048;GBDK01212327;XM_013514645 XP_013370099 MODEL 8960680 ncrna LOC102016307 uncharacterized LOC102016307 NW_004955436 21128023 21132342 - 102016307 AGCD01034048;GBDI01232526;XR_261804 MODEL 8861930 protein-coding Phb1 prohibitin 1 ENCODES a protein that exhibits complement component C3a binding (ortholog); complement component C3b binding (ortholog); enzyme binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); antiviral innate immune response (ortholog); B cell activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); early endosome (ortholog) NW_004955451 12110290 12119870 + 102025749 AGCD01043375;GBCB01000499;XM_005394212;XM_005394213 XP_005394269;XP_005394270 MODEL 9053466 protein-coding Trmu tRNA mitochondrial 2-thiouridylase ENCODES a protein that exhibits tRNA-5-taurinomethyluridine 2-sulfurtransferase activity (ortholog); ASSOCIATED WITH aminoglycoside-induced deafness (ortholog); attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrion (ortholog) NW_004955413 30440014 30453860 + 102012183 AGCD01014608;GBDF01131064;XM_005379512;XM_013511394;XM_013511395;XM_013511396 XP_005379569;XP_013366848;XP_013366849;XP_013366850 MODEL 730469434 snorna SNORA8 Small nucleolar RNA SNORA8 8951452 protein-coding Plekhf1 pleckstrin homology and FYVE domain containing 1 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); INVOLVED IN endosome organization (ortholog); positive regulation of autophagy (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN endosome (ortholog); lysosome (ortholog) NW_004955468 7934024 7943499 - 102012182 AGCD01052017;GBBH01126266;XM_005400111 XP_005400168 MODEL 730468926 snorna SNORA51 Small nucleolar RNA SNORA51 8842892 pseudo LOC102004081 cationic trypsin-3-like NW_004955494 1233143 1236496 + 102004081 AGCD01061392 MODEL 9002610 pseudo LOC102022352 pescadillo homolog pseudogene NW_004955404 24712579 24718093 - 102022352 AGCD01003827 MODEL 9066488 protein-coding Sec61a2 SEC61 translocon subunit alpha 2 ENCODES a protein that exhibits ribosome binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955462 166423 189592 + 102005235 AGCD01049071;GBDK01237240;XM_005398076 XP_005398133 MODEL 8785101 pseudo LOC102010851 transmembrane protein 69 pseudogene NW_004955402 725985 734220 - 102010851 AGCD01000031 MODEL 10182145 ncrna LOC106150336 uncharacterized LOC106150336 NW_004955472 1698010 1699112 + 106150336 AGCD01053409;GBDK01024649;XR_001237082 MODEL 8907387 protein-coding Pinx1 PIN2 (TERF1) interacting telomerase inhibitor 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); telomerase inhibitor activity (ortholog); telomerase RNA binding (ortholog); INVOLVED IN mitotic metaphase chromosome alignment (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); kinetochore (ortholog); nuclear chromosome (ortholog) NW_004955403 52284378 52361924 - 102024413 AGCD01003003;GBCB01056282;XM_005373807;XM_005373809 XP_005373864;XP_005373866 MODEL 39131535 protein-coding RAMP2 receptor activity modifying protein 2 8709291 protein-coding Pola2 DNA polymerase alpha 2, accessory subunit ENCODES a protein that exhibits DNA-directed DNA polymerase activity (ortholog); INVOLVED IN DNA replication (ortholog); DNA replication initiation (ortholog); DNA replication, synthesis of primer (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN alpha DNA polymerase:primase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 19939971 19963753 - 102012445 AGCD01023049;AGCD01023050;GBDF01279643;XM_005384504;XM_005384505;XM_005384506 XP_005384561;XP_005384562;XP_005384563 MODEL 8820774 protein-coding Slc35a1 solute carrier family 35 member A1 ENCODES a protein that exhibits antiporter activity (ortholog); CMP-N-acetylneuraminate transmembrane transporter activity (ortholog); INVOLVED IN CMP-N-acetylneuraminate transmembrane transport (ortholog); N-acetylneuraminate metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); congenital disorder of glycosylation type IIf (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); membrane (ortholog) NW_004955411 14443957 14469590 + 102027388 AGCD01011918;AGCD01011919;AGCD01011920;GBDF01017200;XM_005377728;XM_005377729;XM_013510792 XP_005377785;XP_005377786;XP_013366246 MODEL 8892956 ncrna LOC102008163 uncharacterized LOC102008163 NW_004955448 3515139 3550351 + 102008163 AGCD01041335;GBDF01279163;XR_262458 MODEL 9035208 pseudo LOC102008897 60S ribosomal protein L36a-like NW_004955550 1877604 1877922 - 102008897 AGCD01072592 MODEL 8863113 protein-coding LOC102005897 keratin-associated protein 10-11-like NW_004955407 41627363 41628512 + 102005897 AGCD01007874;XM_005375888 XP_005375945 MODEL 8822187 protein-coding Rraga Ras related GTP binding A ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); phosphoprotein binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytoplasm (ortholog); FNIP-folliculin RagC/D GAP (ortholog); GATOR1 complex (ortholog) NW_004955434 21509528 21510885 + 102025158 AGCD01032632;GBBH01032722;GBCQ01004306;XM_005388726 XP_005388783 MODEL 9022295 protein-coding Prss36 serine protease 36 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955493 7979080 7985028 - 102020813 AGCD01061245;AGCD01061246;AGCD01061247;GBBH01102280;GBBH01102285;XM_013504884 XP_013360338 MODEL 9007007 pseudo LOC102007361 uncharacterized LOC102007361 NW_004955515 1742608 1754797 - 102007361 AGCD01067234;AGCD01067235 MODEL 8833621 protein-coding Srd5a3 steroid 5 alpha-reductase 3 ENCODES a protein that exhibits 3-oxo-5-alpha-steroid 4-dehydrogenase (NADP+) activity (ortholog); oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (ortholog); polyprenal reductase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); dolichyl monophosphate biosynthetic process (ortholog); ASSOCIATED WITH antithrombin III deficiency (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955447 15578661 15588218 - 102007064 AGCD01041060;GBCC01015353;GBCE01134156;XM_005392895 XP_005392952 MODEL 8862196 protein-coding LOC102008527 olfactory receptor 52N4-like NW_004955414 21703835 21704818 + 102008527 AGCD01015429;XM_013511734 XP_013367188 MODEL 8788630 protein-coding Pth1r parathyroid hormone 1 receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); parathyroid hormone receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); bone mineralization (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; G protein mediated signaling pathway via Galphas family; parathyroid hormone signaling pathway; ASSOCIATED WITH brachydactyly type E1 (ortholog); chondrodysplasia Blomstrand type (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) NW_004955420 25274269 25291984 - 102019506 AGCD01021348;GBDF01221234;XM_013513585 XP_013369039 MODEL 8936139 protein-coding Wdfy4 WDFY family member 4 INVOLVED IN antigen processing and presentation (ortholog); CD8-positive, alpha-beta T cell activation (ortholog); cellular response to virus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955556 1178970 1421139 - 102004981 AGCD01073187;AGCD01073188;AGCD01073189;AGCD01073190;AGCD01073191;AGCD01073192;AGCD01073193;AGCD01073194;GBDK01194697;XM_013508790;XM_013508791;XM_013508792;XM_013508793;XM_013508794;XM_013508795;XM_013508796;XM_013508797;XM_013508798 XP_013364244;XP_013364245;XP_013364246;XP_013364247;XP_013364248;XP_013364249;XP_013364250;XP_013364251;XP_013364252 MODEL 8902229 ncrna LOC102006227 uncharacterized LOC102006227 NW_004955465 7168095 7203880 + 102006227 AGCD01050456;AGCD01050457;GBBH01168662;XR_263249;XR_263250 MODEL 8714078 ncrna LOC102011654 uncharacterized LOC102011654 NW_004955476 4365503 4385423 - 102011654 AGCD01055280;GBDI01309143;XR_001230807;XR_001230808;XR_001230809;XR_001230810 MODEL 730468956 snorna SNORA17 Small nucleolar RNA SNORA17 39133829 ribozyme RNase_MRP RNase MRP 9033730 protein-coding Rp1 RP1 axonemal microtubule associated ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN axoneme assembly (ortholog); cellular response to light stimulus (ortholog); photoreceptor cell development (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Ataxia (ortholog); central sleep apnea (ortholog); FOUND IN axoneme (ortholog); ciliary tip (ortholog); cilium (ortholog) NW_004955454 13781556 14082310 + 102008695 AGCD01045453;AGCD01045454;AGCD01045455;AGCD01045456;AGCD01045457;AGCD01045458;AGCD01045459;AGCD01045460;AGCD01045461;GBBH01064691;GBDI01218824;XM_013520200 XP_013375654 MODEL 39133243 snrna U4 U4 spliceosomal RNA 8720163 protein-coding Traf1 TNF receptor associated factor 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); thioesterase binding (ortholog); INVOLVED IN negative regulation of non-canonical NF-kappaB signal transduction (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of pyroptotic inflammatory response (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955419 7117869 7145274 + 102021974 AGCD01019874;GBDK01090336;XM_013513240;XM_013513241;XM_013513242;XR_001233625;XR_001233626 XP_013368694;XP_013368695;XP_013368696 MODEL 730468969 snorna SNORA36 Small nucleolar RNA SNORA36 family 8823826 ncrna LOC102004835 uncharacterized LOC102004835 NW_004955502 6301282 6361720 - 102004835 AGCD01064397;AGCD01064398;AGCD01064399;GBDF01305427;XR_264266 MODEL 8835388 protein-coding Phb2 prohibitin 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); B cell activation (ortholog); cell migration (ortholog); PARTICIPATES IN estrogen signaling pathway; mitochondria fusion pathway; tamoxifen pharmacodynamics pathway; ASSOCIATED WITH Brain Injuries (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN axon (ortholog); cell periphery (ortholog); cell surface (ortholog) NW_004955413 4557969 4563697 - 102010570 AGCD01013621;GBDJ01024188;XM_005378852 XP_005378909 MODEL 8925037 pseudo LOC102019473 40S ribosomal protein S2 pseudogene NW_004955407 37229074 37229776 - 102019473 AGCD01007779 MODEL 8839916 protein-coding LOC102011222 translation initiation factor IF-2-like NW_004955504 1462038 1467322 + 102011222 AGCD01064839;AGCD01064840;GBDI01357943;GBDK01076347;XM_013505915 XP_013361369 MODEL 39131901 snrna U1 U1 spliceosomal RNA 8776868 pseudo LOC102003040 peptidyl-prolyl cis-trans isomerase FKBP1A pseudogene NW_004955424 23204844 23205245 + 102003040 AGCD01025009 MODEL 8882064 ncrna LOC102013262 uncharacterized LOC102013262 NW_004955462 13861908 13874784 + 102013262 AGCD01049434;GBDF01307845;XR_001236609 MODEL 10065705 ncrna LOC106147440 uncharacterized LOC106147440 NW_004955408 14367950 14384000 + 106147440 AGCD01008394;GBDI01054270;XR_001232342 MODEL 8755734 protein-coding Bud13 BUD13 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Achalasia-Progeroid Syndrome (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955412 18095069 18113386 - 102020228 AGCD01012924;AGCD01012925;AGCD01012926;GBDF01156360;XM_013511204;XM_013511205 XP_013366658;XP_013366659 MODEL 8965077 protein-coding Plekhf2 pleckstrin homology and FYVE domain containing 2 ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); transport vesicle (ortholog) NW_004955417 11261712 11282038 + 102003868 AGCD01018128;AGCD01018129;GBDF01183993;XM_005381827 XP_005381884 MODEL 8962793 pseudo LOC102018254 eukaryotic translation initiation factor 1 pseudogene NW_004955452 16336794 16337133 + 102018254 AGCD01044507 MODEL 8810905 ncrna LOC102022353 uncharacterized LOC102022353 NW_004955453 10850833 10853572 - 102022353 AGCD01044791;GBDF01234833;XR_001236148;XR_262727 MODEL 8791845 protein-coding Epha7 EPH receptor A7 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); chemorepellent activity (ortholog); ephrin receptor binding (ortholog); INVOLVED IN brain development (ortholog); branching morphogenesis of a nerve (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) NW_004955411 19652146 19815418 - 102012295 AGCD01012039;AGCD01012040;AGCD01012041;AGCD01012042;GBCQ01095584;XM_005377770;XM_005377771;XM_005377772;XM_005377773 XP_005377827;XP_005377828;XP_005377829;XP_005377830 MODEL 8935942 protein-coding Sf3b2 splicing factor 3b subunit 2 INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955422 19242041 19266479 - 102020130 AGCD01022989;AGCD01022990;GBBH01033396;GBDF01043546;XM_005384431 XP_005384488 MODEL 8905285 protein-coding LOC102019828 sperm motility kinase 2B-like NW_004955429 15038189 15055490 - 102019828 AGCD01028788;GBDJ01214873;XM_005387030;XM_013515521;XM_013515522;XM_013515523;XM_013515524;XM_013515525;XM_013515526;XM_013515527;XM_013515528;XM_013515529;XM_013515530;XM_013515531;XM_013515532;XM_013515533;XM_013515534;XM_013515535;XM_013515536;XM_013515537;XM_013515538 XP_005387087;XP_013370975;XP_013370976;XP_013370977;XP_013370978;XP_013370979;XP_013370980;XP_013370981;XP_013370982;XP_013370983;XP_013370984;XP_013370985;XP_013370986;XP_013370987;XP_013370988;XP_013370989;XP_013370990;XP_013370991;XP_013370992 MODEL 8867299 ncrna LOC102016312 uncharacterized LOC102016312 NW_004955439 4522810 4578321 + 102016312 AGCD01035713;GBDF01114321;XR_261972 MODEL 8881967 ncrna LOC102010070 uncharacterized LOC102010070 NW_004955500 4830109 4994911 - 102010070 AGCD01063812;AGCD01063813;AGCD01063814;AGCD01063815;AGCD01063816;AGCD01063817;AGCD01063818;AGCD01063819;AGCD01063820;GBBH01147088;XR_001231473;XR_001231474;XR_001231475;XR_001231476;XR_001231477;XR_001231478;XR_001231479;XR_001231480;XR_001231481;XR_001231482;XR_001231483;XR_264227 MODEL 8735455 protein-coding Snx17 sorting nexin 17 ENCODES a protein that exhibits low-density lipoprotein particle receptor binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955469 9334562 9340766 + 102029386 AGCD01052498;GBDI01076358;XM_005400489;XM_005400490 XP_005400546;XP_005400547 MODEL 8724016 ncrna LOC102012057 uncharacterized LOC102012057 NW_004955406 39330833 39331560 + 102012057 AGCD01006626;GBDK01343682;XR_259526 MODEL 8735588 trna trnA(tgc) tRNA-Ala MT 5014 5083 - 15822221 9010916 protein-coding Polb DNA polymerase beta ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); class I DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); damaged DNA binding (ortholog); INVOLVED IN apoptotic process (ortholog); base-excision repair (ortholog); base-excision repair, gap-filling (ortholog); ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule (ortholog) NW_004955536 542179 595198 - 102008456 AGCD01070729;AGCD01070730;AGCD01070731;AGCD01070732;GBDF01009059;XM_005410509 XP_005410566 MODEL 730469024 snorna SNORA8 Small nucleolar RNA SNORA8 9022984 protein-coding Timm17a translocase of inner mitochondrial membrane 17A ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of protein processing (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); TIM23 mitochondrial import inner membrane translocase complex (ortholog) NW_004955406 38020886 38031651 + 102020305 AGCD01006582;GBDF01003865;XM_005375197 XP_005375254 MODEL 730469121 snorna SNORA17 Small nucleolar RNA SNORA17 10265533 protein-coding Prima1 proline rich membrane anchor 1 ENCODES a protein that exhibits enzyme binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN membrane raft (ortholog); plasma membrane (ortholog) NW_004955438 15835641 15903484 - 106149170 AGCD01035385;AGCD01035386;AGCD01035387;AGCD01035388;GBDI01385092;GBDJ01044136;XM_013517273 XP_013372727 MODEL 8756076 protein-coding LOC102005515 zinc finger protein 350 NW_004955558 546358 562360 + 102005515 AGCD01073376;GBBH01131689;XM_005412662;XM_005412664;XM_005412665;XM_005412666;XM_005412667;XM_005412668;XM_013508866;XM_013508867 XP_005412719;XP_005412721;XP_005412722;XP_005412723;XP_005412724;XP_005412725;XP_013364320;XP_013364321 MODEL 8729440 protein-coding Ppm1h protein phosphatase, Mg2+/Mn2+ dependent 1H ENCODES a protein that exhibits identical protein binding (ortholog); phosphoprotein phosphatase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) NW_004955458 9742629 9899167 - 102007198 AGCD01047661;AGCD01047662;AGCD01047663;AGCD01047664;AGCD01047665;GBBH01091029;XM_013520940 XP_013376394 MODEL 9031659 protein-coding Spata7 spermatogenesis associated 7 INVOLVED IN microtubule cytoskeleton organization (ortholog); photoreceptor cell maintenance (ortholog); protein localization to photoreceptor connecting cilium (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); cardiovascular system disease (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); ciliary transition zone (ortholog) NW_004955438 11033089 11069178 + 102005509 AGCD01035223;AGCD01035224;GBDF01008623;XM_005390253;XM_005390254;XM_005390255 XP_005390310;XP_005390311;XP_005390312 MODEL 8968354 protein-coding Rp1l1 RP1 like 1 INVOLVED IN photoreceptor cell development (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cone-rod dystrophy (ortholog); Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); FOUND IN axoneme (ortholog); photoreceptor connecting cilium (ortholog); photoreceptor outer segment (ortholog) NW_004955403 52180612 52200569 - 102018793 AGCD01003003;GBDF01013182;XM_005373909 XP_005373966 MODEL 8739478 protein-coding Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); 1-phosphatidylinositol-5-phosphate 4-kinase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); autophagosome-lysosome fusion (ortholog); megakaryocyte development (ortholog); PARTICIPATES IN phosphoinositide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN autophagosome (ortholog); cell body (ortholog); cytoplasm (ortholog) NW_004955429 6231135 6399672 + 102012012 AGCD01028545;AGCD01028546;AGCD01028547;GBDF01014622;XM_005387233 XP_005387290 MODEL 8732362 protein-coding LOC102019830 membrane-spanning 4-domains subfamily A member 4A-like NW_004955511 4899748 4924827 - 102019830 AGCD01066538;AGCD01066539;GBCE01044600;XM_005408080 XP_005408137 MODEL 8889416 protein-coding Rbp2 retinol binding protein 2 ENCODES a protein that exhibits binding (ortholog); lipid binding (ortholog); molecular carrier activity (ortholog); INVOLVED IN retinoid metabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; FOUND IN cytosol (ortholog); synaptic ribbon (ortholog) NW_004955508 6111558 6135929 + 102025271 AGCD01065913;GBCQ01107672;XM_005407783 XP_005407840 MODEL 8712997 protein-coding Ramp2 receptor activity modifying protein 2 ENCODES a protein that exhibits adrenomedullin binding (ortholog); adrenomedullin receptor activity (ortholog); coreceptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adherens junction assembly (ortholog); adrenomedullin receptor signaling pathway (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); adult respiratory distress syndrome (ortholog); Cardiomegaly (ortholog); FOUND IN adrenomedullin receptor complex (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955451 16584742 16586093 + 102022993 AGCD01043695;GBCB01022684;GBDJ01020216;XM_005394475 XP_005394532 MODEL 8842804 protein-coding Slc35a2 solute carrier family 35 member A2 ENCODES a protein that exhibits UDP-galactose transmembrane transporter activity (ortholog); INVOLVED IN UDP-galactose transmembrane transport (ortholog); ASSOCIATED WITH aspiration pneumonia (ortholog); atrial heart septal defect (ortholog); autistic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955543 434265 443460 - 102027678 AGCD01071585;GBBH01185436;XM_005411289;XM_013508172;XM_013508173 XP_005411346;XP_013363626;XP_013363627 MODEL 8717173 protein-coding LOC102008165 filaggrin-2 NW_004955589 115942 127045 + 102008165 AGCD01076155;AGCD01076156;GBCC01029912;XM_005414527;XM_013509950;XM_013509951 XP_005414584;XP_013365404;XP_013365405 MODEL 8877881 pseudo LOC102008902 nucleolar protein 58 pseudogene NW_004955446 12111400 12115335 + 102008902 AGCD01040224;AGCD01040225 MODEL 8899852 protein-coding LOC102005899 uncharacterized LOC102005899 NW_004955408 4190159 4193209 - 102005899 AGCD01008091;GBDI01371406;XM_005376117 XP_005376174 MODEL 8815095 protein-coding Prss37 serine protease 37 INVOLVED IN binding of sperm to zona pellucida (ortholog); cell migration (ortholog); positive regulation of acrosome reaction (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955494 1742104 1747310 + 102013098 AGCD01061422;GBDF01008323;XM_005405400;XM_005405401 XP_005405457;XP_005405458 MODEL 8708155 protein-coding Rragb Ras related GTP binding B ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); GTPase binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to leucine starvation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); Gtr1-Gtr2 GTPase complex (ortholog); lysosomal membrane (ortholog) NW_004955475 2662969 2692253 + 102026858 AGCD01054817;GBBH01019101;XM_005401539;XM_005401540;XM_013502883 XP_005401596;XP_005401597;XP_013358337 MODEL 8779865 pseudo LOC102007362 ATM interactor pseudogene NW_004955516 35910 38266 + 102007362 AGCD01067367 MODEL 730468999 snorna SNORA51 Small nucleolar RNA SNORA51 8940040 protein-coding LOC102004083 BPI fold-containing family A member 2 NW_004955422 28150582 28155982 - 102004083 AGCD01023344;XM_013513841 XP_013369295 MODEL 9062386 protein-coding Srebf1 sterol regulatory element binding transcription factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cellular response to insulin stimulus (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN mTOR signaling pathway; sterol regulatory element-binding protein signaling pathway; triacylglycerol metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcoholic hepatitis (ortholog); atherosclerosis (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955577 171425 183669 + 102016535 AGCD01075383;AGCD01075384;GBCE01033218;XM_013509620 XP_013365074 MODEL 8833132 ncrna LOC102013263 uncharacterized LOC102013263 NW_004955410 30910864 30939783 - 102013263 AGCD01011313;GBDJ01050962;XR_259888 MODEL 10236561 ncrna LOC106147441 uncharacterized LOC106147441 NW_004955559 730730 731738 + 106147441 AGCD01073609;GBCQ01130735;XR_001232343 MODEL 9015813 protein-coding Pth2 parathyroid hormone 2 NW_004955559 1409966 1414881 + 102017514 AGCD01073644;GBDF01104303;XM_005412886;XM_013509049 XP_005412943;XP_013364503 MODEL 8827207 ncrna LOC102010852 uncharacterized LOC102010852 NW_004955450 14836986 14845311 - 102010852 AGCD01042764;GBDF01009911;XR_262554;XR_262555 MODEL 730469254 snorna SNORA8 Small nucleolar RNA SNORA8 8817908 protein-coding LOC102006228 histone H3 ENCODES a protein that exhibits structural constituent of chromatin (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); nucleosome assembly (ortholog); FOUND IN chromatin (ortholog); extracellular exosome (ortholog); nucleoplasm (ortholog) NW_004955465 13338289 13339268 + 102006228 AGCD01050601;XM_005398948 XP_005399005 MODEL 9016186 pseudo LOC102018255 ubiquitin-60S ribosomal protein L40 pseudogene NW_004955405 9748083 9748858 - 102018255 AGCD01004792 MODEL 8840875 protein-coding Rnaseh1 ribonuclease H1 ENCODES a protein that exhibits identical protein binding (ortholog); RNA-DNA hybrid ribonuclease activity (ortholog); INVOLVED IN mitochondrial DNA replication (ortholog); ASSOCIATED WITH autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 2 (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) NW_004955487 3808426 3815682 + 102017130 AGCD01059294;GBDF01082488;XM_005404371 XP_005404428 MODEL 8867158 protein-coding Sec61b SEC61 translocon subunit beta ENCODES a protein that exhibits epidermal growth factor binding (ortholog); ribosome binding (ortholog); INVOLVED IN ERAD pathway (ortholog); retrograde protein transport, ER to cytosol (ortholog); SRP-dependent cotranslational protein targeting to membrane, translocation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 16 (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) NW_004955419 26414891 26423260 - 102008858 AGCD01020408;GBCQ01000947;XM_005382941 XP_005382998 MODEL 39133244 snrna U4 U4 spliceosomal RNA 730468979 snorna SNORA36 Small nucleolar RNA SNORA36 family 8818566 pseudo LOC102008528 density-regulated protein pseudogene NW_004955415 15527746 15528569 + 102008528 AGCD01016348 MODEL 8863437 ncrna LOC102019478 uncharacterized LOC102019478 NW_004955409 23587939 23595263 - 102019478 AGCD01010068;GBDI01355144;XR_001232654 MODEL 10139373 ncrna LOC106150337 uncharacterized LOC106150337 NW_004955402 10721653 10722383 - 106150337 AGCD01000288;GBDJ01161572;XR_001237098 MODEL 39131922 snrna U1 U1 spliceosomal RNA 8974542 trna Trnaa-agc transfer RNA alanine (anticodon AGC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978814 AGCD01022921;AGCD01037757;AGCD01039088;AGCD01050627;AGCD01050631;AGCD01052488;AGCD01057602;AGCD01057606;AGCD01058153 MODEL 8988791 protein-coding Wdhd1 WD repeat and HMG-box DNA binding protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); RNA binding (ortholog); RNA polymerase binding (ortholog); INVOLVED IN heterochromatin formation (ortholog); regulation of chromosome organization (ortholog); RNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome, centromeric region (ortholog); nucleoplasm (ortholog) NW_004955409 8539617 8587537 + 102028723 AGCD01009420;GBDF01249434;XM_005376757;XM_005376758 XP_005376814;XP_005376815 MODEL 8745406 protein-coding Plekhg1 pleckstrin homology and RhoGEF domain containing G1 ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955439 10636444 10755814 - 102004645 AGCD01035887;GBCE01021171;XM_005390587;XM_013517387;XM_013517388 XP_005390644;XP_013372841;XP_013372842 MODEL 9012846 pseudo LOC102022354 phospholipase DDHD2-like NW_004955454 3950247 3952158 + 102022354 AGCD01045106 MODEL 39131510 protein-coding PRIMA1 proline rich membrane anchor 1 8798443 protein-coding Epha8 EPH receptor A8 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN axon guidance (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN early endosome membrane (ortholog); neuron projection (ortholog); plasma membrane (ortholog) NW_004955452 2702277 2729161 + 102012603 AGCD01043903;GBDF01242136;XM_013519449;XR_001236014 XP_013374903 MODEL 9065069 protein-coding Ppm1j protein phosphatase, Mg2+/Mn2+ dependent 1J ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); Mesothelioma (ortholog) NW_004955435 16124087 16129296 - 102006493 AGCD01033295;GBDF01004408;XM_005388968 XP_005389025 MODEL 8993565 pseudo LOC102016313 6.8 kDa mitochondrial proteolipid pseudogene NW_004955441 7081387 7081567 - 102016313 AGCD01036950 MODEL 8843804 ncrna LOC102010072 uncharacterized LOC102010072 NW_004955426 20756048 20787650 - 102010072 AGCD01026575;GBBH01059919;XR_001234330;XR_001234331;XR_001234332 MODEL 8837536 protein-coding Ramp3 receptor activity modifying protein 3 ENCODES a protein that exhibits adrenomedullin receptor activity (ortholog); amylin receptor activity (ortholog); coreceptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adrenomedullin receptor signaling pathway (ortholog); amylin receptor 3 signaling pathway (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN adrenomedullin receptor complex (ortholog); amylin receptor complex 3 (ortholog); cell surface (ortholog) NW_004955456 7159845 7168718 - 102014115 AGCD01046391;GBBH01141274;XM_005396645 XP_005396702 MODEL 8769366 protein-coding Phc1 polyhomeotic homolog 1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); cellular response to retinoic acid (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); dilated cardiomyopathy (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 6156934 6176460 - 102023793 AGCD01013710;GBBH01033996;XM_005378897 XP_005378954 MODEL 9061556 protein-coding Rbp3 retinol binding protein 3 ENCODES a protein that exhibits retinol binding (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH autoimmune disease (ortholog); cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); FOUND IN cone matrix sheath (ortholog); extracellular region (ortholog); interphotoreceptor matrix (ortholog) NW_004955556 2217528 2225369 + 102014296 AF297280;AGCD01073208;AJ427246;GBDF01290208;XM_005412613 AAK62259;CAD20284;XP_005412670 MODEL 8848102 pseudo LOC102008167 sorting nexin-2-like NW_004955402 45656377 45658152 - 102008167 AGCD01001141 MODEL 8922533 pseudo LOC102011225 olfactory receptor 1013-like NW_004955511 1812470 1813401 + 102011225 AGCD01066380 MODEL 8868943 protein-coding Snx18 sorting nexin 18 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN cleavage furrow formation (ortholog); endocytosis (ortholog); endosomal transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); colorectal cancer (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasmic side of plasma membrane (ortholog); cytoplasmic vesicle (ortholog) NW_004955446 13043821 13067933 - 102014096 AGCD01040245;GBDJ01129277;XM_005392757 XP_005392814 MODEL 153211032 snorna SNORD53_SNORD92 Small nucleolar RNA SNORD53/SNORD92 8967982 protein-coding LOC102003044 olfactory receptor 8K3-like NW_004955511 1368604 1369545 + 102003044 AGCD01066365;XM_005407956 XP_005408013 MODEL 8956377 protein-coding Slc35a3 solute carrier family 35 member A3 ENCODES a protein that exhibits UDP-galactose transmembrane transporter activity (ortholog); INVOLVED IN UDP-N-acetylglucosamine transmembrane transport (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Arthrogryposis, Impaired Intellectual Development, and Seizures (ortholog); colon adenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955435 4747981 4774250 + 102003058 AGCD01032850;AGCD01032851;GBDF01225369;XM_013516439 XP_013371893 MODEL 8968845 protein-coding LOC102011663 olfactory receptor 2T27-like NW_004955418 30179310 30182515 - 102011663 AGCD01019506;XM_013512880 XP_013368334 MODEL 10311725 ncrna LOC106147442 uncharacterized LOC106147442 NW_004955408 14319020 14325469 - 106147442 AGCD01008392;XR_001232344;XR_001232345;XR_001232347;XR_001232348 MODEL 8843378 protein-coding Pold1 DNA polymerase delta 1, catalytic subunit ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); chromatin binding (ortholog); damaged DNA binding (ortholog); INVOLVED IN base-excision repair, gap-filling (ortholog); DNA biosynthetic process (ortholog); DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); breast cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); delta DNA polymerase complex (ortholog); nucleoplasm (ortholog) NW_004955559 712375 730551 - 102020387 AGCD01073609;GBBH01102863;XM_005412790;XM_013509023;XM_013509024;XM_013509025;XM_013509026;XM_013509027 XP_005412847;XP_013364477;XP_013364478;XP_013364479;XP_013364480;XP_013364481 MODEL 8812534 protein-coding Sf3b3 splicing factor 3b subunit 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); negative regulation of protein catabolic process (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955484 3307794 3357600 + 102004819 AGCD01058172;AGCD01058173;AGCD01058174;AGCD01058175;AGCD01058176;GBDF01118268;XM_005403485 XP_005403542 MODEL 8752660 protein-coding Bud23 BUD23 rRNA methyltransferase and ribosome maturation factor ENCODES a protein that exhibits protein heterodimerization activity (ortholog); rRNA (guanine) methyltransferase activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); rRNA (guanine-N7)-methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955456 14047409 14057483 - 102024647 AGCD01046632;GBBH01060290;XM_005396771 XP_005396828 MODEL 8827655 protein-coding Traf2 TNF receptor associated factor 2 ENCODES a protein that exhibits CD40 receptor binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); CD27 signaling pathway (ortholog); CD40 signaling pathway (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; ceramide signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN CD40 receptor complex (ortholog); cell cortex (ortholog); cytoplasm (ortholog) NW_004955513 4964692 4984359 + 102025152 AGCD01066949;GBCE01188361;XM_013506639;XM_013506640 XP_013362093;XP_013362094 MODEL 9052564 protein-coding LOC102004847 interferon alpha-4-like NW_004955434 23359685 23360292 - 102004847 AGCD01032705;XM_013516392 XP_013371846 MODEL 8826751 ncrna LOC102019837 uncharacterized LOC102019837 NW_004955434 1141397 1148917 + 102019837 AGCD01032056;GBDF01005694;XR_001234772 MODEL 8963976 protein-coding Rgs12 regulator of G protein signaling 12 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); GTPase regulator activity (ortholog); INVOLVED IN negative regulation of G protein-coupled receptor signaling pathway (ortholog); termination of G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; G protein mediated signaling pathway via Galpha12/Galpha13 family; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN apical dendrite (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955514 2081575 2154414 + 102006701 AGCD01067072;AGCD01067073;AGCD01067074;GBBH01064970;GBDF01306453;XM_013506795 XP_013362249 MODEL 9000197 protein-coding Spata9 spermatogenesis associated 9 ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955418 16862007 16892303 + 102014358 AGCD01019130;AGCD01019131;GBCB01088315;XM_005382236;XM_005382239 XP_005382293;XP_005382296 MODEL 9064359 protein-coding LOC102008903 prolactin-like NW_004955576 90664 96906 - 102008903 AGCD01075255;XM_005413945 XP_005414002 MODEL 8912959 protein-coding Prss38 serine protease 38 ASSOCIATED WITH melanoma (ortholog) NW_004955581 455309 458793 - 102023756 AGCD01075673;AGCD01075674;GBDF01053786;XM_005414263 XP_005414320 MODEL 9037806 protein-coding Rragc Ras related GTP binding C ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); FNIP-folliculin RagC/D GAP (ortholog); Gtr1-Gtr2 GTPase complex (ortholog) NW_004955452 16469426 16486336 - 102019769 AGCD01044512;AGCD01044513;GBDI01180443;XM_005395231 XP_005395288 MODEL 8816460 protein-coding LOC102007363 monocarboxylate transporter 1-like NW_004955435 16195389 16213361 - 102007363 AGCD01033300;AGCD01033301;GBDF01134218;XM_005388971 XP_005389028 MODEL 8707549 protein-coding Timm17b translocase of inner mitochondrial membrane 17B ASSOCIATED WITH hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); TIM23 mitochondrial import inner membrane translocase complex (ortholog) NW_004955543 425076 430767 - 102027342 AGCD01071585;GBCE01032810;XM_005411288 XP_005411345 MODEL 10325970 ncrna LOC106150338 uncharacterized LOC106150338 NW_004955472 6750149 6778663 - 106150338 AGCD01053610;AGCD01053611;XR_001237088 MODEL 8815559 pseudo LOC102004085 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like NW_004955495 2998284 2999787 + 102004085 AGCD01061814 MODEL 8983008 pseudo LOC102013264 sorting nexin-1 pseudogene NW_004955410 705354 707003 + 102013264 AGCD01010596 MODEL 9061920 protein-coding Srebf2 sterol regulatory element binding transcription factor 2 ENCODES a protein that exhibits C-8 sterol isomerase activity (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to low-density lipoprotein particle stimulus (ortholog); cellular response to starvation (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN altered p53 signaling pathway; sterol regulatory element-binding protein signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Ascites (ortholog); atherosclerosis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) NW_004955413 27271717 27326655 + 102026308 AGCD01014500;AGCD01014501;GBDF01048386;XM_005379374 XP_005379431 MODEL 8798004 protein-coding Pth2r parathyroid hormone 2 receptor ENCODES a protein that exhibits parathyroid hormone receptor activity (ortholog); INVOLVED IN positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog) NW_004955457 6584627 6674990 - 102025875 AGCD01046846;AGCD01046847;AGCD01046848;AGCD01046849;AGCD01046850;XM_005397112 XP_005397169 MODEL 730469151 snorna SNORA17 Small nucleolar RNA SNORA17 8935185 protein-coding LOC102006229 histone H2A type 1-like NW_004955465 13334742 13337254 + 102006229 AGCD01050600;AGCD01050601;XM_005399011 XP_005399068 MODEL 8920561 pseudo LOC102018266 suppressor of cytokine signaling 2 pseudogene NW_004955409 12562778 12566437 - 102018266 AGCD01009552 MODEL 9054138 protein-coding LOC102005516 uncharacterized LOC102005516 NW_004955442 7211768 7238684 + 102005516 AGCD01037621;XM_013517646 XP_013373100 MODEL 8955375 protein-coding Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); 1-phosphatidylinositol-5-phosphate 4-kinase activity (ortholog); ATP binding (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); autophagosome-lysosome fusion (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN autophagosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955451 13842814 13856301 - 102020190 AGCD01043508;GBCE01135031;GBDK01143126;XM_013519273 XP_013374727 MODEL 8769910 ncrna LOC102022357 uncharacterized LOC102022357 NW_004955455 9450420 9454003 - 102022357 AGCD01045922;GBDF01053970;XR_262850 MODEL 730469163 snorna SNORA36 Small nucleolar RNA SNORA36 family 8767165 protein-coding LOC102019480 myosin-7 NW_004955409 36905845 36928140 + 102019480 AGCD01010483;AGCD01010484;GBCB01040294;XM_005377179 XP_005377236 MODEL 8887105 protein-coding LOC102012060 cytochrome c oxidase subunit 6A1, mitochondrial ASSOCIATED WITH Charcot-Marie-Tooth disease recessive intermediate D (ortholog); colon adenocarcinoma (ortholog); neuropathy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955455 11201031 11203644 - 102012060 AGCD01045986;GBCQ01009037;XM_005396510 XP_005396567 MODEL 8957254 protein-coding LOC102011226 olfactory receptor 10AG1-like NW_004955511 918179 920370 - 102011226 AGCD01066346;XM_005408217 XP_005408274 MODEL 8941506 protein-coding Primpol primase and DNA directed polymerase ENCODES a protein that exhibits chromatin binding (ortholog); DNA polymerase activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN error-prone translesion synthesis (ortholog); mitochondrial DNA repair (ortholog); mitochondrial DNA replication (ortholog); ASSOCIATED WITH Myopia 22, Autosomal Dominant (ortholog); FOUND IN chromosome (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955403 24278727 24307312 - 102004998 AGCD01002271;GBDF01017298;XM_005373485;XM_013513029;XM_013513031;XM_013513040;XM_013513046 XP_005373542;XP_013368483;XP_013368485;XP_013368494;XP_013368500 MODEL 8741885 protein-coding Snx19 sorting nexin 19 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN chondrocyte differentiation (ortholog); dense core granule maturation (ortholog); insulin secretion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog); early endosome membrane (ortholog) NW_004955412 31747519 31791022 - 102024441 AGCD01013343;AGCD01013344;AGCD01013345;GBDK01128502;XM_005378570;XM_005378571;XM_005378572;XM_013511227 XP_005378627;XP_005378628;XP_005378629;XP_013366681 MODEL 39131923 snrna U1 U1 spliceosomal RNA 8874235 trna Trnaa-cgc transfer RNA alanine (anticodon CGC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955419;NW_004955449 326792;20242611;16876672 326863;20242682;16876743 -;-;- 101978817 AGCD01020232;AGCD01042230;AGCD01057606 MODEL 8848533 protein-coding Sec61g SEC61 translocon subunit gamma ENCODES a protein that exhibits phospholipid binding (ortholog); ribosome binding (ortholog); transmembrane protein transporter activity (ortholog); INVOLVED IN membrane docking (ortholog); protein targeting to ER (ortholog); SRP-dependent cotranslational protein targeting to membrane, translocation (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog); Sec61 translocon complex (ortholog) NW_004955456 645607 651764 + 102022883 AGCD01046211;AGCD01046212;GBDF01002701;XM_005396594 XP_005396651 MODEL 9047452 ncrna LOC102010853 uncharacterized LOC102010853 NW_004955403 10441158 10452838 + 102010853 AGCD01001921;XR_259168 MODEL 730469079 snorna SNORA8 Small nucleolar RNA SNORA8 8855409 protein-coding Wdpcp WD repeat containing planar cell polarity effector ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); INVOLVED IN auditory receptor cell morphogenesis (ortholog); camera-type eye development (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 15 (ortholog); FOUND IN axonemal basal plate (ortholog) NW_004955424 20723592 21114801 + 102012774 AGCD01024871;AGCD01024872;AGCD01024873;AGCD01024874;AGCD01024875;AGCD01024876;AGCD01024877;AGCD01024878;AGCD01024879;AGCD01024880;AGCD01024881;AGCD01024882;AGCD01024883;AGCD01024884;AGCD01024885;AGCD01024886;AGCD01024887;AGCD01024888;AGCD01024889;AGCD01024890;AGCD01024891;AGCD01024892;AGCD01024893;GBDF01160193;XM_005385716;XM_005385718;XM_005385719;XM_005385720;XM_013514679;XM_013514680;XM_013514681;XM_013514682;XM_013514683;XM_013514684;XM_013514685;XM_013514686 XP_005385773;XP_005385775;XP_005385776;XP_005385777;XP_013370133;XP_013370134;XP_013370135;XP_013370136;XP_013370137;XP_013370138;XP_013370139;XP_013370140 MODEL 8889839 ncrna LOC102013265 uncharacterized LOC102013265 NW_004955411 20689282 20717825 - 102013265 AGCD01012060;AGCD01012061;GBDF01278033;XR_001232800;XR_001232801;XR_001232802;XR_259939 MODEL 9012823 protein-coding Plekhg2 pleckstrin homology and RhoGEF domain containing G2 INVOLVED IN regulation of actin filament polymerization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955468 138262 149480 - 102022068 AGCD01051683;AGCD01051684;GBBH01065682;XM_013522376 XP_013377830 MODEL 39133246 snrna U4 U4 spliceosomal RNA 8741994 protein-coding Traf3 TNF receptor associated factor 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); positive regulation of type I interferon production (ortholog); regulation of cytokine production (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955538 1954152 2013367 + 102004116 AGCD01071093;GBBH01188734;XM_005410757;XM_005410759;XM_005410760;XM_005410761;XM_005410762;XM_013507875;XM_013507877 XP_005410814;XP_005410816;XP_005410817;XP_005410818;XP_005410819;XP_013363329;XP_013363331 MODEL 9021151 ncrna LOC102004848 uncharacterized LOC102004848 NW_004955435 5016629 5017589 - 102004848 AGCD01032870;GBDF01300438;XR_261661 MODEL 8928785 protein-coding Ephb1 EPH receptor B1 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); protein tyrosine kinase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN angiogenesis (ortholog); axon guidance (ortholog); camera-type eye morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH aortic dissection (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); early endosome membrane (ortholog) NW_004955501 3424112 3821727 - 102020266 AGCD01064105;AGCD01064106;GBDF01113237;XM_005406784 XP_005406841 MODEL 8900587 protein-coding LOC102008531 BRCA1-A complex subunit RAP80-like NW_004955417 1529837 1666641 - 102008531 AGCD01017837;AGCD01017838;AGCD01017839;AGCD01017840;AGCD01017841;AGCD01017842;AGCD01017843;AGCD01017844;XM_013512696 XP_013368150 MODEL 8976471 protein-coding Ppm1k protein phosphatase, Mg2+/Mn2+ dependent 1K ENCODES a protein that exhibits [3-methyl-2-oxobutanoate dehydrogenase (lipoamide)]-phosphatase activity (ortholog); manganese ion binding (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); positive regulation of amino acid metabolic process (ortholog); regulation of mitochondrial membrane permeability involved in apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); congestive heart failure (ortholog); maple syrup urine disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955474 12229658 12250783 + 102024898 AGCD01054653;GBDI01006145;XM_013502772;XM_013502774 XP_013358226;XP_013358228 MODEL 8734391 protein-coding LOC102016314 toll-like receptor 11 NW_004955550 671037 682972 + 102016314 AGCD01072515;GBDF01223394;XM_005412035 XP_005412092 MODEL 9016048 pseudo LOC102010073 nef-associated protein 1 pseudogene NW_004955503 3250978 3252092 - 102010073 AGCD01064620 MODEL 8747799 protein-coding Spatc1 spermatogenesis and centriole associated 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); ASSOCIATED WITH stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) NW_004955454 2675857 2703729 + 102020200 AGCD01045028;AGCD01045029;GBDF01001260;XM_005395837 XP_005395894 MODEL 8728678 protein-coding Ran RAN, member RAS oncogene family ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); G protein activity (ortholog); GDP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to mineralocorticoid stimulus (ortholog); GTP metabolic process (ortholog); PARTICIPATES IN CRM1 export pathway; microRNA pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN centriole (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955482 1222944 1223891 - 102029862 AGCD01057206;GBCQ01009220;GBDF01002060;XM_005402988 XP_005403045 MODEL 8915981 protein-coding Rp2 RP2 activator of ARL3 GTPase ENCODES a protein that exhibits GTPase activator activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN post-chaperonin tubulin folding pathway (ortholog); post-Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Eye Abnormalities (ortholog); fundus dystrophy (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955516 1160148 1193540 - 102008023 AGCD01067413;GBCC01018717;XM_005409001 XP_005409058 MODEL 8939243 protein-coding Rbp4 retinol binding protein 4 ENCODES a protein that exhibits molecular carrier activity (ortholog); protein-containing complex binding (ortholog); retinol binding (ortholog); INVOLVED IN cardiac muscle tissue development (ortholog); detection of light stimulus involved in visual perception (ortholog); embryonic organ morphogenesis (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute pyelonephritis (ortholog); alcohol-associated liver disease (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955507 112342 120050 - 102029207 AGCD01065462;AGCD01065463;GBBH01117602;GBCE01001890;XM_013506237 XP_013361691 MODEL 9010888 protein-coding LOC102008168 vomeronasal type-1 receptor 2-like NW_004955603 429287 430189 - 102008168 AGCD01076845;XM_005414839 XP_005414896 MODEL 9028597 pseudo LOC102003054 importin subunit alpha-1 pseudogene NW_004955519 4042312 4044048 + 102003054 AGCD01067975 MODEL 9002802 protein-coding Slc35a4 solute carrier family 35 member A4 INVOLVED IN positive regulation of cellular respiration (ortholog); positive regulation of translation in response to stress (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); mitochondrial inner membrane (ortholog) NW_004955418 114916 116878 - 102030308 AGCD01018668;GBDK01127414;XM_005382020 XP_005382077 MODEL 9027750 pseudo LOC102011675 BTB/POZ domain-containing protein KCTD3 pseudogene NW_004955422 13339184 13342304 + 102011675 AGCD01022821 MODEL 8883673 protein-coding Rragd Ras related GTP binding D ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to L-leucine (ortholog); cellular response to leucine starvation (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); Gtr1-Gtr2 GTPase complex (ortholog); lysosomal membrane (ortholog) NW_004955411 16111931 16155662 - 102006554 AGCD01011966;AGCD01011967;GBDJ01225532;XM_013510716 XP_013366170 MODEL 8958426 protein-coding Phc2 polyhomeotic homolog 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN spermatogenesis (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN heterochromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 11490336 11538618 - 102008054 AGCD01044337;AGCD01044338;AGCD01044339;GBCQ01006896;XM_013519534;XM_013519535 XP_013374988;XP_013374989 MODEL 8898484 protein-coding Rnaseh2a ribonuclease H2 subunit A ENCODES a protein that exhibits RNA-DNA hybrid ribonuclease activity (ortholog); INVOLVED IN mismatch repair (ortholog); RNA catabolic process (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 4 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); ribonuclease H2 complex (ortholog) NW_004955415 31884533 31894159 + 102022280 AGCD01016700;GBCE01123368;XM_005381029;XM_005381030;XM_005381031 XP_005381086;XP_005381087;XP_005381088 MODEL 8890141 protein-coding Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ENCODES a protein that exhibits [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity (ortholog); AMP-activated protein kinase activity (ortholog); ATP binding (ortholog); INVOLVED IN CAMKK-AMPK signaling cascade (ortholog); cellular response to calcium ion (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); amenorrhea (ortholog); breast cancer (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); chromatin (ortholog) NW_004955426 25079718 25102090 - 102025600 AGCD01026701;GBDK01358699;XM_005386244 XP_005386301 MODEL 8788001 protein-coding Pthlh parathyroid hormone like hormone ENCODES a protein that exhibits hormone activity (ortholog); peptide hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); bone mineralization (ortholog); endochondral ossification (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH achondroplasia (ortholog); acute necrotizing pancreatitis (ortholog); alcoholic pancreatitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955505 6834533 6846909 + 102018623 AGCD01065187;GBBH01206343;GBDK01026033;XM_005407152 XP_005407209 MODEL 8712499 ncrna LOC102005902 uncharacterized LOC102005902 NW_004955409 9536684 9555161 + 102005902 AGCD01009443;AGCD01009444;GBDF01156061;XR_259761 MODEL 730469144 snorna SNORA8 Small nucleolar RNA SNORA8 8791025 pseudo LOC102005525 protein kinase C iota type pseudogene NW_004955445 18126528 18128715 + 102005525 AGCD01039898 MODEL 730469004 snorna SNORA51 Small nucleolar RNA SNORA51 8734614 protein-coding Ptk2 protein tyrosine kinase 2 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel development (ortholog); cell migration (ortholog); PARTICIPATES IN integrin mediated signaling pathway; long term potentiation; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); ciliary basal body (ortholog) NW_004955461 14337914 14622779 - 102025551 AGCD01049055;AGCD01049056;GBBH01185452;GBCB01040518;XM_005398062;XM_005398063;XM_013521315;XM_013521316;XM_013521317;XM_013521318;XM_013521319;XM_013521320;XM_013521321;XM_013521322;XM_013521323 XP_005398119;XP_005398120;XP_013376769;XP_013376770;XP_013376771;XP_013376772;XP_013376773;XP_013376774;XP_013376775;XP_013376776;XP_013376777 MODEL 9040250 ncrna LOC102008904 uncharacterized LOC102008904 NW_004955580 1286792 1287412 - 102008904 AGCD01075652;GBDK01422065;XR_265090 MODEL 10108931 ncrna LOC106150339 uncharacterized LOC106150339 NW_004955472 7277848 7298260 + 106150339 AGCD01053618;GBDF01145537;XR_001237096 MODEL 8972169 protein-coding LOC102004087 zinc finger protein 709-like NW_004955497 2376 35406 + 102004087 AGCD01062397;AGCD01062398;GBDF01011194;XM_013505442;XM_013505444 XP_013360896;XP_013360898 MODEL 8906577 protein-coding Sf3b4 splicing factor 3b subunit 4 ENCODES a protein that exhibits splicing factor binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); cleft palate (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleus (ortholog); precatalytic spliceosome (ortholog); spliceosomal complex (ortholog) NW_004955413 826190 830502 + 102021955 AGCD01013491;GBDF01082584;XM_005378708 XP_005378765 MODEL 8766970 protein-coding Srek1 splicing regulatory glutamic acid and lysine rich protein 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955446 2908587 2946966 - 102014094 AGCD01039993;GBBH01089792;XM_005392605;XM_005392608;XM_005392611;XM_013518443 XP_005392662;XP_005392665;XP_005392668;XP_013373897 MODEL 8701279 protein-coding Sec62 SEC62 homolog, preprotein translocation factor INVOLVED IN post-translational protein targeting to endoplasmic reticulum membrane (ortholog); post-translational protein targeting to membrane, translocation (ortholog); reticulophagy (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955420 219909 247471 + 102015850 AGCD01020538;AGCD01020539;GBDI01002283;XM_005382962 XP_005383019 MODEL 8820965 protein-coding LOC102006233 olfactory receptor 10J4-like NW_004955468 11106424 11107365 - 102006233 AGCD01052114;XM_005400170 XP_005400227 MODEL 9005007 ncrna LOC102019838 uncharacterized LOC102019838 NW_004955434 18189850 18227807 + 102019838 AGCD01032555;AGCD01032556;AGCD01032557;AGCD01032558;GBDF01253666;XR_001234759;XR_001234760;XR_001234761;XR_261631;XR_261632 MODEL 9044015 protein-coding Rgs13 regulator of G protein signaling 13 INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); negative regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung cancer (ortholog); sarcoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955406 30111770 30134605 + 102017840 AGCD01006358;AGCD01006359;GBDI01160957;XM_005375099;XM_005375100;XM_013521830 XP_005375156;XP_005375157;XP_013377284 MODEL 8785572 protein-coding LOC102004852 trace amine-associated receptor 7a-like NW_004955436 13109272 13110333 - 102004852 AGCD01033854;XM_005389306 XP_005389363 MODEL 8702555 protein-coding Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 ENCODES a protein that exhibits [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity (ortholog); AMP-activated protein kinase activity (ortholog); ATP binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); cellular response to calcium ion (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Cardiac Fibrosis (ortholog); Cardiomegaly (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); cytoplasm (ortholog) NW_004955464 2996608 3062197 - 102021219 AGCD01049967;AGCD01049968;AGCD01049969;GBCB01001848;XM_005398501;XM_013521596 XP_005398558;XP_013377050 MODEL 9040258 pseudo LOC102010074 mortality factor 4-like protein 1 pseudogene NW_004955427 22903386 22904350 - 102010074 AGCD01027478 MODEL 9024737 protein-coding LOC102008533 cytochrome c oxidase subunit 7C, mitochondrial ASSOCIATED WITH Alzheimer's disease (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955418 24413883 24416530 - 102008533 AGCD01019331;GBCE01002366;XM_005382301 XP_005382358 MODEL 8763580 protein-coding Bud31 BUD31 spliceosome associated protein ENCODES a protein that exhibits nuclear receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955460 15083472 15092217 + 102009584 AGCD01048768;GBDF01047466;XM_005397944;XM_005397945 XP_005398001;XP_005398002 MODEL 8824114 protein-coding LOC102012063 NEDD4-binding protein 2-like 2 NW_004955407 28220425 28222169 + 102012063 AGCD01007577;XM_013505975 XP_013361429 MODEL 9030647 protein-coding Prss41 serine protease 41 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955442 14527717 14532265 - 102016754 AGCD01037824;XM_005391405 XP_005391462 MODEL 39131924 snrna U1 U1 spliceosomal RNA 9044007 protein-coding Spatc1l spermatogenesis and centriole associated 1 like ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); positive regulation of cAMP/PKA signal transduction (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); sperm head-tail coupling apparatus (ortholog) NW_004955407 42621167 42629350 - 102017632 AGCD01007894;GBDF01009206;XM_005375929 XP_005375986 MODEL 10256815 ncrna LOC106147443 uncharacterized LOC106147443 NW_004955408 14496344 14524772 + 106147443 AGCD01008399;XR_001232349 MODEL 8890267 pseudo LOC102003061 protein tilB homolog NW_004955435 18116016 18118858 - 102003061 AGCD01033389 MODEL 730469157 snorna SNORA17 Small nucleolar RNA SNORA17 8722502 pseudo LOC102007365 double-stranded RNA-binding protein Staufen homolog 1 pseudogene NW_004955530 1457860 1459504 - 102007365 AGCD01069884;XR_264702 MODEL 8802036 protein-coding Snx2 sorting nexin 2 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN lamellipodium morphogenesis (ortholog); retrograde transport, endosome to Golgi (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); endosome membrane (ortholog) NW_004955521 870469 934112 + 102009868 AGCD01068154;AGCD01068155;AGCD01068156;AGCD01068157;AGCD01068158;AGCD01068159;AGCD01068160;AGCD01068161;GBCE01029530;XM_005409303 XP_005409360 MODEL 8753322 trna Trnaa-ggc transfer RNA alanine (anticodon GGC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955403;NW_004955407;NW_004955423;NW_004955421;NW_004955454 2513557;3403311;23453225;6344906;5926569 2513628;3403382;23453296;6344977;5926641 +;+;+;+;- 101978815 AGCD01001737;AGCD01006858;AGCD01021736;AGCD01024005;AGCD01045196 MODEL 8951694 protein-coding Pold2 DNA polymerase delta 2, accessory subunit ENCODES a protein that exhibits DNA polymerase binding (ortholog); enzyme activator activity (ortholog); INVOLVED IN DNA biosynthetic process (ortholog); DNA replication (ortholog); DNA-templated DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN delta DNA polymerase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955456 7853476 7860108 + 102021629 AGCD01046435;GBDF01080182;XM_005396671;XM_013520626 XP_005396728;XP_013376080 MODEL 8739493 protein-coding Rbp5 retinol binding protein 5 ASSOCIATED WITH colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955413 4682477 4689949 - 102012622 AGCD01013624;GBDF01211758;XM_005378859 XP_005378916 MODEL 8832479 protein-coding LOC102018270 uncharacterized LOC102018270 NW_004955465 3342697 3344495 + 102018270 AGCD01050375;GBDF01176710;XM_005398979 XP_005399036 MODEL 8829883 pseudo LOC102011682 rho guanine nucleotide exchange factor 38-like NW_004955502 656842 673369 - 102011682 AGCD01064247 MODEL 8922344 ncrna LOC102022361 uncharacterized LOC102022361 NW_004955456 16058739 16062110 - 102022361 AGCD01046686;GBCQ01059827;XR_262914 MODEL 8781350 protein-coding Rras RAS related ENCODES a protein that exhibits GDP binding (ortholog); GTPase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN face morphogenesis (ortholog); leukocyte differentiation (ortholog); negative regulation of cell migration (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH COVID-19 (ortholog); esophageal cancer (ortholog); juvenile myelomonocytic leukemia (ortholog) NW_004955559 1244658 1248774 + 102011367 AGCD01073638;GBDF01188765;XM_005412862 XP_005412919 MODEL 8794718 protein-coding Wdr1 WD repeat domain 1 ENCODES a protein that exhibits actin filament binding (ortholog); actin severing activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); apical junction assembly (ortholog); cortical cytoskeleton organization (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal dominant intellectual developmental disorder 61 (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); anchoring junction (ortholog); cell junction (ortholog) NW_004955549 2640193 2674818 + 102012586 AGCD01072480;GBCQ01034784;GBDJ01009712;XM_013508539 XP_013363993 MODEL 8883652 protein-coding Traf3ip2 TRAF3 interacting protein 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN B cell affinity maturation (ortholog); B cell apoptotic process (ortholog); B cell homeostasis (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Candidiasis, Familial, 8 (ortholog); psoriasis (ortholog); FOUND IN cytoplasmic vesicle (ortholog); nucleus (ortholog) NW_004955411 36328152 36363614 - 102003742 AGCD01012471;AGCD01012472;GBDK01225046;XM_005377909;XM_013510877 XP_005377966;XP_013366331 MODEL 39133249 snrna U4 U4 spliceosomal RNA 9038899 protein-coding Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); 1-phosphatidylinositol-5-phosphate 4-kinase activity (ortholog); identical protein binding (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); positive regulation of autophagosome assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN autophagosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955458 5315083 5327617 + 102007087 AGCD01047474;AGCD01047475;AGCD01047476;GBDI01062171;GBDK01128471;XM_005397400 XP_005397457 MODEL 8986517 ncrna LOC102019483 uncharacterized LOC102019483 NW_004955411 12939284 12945654 - 102019483 AGCD01011861;GBDF01122716;XR_259935 MODEL 8935168 protein-coding LOC102005904 uncharacterized LOC102005904 NW_004955409 26016614 26049251 + 102005904 AGCD01010148;AGCD01010149;AGCD01010150;GBDF01305671;XM_005376937 XP_005376994 MODEL 8815608 protein-coding Ppm1l protein phosphatase, Mg2+/Mn2+ dependent 1L ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); MAPK cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); obesity (ortholog) NW_004955448 11265988 11548258 + 102006184 AGCD01041520;AGCD01041521;AGCD01041522;AGCD01041523;AGCD01041524;AGCD01041525;AGCD01041526;AGCD01041527;GBCE01057334;GBCE01057335;XM_005393125 XP_005393182 MODEL 9064412 ncrna LOC102011229 uncharacterized LOC102011229 NW_004955515 241 57618 - 102011229 AGCD01067170;AGCD01067171;AGCD01067172;AGCD01067173;AGCD01067174;AGCD01067175;AGCD01067176;AGCD01067177;AGCD01067178;AGCD01067179;AGCD01067180;AGCD01067181;GBCE01018606;XR_264517 MODEL 8813165 protein-coding Ranbp1 RAN binding protein 1 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); INVOLVED IN cellular response to leptomycin B (ortholog); cellular response to xenobiotic stimulus (ortholog); positive regulation of mitotic centrosome separation (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); dilated cardiomyopathy (ortholog); FOUND IN axon cytoplasm (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955442 17985456 17992945 - 102024288 AGCD01037991;GBDF01008685;XM_005391735;XM_005391736 XP_005391792;XP_005391793 MODEL 8990784 pseudo LOC102008909 lupus La protein homolog pseudogene NW_004955402 62999061 63000015 - 102008909 AGCD01001651 MODEL 9043865 ncrna LOC102013267 uncharacterized LOC102013267 NW_004955464 13689362 13696059 + 102013267 AGCD01050291;GBCQ01087996;XR_001236689;XR_263217 MODEL 8981562 ncrna LOC102004088 uncharacterized LOC102004088 NW_004955425 20438853 20450026 + 102004088 AGCD01025731;GBCB01044195;XR_001234293 MODEL 8888219 protein-coding Phc3 polyhomeotic homolog 3 PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); PcG protein complex (ortholog) NW_004955420 329215 403191 - 102016814 AGCD01020540;AGCD01020541;AGCD01020542;GBDI01054007;XM_005382964;XM_005382969;XM_013513437;XM_013513438;XM_013513439 XP_005383021;XP_005383026;XP_013368891;XP_013368892;XP_013368893 MODEL 626189198 snorna SNORA36 Small nucleolar RNA SNORA36 family 9067949 protein-coding LOC102003062 vomeronasal type-2 receptor 116-like NW_004955532 118728 136794 + 102003062 AGCD01070099;AGCD01070100;XM_013507568 XP_013363022 MODEL 8940567 protein-coding Slc35a5 solute carrier family 35 member A5 ENCODES a protein that exhibits pyrimidine nucleotide-sugar transmembrane transporter activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955427 12906650 12940419 + 102026997 AGCD01027230;GBDF01126546;XM_005386388;XM_005386389;XM_013515192;XR_261261;XR_261262;XR_261263;XR_261265;XR_261266 XP_005386445;XP_005386446;XP_013370646 MODEL 8792252 protein-coding Rnaseh2b ribonuclease H2 subunit B INVOLVED IN in utero embryonic development (ortholog); negative regulation of gene expression (ortholog); positive regulation of fibroblast proliferation (ortholog); ASSOCIATED WITH Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 1 (ortholog); Aicardi-Goutieres Syndrome 2 (ortholog); FOUND IN nucleoplasm (ortholog); ribonuclease H2 complex (ortholog) NW_004955431 4291687 4368169 + 102029546 AGCD01029993;AGCD01029994;AGCD01029995;AGCD01029996;GBDF01160649;XM_013515851;XM_013515852;XM_013515853;XM_013515854;XM_013515855;XM_013515856;XM_013515857 XP_013371305;XP_013371306;XP_013371307;XP_013371308;XP_013371309;XP_013371310;XP_013371311 MODEL 8718652 pseudo LOC102016316 isocitrate dehydrogenase [NADP] cytoplasmic-like NW_004955442 13154777 13160551 - 102016316 AGCD01037762;AGCD01037763 MODEL 730469166 snorna SNORA8 Small nucleolar RNA SNORA8 8780748 protein-coding Ephb2 EPH receptor B2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); axon guidance receptor activity (ortholog); ephrin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Anorectal Malformations (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); dendrite (ortholog) NW_004955452 2844713 2986790 + 102010660 AGCD01043905;AGCD01043906;AGCD01043907;GBBH01093218;XM_005394747;XM_005394748;XM_013519671 XP_005394804;XP_005394805;XP_013375125 MODEL 8830886 pseudo LOC102022364 1,5-anhydro-D-fructose reductase pseudogene NW_004955408 16942735 16943660 - 102022364 AGCD01008449 MODEL 8826537 pseudo LOC102008170 40S ribosomal protein S18-like NW_004955617 165313 165780 + 102008170 AGCD01077271 MODEL 8852351 protein-coding LOC102005530 arylacetamide deacetylase-like NW_004955448 2938773 2958946 + 102005530 AGCD01041296;AGCD01041297;AGCD01041298;AGCD01041299;GBCQ01129513;XM_005393035 XP_005393092 MODEL 8737909 protein-coding LOC102004854 cytochrome b561 domain-containing protein 2 NW_004955532 2140745 2155258 + 102004854 AGCD01070220;GBCQ01070938;XM_005410273;XM_013507592;XM_013507593;XM_013507594;XM_013507595 XP_005410330;XP_013363046;XP_013363047;XP_013363048;XP_013363049 MODEL 730469193 snorna SNORA8 Small nucleolar RNA SNORA8 8788127 protein-coding Plekhg3 pleckstrin homology and RhoGEF domain containing G3 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN regulation of cell migration (ortholog); regulation of establishment of cell polarity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955466 5172603 5212518 - 102026957 AGCD01050868;AGCD01050869;GBBH01091213;XM_013521957;XM_013521958;XM_013521959;XM_013521960;XM_013521961;XM_013521963;XM_013521964 XP_013377411;XP_013377412;XP_013377413;XP_013377414;XP_013377415;XP_013377417;XP_013377418 MODEL 10122181 ncrna LOC106150340 uncharacterized LOC106150340 NW_004955472 1973576 1976345 - 106150340 AGCD01053425;GBDF01118125;XR_001237097 MODEL 9056274 pseudo LOC102007368 proline-rich nuclear receptor coactivator 1 pseudogene NW_004955437 795083 811162 - 102007368 AGCD01034163;AGCD01034164;AGCD01034165;AGCD01034166 MODEL 8909408 trna Trnaa-ugc transfer RNA alanine (anticodon UGC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978816 AGCD01006174;AGCD01008468;AGCD01026910;AGCD01041021;AGCD01044158;AGCD01045001;AGCD01050627;AGCD01050630;AGCD01051583;AGCD01057078;AGCD01057309;AGCD01064062;AGCD01069830 MODEL 8777407 protein-coding Sf3b5 splicing factor 3b subunit 5 ENCODES a protein that exhibits RNA binding (ortholog); splicing factor binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); precatalytic spliceosome (ortholog) NW_004955436 16380412 16381373 + 102004851 AGCD01033915;GBBH01031902;XM_005389240 XP_005389297 MODEL 8709091 protein-coding LOC102006234 apolipoprotein L2-like NW_004955413 22477358 22499340 - 102006234 AGCD01014302;GBDK01079420;XM_005379648 XP_005379705 MODEL 8944536 protein-coding Sec63 SEC63 homolog, protein translocation regulator INVOLVED IN liver development (ortholog); post-translational protein targeting to endoplasmic reticulum membrane (ortholog); post-translational protein targeting to membrane, translocation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955411 33063056 33126325 - 102010137 AGCD01012343;AGCD01012344;GBDF01083376;XM_005377841 XP_005377898 MODEL 8710709 protein-coding LOC102019841 melanoma-associated antigen B3-like NW_004955531 802330 814697 - 102019841 AGCD01070013;GBDF01304372;XM_005410137;XM_005410138;XM_013507560 XP_005410194;XP_005410195;XP_013363014 MODEL 8948743 protein-coding Rpa1 replication protein A1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin-protein adaptor activity (ortholog); damaged DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); chromosome organization (ortholog); DNA damage response (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN condensed chromosome (ortholog); condensed nuclear chromosome (ortholog); DNA replication factor A complex (ortholog) NW_004955481 1304035 1361806 - 102014137 AGCD01056830;GBCB01021026;XM_005402602 XP_005402659 MODEL 8841742 protein-coding Rgs14 regulator of G protein signaling 14 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GDP-dissociation inhibitor activity (ortholog); GTPase activating protein binding (ortholog); INVOLVED IN cell division (ortholog); chromosome segregation (ortholog); learning (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955408 29602654 29616793 + 102024093 AGCD01008765;GBDI01222250;XM_005376427 XP_005376484 MODEL 730469055 snorna SNORA51 Small nucleolar RNA SNORA51 8970209 pseudo LOC102010080 protein MEMO1-like NW_004955429 4415409 4416220 + 102010080 AGCD01028489 MODEL 9011044 protein-coding LOC102010856 uncharacterized LOC102010856 NW_004955650 98638 101158 + 102010856 AGCD01077799;GBDJ01149179;XM_005415052;XR_001232591 XP_005415109 MODEL 9057895 pseudo LOC102008535 plasma membrane calcium-transporting ATPase 1-like NW_004955483 8088963 8090785 + 102008535 AGCD01057826 MODEL 8981518 protein-coding Ptk2b protein tyrosine kinase 2 beta ENCODES a protein that exhibits 3-phosphoinositide-dependent protein kinase binding (ortholog); calcium/calmodulin-dependent protein kinase activity (ortholog); enzyme binding (ortholog); INVOLVED IN actin filament organization (ortholog); activation of GTPase activity (ortholog); activation of Janus kinase activity (ortholog); PARTICIPATES IN endothelin signaling pathway; fibroblast growth factor signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); cell body (ortholog) NW_004955403 49856056 49970800 + 102003931 AGCD01002951;AGCD01002952;AGCD01002953;GBCE01000568;XM_005373738;XM_005373739;XM_005373740;XM_005373741;XM_013514189;XM_013514191 XP_005373795;XP_005373796;XP_005373797;XP_005373798;XP_013369643;XP_013369645 MODEL 8941664 protein-coding Prkab1 protein kinase AMP-activated non-catalytic subunit beta 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); nail development (ortholog); positive regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH anuria (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleotide-activated protein kinase complex (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955455 11877407 11889987 - 102016235 AGCD01046021;GBCB01038378;XM_005396524;XM_005396525 XP_005396581;XP_005396582 MODEL 9022207 protein-coding Bysl bystin like INVOLVED IN blastocyst formation (ortholog); cell population proliferation (ortholog); cellular response to forskolin (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Brain Injuries (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN apical part of cell (ortholog); cell projection (ortholog); chromosome (ortholog) NW_004955437 8257081 8266627 + 102019200 AGCD01034483;GBDF01090288;XM_005389708 XP_005389765 MODEL 39131925 snrna U1 U1 spliceosomal RNA 8763200 protein-coding Spats1 spermatogenesis associated serine rich 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955437 9952360 9984392 + 102024050 AGCD01034552;AGCD01034553;AGCD01034554;AGCD01034555;GBDF01084545;XM_005389820;XM_013517014;XM_013517015 XP_005389877;XP_013372468;XP_013372469 MODEL 8987107 protein-coding Snx20 sorting nexin 20 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN early endosome membrane (ortholog) NW_004955433 8725950 8734699 - 102016508 AGCD01031602;GBDJ01170428;XM_005388271 XP_005388328 MODEL 8897770 protein-coding Rbpj recombination signal binding protein for immunoglobulin kappa J region ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); aortic valve development (ortholog); arterial endothelial cell fate commitment (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH Adams-Oliver syndrome (ortholog); Adams-Oliver syndrome 3 (ortholog); aortic valve disease (ortholog); FOUND IN CSL-Notch-Mastermind transcription factor complex (ortholog); cytoplasm (ortholog); MAML1-RBP-Jkappa- ICN1 complex (ortholog) NW_004955443 18783061 19029441 - 102017716 AGCD01038610;AGCD01038611;AGCD01038612;AGCD01038613;AGCD01038614;AGCD01038615;AGCD01038616;GBCQ01095808;XM_005392029;XM_005392030;XM_013518082;XM_013518083;XM_013518084;XM_013518085 XP_005392086;XP_005392087;XP_013373536;XP_013373537;XP_013373538;XP_013373539 MODEL 8934202 protein-coding Wdr11 WD repeat domain 11 INVOLVED IN cilium assembly (ortholog); head development (ortholog); heart development (ortholog); ASSOCIATED WITH amenorrhea (ortholog); Autosomal Recessive Intellectual Developmental Disorder 78 (ortholog); CHARGE syndrome (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955551 1733079 1788354 + 102015571 AGCD01072698;AGCD01072699;GBDF01220834;XM_005412176 XP_005412233 MODEL 9042858 ncrna LOC102003065 uncharacterized LOC102003065 NW_004955437 17589746 17591956 + 102003065 AGCD01034751;GBDF01287696;XR_261886 MODEL 405822144 snorna SNORD56 Small nucleolar RNA SNORD56 39133251 snrna U4 U4 spliceosomal RNA 8791097 pseudo LOC102011231 heterogeneous nuclear ribonucleoprotein F-like NW_004955516 4862856 4863984 - 102011231 AGCD01067538 MODEL 8965215 ncrna LOC102005907 uncharacterized LOC102005907 NW_004955410 11624781 11626736 - 102005907 AGCD01010829;GBDF01087824;XR_259837 MODEL 8754230 protein-coding LOC102016318 myeloid cell surface antigen CD33-like NW_004955558 1147710 1153953 - 102016318 AGCD01073420;GBBH01177427;XM_005412696 XP_005412753 MODEL 8714588 protein-coding Timm21 translocase of inner mitochondrial membrane 21 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); protein import into mitochondrial matrix (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog); TIM23 mitochondrial import inner membrane translocase complex (ortholog) NW_004955402 57586651 57598817 + 102009241 AGCD01001501;GBDF01305105;XM_005373066;XR_259107;XR_259108 XP_005373123 MODEL 8956076 protein-coding Ranbp10 RAN binding protein 10 ENCODES a protein that exhibits beta-tubulin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); microtubule cytoskeleton (ortholog); nucleus (ortholog) NW_004955484 8889349 8960122 + 102023702 AGCD01058400;AGCD01058401;GBDF01123418;XM_005403623 XP_005403680 MODEL 10182838 ncrna LOC106147444 uncharacterized LOC106147444 NW_004955408 14328702 14354971 - 106147444 AGCD01008393;XR_001232351;XR_001232352 MODEL 730469190 snorna SNORA17 Small nucleolar RNA SNORA17 8982520 protein-coding Ephb3 EPH receptor B3 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); ephrin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955420 22900588 22919924 - 102016275 AGCD01021213;AGCD01021214;GBDI01185928;GBDJ01230601;XM_013513587 XP_013369041 MODEL 8729091 pseudo LOC102018271 60S ribosomal protein L9-like NW_004955412 17709908 17710500 + 102018271 AGCD01012916 MODEL 8980648 protein-coding Pold3 DNA polymerase delta 3, accessory subunit ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN DNA biosynthetic process (ortholog); DNA-templated DNA replication (ortholog); error-prone translesion synthesis (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Colorectal Neoplasms (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); delta DNA polymerase complex (ortholog); nucleoplasm (ortholog) NW_004955414 17064379 17111946 - 102006120 AGCD01015233;AGCD01015234;GBDF01128109;XM_005379914;XM_005379915 XP_005379971;XP_005379972 MODEL 8756274 ncrna LOC102013274 uncharacterized LOC102013274 NW_004955413 15656502 15680187 + 102013274 AGCD01014081;AGCD01014082;AGCD01014083;AGCD01014084;GBDI01191119;XR_001232941;XR_260081 MODEL 8857547 pseudo LOC102008915 R-spondin-3 pseudogene NW_004955406 6122483 6124674 - 102008915 AGCD01005744 MODEL 8702598 protein-coding Srek1ip1 SREK1 interacting protein 1 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955446 4230559 4267331 + 102021718 AGCD01040034;GBDF01047867;XM_005392633 XP_005392690 MODEL 8821237 protein-coding LOC102011688 uncharacterized LOC102011688 NW_004955429 5818013 5828157 + 102011688 AGCD01028537;XM_013515350 XP_013370804 MODEL 730469317 snorna SNORA38 Small nucleolar RNA SNORA38 8851084 protein-coding Traf3ip3 TRAF3 interacting protein 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein-macromolecule adaptor activity (ortholog); zf-TRAF domain binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to interferon-alpha (ortholog); cellular response to interferon-beta (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog); lysosomal membrane (ortholog) NW_004955489 2442319 2468683 - 102022708 AGCD01059871;GBBH01229221;XM_005404533;XM_013504476;XM_013504477;XM_013504478;XM_013504479;XM_013504480 XP_005404590;XP_013359930;XP_013359931;XP_013359932;XP_013359933;XP_013359934 MODEL 8992036 protein-coding Slc35b1 solute carrier family 35 member B1 ENCODES a protein that exhibits ATP:ADP antiporter activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955451 11870771 11877149 + 102023424 AGCD01043367;GBDF01050591;XM_005394207 XP_005394264 MODEL 8862526 pseudo LOC102019485 protein FAM136A pseudogene NW_004955411 22835359 22835809 - 102019485 AGCD01012098;XM_005377789 MODEL 8770813 protein-coding Rnaseh2c ribonuclease H2 subunit C INVOLVED IN RNA catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 3 (ortholog); FOUND IN ribonuclease H2 complex (ortholog) NW_004955422 19556129 19557416 + 102029302 AGCD01023019;GBDF01051514;XM_005384463 XP_005384520 MODEL 8801249 protein-coding Rpa2 replication protein A2 ENCODES a protein that exhibits damaged DNA binding (ortholog); DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN base-excision repair (ortholog); DNA replication (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); DNA replication factor A complex (ortholog) NW_004955452 7080641 7098009 - 102011170 AGCD01044131;GBCB01043885;XM_005394935;XM_013519742;XM_013519743 XP_005394992;XP_013375196;XP_013375197 MODEL 8873610 protein-coding LOC102008171 exonuclease 3'-5' domain-containing protein 1-like NW_004956095 1189 6900 - 102008171 AGCD01079041;AGCD01079042;AGCD01079043;GBDJ01296153;GBDK01051647;XM_005415168 XP_005415225 MODEL 8936649 protein-coding Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity (ortholog); INVOLVED IN cholesterol metabolic process (ortholog); lysosome localization (ortholog); phosphatidylinositol dephosphorylation (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN late endosome membrane (ortholog); lysosomal membrane (ortholog); phagocytic vesicle membrane (ortholog) NW_004955550 1275921 1279262 - 102025625 AGCD01072559;GBCE01055444;XM_005412063 XP_005412120 MODEL 8872871 protein-coding LOC102012064 olfactory receptor 10C1-like NW_004955458 2337356 2338318 - 102012064 AGCD01047225;XM_005397239 XP_005397296 MODEL 9028787 protein-coding LOC102010081 vomeronasal secretory protein 2-like NW_004955513 2601129 2609926 + 102010081 AGCD01066882;AGCD01066883;GBDF01023674;XM_005408421;XM_005408422;XM_013506591 XP_005408478;XP_005408479;XP_013362045 MODEL 8873619 pseudo LOC102008537 60S ribosomal protein L39 pseudogene NW_004955420 7015115 7015474 - 102008537 AGCD01020693;XM_005383030 MODEL 8913231 pseudo LOC102004858 KATNB1-like protein 1 pseudogene NW_004955439 1794420 1798798 + 102004858 AGCD01035627 MODEL 8796917 protein-coding Prkab2 protein kinase AMP-activated non-catalytic subunit beta 2 ENCODES a protein that exhibits AMP-activated protein kinase activity (ortholog); enzyme binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); positive regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cAMP-dependent protein kinase complex (ortholog); cytoplasm (ortholog) NW_004955568 1253331 1279761 + 102015995 AGCD01074543;GBDF01307774;XM_005413470 XP_005413527 MODEL 8709854 protein-coding Ptk6 protein tyrosine kinase 6 ENCODES a protein that exhibits identical protein binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN cell migration (ortholog); cellular response to retinoic acid (ortholog); intestinal epithelial cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955528 687996 695596 + 102009754 AGCD01069542;GBCQ01083858;XM_005409962 XP_005410019 MODEL 8831095 protein-coding Bzw1 basic leucine zipper and W2 domains 1 INVOLVED IN regulation of translational initiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955403 676384 688353 - 102003303 AGCD01001704;AGCD01001705;GBDF01009056;XM_005373238;XM_013511843 XP_005373295;XP_013367297 MODEL 8709056 protein-coding Pheta1 PH domain containing endocytic trafficking adaptor 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN endosome organization (ortholog); receptor recycling (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN clathrin-coated vesicle (ortholog); early endosome (ortholog); recycling endosome (ortholog) NW_004955482 8052534 8058004 - 102005711 AGCD01057499;AGCD01057500;GBBH01207880;GBCE01030281;XM_013503647 XP_013359101 MODEL 8856418 protein-coding Prss45 Putative serine protease 45 NW_004955420 25400359 25408044 + 102020808 AGCD01021357;GBDJ01287717;XM_005383425;XM_013513623 XP_005383482;XP_013369077 MODEL 9028743 ncrna LOC102007371 uncharacterized LOC102007371 NW_004955546 1333455 1336205 - 102007371 AGCD01072048;GBBH01028831;XR_264889 MODEL 10222185 ncrna LOC106150341 uncharacterized LOC106150341 NW_004955472 12842352 12849040 - 106150341 AGCD01053821;GBDI01202999;XR_001237099;XR_001237100 MODEL 8964662 protein-coding LOC102006239 olfactory receptor 51J1-like NW_004955414 21313687 21314640 + 102006239 AGCD01015412;XM_005380495 XP_005380552 MODEL 9032861 protein-coding Plekhg4 pleckstrin homology and RhoGEF domain containing G4 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955484 9344830 9356182 - 102006352 AGCD01058415;GBDF01154360;XM_005403662;XM_013503891;XM_013503892 XP_005403719;XP_013359345;XP_013359346 MODEL 8864627 ncrna LOC102004091 uncharacterized LOC102004091 NW_004955427 3205789 3215694 + 102004091 AGCD01026926;AGCD01026927;GBDF01288983;XR_001234360 MODEL 9044027 protein-coding Rgs16 regulator of G protein signaling 16 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) NW_004955406 21439536 21444822 - 102018361 AGCD01006128;GBDI01354177;XM_005375005 XP_005375062 MODEL 8872815 protein-coding Ppm1m protein phosphatase, Mg2+/Mn2+ dependent 1M ENCODES a protein that exhibits manganese ion binding (ortholog); phosphoprotein phosphatase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955532 3854699 3858923 + 102010518 AGCD01070302;GBCB01040412;GBDK01008951;XM_005410373;XM_013507628 XP_005410430;XP_013363082 MODEL 730469073 snorna SNORA51 Small nucleolar RNA SNORA51 8885347 ncrna LOC102005533 uncharacterized LOC102005533 NW_004955402 4830997 4925604 + 102005533 AGCD01000128;AGCD01000129;GBDF01177440;XR_001235012;XR_259028 MODEL 39133252 snrna U4 U4 spliceosomal RNA 8852069 protein-coding LOC102022366 bcl-2-like protein 2 NW_004955409 37012376 37017785 - 102022366 AGCD01010488;GBDK01240448;XM_005377084;XM_005377085 XP_005377141;XP_005377142 MODEL 730469436 snrna U11 U11 spliceosomal RNA 10205578 ncrna LOC106147445 uncharacterized LOC106147445 NW_004955559 2113545 2115031 - 106147445 AGCD01073691;GBDI01355253;XR_001232350 MODEL 8914789 ncrna LOC102010085 uncharacterized LOC102010085 NW_004955518 1844184 1923729 + 102010085 AGCD01067766;AGCD01067767;AGCD01067768;AGCD01067769;GBDJ01260326;XR_264565 MODEL 8776788 protein-coding Snx21 sorting nexin family member 21 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN early endosome membrane (ortholog) NW_004955445 11454802 11462625 - 102027584 AGCD01039695;GBDJ01139116;XM_005392407 XP_005392464 MODEL 8790733 protein-coding LOC102018274 Wilms tumor protein 1-interacting protein-like NW_004955466 5534404 5550454 - 102018274 AGCD01050882;GBDF01040845;XM_013521879 XP_013377333 MODEL 8860040 protein-coding Rbpjl recombination signal binding protein for immunoglobulin kappa J region like ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); maturity-onset diabetes of the young type 1 (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955445 12017500 12029507 - 102008674 AGCD01039731;GBCE01101674;XM_005392436 XP_005392493 MODEL 8860293 ncrna LOC102019842 uncharacterized LOC102019842 NW_004955532 3447498 3450239 - 102019842 AGCD01070280;GBDF01044282;XR_264729 MODEL 8722343 protein-coding Wdr12 WD repeat domain 12 INVOLVED IN maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955457 11947816 11970066 + 102030389 AGCD01046996;AGCD01046997;GBDF01016523;XM_005397046;XM_005397047 XP_005397103;XP_005397104 MODEL 9006859 ncrna LOC102003067 uncharacterized LOC102003067 NW_004955438 9649804 9652236 + 102003067 AGCD01035184;GBDF01148894;XR_261923 MODEL 10192690 pseudo LOC102013279 Ig kappa chain V-IV region-like NW_004955470 81723 82368 + 102013279 AGCD01052599 MODEL 39133453 snorna SNORD58 Small nucleolar RNA SNORD58 9041715 protein-coding LOC102010858 heterogeneous nuclear ribonucleoprotein U-like protein 2 NW_004957878 562 1192 + 102010858 AGCD01081274;XM_005415235 XP_005415292 MODEL 8751717 protein-coding LOC102011232 liver carboxylesterase 1-like NW_004955433 13570134 13598314 - 102011232 AGCD01031695;AGCD01031696;GBCQ01034315;XM_005388340;XM_005388341 XP_005388397;XP_005388398 MODEL 9063620 ncrna LOC102005908 uncharacterized LOC102005908 NW_004955410 34743414 34763395 - 102005908 AGCD01011404;GBDF01221838;XR_001232718 MODEL 626189182 snorna SNORA81 Small nucleolar RNA SNORA81 9016982 protein-coding Timm22 translocase of inner mitochondrial membrane 22 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN carrier pathway of mitochondrial protein import; ASSOCIATED WITH colon adenocarcinoma (ortholog); combined oxidative phosphorylation deficiency 43 (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); TIM22 mitochondrial import inner membrane insertion complex (ortholog) NW_004955481 2494943 2501532 + 102029078 AGCD01056876;GBDF01153078;XM_005402649 XP_005402706 MODEL 8952718 protein-coding Pip4p2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity (ortholog); INVOLVED IN negative regulation of phagocytosis (ortholog); phosphatidylinositol dephosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN late endosome membrane (ortholog); lysosomal membrane (ortholog); phagocytic vesicle membrane (ortholog) NW_004955417 7769365 7825892 - 102013504 AGCD01018015;AGCD01018016;GBDF01209250;XM_013512854 XP_013368308 MODEL 8848356 protein-coding Secisbp2 SECIS binding protein 2 ENCODES a protein that exhibits DNA binding (ortholog); mRNA 3'-UTR binding (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN mRNA stabilization (ortholog); negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); neuron development (ortholog); ASSOCIATED WITH Abnormal Thyroid Hormone Metabolism 1 (ortholog); acute myeloid leukemia (ortholog); amino acid metabolic disorder (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955515 2697370 2729425 - 102017046 AGCD01067259;AGCD01067260;GBDF01079974;XM_005408879;XM_013506887;XM_013506888 XP_005408936;XP_013362341;XP_013362342 MODEL 8869807 protein-coding Ranbp17 RAN binding protein 17 ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955408 23777501 24092993 + 102019032 AGCD01008590;AGCD01008591;AGCD01008592;AGCD01008593;AGCD01008594;GBDF01045449;XM_005376323;XM_005376324;XM_005376325;XM_005376326 XP_005376380;XP_005376381;XP_005376382;XP_005376383 MODEL 730469007 snorna SNORA17 Small nucleolar RNA SNORA17 9022021 protein-coding Ephb4 EPH receptor B4 ENCODES a protein that exhibits ephrin receptor activity (ortholog); transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell adhesion (ortholog); cell migration involved in sprouting angiogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriovenous malformation (ortholog); autistic disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955573 132328 150879 + 102012701 AGCD01074964;GBDK01146486;XM_005413688;XM_013509481 XP_005413745;XP_013364935 MODEL 8856369 protein-coding Pold4 DNA polymerase delta 4, accessory subunit INVOLVED IN DNA-templated DNA replication (ortholog); positive regulation of endothelial cell proliferation (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH intellectual disability (ortholog); FOUND IN delta DNA polymerase complex (ortholog); nucleus (ortholog) NW_004955422 18116604 18118280 + 102020020 AGCD01022937;GBDJ01139891;XM_005384335;XM_005384336 XP_005384392;XP_005384393 MODEL 8858932 protein-coding Sf3b6 splicing factor 3b subunit 6 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN blastocyst formation (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); ovarian cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); precatalytic spliceosome (ortholog) NW_004955469 6275894 6286908 - 102024444 AGCD01052376;AGCD01052377;GBCE01001807;XM_005400375 XP_005400432 MODEL 8971175 protein-coding Bzw2 basic leucine zipper and W2 domains 2 INVOLVED IN regulation of translational initiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog) NW_004955410 19833008 19874647 + 102022680 AGCD01011031;GBDI01063049;XM_005377337 XP_005377394 MODEL 9034606 ncrna LOC102011689 uncharacterized LOC102011689 NW_004955511 5972095 5975480 + 102011689 AGCD01066594;XR_264436 MODEL 730469505 snorna SNORA38 Small nucleolar RNA SNORA38 9020952 protein-coding Slc35b2 solute carrier family 35 member B2 ENCODES a protein that exhibits 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity (ortholog); INVOLVED IN 3'-phosphoadenosine 5'-phosphosulfate transport (ortholog); 5'-adenylyl sulfate transmembrane transport (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hypomyelinating leukodystrophy 26 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); membrane (ortholog) NW_004955437 9878592 9882431 - 102020711 AGCD01034548;GBDI01256888;XM_005389810 XP_005389867 MODEL 8861735 pseudo LOC102019486 glycolipid transfer protein-like NW_004955464 11913275 11914481 - 102019486 AGCD01050168 MODEL 8794965 protein-coding Traf4 TNF receptor associated factor 4 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); thioesterase binding (ortholog); INVOLVED IN positive regulation of JNK cascade (ortholog); respiratory gaseous exchange by respiratory system (ortholog); respiratory tube development (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) NW_004955481 4410906 4417553 - 102021125 AGCD01056936;AGCD01056937;GBBH01119444;GBDJ01179774;XM_005402714 XP_005402771 MODEL 39133257 snrna U4 U4 spliceosomal RNA 8881021 protein-coding LOC102008175 translation initiation factor IF-2-like NW_004955451 5786082 5786923 - 102008175 AGCD01043175;GBCQ01165193;GBDJ01098516;XM_013519403 XP_013374857 MODEL 15036839 trna Trnac-aca transfer RNA cysteine (anticodon ACA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978832 8760968 protein-coding Rpa3 replication protein A3 ENCODES a protein that exhibits damaged DNA binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); DNA repair (ortholog); DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN DNA replication factor A complex (ortholog); nucleus (ortholog) NW_004955432 14723933 14727356 - 102027443 AGCD01031047;GBDI01168506;XM_005388093 XP_005388150 MODEL 8772615 pseudo LOC102012067 high mobility group protein B1 pseudogene NW_004955409 17116938 17117921 - 102012067 AGCD01009766;XR_259785 MODEL 9067626 protein-coding Spats2 spermatogenesis associated serine rich 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955500 8174233 8300424 + 102018308 AGCD01063983;AGCD01063984;AGCD01063985;AGCD01063986;GBDF01304771;XM_013505714;XM_013505715 XP_013361168;XP_013361169 MODEL 8916367 protein-coding Rras2 RAS related 2 ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); Ras protein signal transduction (ortholog); ASSOCIATED WITH body dysmorphic disorder (ortholog); central nervous system germ cell tumor (ortholog); cervical cancer (ortholog); FOUND IN Golgi membrane (ortholog); plasma membrane (ortholog) NW_004955414 29482502 29546102 - 102022808 AGCD01015705;AGCD01015706;GBCE01134839;GBDK01194561;XM_005415344 XP_005415401 MODEL 8777412 ncrna LOC102004861 uncharacterized LOC102004861 NW_004955553 760578 769863 + 102004861 AGCD01072863;AGCD01072864;GBDF01279699;XR_001232281;XR_264931 MODEL 8745670 protein-coding Ptk7 protein tyrosine kinase 7 (inactive) ENCODES a protein that exhibits ATP binding (ortholog); kinase activity (ortholog); transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axis elongation (ortholog); cell migration (ortholog); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell-cell junction (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955437 9037933 9094237 + 102019323 AGCD01034515;GBDK01100991;XM_005390133;XM_013516906 XP_005390190;XP_013372360 MODEL 8860731 protein-coding LOC102008917 keratin-associated protein 20-2-like NW_004955407 30198704 30198859 + 102008917 AGCD01007628;XM_005375646 XP_005375703 MODEL 8932060 protein-coding Srf serum response factor ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); associative learning (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); cardiomyopathy (ortholog); Cardiovascular Abnormalities (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955437 9100546 9109305 + 102019639 AGCD01034516;GBCB01002619;GBCQ01154048;XM_013516907 XP_013372361 MODEL 8952084 pseudo LOC102007372 60S ribosomal protein L26-like NW_004955441 13050841 13051739 - 102007372 AGCD01037141 MODEL 8845963 protein-coding Prss48 serine protease 48 NW_004955471 5856588 5872812 + 102022911 AGCD01053114;GBDF01046234;XM_013522888 XP_013378342 MODEL 8711859 ncrna LOC102004093 uncharacterized LOC102004093 NW_004955506 3778930 3780204 - 102004093 AGCD01065319;GBDF01208779;XR_264347 MODEL 10226339 protein-coding Rnasek ribonuclease K ENCODES a protein that exhibits RNA endonuclease activity (ortholog); INVOLVED IN endosomal lumen acidification (ortholog); proton transmembrane transport (ortholog); receptor-mediated endocytosis (ortholog); FOUND IN endomembrane system (ortholog); membrane (ortholog) NW_004955467 9914907 9917051 - 106146252 AGCD01051535;GBDK01000779;XM_005399580 XP_005399637 MODEL 9016095 ncrna LOC102011691 uncharacterized LOC102011691 NW_004955432 22073703 22077752 + 102011691 AGCD01031246;GBDF01194467;XR_001234645 MODEL 8786214 protein-coding Plekhg5 pleckstrin homology and RhoGEF domain containing G5 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN endothelial cell chemotaxis (ortholog); endothelial cell migration (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); autosomal recessive distal hereditary motor neuronopathy 4 (ortholog); FOUND IN anchoring junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955486 6099654 6121805 + 102010165 AGCD01059108;GBBH01085966;XM_005404088;XM_013504284;XM_013504285;XM_013504286;XM_013504288 XP_005404145;XP_013359738;XP_013359739;XP_013359740;XP_013359742 MODEL 9026201 ncrna LOC102016320 uncharacterized LOC102016320 NW_004955443 16490629 16501985 + 102016320 AGCD01038569;GBDF01114412;XR_262211 MODEL 8908393 pseudo LOC102013280 olfactory receptor 502-like NW_004955414 23688282 23689224 - 102013280 AGCD01015516 MODEL 8758766 protein-coding LOC102005537 protein S100-A15A NW_004955592 62455 67295 + 102005537 AGCD01076300;XM_005414601 XP_005414658 MODEL 8833359 protein-coding Rgs17 regulator of G protein signaling 17 INVOLVED IN response to amphetamine (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); nucleus (ortholog) NW_004955439 8687775 8805229 + 102025048 AGCD01035806;AGCD01035807;AGCD01035808;AGCD01035809;AGCD01035810;AGCD01035811;AGCD01035812;AGCD01035813;GBDF01116147;XM_005390564;XM_005390565;XM_013517293 XP_005390621;XP_005390622;XP_013372747 MODEL 39133271 snrna U4 U4 spliceosomal RNA 8816416 ncrna LOC102005909 uncharacterized LOC102005909 NW_004955411 1623772 1628626 - 102005909 AGCD01011485;GBDF01224028;XR_001232783;XR_259911 MODEL 730469514 snorna SNORA81 Small nucleolar RNA SNORA81 9005513 protein-coding Prkaca protein kinase cAMP-activated catalytic subunit alpha ENCODES a protein that exhibits ATP binding (ortholog); cAMP-dependent protein kinase activity (ortholog); histone H1-4S35 kinase activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); bone resorption (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH ACTH-independent macronodular adrenal hyperplasia 1 (ortholog); adrenal cortical adenoma (ortholog); Adrenal Gland Neoplasms (ortholog); FOUND IN acrosomal vesicle (ortholog); axoneme (ortholog); cAMP-dependent protein kinase complex (ortholog) NW_004955415 32794172 32807944 - 102010480 AGCD01016734;GBDK01132638;XM_013512354 XP_013367808 MODEL 8789528 protein-coding Timm23b translocase of inner mitochondrial membrane 23 homolog B FOUND IN mitochondrion (ortholog) NW_004955556 414345 435182 - 102025949 AGCD01073175;GBDJ01378436;XM_005412558 XP_005412615 MODEL 9035215 protein-coding Ranbp2 RAN binding protein 2 ENCODES a protein that exhibits kinase activator activity (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN centrosome localization (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); NLS-bearing protein import into nucleus (ortholog); PARTICIPATES IN CRM1 export pathway; mitochondria transport pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); autistic disorder (ortholog); FOUND IN annulate lamellae (ortholog); cytoplasmic periphery of the nuclear pore complex (ortholog); nuclear envelope (ortholog) NW_004955470 12180426 12247737 + 102009934 AGCD01052922;AGCD01052923;AGCD01052924;AGCD01052925;GBDF01156107;XM_005400808;XM_005400809;XM_005400811 XP_005400865;XP_005400866;XP_005400868 MODEL 8962794 pseudo LOC102018283 RNA-binding protein 34 pseudogene NW_004955475 9524183 9525658 + 102018283 AGCD01055068 MODEL 8773419 pseudo LOC102006241 40S ribosomal protein S27-like pseudogene NW_004955475 4541672 4542105 + 102006241 AGCD01054882 MODEL 8949998 protein-coding Snx22 sorting nexin 22 ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); osteogenesis imperfecta (ortholog) NW_004955450 11246817 11248870 - 102010010 AGCD01042652;GBBH01150804;GBDK01011077;XM_013519037;XM_013519038;XR_001235925 XP_013374491;XP_013374492 MODEL 8964783 protein-coding Rbpms RNA binding protein, mRNA processing factor ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN mitotic cytokinesis (ortholog); protein-containing complex assembly (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955463 6817570 6973393 + 102008510 AGCD01049706;AGCD01049707;AGCD01049708;AGCD01049709;GBCQ01000539;GBDI01292820;XM_005398470 XP_005398527 MODEL 8798465 protein-coding Sfi1 SFI1 centrin binding protein ENCODES a protein that exhibits phosphatase binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955455 5667105 5744878 + 102012729 AGCD01045746;AGCD01045747;AGCD01045748;AGCD01045749;AGCD01045750;AGCD01045751;GBDK01319767;XM_005396332;XM_013520407;XM_013520408;XM_013520409;XM_013520410;XM_013520412;XM_013520413;XM_013520414;XM_013520415;XM_013520416;XM_013520417 XP_005396389;XP_013375861;XP_013375862;XP_013375863;XP_013375864;XP_013375866;XP_013375867;XP_013375868;XP_013375869;XP_013375870;XP_013375871 MODEL 626189209 snorna SNORA51 Small nucleolar RNA SNORA51 8785958 protein-coding Wdr13 WD repeat domain 13 ENCODES a protein that exhibits promoter-specific chromatin binding (ortholog); INVOLVED IN negative regulation of type B pancreatic cell proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); esophageal atresia (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955543 182279 190435 + 102022017 AGCD01071563;GBDJ01277750;XM_005411270;XM_005411271 XP_005411327;XP_005411328 MODEL 10085714 ncrna LOC106150342 uncharacterized LOC106150342 NW_004955472 2673390 2679087 + 106150342 AGCD01053482;AGCD01053483;GBDI01215196;XR_001237103 MODEL 39131326 protein-coding PPM1N protein phosphatase, Mg2+/Mn2+ dependent 1N (putative) 39133455 snorna SNORD58 Small nucleolar RNA SNORD58 9030185 protein-coding Slc35b3 solute carrier family 35 member B3 ENCODES a protein that exhibits 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity (ortholog); INVOLVED IN 5'-adenylyl sulfate transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi membrane (ortholog); trans-Golgi network (ortholog) NW_004955465 5599728 5621031 + 102023884 AGCD01050431;GBDF01010803;XM_005398841;XM_005398842;XM_005398843 XP_005398898;XP_005398899;XP_005398900 MODEL 8819606 protein-coding LOC102011234 40S ribosomal protein S17-like NW_004955523 399503 400042 - 102011234 AGCD01068454;GBDJ01263809;XM_013507145 XP_013362599 MODEL 8709213 ncrna LOC102008177 uncharacterized LOC102008177 NW_004955404 49258791 49264921 - 102008177 AGCD01004518;GBCQ01074933;XR_259344 MODEL 8936265 pseudo LOC102010087 heparan-alpha-glucosaminide N-acetyltransferase pseudogene NW_004955434 9056708 9057564 - 102010087 AGCD01032287 MODEL 8949222 trna Trnac-gca transfer RNA cysteine (anticodon GCA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978833 AGCD01043512;AGCD01043513;AGCD01043523;AGCD01057606;AGCD01060445;AGCD01060446;AGCD01060454;AGCD01060455;AGCD01060458;AGCD01060459;AGCD01060460;AGCD01060462;AGCD01064185;AGCD01079692;AGCD01079693;AGCD01079767;AGCD01079768 MODEL 9037931 protein-coding Pip5k1a phosphatidylinositol-4-phosphate 5-kinase type 1 alpha ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); kinase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell chemotaxis (ortholog); fibroblast migration (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; E-cadherin signaling pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant intellectual developmental disorder 60 with seizures (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lamellipodium (ortholog) NW_004955588 555818 605459 + 102027700 AGCD01076115;AGCD01076116;AGCD01076117;GBBH01027015;XM_013509927;XM_013509928;XM_013509929;XM_013509930;XR_001232530 XP_013365381;XP_013365382;XP_013365383;XP_013365384 MODEL 730469036 snorna SNORA17 Small nucleolar RNA SNORA17 8933465 protein-coding Pheta2 PH domain containing endocytic trafficking adaptor 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN endosome organization (ortholog); receptor recycling (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN clathrin-coated vesicle (ortholog); early endosome (ortholog); recycling endosome (ortholog) NW_004955413 27475658 27480879 + 102005791 AGCD01014508;AGCD01014509;GBDF01082922;XM_005379400;XM_005379401;XM_005379402;XM_005379403;XM_013511581;XM_013511582 XP_005379457;XP_005379458;XP_005379459;XP_005379460;XP_013367035;XP_013367036 MODEL 8699639 protein-coding LOC102008539 sodium- and chloride-dependent transporter XTRP3A-like NW_004955420 26201378 26228005 + 102008539 AGCD01021392;AGCD01021393;AGCD01021394;AGCD01021395;GBCQ01102604;XM_013513346 XP_013368800 MODEL 39131367 protein-coding C10orf143 chromosome 10 open reading frame 143 730469518 snorna SNORA38 Small nucleolar RNA SNORA38 8766207 ncrna LOC102007380 uncharacterized LOC102007380 NW_004955445 17614758 17619898 - 102007380 AGCD01039895;GBDF01145045;XR_262349 MODEL 8853867 ncrna LOC102019844 uncharacterized LOC102019844 NW_004955533 934951 951060 + 102019844 AGCD01070335;GBDK01153925;XR_001232036;XR_001232037;XR_001232038;XR_264743;XR_264744 MODEL 8868564 ncrna LOC102003068 uncharacterized LOC102003068 NW_004955439 1703273 1722660 - 102003068 AGCD01035626;GBDF01124953;XR_001235210;XR_261961 MODEL 8983305 protein-coding LOC102022372 chromosome unknown open reading frame, human C6orf120 NW_004955411 3927722 3929720 - 102022372 AGCD01011562;GBDK01232050;XM_005377643;XM_005377644;XM_005377645 XP_005377700;XP_005377701;XP_005377702 MODEL 8767205 ncrna LOC102019487 uncharacterized LOC102019487 NW_004955412 6217988 6251126 + 102019487 AGCD01012668;AGCD01012669;GBDF01075391;XR_001232893;XR_001232894;XR_259979 MODEL 9000032 ncrna LOC102004095 uncharacterized LOC102004095 NW_004955507 3788141 3791465 + 102004095 AGCD01065637;GBBH01163274;XR_001231638 MODEL 10334409 ncrna LOC106147446 uncharacterized LOC106147446 NW_004955560 354475 357738 + 106147446 AGCD01073721;GBDF01286169;XR_001232353 MODEL 8732258 pseudo LOC102013281 40S ribosomal protein SA pseudogene NW_004955472 1342714 1343590 + 102013281 AGCD01053388 MODEL 8910622 protein-coding Rnasel ribonuclease L ENCODES a protein that exhibits identical protein binding (ortholog); ribonucleoprotein complex binding (ortholog); RNA binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of viral genome replication (ortholog); positive regulation of D-glucose import across plasma membrane (ortholog); ASSOCIATED WITH Animal Viral Hepatitis (ortholog); anthrax disease (ortholog); Cardiovirus Infections (ortholog); FOUND IN cytosol (ortholog); nuclear matrix (ortholog) NW_004955406 21413950 21424860 - 102018057 AGCD01006127;GBDJ01421087;XM_005375004 XP_005375061 MODEL 730469538 snrna U11 U11 spliceosomal RNA 8942620 protein-coding Rgs18 regulator of G protein signaling 18 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955406 29573127 29594991 + 102016232 AGCD01006335;GBDK01432974;XM_005375096 XP_005375153 MODEL 8823307 pseudo LOC102012068 ribose-phosphate pyrophosphokinase 1-like NW_004955409 26469788 26470881 - 102012068 AGCD01010186 MODEL 8969955 pseudo LOC102005910 nicotinamide phosphoribosyltransferase-like NW_004955463 5062434 5074910 - 102005910 AGCD01049628;AGCD01049629 MODEL 730469178 snorna SNORA84 Small nucleolar RNA SNORA84 8936107 protein-coding Timm29 translocase of inner mitochondrial membrane 29 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955495 2005929 2007238 + 102028873 AGCD01061744;AGCD01061745;GBCE01024245;GBCE01024246;XM_013505174 XP_013360628 MODEL 8847952 protein-coding Prkacb protein kinase cAMP-activated catalytic subunit beta ENCODES a protein that exhibits ATP binding (ortholog); cAMP-dependent protein kinase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN negative regulation of meiotic cell cycle (ortholog); negative regulation of smoothened signaling pathway (ortholog); negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN adenosine signaling pathway; dopamine signaling pathway; dopamine signaling pathway via D1 family of receptors; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenal cortical adenoma (ortholog); biliary tract benign neoplasm (ortholog); FOUND IN cAMP-dependent protein kinase complex (ortholog); centrosome (ortholog); ciliary base (ortholog) NW_004955423 9630308 9747820 - 102004726 AGCD01023663;AGCD01023664;AGCD01023665;GBCB01073774;XM_005385166 XP_005385223 MODEL 8757281 protein-coding Srfbp1 serum response factor binding protein 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955521 105565 160906 + 102005626 AGCD01068129;AGCD01068130;GBDF01052516;XM_005409286 XP_005409343 MODEL 8806556 protein-coding LOC102010861 chromosome unknown open reading frame, human C1orf94 INVOLVED IN intracellular protein localization (ortholog); mRNA destabilization (ortholog); single fertilization (ortholog); ASSOCIATED WITH testicular germ cell cancer (ortholog); Testicular Germ Cell Tumor (ortholog); uterine carcinosarcoma (ortholog) NW_004955452 12288967 12325948 + 102010861 AGCD01044350;GBDF01048888;XM_005395119;XM_005395120;XM_005395121 XP_005395176;XP_005395177;XP_005395178 MODEL 730469548 snorna SNORA52 Small nucleolar RNA SNORA52 8803593 protein-coding Plekhg6 pleckstrin homology and RhoGEF domain containing G6 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cystic fibrosis (ortholog); FOUND IN cell junction (ortholog); cleavage furrow (ortholog) NW_004955413 3969459 3982348 + 102012179 AGCD01013590;AGCD01013591;GBBH01193665;XM_005378757 XP_005378814 MODEL 8969459 pseudo LOC102016328 40S ribosomal protein S28 pseudogene NW_004955448 424686 428304 - 102016328 AGCD01041230;XM_005392984 MODEL 8876262 pseudo LOC102005539 integrin beta-1-like NW_004955602 28357 31946 + 102005539 AGCD01076761 MODEL 9047488 protein-coding Traf5 TNF receptor associated factor 5 ENCODES a protein that exhibits identical protein binding (ortholog); thioesterase binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN CD40 signaling pathway (ortholog); interleukin-17-mediated signaling pathway (ortholog); mRNA stabilization (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN CD40 receptor complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955489 935601 995162 - 102014056 AGCD01059824;GBCB01012256;XM_005404503;XR_001231193;XR_001231194 XP_005404560 MODEL 10156556 protein-coding Ptma prothymosin alpha ENCODES a protein that exhibits calcium ion binding (ortholog); DNA-binding transcription factor binding (ortholog); histone binding (ortholog); INVOLVED IN chromatin organization (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH adenoma (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955453 4036503 4037788 - 106149798 AGCD01044672;GBBH01002333;GBDF01000055;XM_013519995 XP_013375449 MODEL 9016187 protein-coding Rpa4 replication protein A4 INVOLVED IN DNA damage checkpoint signaling (ortholog); DNA repair (ortholog); nuclear DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; FOUND IN DNA replication factor A complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955503 2514460 2516973 + 102018415 AGCD01064608;XM_005406926 XP_005406983 MODEL 8854423 protein-coding Poldip2 DNA polymerase delta interacting protein 2 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN error-free translesion synthesis (ortholog); mitochondrion organization (ortholog); mitotic spindle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell-cell junction (ortholog); midbody (ortholog); mitochondrial matrix (ortholog) NW_004955481 4776721 4785817 + 102006912 AGCD01056952;GBDF01009609;GBDI01062561;XM_005402761 XP_005402818 MODEL 8876913 protein-coding Slc35b4 solute carrier family 35 member B4 ENCODES a protein that exhibits UDP-N-acetylglucosamine transmembrane transporter activity (ortholog); UDP-xylose transmembrane transporter activity (ortholog); INVOLVED IN regulation of gluconeogenesis (ortholog); UDP-N-acetylglucosamine transmembrane transport (ortholog); UDP-xylose transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955410 33695985 33728749 + 102004149 AGCD01011380;AGCD01011381;AGCD01011382;AGCD01011383;AGCD01011384;GBDF01160017;XM_005377537 XP_005377594 MODEL 8703728 protein-coding Rrbp1 ribosome binding protein 1 INVOLVED IN signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955415 26601707 26634747 - 102010154 AGCD01016600;AGCD01016601;GBBH01001406;XM_013512263 XP_013367717 MODEL 8728037 protein-coding Ephb6 EPH receptor B6 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase activity (ortholog); SH2 domain binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); positive regulation of T cell costimulation (ortholog); T cell mediated immunity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog) NW_004955494 812482 820679 + 102003560 AGCD01061385;GBDF01008198;XM_005405381;XM_005405383;XM_013505009;XM_013505010;XM_013505011;XM_013505012 XP_005405438;XP_005405440;XP_013360463;XP_013360464;XP_013360465;XP_013360466 MODEL 8711893 protein-coding Spats2l spermatogenesis associated serine rich 2 like ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); protein-containing complex (ortholog) NW_004955403 930622 1085906 - 102007171 AGCD01001712;AGCD01001713;AGCD01001714;AGCD01001715;GBCC01017701;XM_005373252;XM_005373253 XP_005373309;XP_005373310 MODEL 10243306 protein-coding LOC106147447 kielin/chordin-like protein NW_004955560 1887125 1928100 - 106147447 AGCD01073777;AGCD01073778;AGCD01073779;AGCD01073780;AGCD01073781;AGCD01073782;AGCD01073783;AGCD01073784;AGCD01073785;XM_013509068 XP_013364522 MODEL 15036857 trna Trnad-auc transfer RNA aspartic acid (anticodon AUC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978828 8769845 protein-coding LOC102018289 histone H4 NW_004955483 827742 828500 - 102018289 AGCD01057632;XM_013503798 XP_013359252 MODEL 8741746 protein-coding Ranbp3 RAN binding protein 3 ENCODES a protein that exhibits R-SMAD binding (ortholog); small GTPase binding (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 3495179 3549528 + 102020134 AGCD01061861;AGCD01061862;GBDF01011028;XM_005405743;XM_005405744;XM_005405745;XM_005405746;XM_005405747;XM_005405748;XM_005405749;XM_013505313 XP_005405800;XP_005405801;XP_005405802;XP_005405803;XP_005405804;XP_005405805;XP_005405806;XP_013360767 MODEL 39131540 protein-coding C11orf53 chromosome 11 open reading frame 53 8808010 protein-coding Prss50 serine protease 50 ENCODES a protein that exhibits threonine-type endopeptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955420 25424082 25427705 + 102006920 AGCD01021358;GBDF01050276;GBDF01050277;XM_013513353 XP_013368807 MODEL 8941559 protein-coding Rbpms2 RNA binding protein, mRNA processing factor 2 ENCODES a protein that exhibits identical protein binding (ortholog); mRNA binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of smooth muscle cell differentiation (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955450 10746708 10770540 + 102009670 AGCD01042634;AGCD01042635;GBCB01088798;XM_013518834 XP_013374288 MODEL 8717136 protein-coding LOC102006243 calsyntenin-1 NW_004955479 9732376 9734653 + 102006243 AGCD01056494;GBCE01076233;GBDI01068209;XM_013503286 XP_013358740 MODEL 8901851 pseudo LOC102011694 casein kinase I NW_004955434 9624730 9625478 - 102011694 AGCD01032306;XR_261649 MODEL 9029933 protein-coding Ppm1n protein phosphatase, Mg2+/Mn2+ dependent 1N (putative) ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955574 11728 16786 + 102012702 AGCD01075077;GBDF01178017;XM_013509550;XM_013509551;XM_013509553;XM_013509554;XM_013509555 XP_013365004;XP_013365005;XP_013365007;XP_013365008;XP_013365009 MODEL 9026820 protein-coding LOC102007382 cytochrome P450 3A9-like NW_004955573 1366578 1409840 + 102007382 AGCD01075045;AGCD01075046;AGCD01075047;AGCD01075048;GBDI01323456;XM_005413769;XM_005413770 XP_005413826;XP_005413827 MODEL 8967823 protein-coding Sfmbt1 Scm like with four mbt domains 1 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of muscle organ development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955430 2850149 3014859 - 102027772 AGCD01029182;AGCD01029183;AGCD01029184;AGCD01029185;AGCD01029186;AGCD01029187;GBBH01041099;GBDF01043456;XM_013515695;XM_013515696 XP_013371149;XP_013371150 MODEL 39133163 snrna U4 U4 spliceosomal RNA 8809794 protein-coding Secisbp2l SECIS binding protein 2 like ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955409 4926330 4974889 + 102010034 AGCD01009302;AGCD01009303;GBBH01141525;GBDF01160475;XM_013510300 XP_013365754 MODEL 8720420 ncrna LOC102008179 uncharacterized LOC102008179 NW_004955405 32467481 32489401 + 102008179 AGCD01005333;GBDF01013620;XR_001235728 MODEL 10208038 pseudo LOC106150343 lysine-rich coiled-coil protein 1-like NW_004955472 7688506 7690382 + 106150343 AGCD01053625 MODEL 8726199 ncrna LOC102011238 uncharacterized LOC102011238 NW_004955435 16675032 16735309 - 102011238 AGCD01033336;AGCD01033337;GBDF01045771;XR_001234857;XR_001234858;XR_261711;XR_261713 MODEL 8911961 pseudo LOC102010093 ubiquitin carboxyl-terminal hydrolase isozyme L5 pseudogene NW_004955439 3610566 3611918 + 102010093 AGCD01035681 MODEL 8847120 ncrna LOC102008918 uncharacterized LOC102008918 NW_004955408 4765453 4769584 - 102008918 AGCD01008118;GBDF01188494;XR_259660 MODEL 730469234 snorna SNORA17 Small nucleolar RNA SNORA17 8933691 protein-coding Slc35c1 solute carrier family 35 member C1 ENCODES a protein that exhibits GDP-fucose transmembrane transporter activity (ortholog); INVOLVED IN 'de novo' GDP-L-fucose biosynthetic process (ortholog); GDP-fucose import into Golgi lumen (ortholog); GDP-L-fucose salvage (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autistic disorder (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955422 2130561 2139145 - 102019508 AGCD01022480;AGCD01022481;GBDK01090342;XM_005384067;XM_005384068;XM_005384069;XM_005384070 XP_005384124;XP_005384125;XP_005384126;XP_005384127 MODEL 8921307 ncrna LOC102008548 uncharacterized LOC102008548 NW_004955423 309053 319789 + 102008548 AGCD01023411;GBDF01260789;XR_260936 MODEL 8962200 protein-coding Snx24 sorting nexin 24 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955521 1006353 1126062 + 102021382 AGCD01068167;AGCD01068168;AGCD01068169;AGCD01068170;AGCD01068171;AGCD01068172;AGCD01068173;GBCB01022225;XM_013507082;XM_013507083;XM_013507084 XP_013362536;XP_013362537;XP_013362538 MODEL 8714831 ncrna LOC102019845 uncharacterized LOC102019845 NW_004955538 147301 158216 + 102019845 AGCD01070990;GBBH01172789;XR_264783 MODEL 39133454 snorna SNORD58 Small nucleolar RNA SNORD58 9007603 protein-coding LOC102003071 vomeronasal type-1 receptor 4-like NW_004955558 653203 654063 + 102003071 AGCD01073381;XM_005412739 XP_005412796 MODEL 8927885 ncrna LOC102004097 uncharacterized LOC102004097 NW_004955429 17006214 17015442 + 102004097 AGCD01028844;GBDJ01386401;XR_001234486;XR_001234487;XR_001234488;XR_001234489;XR_001234490;XR_261341;XR_261342;XR_261343;XR_261344;XR_261345;XR_261346;XR_261347 MODEL 730468961 snorna SNORA52 Small nucleolar RNA SNORA52 8942296 protein-coding Ranbp3l RAN binding protein 3 like ENCODES a protein that exhibits SMAD binding (ortholog); INVOLVED IN mesenchymal cell differentiation involved in bone development (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of myoblast differentiation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955426 21054463 21106290 - 102011888 AGCD01026578;AGCD01026579;AGCD01026580;GBCQ01004472;XM_013515011;XM_013515013;XM_013515014;XM_013515015 XP_013370465;XP_013370467;XP_013370468;XP_013370469 MODEL 8818526 pseudo LOC102004862 zinc finger protein 649-like NW_004955558 601767 612080 + 102004862 AGCD01073377 MODEL 8905595 protein-coding LOC102005543 PRAME family member 20-like NW_004955615 219115 226336 + 102005543 AGCD01077251;XM_013510139 XP_013365593 MODEL 730469567 snrna U11 U11 spliceosomal RNA 8834455 protein-coding Pip5k1b phosphatidylinositol-4-phosphate 5-kinase type 1 beta ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); INVOLVED IN phosphatidylinositol biosynthetic process (ortholog); phosphatidylinositol metabolic process (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); uropod (ortholog) NW_004955434 4020219 4315072 - 102008762 AGCD01032154;AGCD01032155;AGCD01032156;AGCD01032157;GBCE01043004;XM_005388578;XM_013516346;XM_013516347;XM_013516348;XM_013516349 XP_005388635;XP_013371800;XP_013371801;XP_013371802;XP_013371803 MODEL 8722973 protein-coding Plekhg7 pleckstrin homology and RhoGEF domain containing G7 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955405 29703523 29760551 + 102022562 AGCD01005256;GBDJ01353997;XM_005374457;XM_005374459;XM_005374460;XM_013518255;XM_013518257;XM_013518258;XM_013518264;XM_013518269;XM_013518275 XP_005374514;XP_005374516;XP_005374517;XP_013373709;XP_013373711;XP_013373712;XP_013373718;XP_013373723;XP_013373729 MODEL 8861832 protein-coding Rgs19 regulator of G protein signaling 19 ENCODES a protein that exhibits actin binding (ortholog); G-protein alpha-subunit binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); chemical synaptic transmission (ortholog); endothelial cell migration (ortholog); ASSOCIATED WITH high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN brush border (ortholog); cell junction (ortholog); clathrin-coated vesicle (ortholog) NW_004955528 183067 185703 + 102022632 AGCD01069514;GBCE01116836;GBDJ01317429;XM_013507518 XP_013362972 MODEL 8953501 protein-coding LOC102007386 vomeronasal type-1 receptor 1-like NW_004955584 327390 329695 + 102007386 AGCD01075939;GBDK01158023;XM_005414355 XP_005414412 MODEL 8942995 ncrna LOC102012069 uncharacterized LOC102012069 NW_004955410 7679839 7699275 + 102012069 AGCD01010721;AGCD01010722;GBCE01185810;XR_259825 MODEL 730469465 snorna SNORA38 Small nucleolar RNA SNORA38 8987757 protein-coding Timm44 translocase of inner mitochondrial membrane 44 ENCODES a protein that exhibits enzyme binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); intracellular protein transport (ortholog); response to 3,3',5-triiodo-L-thyronine (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955563 1328374 1342011 + 102018138 AGCD01074140;AGCD01074141;GBDJ01080690;XM_005413138 XP_005413195 MODEL 8885614 pseudo LOC102010862 E3 ubiquitin-protein ligase TRIM23 pseudogene NW_004955405 30595460 30597274 + 102010862 AGCD01005276 MODEL 8940395 protein-coding LOC102019488 dehydrogenase/reductase SDR family member 7-like NW_004955466 9449071 9476610 + 102019488 AGCD01051041;GBCQ01037453;XM_005399182 XP_005399239 MODEL 8764522 protein-coding Prss53 serine protease 53 ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955493 7921335 7927233 - 102020456 AGCD01061240;GBDJ01350491;XM_013504760 XP_013360214 MODEL 8947146 ncrna LOC102016329 uncharacterized LOC102016329 NW_004955448 6905673 6906316 + 102016329 AGCD01041396;GBDJ01045474;XR_262461 MODEL 8925580 ncrna LOC102013282 uncharacterized LOC102013282 NW_004955415 3826712 3849145 + 102013282 AGCD01015954;AGCD01015955;AGCD01015956;XR_001233214;XR_260262 MODEL 8750528 protein-coding Phex phosphate regulating endopeptidase X-linked INVOLVED IN bone development (ortholog); bone mineralization (ortholog); cellular response to parathyroid hormone stimulus (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Craniofacial Abnormalities (ortholog); Dwarfism (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955509 2357263 2546802 + 102012111 AGCD01065997;AGCD01065998;AGCD01065999;AGCD01066000;AGCD01066001;AGCD01066002;AGCD01066003;AGCD01066004;GBCE01124064;XM_005407827 XP_005407884 MODEL 8888524 protein-coding Rpain RPA interacting protein INVOLVED IN protein import into nucleus (ortholog); response to UV (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Dwarfism (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); PML body (ortholog) NW_004955467 10780818 10788137 + 102027504 AGCD01051583;GBDF01053986;XM_005399644 XP_005399701 MODEL 9041590 protein-coding LOC102005911 gamma-aminobutyric acid receptor subunit rho-2 NW_004955411 16026663 16070295 - 102005911 AGCD01011964;GBDK01413093;XM_005377748 XP_005377805 MODEL 9000566 protein-coding Ptms parathymosin ENCODES a protein that exhibits zinc ion binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955413 4376955 4378253 + 102029065 AGCD01013612;GBCQ01007684;GBDJ01018919;XM_013511349 XP_013366803 MODEL 8857812 protein-coding Wdr17 WD repeat domain 17 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955403 31559972 31658899 - 102017620 AGCD01002421;AGCD01002422;GBDK01228794;XM_005373519;XM_005373520;XM_005373521 XP_005373576;XP_005373577;XP_005373578 MODEL 8872126 protein-coding Poldip3 DNA polymerase delta interacting protein 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN poly(A)+ mRNA export from nucleus (ortholog); positive regulation of translation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nuclear speck (ortholog) NW_004955413 27944109 27968156 - 102011755 AGCD01014538;AGCD01014539;GBBH01060544;XM_005379420 XP_005379477 MODEL 8711873 ncrna LOC102006247 uncharacterized LOC102006247 NW_004955418 22849622 22877924 - 102006247 AGCD01019292;GBDF01144012;XR_260583 MODEL 8923083 protein-coding LOC102022374 caspase-4 NW_004955412 7744809 7814990 - 102022374 AGCD01012703;AGCD01012704;AGCD01012705;GBDI01278598;XM_005378000;XM_005378001;XM_005378002;XM_005378004;XM_013511166;XM_013511167;XM_013511168 XP_005378057;XP_005378058;XP_005378059;XP_005378061;XP_013366620;XP_013366621;XP_013366622 MODEL 9055588 protein-coding Ppme1 protein phosphatase methylesterase 1 ENCODES a protein that exhibits lncRNA binding (ortholog); protein kinase binding (ortholog); protein methylesterase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955414 17384695 17444269 - 102009272 AGCD01015241;GBDK01143985;XM_005379925 XP_005379982 MODEL 8777477 ncrna LOC102005544 uncharacterized LOC102005544 NW_004955403 19218644 19229973 + 102005544 AGCD01002120;GBDF01056356;XR_001233395 MODEL 730469043 snorna SNORA84 Small nucleolar RNA SNORA84 8717799 protein-coding Spc24 SPC24 component of NDC80 kinetochore complex INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); thymoma (ortholog); FOUND IN kinetochore (ortholog); Ndc80 complex (ortholog); nucleolus (ortholog) NW_004955774 5456 9810 - 102008681 AGCD01078321;GBDF01226288;XM_005415107 XP_005415164 MODEL 8957778 trna Trnad-guc transfer RNA aspartic acid (anticodon GUC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978829 AGCD01005333;AGCD01005375;AGCD01023470;AGCD01049456;AGCD01050593;AGCD01051466;AGCD01057309 MODEL 8743980 protein-coding Ephx1 epoxide hydrolase 1 ENCODES a protein that exhibits cis-stilbene-oxide hydrolase activity (ortholog); enzyme binding (ortholog); epoxide hydrolase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cellular response to glucocorticoid stimulus (ortholog); diol biosynthetic process (ortholog); PARTICIPATES IN carbamazepine pharmacokinetics pathway; phenytoin pharmacodynamics pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN membrane (ortholog) NW_004955520 116363 142983 - 102004192 AGCD01068006;AGCD01068007;AGCD01068008;GBBH01000987;GBDI01022276;XM_013507052 XP_013362506 MODEL 8977831 pseudo LOC102018290 transmembrane protein 87B pseudogene NW_004955419 60235 292357 + 102018290 AGCD01019561;AGCD01019562;AGCD01019563;AGCD01019564;AGCD01019565;AGCD01019566;AGCD01019567;AGCD01019568;AGCD01019569;AGCD01019570;AGCD01019571 MODEL 8806420 protein-coding Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); talin binding (ortholog); INVOLVED IN axonogenesis (ortholog); phosphatidylinositol biosynthetic process (ortholog); phosphatidylinositol metabolic process (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; E-cadherin signaling pathway; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endomembrane system (ortholog) NW_004955495 5573549 5616957 - 102006681 AGCD01062014;AGCD01062015;GBDI01125804;XM_005405880;XM_013505222;XM_013505223;XM_013505224;XM_013505225 XP_005405937;XP_013360676;XP_013360677;XP_013360678;XP_013360679 MODEL 9031211 protein-coding Prkag1 protein kinase AMP-activated non-catalytic subunit gamma 1 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); AMP-activated protein kinase activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); regulation of catalytic activity (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; FOUND IN nucleotide-activated protein kinase complex (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955500 7834550 7850412 - 102013849 AGCD01063952;AGCD01063953;AGCD01063954;GBDK01126945;XM_005406688;XM_013505682;XM_013505684;XM_013505685 XP_005406745;XP_013361136;XP_013361138;XP_013361139 MODEL 8814575 protein-coding Srgap1 SLIT-ROBO Rho GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cell migration (ortholog); Rho protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Brain Hypoxia-Ischemia (ortholog) NW_004955458 10842745 10991500 + 102019672 AGCD01047707;AGCD01047708;AGCD01047709;AGCD01047710;AGCD01047711;GBDK01433747;XM_013520989;XM_013520990 XP_013376443;XP_013376444 MODEL 8933063 protein-coding Traf6 TNF receptor associated factor 6 ENCODES a protein that exhibits histone deacetylase binding (ortholog); identical protein binding (ortholog); protein kinase B binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); antiviral innate immune response (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955422 9925765 9950354 + 102004940 AGCD01022725;AGCD01022726;GBBH01094516;GBDF01224038;XM_005384105 XP_005384162 MODEL 8699556 protein-coding Ephx2 epoxide hydrolase 2 ENCODES a protein that exhibits 10-hydroxy-9-(phosphonooxy)octadecanoate phosphatase activity (ortholog); epoxide hydrolase activity (ortholog); lipid phosphatase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); epoxide metabolic process (ortholog); linoleic acid metabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); atherosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); peroxisome (ortholog) NW_004955403 49999563 50038800 + 102005434 AGCD01002954;AGCD01002955;GBBH01062366;XM_005373744 XP_005373801 MODEL 39134513 ribozyme RNaseP_nuc Nuclear RNase P 8714840 protein-coding Timm50 translocase of inner mitochondrial membrane 50 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity (ortholog); interleukin-2 receptor binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN mitochondrial membrane organization (ortholog); protein import into mitochondrial matrix (ortholog); release of cytochrome c from mitochondria (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH 3-methylglutaconic aciduria type 9 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); mitochondrial inner membrane (ortholog) NW_004955468 85681 94300 - 102020644 AGCD01051681;GBDF01010510;XM_005399767 XP_005399824 MODEL 8752160 protein-coding LOC102004099 olfactory receptor 8K5-like NW_004955511 1397789 1398727 + 102004099 AGCD01066366;XM_005407960 XP_005408017 MODEL 8863979 protein-coding LOC102011696 butyrophilin-like protein 8 NW_004955530 347486 352064 - 102011696 AGCD01069846;GBDF01142616;XM_013507548 XP_013363002 MODEL 8987617 protein-coding Seh1l SEH1 like nucleoporin INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN GATOR2 complex (ortholog); kinetochore (ortholog); lysosomal membrane (ortholog) NW_004955402 679109 698624 - 102010537 AGCD01000028;AGCD01000029;GBBH01139869;GBCB01023252;XM_013512934 XP_013368388 MODEL 9066139 protein-coding Ranbp6 RAN binding protein 6 ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN mitochondrion (ortholog); synapse (ortholog) NW_004955434 9995734 9999194 - 102005836 AGCD01032317;GBBH01071300;XM_005388668;XM_005388670 XP_005388725;XP_005388727 MODEL 8967147 protein-coding Rreb1 ras responsive element binding protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of brown fat cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); cervical cancer (ortholog); FOUND IN nuclear speck (ortholog) NW_004955465 6572593 6757423 - 102030398 AGCD01050445;AGCD01050446;AGCD01050447;AGCD01050448;GBDJ01141847;XM_005398860;XM_005398862;XM_005398863;XM_005398865;XM_005398868;XM_013521815;XM_013521816;XM_013521817;XM_013521818;XM_013521819 XP_005398917;XP_005398919;XP_005398920;XP_005398922;XP_005398925;XP_013377269;XP_013377270;XP_013377271;XP_013377272;XP_013377273 MODEL 8820365 ncrna LOC102010095 uncharacterized LOC102010095 NW_004955440 18493660 18495295 + 102010095 AGCD01036610;GBDF01126738;XR_001235248 MODEL 8960367 protein-coding LOC102004867 DCN1-like protein 1 NW_004955447 9722702 9793618 + 102004867 AGCD01040866;XM_013518479 XP_013373933 MODEL 730469235 snorna SNORA17 Small nucleolar RNA SNORA17 730469116 snrna U11 U11 spliceosomal RNA 9055277 ncrna LOC102019846 uncharacterized LOC102019846 NW_004955437 21463277 21471941 - 102019846 AGCD01034907;AGCD01034908;GBCE01092338;XR_001235015;XR_001235016;XR_261900 MODEL 8810433 protein-coding Rbsn rabenosyn, RAB effector ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); small GTPase binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); Golgi to lysosome transport (ortholog); regulation of Golgi organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog) NW_004955429 17444031 17468024 - 102009526 AGCD01028857;GBCB01108995;XM_005387075;XM_005387076;XM_005387077;XM_013515390;XM_013515391;XR_001234494 XP_005387132;XP_005387133;XP_005387134;XP_013370844;XP_013370845 MODEL 39133452 snorna SNORD58 Small nucleolar RNA SNORD58 41410897 snorna SNORA52 Small nucleolar RNA SNORA52 9048342 protein-coding LOC102003076 EKC/KEOPS complex subunit LAGE3-like NW_004955585 16414 18078 + 102003076 AGCD01075989;AGCD01075990;GBDF01011008;XM_005414424;XM_005414425 XP_005414481;XP_005414482 MODEL 39133191 snrna U4 U4 spliceosomal RNA 8761351 protein-coding Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); AMP-activated protein kinase activity (ortholog); INVOLVED IN glycogen metabolic process (ortholog); intracellular signal transduction (ortholog); regulation of catalytic activity (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cardiac arrest (ortholog); FOUND IN nucleotide-activated protein kinase complex (ortholog) NW_004955491 5852534 6048820 - 102009726 AGCD01060506;AGCD01060507;AGCD01060508;AGCD01060509;AGCD01060510;AGCD01060511;AGCD01060512;AGCD01060513;GBDF01120908;XM_013504627 XP_013360081 MODEL 8809712 protein-coding Sfmbt2 Scm like with four mbt domains 2 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 23691648 23913781 - 102006670 AGCD01022193;AGCD01022194;AGCD01022195;AGCD01022196;AGCD01022197;AGCD01022198;AGCD01022199;GBDI01384258;XM_005383870;XM_005383871;XM_013513767;XM_013513768;XM_013513769;XM_013513771;XM_013513772;XM_013513773 XP_005383927;XP_005383928;XP_013369221;XP_013369222;XP_013369223;XP_013369225;XP_013369226;XP_013369227 MODEL 8885480 protein-coding LOC102008182 glutathione S-transferase theta-1-like NW_004955455 8317663 8323287 - 102008182 AGCD01045886;GBBH01177305;XM_005396408 XP_005396465 MODEL 10167159 ncrna LOC106147448 uncharacterized LOC106147448 NW_004955561 964179 968551 - 106147448 AGCD01073827;GBDF01000293;XR_001232355 MODEL 8989104 ncrna LOC102008922 uncharacterized LOC102008922 NW_004955460 11145349 11152507 + 102008922 AGCD01048629;AGCD01048630;GBCQ01032294;XR_001236540 MODEL 8974669 pseudo LOC102007388 pre-mRNA-splicing factor RBM22 pseudogene NW_004955402 42301725 42303062 - 102007388 AGCD01001038 MODEL 8794937 protein-coding Slc35c2 solute carrier family 35 member C2 INVOLVED IN negative regulation of gene expression (ortholog); positive regulation of Notch signaling pathway (ortholog); protein O-linked glycosylation via fucose (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) NW_004955445 10984675 10996707 + 102019861 AGCD01039680;GBDF01155404;XM_005392381;XM_005392383;XM_013518297;XM_013518298;XM_013518299;XM_013518300;XM_013518301;XM_013518302 XP_005392438;XP_005392440;XP_013373751;XP_013373752;XP_013373753;XP_013373754;XP_013373755;XP_013373756 MODEL 40834593 protein-coding C11orf80 chromosome 11 open reading frame 80 8942609 ncrna LOC102012071 uncharacterized LOC102012071 NW_004955463 1330958 1377220 - 102012071 AGCD01049509;AGCD01049510;AGCD01049511;AGCD01049512;GBDF01208723;XR_263140 MODEL 39133738 snorna SNORA84 Small nucleolar RNA SNORA84 8953266 protein-coding Snx25 sorting nexin 25 ENCODES a protein that exhibits type I transforming growth factor beta receptor binding (ortholog); INVOLVED IN negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); receptor catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endosome (ortholog) NW_004955403 23678301 23787256 - 102028603 AGCD01002250;AGCD01002251;AGCD01002252;AGCD01002253;AGCD01002254;GBDK01250049;XM_005373470;XM_013512963;XM_013512965 XP_005373527;XP_013368417;XP_013368419 MODEL 616940628 snorna SNORA4 Small nucleolar RNA SNORA4 8709435 protein-coding Pole DNA polymerase epsilon, catalytic subunit ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN base-excision repair, gap-filling (ortholog); DNA biosynthetic process (ortholog); DNA replication (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); anemia (ortholog); FOUND IN epsilon DNA polymerase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955482 373467 418000 + 102019698 AGCD01057171;AGCD01057172;GBDF01088484;XM_005402950;XM_005402952;XM_013503642;XM_013503643 XP_005403007;XP_005403009;XP_013359096;XP_013359097 MODEL 9027756 pseudo LOC102013284 histone deacetylase 1 pseudogene NW_004955474 8472117 8474602 + 102013284 AGCD01054554 MODEL 8844120 pseudo LOC102016340 60S ribosomal protein L17 pseudogene NW_004955405 7570200 7570661 + 102016340 AGCD01004720 MODEL 8761382 ncrna LOC102011240 uncharacterized LOC102011240 NW_004955435 21229107 21260847 + 102011240 AGCD01033474;GBDI01025489;XR_001234872;XR_261731;XR_261732 MODEL 10236597 ncrna LOC106150344 uncharacterized LOC106150344 NW_004955472 12739492 12743856 + 106150344 AGCD01053814;GBDJ01139285;XR_001237105 MODEL 8846032 protein-coding Timm8a translocase of inner mitochondrial membrane 8A ENCODES a protein that exhibits identical protein binding (ortholog); zinc ion binding (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); protein localization to mitochondrion (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH Animal Disease Models (ortholog); Auditory Neuropathy (ortholog); deafness-dystonia-optic neuronopathy syndrome (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog); mitochondrion (ortholog) NW_004955503 7480075 7483218 - 102025707 AGCD01064794;GBCE01065783;XM_005406950 XP_005407007 MODEL 8856663 protein-coding LOC102004101 olfactory receptor 5D18-like NW_004955511 575528 576477 - 102004101 AGCD01066333;XM_013506420 XP_013361874 MODEL 8726626 protein-coding Ptn pleiotrophin ENCODES a protein that exhibits carbohydrate binding (ortholog); chondroitin sulfate binding (ortholog); chondroitin sulfate proteoglycan binding (ortholog); INVOLVED IN bone mineralization (ortholog); cellular response to D-galactosamine (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH adrenal carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Body Weight (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); endoplasmic reticulum (ortholog) NW_004955494 5580264 5681848 + 102006927 AGCD01061522;AGCD01061523;GBCE01001843;XM_013505031;XM_013505032 XP_013360485;XP_013360486 MODEL 150537103 snorna SNORA53 Small nucleolar RNA SNORA53 8901865 protein-coding Plekhh1 pleckstrin homology, MyTH4 and FERM domain containing H1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) NW_004955466 2616627 2653804 - 102014029 AGCD01050750;AGCD01050751;GBDJ01316571;XM_013521892 XP_013377346 MODEL 8799359 pseudo LOC102022375 putative olfactory receptor 10D4 NW_004955412 24725544 24726480 + 102022375 AGCD01013124 MODEL 8742361 protein-coding Rgs2 regulator of G protein signaling 2 ENCODES a protein that exhibits adenylate cyclase inhibitor activity (ortholog); beta-tubulin binding (ortholog); G-protein alpha-subunit binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); maternal process involved in female pregnancy (ortholog); negative regulation of cardiac muscle hypertrophy (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; angiotensin II signaling pathway via AT1 receptor; calcium signaling pathway via the calcium-sensing receptor; ASSOCIATED WITH acute myeloid leukemia (ortholog); bladder disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955406 30261757 30265389 + 102018685 AGCD01006363;GBBH01140341;XM_005375101 XP_005375158 MODEL 8930496 protein-coding LOC102005547 breast cancer type 1 susceptibility protein homolog NW_004956027 800 5983 - 102005547 AGCD01078904;GBBH01191619;GBCQ01157973;XM_005415162 XP_005415219 MODEL 8982833 protein-coding Ppox protoporphyrinogen oxidase ENCODES a protein that exhibits protoporphyrinogen oxidase activity, oxygen as acceptor (ortholog); INVOLVED IN heme A biosynthetic process (ortholog); heme B biosynthetic process (ortholog); heme biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH acute intermittent porphyria (ortholog); acute porphyria (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial membrane (ortholog) NW_004955468 12930387 12934437 + 102004053 AGCD01052192;AGCD01052193;GBDF01155905;XM_005400257;XM_013522352 XP_005400314;XP_013377806 MODEL 8993925 trna Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955568;NW_004955418;NW_004955445;NW_004955465 63038;29926685;16045097;13921469 63109;29926756;16045169;13921540 -;+;+;+ 101978831 AGCD01019491;AGCD01039863;AGCD01050636;AGCD01074502 MODEL 8752588 ncrna LOC102018291 uncharacterized LOC102018291 NW_004955420 9727856 9731176 + 102018291 AGCD01020761;GBDF01025460;XR_001233744;XR_260688 MODEL 9017489 protein-coding LOC102004870 BMP-binding endothelial regulator protein NW_004955582 926239 1169313 + 102004870 AGCD01075777;AGCD01075778;AGCD01075779;AGCD01075780;AGCD01075781;AGCD01075782;AGCD01075783;AGCD01075784;AGCD01075785;GBCE01159927;GBCE01159930;XM_005414284 XP_005414341 MODEL 8997551 protein-coding Pip5kl1 phosphatidylinositol-4-phosphate 5-kinase like 1 ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of mitochondrial membrane potential (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955419 745400 753819 + 102021661 AGCD01019608;GBCE01103174;XM_005382394;XM_013513157;XM_013513158;XM_013513159;XM_013513160;XM_013513161 XP_005382451;XP_013368611;XP_013368612;XP_013368613;XP_013368614;XP_013368615 MODEL 8876955 protein-coding Phf1 PHD finger protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K36me3 reader activity (ortholog); histone H3K4me3 reader activity (ortholog); INVOLVED IN DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog); ESC/E(Z) complex (ortholog); nucleoplasm (ortholog) NW_004955437 1943049 1947027 + 102005174 AGCD01034245;GBCE01032712;GBDF01089862;XM_013517021 XP_013372475 MODEL 8716564 ncrna LOC102005912 uncharacterized LOC102005912 NW_004955412 3097642 3103353 - 102005912 AGCD01012565;GBDF01016512;XR_001232865;XR_001232866;XR_001232867 MODEL 8853043 pseudo LOC102019847 monocyte to macrophage differentiation factor pseudogene NW_004955539 816214 816756 - 102019847 AGCD01071193 MODEL 8970189 protein-coding Ephx3 epoxide hydrolase 3 ENCODES a protein that exhibits epoxide hydrolase activity (ortholog); INVOLVED IN epoxide metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN membrane (ortholog) NW_004955495 7995979 8001423 + 102009853 AGCD01062174;GBDK01360091;XM_005406086;XM_013505126;XM_013505127 XP_005406143;XP_013360580;XP_013360581 MODEL 9003178 protein-coding Srgap2 SLIT-ROBO Rho GTPase activating protein 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin filament severing (ortholog); dendritic spine development (ortholog); excitatory synapse assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); intellectual disability (ortholog); myoclonic-atonic epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendritic spine (ortholog) NW_004955406 41801235 42050731 + 102017302 AGCD01006692;AGCD01006693;AGCD01006694;AGCD01006695;AGCD01006696;GBDF01159814;XM_005375386 XP_005375443 MODEL 8822652 protein-coding Wdr18 WD repeat domain 18 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 6869543 6877058 - 102014147 AGCD01062099;GBCQ01121381;XM_005406002 XP_005406059 MODEL 39134514 ribozyme RNaseP_nuc Nuclear RNase P 9050197 protein-coding Traf7 TNF receptor associated factor 7 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to interleukin-6 (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenomatoid tumor (ortholog); Apnea (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955442 15092955 15112842 - 102030352 AGCD01037859;GBDJ01229191;XM_005391453;XM_013517736;XM_013517737;XM_013517738;XM_013517739 XP_005391510;XP_013373190;XP_013373191;XP_013373192;XP_013373193 MODEL 8792967 protein-coding LOC102006248 olfactory receptor 1B1 NW_004955419 5318963 5319916 - 102006248 AGCD01019801;XM_005382524 XP_005382581 MODEL 8900039 pseudo LOC102011704 CCA tRNA nucleotidyltransferase 1, mitochondrial-like NW_004955444 8744286 8760868 + 102011704 AGCD01038945 MODEL 8716117 pseudo LOC102008549 nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 pseudogene NW_004955495 3015938 3016703 + 102008549 AGCD01061815 MODEL 8918766 protein-coding Spc25 SPC25 component of NDC80 kinetochore complex INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); chromosome segregation (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); kinetochore (ortholog); Ndc80 complex (ortholog) NW_004955449 5533464 5556341 + 102004764 AGCD01041939;AGCD01041940;AGCD01041941;GBDJ01093547;XM_005393272;XM_005393273;XM_013518795 XP_005393329;XP_005393330;XP_013374249 MODEL 8724293 protein-coding Sfn stratifin ENCODES a protein that exhibits identical protein binding (ortholog); phosphoprotein binding (ortholog); phosphoserine residue binding (ortholog); INVOLVED IN cAMP/PKA signal transduction (ortholog); establishment of skin barrier (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH endometrial carcinoma (ortholog); Esophageal Neoplasms (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955452 6217519 6218481 + 102024419 AGCD01044097;GBDJ01006661;XM_005394883 XP_005394940 MODEL 730469237 snorna SNORA17 Small nucleolar RNA SNORA17 8720611 pseudo LOC102019496 60S ribosomal protein L7a pseudogene NW_004955414 25104299 25108383 + 102019496 AGCD01015573;AGCD01015574 MODEL 8722402 protein-coding Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 ENCODES a protein that exhibits AMP-activated protein kinase activity (ortholog); protein kinase binding (ortholog); protein kinase regulator activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); negative regulation of glycogen biosynthetic process (ortholog); regulation of glycolytic process (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH carbohydrate metabolic disorder (ortholog); lipid metabolism disorder (ortholog); uterine carcinosarcoma (ortholog); FOUND IN nucleotide-activated protein kinase complex (ortholog) NW_004955453 14584405 14594112 + 102003940 AGCD01044871;GBDF01176866;XM_005395623;XM_005395624;XM_005395625;XM_005395626;XM_013519792;XM_013519793;XM_013519794;XM_013519795 XP_005395680;XP_005395681;XP_005395682;XP_005395683;XP_013375246;XP_013375247;XP_013375248;XP_013375249 MODEL 10235051 protein-coding LOC106147449 cell death activator CIDE-3-like NW_004955561 1371052 1373545 - 106147449 AGCD01073852;GBDJ01009119;XM_013509093 XP_013364547 MODEL 730469240 snorna SNORA53 Small nucleolar RNA SNORA53 8997274 protein-coding LOC102010097 keratin, type II cytoskeletal 6A-like NW_004955547 2793016 2797170 - 102010097 AGCD01072294;XM_013508500 XP_013363954 MODEL 8980969 protein-coding Slc35d1 solute carrier family 35 member D1 ENCODES a protein that exhibits antiporter activity (ortholog); pyrimidine nucleotide-sugar transmembrane transporter activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); embryonic skeletal system development (ortholog); pyrimidine nucleotide-sugar transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2H (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955423 23945729 23969929 + 102016614 AGCD01024026;AGCD01024027;GBBH01050955;GBCE01009175;XM_005385278;XM_013514495 XP_005385335;XP_013369949 MODEL 8902258 protein-coding Rpap1 RNA polymerase II associated protein 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955416 8322239 8348331 - 102008094 AGCD01017043;AGCD01017044;GBBH01051570;XM_005381286 XP_005381343 MODEL 39133451 snorna SNORD58 Small nucleolar RNA SNORD58 8792465 protein-coding Rbx1 ring-box 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); molecular adaptor activity (ortholog); NEDD8 ligase activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to oxidative stress (ortholog); cellular response to UV (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; neddylation pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog) NW_004955413 26579759 26592980 + 102015096 AGCD01014453;AGCD01014454;GBDF01008494;XM_005379338 XP_005379395 MODEL 9046146 ncrna LOC102016341 uncharacterized LOC102016341 NW_004955453 7778423 7824063 - 102016341 AGCD01044753;GBDF01155610;XR_262717;XR_262718 MODEL 39133086 snrna U4 U4 spliceosomal RNA 8904583 protein-coding Prss54 serine protease 54 ASSOCIATED WITH acute myeloid leukemia (ortholog) NW_004955433 15775492 15788128 - 102011233 AGCD01031765;GBDF01046812;XM_013516274 XP_013371728 MODEL 8814745 protein-coding Rrh retinal pigment epithelium-derived rhodopsin homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lymphoma (ortholog) NW_004955496 460094 473007 - 102028554 AGCD01062228;XM_005406281 XP_005406338 MODEL 8926598 gene LOC102008184 Ig lambda-2 chain V region-like NW_004955455 6522852 6523304 + 102008184 AGCD01045801;XM_005396573 MODEL 8815701 ncrna LOC102010866 uncharacterized LOC102010866 NW_004955454 15132762 15145904 + 102010866 AGCD01045485;AGCD01045486;GBDF01016961;XR_001236261;XR_001236262 MODEL 8713916 protein-coding Trafd1 TRAF-type zinc finger domain containing 1 INVOLVED IN negative regulation of innate immune response (ortholog); response to cytokine (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955482 8693323 8710226 + 102007771 AGCD01057549;AGCD01057550;GBCB01077429;GBDF01048404;XM_005403189 XP_005403246 MODEL 8719759 protein-coding LOC102007390 EKC/KEOPS complex subunit LAGE3-like NW_004955595 891199 900679 + 102007390 AGCD01076488;AGCD01076489;AGCD01076490;GBDK01408734;XM_005414678 XP_005414735 MODEL 9048878 protein-coding Sfpq splicing factor proline and glutamine rich ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); alternative mRNA splicing, via spliceosome (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear matrix (ortholog) NW_004955452 13267968 13283823 - 102022877 AGCD01044397;AGCD01044398;GBBH01000997;GBCQ01037138;XM_005395311 XP_005395368 MODEL 8924950 ncrna LOC102012073 uncharacterized LOC102012073 NW_004955464 5894847 5895631 - 102012073 AGCD01050015;GBDF01046163;XR_001236693;XR_263202;XR_263203 MODEL 8790788 ncrna LOC102022380 uncharacterized LOC102022380 NW_004955471 5650960 5654958 + 102022380 AGCD01053108;GBDF01013412;XR_263524 MODEL 8926075 protein-coding LOC102005548 cytochrome P450 2D6-like NW_004957079 5 1733 + 102005548 AGCD01080475;GBDI01036375;XM_013510243 XP_013365697 MODEL 8742146 pseudo LOC102013288 T-cell activation inhibitor, mitochondrial-like NW_004955415 31054123 31073082 + 102013288 AGCD01016669 MODEL 8881058 protein-coding LOC102003080 interleukin-1 receptor type 1-like NW_004955756 6773 24480 + 102003080 AGCD01078281;GBCB01092471;GBDK01182668;XM_005415091 XP_005415148 MODEL 730469411 snorna SNORA54 Small nucleolar RNA SNORA54 9039610 protein-coding LOC102011242 triggering receptor expressed on myeloid cells 1 NW_004955437 7849199 7863437 - 102011242 AGCD01034469;AGCD01034470;GBDJ01061958;XM_005389685;XM_013517118 XP_005389742;XP_013372572 MODEL 8751044 protein-coding Ranbp9 RAN binding protein 9 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of amyloid precursor protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955465 1042649 1122824 + 102010784 AGCD01050330;AGCD01050331;GBBH01102333;GBDF01003318;XM_005398797 XP_005398854 MODEL 8792106 pseudo LOC102019848 40S ribosomal protein S23 pseudogene NW_004955438 13818383 13818826 + 102019848 AGCD01035313 MODEL 8801756 protein-coding Wdr19 WD repeat domain 19 ENCODES a protein that exhibits protein carrier activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); cilium assembly (ortholog); digestive system development (ortholog); ASSOCIATED WITH acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN cilium (ortholog); intraciliary transport particle A (ortholog); motile cilium (ortholog) NW_004955443 8053847 8122918 - 102028692 AGCD01038308;AGCD01038309;AGCD01038310;GBCQ01123355;XM_005391986 XP_005392043 MODEL 10215760 pseudo LOC106150345 ATP-dependent RNA helicase DDX18 pseudogene NW_004955473 5522962 5525460 - 106150345 AGCD01053979 MODEL 39132713 snrna U4 U4 spliceosomal RNA 39131578 protein-coding C11orf96 chromosome 11 open reading frame 96 9044240 protein-coding LOC102004103 EF-hand calcium-binding domain-containing protein 1-like NW_004955432 9467793 9483554 - 102004103 AGCD01030906;GBDK01028185;XM_005388019;XM_013515941 XP_005388076;XP_013371395 MODEL 8799538 protein-coding Timm8b translocase of inner mitochondrial membrane 8 homolog B PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955412 13766532 13768453 - 102026956 AGCD01012845;GBDF01002080;XM_005378108 XP_005378165 MODEL 8721581 protein-coding Ptov1 PTOV1 extended AT-hook containing adaptor protein ASSOCIATED WITH cervical cancer (ortholog); Disease Progression (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955559 1070856 1079052 - 102029454 AGCD01073628;AGCD01073629;GBDK01007823;GBDK01196056;XM_013508969 XP_013364423 MODEL 8866233 protein-coding Rgs20 regulator of G protein signaling 20 INVOLVED IN response to amphetamine (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); trans-Golgi network (ortholog) NW_004955454 13271409 13305730 + 102005338 AGCD01045432;GBDK01335709;XM_005396066 XP_005396123 MODEL 730469038 snorna SNORA9 Small nucleolar RNA SNORA9 8699520 trna Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955518;NW_004955533;NW_004955404;NW_004955468;NW_004955467 2739880;3278389;51044487;13117506;8514521 2739951;3278460;51044558;13117577;8514592 -;+;-;+;+ 101978830 AGCD01004542;AGCD01051452;AGCD01052199;AGCD01067784;AGCD01070411 MODEL 8951158 pseudo LOC102004873 60S ribosomal protein L7-like 1 pseudogene NW_004955402 41521289 41522029 + 102004873 AGCD01001016 MODEL 8768272 ncrna LOC102005913 uncharacterized LOC102005913 NW_004955465 7025399 7028146 - 102005913 AGCD01050450;GBCQ01175139;XR_001236763;XR_263247 MODEL 39133449 snorna SNORD58 Small nucleolar RNA SNORD58 8991305 protein-coding Sfr1 SWI5 dependent homologous recombination repair protein 1 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); double-strand break repair via homologous recombination (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); stomach cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955485 6520747 6525359 - 102026429 AGCD01058621;GBDK01153601;XM_005403788;XM_005403789;XM_005403790;XM_005403791;XM_013504071;XM_013504072 XP_005403845;XP_005403846;XP_005403847;XP_005403848;XP_013359525;XP_013359526 MODEL 8981930 protein-coding Phf10 PHD finger protein 10 INVOLVED IN embryonic brain development (ortholog); nervous system development (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN npBAF complex (ortholog); nucleoplasm (ortholog) NW_004955411 3911966 3926995 + 102020540 AGCD01011562;GBCB01002453;GBCB01043927;XM_005377636 XP_005377693 MODEL 8767798 protein-coding Pipox pipecolic acid and sarcosine oxidase ENCODES a protein that exhibits L-pipecolate oxidase activity (ortholog); sarcosine oxidase activity (ortholog); INVOLVED IN amino acid catabolic process (ortholog); L-lysine catabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; glutaric aciduria type I pathway; hyperlysinemia pathway; ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); peroxisomal disease (ortholog); FOUND IN peroxisomal matrix (ortholog); peroxisome (ortholog) NW_004955481 4128503 4225027 - 102015954 AGCD01056931;AGCD01056932;GBDI01245274;XM_005402697;XM_013503421;XM_013503422 XP_005402754;XP_013358875;XP_013358876 MODEL 730469128 snrna U11 U11 spliceosomal RNA 8878592 ncrna LOC102008924 uncharacterized LOC102008924 NW_004955410 24913016 24966433 + 102008924 AGCD01011136;GBDK01310034;XR_259862 MODEL 8822491 ncrna LOC102008554 uncharacterized LOC102008554 NW_004955425 10486431 10493561 + 102008554 AGCD01025446;GBDF01209722;XR_261137 MODEL 8936061 protein-coding Spcs1 signal peptidase complex subunit 1 ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN protein processing (ortholog); viral protein processing (ortholog); virion assembly (ortholog); PARTICIPATES IN biotin metabolic pathway; biotinidase deficiency pathway; holocarboxylase synthetase deficiency pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); signal peptidase complex (ortholog) NW_004955430 2689927 2692119 + 102025148 AGCD01029176;GBDF01145772;XM_005387349;XM_005387350 XP_005387406;XP_005387407 MODEL 8722519 protein-coding Rc3h1 ring finger and CCCH-type domains 1 ENCODES a protein that exhibits CCR4-NOT complex binding (ortholog); double-stranded RNA binding (ortholog); miRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); B cell homeostasis (ortholog); lymph node development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955406 14053122 14123023 - 102010666 AGCD01005956;AGCD01005957;GBCB01000291;XM_005374881;XM_005374883 XP_005374938;XP_005374940 MODEL 8748015 protein-coding Sel1l SEL1L adaptor subunit of SYVN1 ubiquitin ligase ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN ERAD pathway (ortholog); protein secretion (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebellar ataxia (ortholog); FOUND IN Derlin-1 retrotranslocation complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955438 5030915 5082015 - 102027339 AGCD01035057;GBCC01026837;XM_005390240 XP_005390297 MODEL 8713164 protein-coding Prss56 serine protease 56 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN camera-type eye development (ortholog); proteolysis (ortholog); ASSOCIATED WITH angle-closure glaucoma (ortholog); cholangiocarcinoma (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955453 3440871 3446090 - 102005105 AGCD01044658;AGCD01044659;GBBH01030283;GBBH01042828;XM_013519998 XP_013375452 MODEL 8932881 protein-coding Plekhh2 pleckstrin homology, MyTH4 and FERM domain containing H2 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN negative regulation of actin filament depolymerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); lamellipodium (ortholog) NW_004955441 10818982 10921224 + 102025179 AGCD01037094;AGCD01037095;GBDF01083557;XM_005390924;XM_005390925;XM_005390927;XM_005390928;XM_005390929;XM_005390930;XM_005390931;XM_005390932;XM_005390933;XM_013517541;XR_262069 XP_005390981;XP_005390982;XP_005390984;XP_005390985;XP_005390986;XP_005390987;XP_005390988;XP_005390989;XP_005390990;XP_013372995 MODEL 8860154 protein-coding Rrm1 ribonucleotide reductase catalytic subunit M1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); identical protein binding (ortholog); purine nucleotide binding (ortholog); INVOLVED IN 2'-deoxyribonucleotide biosynthetic process (ortholog); cell proliferation in forebrain (ortholog); deoxyribonucleotide biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); Animal Disease Models (ortholog); autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 6 (ortholog); FOUND IN cell projection (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955414 19850523 19904879 + 102012526 AGCD01015339;AGCD01015340;AGCD01015341;GBBH01011845;XM_005380041 XP_005380098 MODEL 8944367 protein-coding Pole2 DNA polymerase epsilon 2, accessory subunit INVOLVED IN DNA-templated DNA replication (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN epsilon DNA polymerase complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955409 12983488 13014669 + 102029717 AGCD01009585;AGCD01009586;GBBH01205801;GBDF01081361;XM_013510466 XP_013365920 MODEL 8839223 protein-coding Ppp1ca protein phosphatase 1 catalytic subunit alpha ENCODES a protein that exhibits cadherin binding involved in cell-cell adhesion (ortholog); iron ion binding (ortholog); phosphatase activity (ortholog); INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); circadian regulation of gene expression (ortholog); entrainment of circadian clock by photoperiod (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; Bone morphogenetic proteins signaling pathway; dopamine signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); congestive heart failure (ortholog); dilated cardiomyopathy (ortholog); FOUND IN adherens junction (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955422 18076670 18079859 + 102022506 AGCD01022936;GBDF01050912;XM_005384345 XP_005384402 MODEL 730469257 snorna SNORA40 Small nucleolar RNA SNORA40 8934593 pseudo LOC102007392 aldose reductase-related protein 2 pseudogene NW_004955450 13309903 13310837 + 102007392 AGCD01042733 MODEL 8919876 ncrna LOC102018298 uncharacterized LOC102018298 NW_004955494 7683032 7765368 - 102018298 AGCD01061554;AGCD01061555;GBCC01029716;XR_264118 MODEL 8731910 protein-coding Ephx4 epoxide hydrolase 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955423 2389745 2425036 - 102026760 AGCD01023472;GBDJ01093449;XM_005385060 XP_005385117 MODEL 9032987 ncrna LOC102010099 uncharacterized LOC102010099 NW_004955558 861760 862614 + 102010099 AGCD01073396;GBDJ01283073;XR_001232330 MODEL 8958004 pseudo LOC102013293 60S ribosomal protein L12-like NW_004955418 2871913 2872420 + 102013293 AGCD01018776 MODEL 8757412 ncrna LOC102011707 uncharacterized LOC102011707 NW_004955446 1115766 1138545 - 102011707 AGCD01039953;GBDF01181940;XR_262364 MODEL 9058436 protein-coding LOC102006251 olfactory receptor 13C3-like NW_004955419 21880670 21881698 + 102006251 AGCD01020289;XM_013513142 XP_013368596 MODEL 8832465 ncrna LOC102016342 uncharacterized LOC102016342 NW_004955453 15162871 15192421 - 102016342 AGCD01044886;GBDF01074770;XR_262743;XR_262744 MODEL 8780240 ncrna LOC102019849 uncharacterized LOC102019849 NW_004955542 1288537 1297016 - 102019849 AGCD01071501;GBDF01143441;XR_264851 MODEL 730469238 snorna SNORA17 Small nucleolar RNA SNORA17 8872805 pseudo LOC102008185 ATP-dependent RNA helicase DDX3X-like NW_004955407 21081761 21090500 + 102008185 AGCD01007350 MODEL 8964150 pseudo LOC102010868 transformer-2 protein homolog alpha pseudogene NW_004955406 19929201 19930073 - 102010868 AGCD01006095 MODEL 8919893 protein-coding Traip TRAF interacting protein ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of interferon-beta production (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Dwarfism (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955532 1725608 1746690 - 102020483 AGCD01070200;GBDF01236147;XM_005410226 XP_005410283 MODEL 8958879 protein-coding Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha ENCODES a protein that exhibits cAMP binding (ortholog); cAMP-dependent protein kinase inhibitor activity (ortholog); cAMP-dependent protein kinase regulator activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cardiac muscle cell proliferation (ortholog); cellular response to glucagon stimulus (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acrodysostosis (ortholog); Acrodysostosis 1, with or without Hormone Resistance (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN axoneme (ortholog); cAMP-dependent protein kinase complex (ortholog); centrosome (ortholog) NW_004955478 4241283 4262119 - 102026746 AGCD01055845;GBDI01009060;GBDJ01090068;XM_005402117 XP_005402174 MODEL 8897517 protein-coding Ptp4a1 protein tyrosine phosphatase 4A1 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); early endosome (ortholog) NW_004955502 322827 329226 - 102023377 AGCD01064234;GBDK01070331;XM_005406875 XP_005406932 MODEL 8893523 pseudo LOC102005551 40S ribosomal protein S3a-like NW_004955451 2638931 2646792 + 102005551 AGCD01043017 MODEL 8889247 pseudo LOC102022383 cytochrome c oxidase subunit 7A2, mitochondrial pseudogene NW_004955414 28884771 28926524 + 102022383 AGCD01015691;AGCD01015692;AGCD01015693;AGCD01015694;AGCD01015695;AGCD01015696;AGCD01015697 MODEL 8944025 ncrna LOC102012074 uncharacterized LOC102012074 NW_004955411 18978377 19015927 - 102012074 AGCD01012029;AGCD01012030;GBDF01115149;XR_259938 MODEL 8747419 protein-coding LOC102003083 zinc finger and SCAN domain-containing protein 4-like NW_004956963 711 1829 + 102003083 AGCD01080359;XM_013510241 XP_013365695 MODEL 39134515 ribozyme RNaseP_nuc Nuclear RNase P 730469297 snorna SNORA54 Small nucleolar RNA SNORA54 8705403 protein-coding Rpap2 RNA polymerase II associated protein 2 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN PERK-mediated unfolded protein response (ortholog); snRNA transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955423 2062163 2195351 - 102022401 AGCD01023467;AGCD01023468;AGCD01023469;AGCD01023470;GBDF01220283;XM_005385045;XM_013514463;XM_013514464;XM_013514465;XM_013514466;XM_013514467;XM_013514468;XM_013514469;XR_001234092;XR_001234093;XR_001234094 XP_005385102;XP_013369917;XP_013369918;XP_013369919;XP_013369920;XP_013369921;XP_013369922;XP_013369923 MODEL 9015459 protein-coding Srgap3 SLIT-ROBO Rho GTPase activating protein 3 INVOLVED IN regulation of postsynapse assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955561 612152 835209 - 102027910 AGCD01073823;AGCD01073824;AGCD01073825;GBBH01172154;XM_005413001;XM_005413003;XM_013509102;XM_013509103 XP_005413058;XP_005413060;XP_013364556;XP_013364557 MODEL 8790397 pseudo LOC102005914 shugoshin-like 1 pseudogene NW_004955465 13332971 13334196 - 102005914 AGCD01050600 MODEL 8940670 pseudo LOC102004874 F-box only protein 42-like NW_004955402 39161338 39165052 - 102004874 AGCD01000977 MODEL 8746266 protein-coding Slc35d2 solute carrier family 35 member D2 ENCODES a protein that exhibits nucleotide-sugar transmembrane transporter activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955422 23544376 23582585 + 102011129 AGCD01023195;AGCD01023196;AGCD01023197;GBBH01107187;GBCB01051625;XM_013514308 XP_013369762 MODEL 8769646 pseudo LOC102011246 rRNA-processing protein FCF1 homolog pseudogene NW_004955438 12170534 12171127 - 102011246 AGCD01035254 MODEL 39132291 snrna U12 U12 minor spliceosomal RNA 8955964 pseudo LOC102019498 eukaryotic peptide chain release factor subunit 1-like NW_004955415 4586723 4588014 + 102019498 AGCD01015975 MODEL 39132716 snrna U4 U4 spliceosomal RNA 8703988 protein-coding Rangap1 Ran GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); RNA binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to peptide hormone stimulus (ortholog); cellular response to vasopressin (ortholog); negative regulation of protein export from nucleus (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Carotid Artery Injuries (ortholog); FOUND IN axon cytoplasm (ortholog); cytoplasm (ortholog); cytoplasmic periphery of the nuclear pore complex (ortholog) NW_004955413 26869487 26894192 - 102016691 AGCD01014485;GBDJ01275353;XM_005379343;XM_005379344;XM_013511354 XP_005379400;XP_005379401;XP_013366808 MODEL 39131365 protein-coding C13orf42 chromosome 13 open reading frame 42 730469270 snorna SNORA17 Small nucleolar RNA SNORA17 8889560 protein-coding Rc3h2 ring finger and CCCH-type domains 2 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); mRNA binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); limb development (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); membrane (ortholog) NW_004955419 5054288 5103926 + 102003767 AGCD01019781;AGCD01019782;GBDF01192823;XM_005382518;XM_005382519 XP_005382575;XP_005382576 MODEL 10257894 ncrna LOC106147450 uncharacterized LOC106147450 NW_004955561 1737039 1737795 + 106147450 AGCD01073864;GBDK01424128;XR_001232358 MODEL 8996930 protein-coding Plekhh3 pleckstrin homology, MyTH4 and FERM domain containing H3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog) NW_004955451 16523822 16531563 - 102028607 AGCD01043687;AGCD01043688;GBBH01062427;GBCB01003667;XM_013519145 XP_013374599 MODEL 9060919 protein-coding Rgs21 regulator of G protein signaling 21 INVOLVED IN sensory perception of bitter taste (ortholog); sensory perception of sweet taste (ortholog); sensory perception of umami taste (ortholog) NW_004955406 29778745 29800009 + 102016886 AGCD01006341;AGCD01006342;XM_005375097 XP_005375154 MODEL 730469582 snorna SNORA9 Small nucleolar RNA SNORA9 8892776 ncrna LOC102007395 uncharacterized LOC102007395 NW_004955451 5460378 5468253 + 102007395 AGCD01043168;GBBH01102354;XR_262581 MODEL 8924826 trna Trnaf-aaa transfer RNA phenylalanine (anticodon AAA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955465 13258353 13258434 + 101978786 AGCD01050595 MODEL 39133450 snorna SNORD58 Small nucleolar RNA SNORD58 9031253 protein-coding Sfrp1 secreted frizzled related protein 1 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); frizzled binding (ortholog); heparin binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone trabecula formation (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); diastolic heart failure (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); extracellular matrix (ortholog) NW_004955536 1663721 1702678 + 102015981 AGCD01070766;GBCE01029787;XM_005410533 XP_005410590 MODEL 9063163 protein-coding Pir pirin ENCODES a protein that exhibits metal ion binding (ortholog); quercetin 2,3-dioxygenase activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN monocyte differentiation (ortholog); myeloid cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); contact dermatitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955519 2698207 2813201 + 102016304 AGCD01067938;AGCD01067939;AGCD01067940;AGCD01067941;AGCD01067942;GBCB01087098;XM_005409167;XM_013507011;XM_013507012;XM_013507013 XP_005409224;XP_013362465;XP_013362466;XP_013362467 MODEL 9043453 protein-coding Wdr20 WD repeat domain 20 ENCODES a protein that exhibits deubiquitinase activator activity (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Developmental Disabilities (ortholog); hydrocephalus (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); peptidase complex (ortholog) NW_004955538 1520336 1590824 + 102026907 AGCD01071069;AGCD01071070;AGCD01071071;AGCD01071072;AGCD01071073;AGCD01071074;GBDF01083282;XM_005410738;XM_005410739;XM_005410740;XM_005410743;XM_005410746;XM_005410747;XM_005410748;XM_013507829;XM_013507830;XM_013507831 XP_005410795;XP_005410796;XP_005410797;XP_005410800;XP_005410803;XP_005410804;XP_005410805;XP_013363283;XP_013363284;XP_013363285 MODEL 8783437 ncrna LOC102006252 uncharacterized LOC102006252 NW_004955486 9666236 9670686 - 102006252 AGCD01059195;GBDK01396724;XR_001231108;XR_001231109;XR_001231110;XR_001231111;XR_001231112;XR_263975;XR_263977 MODEL 9055653 pseudo LOC102011252 coiled-coil domain-containing protein 94 pseudogene NW_004955549 1407026 1453477 + 102011252 AGCD01072448;AGCD01072449 MODEL 8964581 ncrna LOC102004107 uncharacterized LOC102004107 NW_004955516 3479563 3512968 + 102004107 AGCD01067493;AGCD01067494;GBCB01099233;XR_264534;XR_264535 MODEL 8889702 protein-coding LOC102008930 cytospin-B NW_004955467 1024739 1302878 + 102008930 AGCD01051247;AGCD01051248;AGCD01051249;AGCD01051250;AGCD01051251;AGCD01051252;AGCD01051253;AGCD01051254;AGCD01051255;AGCD01051256;GBBH01086340;XM_005399302;XM_005399304;XM_013522196;XM_013522197;XM_013522198;XM_013522199;XM_013522200;XM_013522201;XM_013522202;XM_013522203;XM_013522204;XM_013522205 XP_005399359;XP_005399361;XP_013377650;XP_013377651;XP_013377652;XP_013377653;XP_013377654;XP_013377655;XP_013377656;XP_013377657;XP_013377658;XP_013377659 MODEL 8943205 protein-coding Timm9 translocase of inner mitochondrial membrane 9 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-folding chaperone binding (ortholog); unfolded protein holdase activity (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog) NW_004955466 12115003 12125024 - 102005688 AGCD01051113;GBCE01045930;XM_005399218;XM_005399219;XM_013521977 XP_005399275;XP_005399276;XP_013377431 MODEL 8773230 protein-coding Ppp1cb protein phosphatase 1 catalytic subunit beta ENCODES a protein that exhibits myosin-light-chain-phosphatase activity (ortholog); phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); entrainment of circadian clock by photoperiod (ortholog); protein dephosphorylation (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; dopamine signaling pathway; glycogen biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cryptorchidism (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955469 10657029 10682398 + 102015501 AGCD01052544;GBCQ01003561;XM_005400536;XM_013522618 XP_005400593;XP_013378072 MODEL 8951641 protein-coding Pole3 DNA polymerase epsilon 3, accessory subunit INVOLVED IN chromatin remodeling (ortholog); DNA-templated DNA replication (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN ISWI family mediated chromatin remodeling pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN ATAC complex (ortholog); epsilon DNA polymerase complex (ortholog); pericentric heterochromatin (ortholog) NW_004955419 14086940 14089906 + 102019174 AGCD01020011;AGCD01020012;GBBH01117842;GBDF01085263;XM_005382662 XP_005382719 MODEL 9058040 protein-coding LOC102018299 olfactory receptor 7E24-like NW_004955495 664850 665820 - 102018299 AGCD01061648;XM_005405556 XP_005405613 MODEL 8911962 pseudo LOC102010100 putative homeodomain transcription factor 2 pseudogene NW_004955442 14465591 14468091 + 102010100 AGCD01037821 MODEL 8772337 protein-coding Snx27 sorting nexin 27 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); ionotropic glutamate receptor binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); endocytic recycling (ortholog); endosomal transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); endosome (ortholog) NW_004955589 719892 799367 - 102019344 AGCD01076181;AGCD01076182;AGCD01076183;GBCQ01062668;XM_005414566;XM_005414567;XM_005414568 XP_005414623;XP_005414624;XP_005414625 MODEL 8789734 pseudo LOC102005556 ATP-binding cassette sub-family F member 2 pseudogene NW_004955406 13707389 13709243 + 102005556 AGCD01005949 MODEL 8854358 protein-coding Sel1l2 SEL1L2 adaptor subunit of SYVN1 ubiquitin ligase ASSOCIATED WITH acute myeloid leukemia (ortholog); lung squamous cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN cilium (ortholog); nuclear speck (ortholog) NW_004955415 23290343 23392613 - 102005797 AGCD01016552;AGCD01016553;GBDK01223152;XM_013512280;XM_013512281 XP_013367734;XP_013367735 MODEL 10061161 ncrna LOC106150346 uncharacterized LOC106150346 NW_004955473 10878402 10891431 + 106150346 AGCD01054117;GBDJ01233778;XR_001237108 MODEL 8824737 protein-coding Snorc secondary ossification center associated regulator of chondrocyte maturation INVOLVED IN cartilage development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog) NW_004955453 3187624 3192605 - 102012921 AGCD01044653;AGCD01044654;GBBH01177124;XM_013519900 XP_013375354 MODEL 8828575 protein-coding Phf11 PHD finger protein 11 ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955431 2945119 2974767 + 102025491 AGCD01029942;AGCD01029943;AGCD01029944;GBDJ01072576;XM_005387593 XP_005387650 MODEL 8833772 protein-coding LOC102012075 cytochrome P450 4A6-like NW_004955464 11526301 11537560 + 102012075 AGCD01050155;GBBH01214054;XM_005398648;XM_013521715 XP_005398705;XP_013377169 MODEL 8893042 pseudo LOC102011715 pre-mRNA-splicing factor SLU7 pseudogene NW_004955402 54098472 54100151 + 102011715 AGCD01001386 MODEL 8738003 ncrna LOC102008558 uncharacterized LOC102008558 NW_004955430 15103778 15104993 + 102008558 AGCD01029588;GBDF01089462;XR_261428 MODEL 8989048 protein-coding Spcs2 signal peptidase complex subunit 2 INVOLVED IN protein processing (ortholog); ASSOCIATED WITH sarcoma (ortholog); stomach cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); signal peptidase complex (ortholog) NW_004955414 16807986 16825013 - 102005249 AGCD01015225;GBDI01004293;XM_005379911 XP_005379968 MODEL 8995118 protein-coding Slc35d3 solute carrier family 35 member D3 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); UDP-glucose transmembrane transporter activity (ortholog); INVOLVED IN energy homeostasis (ortholog); platelet dense granule organization (ortholog); positive regulation of autophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955439 60689 63968 - 102019203 AGCD01035579;XM_005390458 XP_005390515 MODEL 10388026 protein-coding Prss57 serine protease 57 ENCODES a protein that exhibits heparin binding (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); long QT syndrome (ortholog); FOUND IN azurophil granule lumen (ortholog); extracellular region (ortholog) NW_004955495 7067844 7077048 + 106146768 AGCD01062117;XM_013505061 XP_013360515 MODEL 8937518 protein-coding LOC102010870 keratin-associated protein 20-2-like NW_004955407 30265855 30266145 + 102010870 AGCD01007631;AGCD01007632;XM_005375652 XP_005375709 MODEL 39133474 snrna U4 U4 spliceosomal RNA 730469095 snorna SNORA17 Small nucleolar RNA SNORA17 8782605 protein-coding Trak1 trafficking kinesin protein 1 ENCODES a protein that exhibits GABA receptor binding (ortholog); TPR domain binding (ortholog); INVOLVED IN axonal transport of mitochondrion (ortholog); dendrite morphogenesis (ortholog); endosome to lysosome transport (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN axonal growth cone (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955420 28457179 28547585 - 102003973 AGCD01021478;AGCD01021479;AGCD01021480;GBBH01163772;XM_005383550;XM_005383551;XM_005383552;XM_005383553;XM_005383562;XM_013513471;XM_013513472 XP_005383607;XP_005383608;XP_005383609;XP_005383610;XP_005383619;XP_013368925;XP_013368926 MODEL 9063749 protein-coding Prkar1b protein kinase cAMP-dependent type I regulatory subunit beta ENCODES a protein that exhibits cAMP binding (ortholog); cAMP-dependent protein kinase inhibitor activity (ortholog); cAMP-dependent protein kinase regulator activity (ortholog); INVOLVED IN learning or memory (ortholog); modulation of chemical synaptic transmission (ortholog); negative regulation of cAMP/PKA signal transduction (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cAMP-dependent protein kinase complex (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955460 8357890 8479875 - 102010036 AGCD01048515;AGCD01048516;AGCD01048517;GBDJ01276904;XM_005397778;XM_005397779 XP_005397835;XP_005397836 MODEL 8777141 protein-coding Ptp4a2 protein tyrosine phosphatase 4A2 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); diastolic heart failure (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955452 10293958 10331868 - 102013578 AGCD01044271;AGCD01044272;AGCD01044273;GBDI01068104;XM_005395037 XP_005395094 MODEL 8912933 pseudo LOC102022385 tropomyosin alpha-3 chain pseudogene NW_004955415 23751994 23752771 - 102022385 AGCD01016560;XR_260339 MODEL 8958547 protein-coding LOC102013296 olfactory receptor 14A2-like NW_004955418 30355010 30355939 - 102013296 AGCD01019514;XM_005382373 XP_005382430 MODEL 8801384 pseudo LOC102016344 aminoacyl tRNA synthase complex-interacting multifunctional protein 2 pseudogene NW_004955406 39899949 39901717 - 102016344 AGCD01006645 MODEL 8731351 protein-coding LOC102004875 PRAME family member 12-like NW_004955608 52750 55759 + 102004875 AGCD01076996;XM_005414909 XP_005414966 MODEL 39133583 snrna U2 U2 spliceosomal RNA 8729776 pseudo LOC102019852 RAC-beta serine/threonine-protein kinase pseudogene NW_004955545 971815 973032 - 102019852 AGCD01071829;XM_005411742 MODEL 9003642 protein-coding Pirt phosphoinositide interacting regulator of transient receptor potential channels ENCODES a protein that exhibits phosphatidylinositol bisphosphate binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); response to heat (ortholog); FOUND IN plasma membrane (ortholog) NW_004955467 6375992 6391770 + 102028844 AGCD01051413;GBDI01166080;XM_005399356 XP_005399413 MODEL 8856559 protein-coding Rrm2 ribonucleotide reductase regulatory subunit M2 ENCODES a protein that exhibits ferric iron binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN 2'-deoxyribonucleotide biosynthetic process (ortholog); deoxyribonucleotide biosynthetic process (ortholog); deoxyribonucleotide metabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear envelope (ortholog) NW_004955487 5477097 5481422 + 102027988 AGCD01059337;GBDF01120663;XM_005404407 XP_005404464 MODEL 9042646 protein-coding Rangrf RAN guanine nucleotide release factor ENCODES a protein that exhibits channel activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); mitotic spindle assembly (ortholog); positive regulation of membrane depolarization during cardiac muscle cell action potential (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Cardiac Arrhythmias (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955467 8622843 8624401 - 102019489 AGCD01051463;GBDI01136193;XM_005399416 XP_005399473 MODEL 41410888 protein-coding C16orf87 chromosome 16 open reading frame 87 10229344 pseudo LOC106147452 molybdopterin synthase catalytic subunit-like NW_004955562 1392279 1398829 - 106147452 AGCD01073977 MODEL 8989772 protein-coding Rcan1 regulator of calcineurin 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); locomotion involved in locomotory behavior (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN calcineurin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Cardiomegaly (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955407 33873427 33951762 - 102027814 AGCD01007714;AGCD01007715;GBBH01172918;XM_005375706 XP_005375763 MODEL 8962766 protein-coding Plekhj1 pleckstrin homology domain containing J1 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog) NW_004955495 5904410 5907211 + 102017470 AGCD01062043;GBDF01082206;XM_005405916 XP_005405973 MODEL 8984866 pseudo LOC102018302 nucleolar GTP-binding protein 2-like NW_004955423 15646160 15649256 - 102018302 AGCD01023812;AGCD01023813 MODEL 8717156 protein-coding LOC102007397 uncharacterized LOC102007397 NW_004955403 53982569 53983635 + 102007397 AGCD01003083;GBDK01203485;XM_005373841 XP_005373898 MODEL 39133735 ribozyme RNaseP_nuc Nuclear RNase P 8897788 trna Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978787 AGCD01003541;AGCD01050597;AGCD01050631;AGCD01050636;AGCD01057309;AGCD01062085;AGCD01066489;AGCD01066490 MODEL 8877264 protein-coding Rgs22 regulator of G protein signaling 22 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) NW_004955417 15284368 15381984 - 102014356 AGCD01018227;AGCD01018228;AGCD01018229;AGCD01018230;AGCD01018231;GBBH01116898;XM_013512826 XP_013368280 MODEL 616940646 snorna SNORA55 Small nucleolar RNA SNORA55 8958279 protein-coding Srgn serglycin ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN granzyme-mediated programmed cell death signaling pathway (ortholog); maintenance of granzyme B location in T cell secretory granule (ortholog); maintenance of protease location in mast cell secretory granule (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytolytic granule (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955437 21954837 21966552 - 102026156 AGCD01034925;GBDI01004036;XM_005390096 XP_005390153 MODEL 9047385 pseudo LOC102010103 ubiquitin-conjugating enzyme E2 J1 pseudogene NW_004955444 6424523 6426955 - 102010103 AGCD01038865 MODEL 730469177 snorna SNORD59 Small nucleolar RNA SNORD59 9026807 protein-coding LOC102005915 translation initiation factor IF-2-like NW_004955465 13253449 13255976 - 102005915 AGCD01050595;GBDJ01330279;XM_005399010 XP_005399067 MODEL 8747464 protein-coding Epm2a EPM2A glucan phosphatase, laforin ENCODES a protein that exhibits alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (ortholog); carbohydrate binding (ortholog); carbohydrate phosphatase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH cataract (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog) NW_004955436 14925452 14982357 + 102005839 AGCD01033880;AGCD01033881;AGCD01033882;GBBH01222266;XM_005389308 XP_005389365 MODEL 10115528 ncrna LOC106150347 uncharacterized LOC106150347 NW_004955473 2713081 2793520 - 106150347 AGCD01053907;XR_001237110;XR_001237111 MODEL 8947675 protein-coding Sel1l3 SEL1L family member 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955443 19317461 19406721 + 102019650 AGCD01038624;GBCQ01067499;XM_005392032;XM_013518080 XP_005392089;XP_013373534 MODEL 8877072 protein-coding LOC102008186 gamma-crystallin B NW_004955457 6977737 6979696 + 102008186 AGCD01046862;XM_005396970 XP_005397027 MODEL 730469282 snorna SNORA40 Small nucleolar RNA SNORA40 8708009 pseudo LOC102019505 AP-3 complex subunit sigma-1 pseudogene NW_004955419 14065813 14066477 + 102019505 AGCD01020010 MODEL 8700315 protein-coding Sfrp2 secreted frizzled related protein 2 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); enzyme activator activity (ortholog); fibronectin binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); apoptotic process (ortholog); branching involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); inflammatory bowel disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955471 8103937 8112596 - 102006653 AGCD01053178;AGCD01053179;GBBH01060570;GBDJ01000856;XM_005400928 XP_005400985 MODEL 9003964 ncrna LOC102011719 uncharacterized LOC102011719 NW_004955799 1703 3502 + 102011719 AGCD01078370;GBDF01089331;XR_265186 MODEL 8927610 protein-coding Spcs3 signal peptidase complex subunit 3 INVOLVED IN protein processing (ortholog); proteolysis (ortholog); viral protein processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); signal peptidase complex (ortholog) NW_004955403 31451426 31461032 - 102016549 AGCD01002417;GBBH01064568;GBCQ01093575;XM_005373515 XP_005373572 MODEL 8994900 ncrna LOC102008932 uncharacterized LOC102008932 NW_004955468 2457664 2458509 + 102008932 AGCD01051818;GBDK01424972;XR_263377 MODEL 8899113 protein-coding LOC102011255 leukocyte immunoglobulin-like receptor subfamily A member 5 NW_004955567 1233166 1237734 - 102011255 AGCD01074465;GBDF01000430;XM_005413374 XP_005413431 MODEL 8755077 protein-coding Rpap3 RNA polymerase II associated protein 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); protein folding chaperone complex (ortholog); R2TP complex (ortholog) NW_004955500 6585969 6595219 - 102023616 AGCD01063886;GBDK01131999;XM_013505705 XP_013361159 MODEL 8773462 pseudo LOC102010871 60S ribosomal protein L39 pseudogene NW_004955455 11174068 11175753 - 102010871 AGCD01045985;XM_005396506;XM_005396507 MODEL 8772321 protein-coding Timmdc1 translocase of inner mitochondrial membrane domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955427 19208029 19234763 + 102018005 AGCD01027360;AGCD01027361;AGCD01027362;GBDF01223947;XM_005386443;XM_013515089 XP_005386500;XP_013370543 MODEL 9030604 protein-coding Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B ENCODES a protein that exhibits identical protein binding (ortholog); ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (ortholog); INVOLVED IN 2'-deoxyribonucleotide biosynthetic process (ortholog); deoxyribonucleoside triphosphate metabolic process (ortholog); deoxyribonucleotide biosynthetic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; gemcitabine pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 5 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955417 26949686 26976976 - 102016594 AGCD01018527;AGCD01018528;GBCC01047005;XM_005381935;XM_005381936;XM_005381937 XP_005381992;XP_005381993;XP_005381994 MODEL 8920114 protein-coding Ppp1cc protein phosphatase 1 catalytic subunit gamma ENCODES a protein that exhibits lamin binding (ortholog); phosphatase activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN blastocyst development (ortholog); circadian regulation of gene expression (ortholog); entrainment of circadian clock by photoperiod (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; dopamine signaling pathway; glycogen biosynthetic pathway; ASSOCIATED WITH cervical cancer (ortholog); congestive heart failure (ortholog); lung cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955482 7582605 7605340 - 102026527 AGCD01057477;GBDF01006573;XM_005403165 XP_005403222 MODEL 8821874 protein-coding Prss58 serine protease 58 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog) NW_004955494 1277333 1283610 + 102011880 AGCD01061393;GBDF01008495;XM_005405396 XP_005405453 MODEL 8828676 pseudo LOC102003085 translationally-controlled tumor protein pseudogene NW_004955404 18220065 18220653 + 102003085 AGCD01003611 MODEL 9047719 protein-coding Pole4 DNA polymerase epsilon 4, accessory subunit INVOLVED IN DNA-templated DNA replication (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN ATAC complex (ortholog); epsilon DNA polymerase complex (ortholog); nucleoplasm (ortholog) NW_004955424 10839639 10844985 - 102018742 AGCD01024531;GBDI01113587;XM_005385473 XP_005385530 MODEL 8979090 protein-coding LOC102005559 FUN14 domain-containing protein 1-like NW_004955406 23472527 23473294 - 102005559 AGCD01006171;GBDF01050560;XM_005375060 XP_005375117 MODEL 8948583 protein-coding Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); cAMP binding (ortholog); cAMP-dependent protein kinase inhibitor activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); negative regulation of cAMP/PKA signal transduction (ortholog); positive regulation of meiotic cell cycle process involved in oocyte maturation (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); congestive heart failure (ortholog); FOUND IN axoneme (ortholog); cAMP-dependent protein kinase complex (ortholog); centrosome (ortholog) NW_004955532 827112 896487 - 102006281 AGCD01070155;AGCD01070156;AGCD01070157;GBDF01007082;XM_005410362 XP_005410419 MODEL 8923657 ncrna LOC102022388 uncharacterized LOC102022388 NW_004955478 11128973 11130658 + 102022388 AGCD01056161;GBDF01005544;XR_263725;XR_263726 MODEL 126903057 snorna SNORD100 Small nucleolar RNA SNORD100 8974066 ncrna LOC102013298 uncharacterized LOC102013298 NW_004955485 7764867 7771120 - 102013298 AGCD01058675;GBBH01203416;XR_001231069;XR_001231070;XR_001231071;XR_001231072;XR_001231073 MODEL 8886971 ncrna LOC102004111 uncharacterized LOC102004111 NW_004955434 23261266 23296395 + 102004111 AGCD01032700;AGCD01032701;GBDK01349819;XR_001234809;XR_001234810;XR_001234811;XR_001234812;XR_261646 MODEL 39133585 snrna U2 U2 spliceosomal RNA 8703566 pseudo LOC102006253 elongation factor 1-alpha 1-like NW_004955420 25364489 25376572 + 102006253 AGCD01021353;AGCD01021354 MODEL 8790057 protein-coding Wdr24 WD repeat domain 24 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); positive regulation of TOR signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); stomach cancer (ortholog); FOUND IN GATOR2 complex (ortholog); lysosomal membrane (ortholog) NW_004955442 16513074 16519296 + 102019336 AGCD01037901;GBDJ01084560;XM_005391617;XM_005391618 XP_005391674;XP_005391675 MODEL 39133485 snrna U4 U4 spliceosomal RNA 730469103 snorna SNORA17 Small nucleolar RNA SNORA17 8952368 protein-coding Trak2 trafficking kinesin protein 2 ENCODES a protein that exhibits enzyme binding (ortholog); GABA receptor binding (ortholog); kinesin binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); dendritic transport of mitochondrion (ortholog); endosome to lysosome transport (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN axonal growth cone (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955403 205372 261210 + 102020182 AGCD01001683;AGCD01001684;AGCD01001685;GBDK01185209;XM_005373197;XM_005373199;XM_005373200;XM_005373201;XM_013511713;XM_013511715 XP_005373254;XP_005373256;XP_005373257;XP_005373258;XP_013367167;XP_013367169 MODEL 8938719 ncrna LOC102007399 uncharacterized LOC102007399 NW_004955405 764142 804289 + 102007399 AGCD01004584;AGCD01004585;GBDF01014030;XR_259356;XR_259357 MODEL 39133736 ribozyme RNaseP_nuc Nuclear RNase P 15036848 trna Trnag-acc transfer RNA glycine (anticodon ACC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978843 8862647 protein-coding Snx29 sorting nexin 29 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955442 6082362 6607440 - 102023201 AGCD01037580;AGCD01037581;AGCD01037582;AGCD01037583;AGCD01037584;AGCD01037585;AGCD01037586;AGCD01037587;AGCD01037588;AGCD01037589;AGCD01037590;GBDF01272494;XM_005391150;XM_013517836 XP_005391207;XP_013373290 MODEL 8856906 ncrna LOC102012076 uncharacterized LOC102012076 NW_004955412 13025707 13029033 - 102012076 AGCD01012827;GBDF01049222;XR_259987 MODEL 8984798 protein-coding LOC102016346 cytochrome c oxidase protein 20 homolog INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); central sleep apnea (ortholog); cytochrome-c oxidase deficiency disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955406 7994226 8002639 + 102016346 AGCD01005786;AGCD01005787;GBBH01033142;GBDF01003564;XM_013520397 XP_013375851 MODEL 730469484 snorna SNORD59 Small nucleolar RNA SNORD59 8842893 protein-coding LOC102004876 PRAME family member 12-like NW_004955615 158242 175579 - 102004876 AGCD01077251;XM_005414982 XP_005415039 MODEL 10197959 ncrna LOC106150348 uncharacterized LOC106150348 NW_004955473 5124678 5163502 + 106150348 AGCD01053967;AGCD01053968;AGCD01053969;AGCD01053970;AGCD01053971;XR_001237115 MODEL 126903047 protein-coding C17orf114 chromosome 17 open reading frame 114 8755541 protein-coding Pisd phosphatidylserine decarboxylase ENCODES a protein that exhibits phosphatidylserine decarboxylase activity (ortholog); INVOLVED IN lipid droplet formation (ortholog); mitochondrial protein catabolic process (ortholog); phosphatidylethanolamine biosynthetic process (ortholog); PARTICIPATES IN forkhead class A signaling pathway; glycerophospholipid metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Childhood Schizophrenia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955455 5744816 5789408 - 102011278 AGCD01045751;AGCD01045752;GBDI01217037;XM_005396318;XM_005396319;XM_005396321;XM_005396322;XM_013520418;XM_013520419;XM_013520420 XP_005396375;XP_005396376;XP_005396378;XP_005396379;XP_013375872;XP_013375873;XP_013375874 MODEL 9042883 protein-coding Rcan2 regulator of calcineurin 2 INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); locomotion involved in locomotory behavior (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog) NW_004955437 11243195 11406488 - 102004320 AGCD01034572;AGCD01034573;AGCD01034574;GBDF01044432;XM_005389848;XM_005389850;XM_005389852;XM_005389853;XM_005389854;XM_005389855 XP_005389905;XP_005389907;XP_005389909;XP_005389910;XP_005389911;XP_005389912 MODEL 8707197 protein-coding LOC102008559 olfactory receptor 1440-like NW_004955511 3846306 3866765 - 102008559 AGCD01066478;AGCD01066479;XM_013506388 XP_013361842 MODEL 9046826 protein-coding LOC102018303 zinc finger protein 69-like NW_004955495 7428743 7464274 - 102018303 AGCD01062137;AGCD01062138;AGCD01062139;AGCD01062140;AGCD01062141;GBDF01077565;GBDF01187778;XM_013505355 XP_013360809 MODEL 8823654 protein-coding Plekhm1 pleckstrin homology and RUN domain containing M1 INVOLVED IN autophagosome-lysosome fusion (ortholog); late endosome to lysosome transport (ortholog); lysosome localization (ortholog); ASSOCIATED WITH Autosomal Dominant Osteopetrosis 3 (ortholog); autosomal recessive osteopetrosis 1 (ortholog); autosomal recessive osteopetrosis 6 (ortholog); FOUND IN autolysosome (ortholog); autolysosome membrane (ortholog); endosome membrane (ortholog) NW_004955451 18043194 18079808 - 102027259 AGCD01043790;GBDI01179295;XM_005394577;XM_013519289;XM_013519290;XM_013519291;XM_013519292;XM_013519293;XM_013519294;XM_013519295;XM_013519296 XP_005394634;XP_013374743;XP_013374744;XP_013374745;XP_013374746;XP_013374747;XP_013374748;XP_013374749;XP_013374750 MODEL 9061273 protein-coding Slc35d4 solute carrier family 35 member D4 ENCODES a protein that exhibits UDP-N-acetylglucosamine transmembrane transporter activity (ortholog); INVOLVED IN UDP-N-acetylglucosamine transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955402 11514232 11641494 - 102003502 AGCD01000301;AGCD01000302;AGCD01000303;AGCD01000304;GBDJ01391258;XM_005372695;XM_005372698;XM_013503380;XM_013503447;XM_013503471;XM_013503525;XM_013503621;XM_013503657;XM_013503693;XM_013503737;XM_013503805;XR_001230957;XR_001230962;XR_001230968;XR_001231032 XP_005372752;XP_005372755;XP_013358834;XP_013358901;XP_013358925;XP_013358979;XP_013359075;XP_013359111;XP_013359147;XP_013359191;XP_013359259 MODEL 8893433 protein-coding LOC102003087 eukaryotic translation initiation factor 1A, X-chromosomal-like NW_004955405 22619382 22620342 + 102003087 AGCD01005097;GBDF01111439;XM_005374400 XP_005374457 MODEL 8711922 protein-coding LOC102010104 olfactory receptor 7G2-like NW_004955563 273849 274787 + 102010104 AGCD01074059;XM_005413199 XP_005413256 MODEL 8834238 protein-coding Polg DNA polymerase gamma, catalytic subunit ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 5'-deoxyribose-5-phosphate lyase activity (ortholog); chromatin binding (ortholog); INVOLVED IN base-excision repair (ortholog); base-excision repair, gap-filling (ortholog); cellular response to glucose stimulus (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria (ortholog); Abnormal Reflexes (ortholog); Acute Liver Failure (ortholog); FOUND IN gamma DNA polymerase complex (ortholog); mitochondrial chromosome (ortholog); mitochondrial matrix (ortholog) NW_004955416 15773005 15788736 + 102003340 AGCD01017343;GBDI01169870;XM_005381556 XP_005381613 MODEL 8929660 ncrna LOC102019853 uncharacterized LOC102019853 NW_004955441 8638196 8639968 + 102019853 AGCD01036989;GBDF01046408;XR_262060 MODEL 8961440 protein-coding Prkar2b protein kinase cAMP-dependent type II regulatory subunit beta ENCODES a protein that exhibits cAMP binding (ortholog); cAMP-dependent protein kinase inhibitor activity (ortholog); cAMP-dependent protein kinase regulator activity (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); learning (ortholog); modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); congestive heart failure (ortholog); FOUND IN cAMP-dependent protein kinase complex (ortholog); centrosome (ortholog); ciliary base (ortholog) NW_004955410 11529530 11620085 + 102017752 AGCD01010826;AGCD01010827;AGCD01010828;AGCD01010829;GBCQ01036114;XM_013510492 XP_013365946 MODEL 730469294 snorna SNORA40 Small nucleolar RNA SNORA40 8706978 protein-coding Sfrp4 secreted frizzled related protein 4 ENCODES a protein that exhibits Wnt-protein binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); decidualization (ortholog); female pregnancy (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Colorectal Neoplasms (ortholog); Experimental Arthritis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955460 5654187 5666475 + 102026611 AGCD01048456;GBDJ01005445;XM_005397748 XP_005397805 MODEL 8926808 ncrna LOC102013303 uncharacterized LOC102013303 NW_004955421 26314686 26333180 - 102013303 AGCD01022259;AGCD01022260;GBDF01281827;XR_001233836;XR_001233837;XR_260829 MODEL 8913606 ncrna LOC102019510 uncharacterized LOC102019510 NW_004955497 4056191 4062405 + 102019510 AGCD01062564;GBCQ01031347;XR_264203 MODEL 8738801 pseudo LOC102004115 ferritin heavy chain pseudogene NW_004955535 3341451 3342152 + 102004115 AGCD01070692;XM_005410497 MODEL 8788869 protein-coding Rap1a RAP1A, member of RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to cAMP (ortholog); cellular response to forskolin (ortholog); PARTICIPATES IN adenosine signaling pathway; E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); dense core granule (ortholog) NW_004955435 15090521 15171397 + 102028125 AGCD01033262;GBCQ01034816;XM_005388951;XM_013516528;XM_013516529 XP_005389008;XP_013371982;XP_013371983 MODEL 10353084 protein-coding LOC106147453 serine/arginine repetitive matrix protein 1-like NW_004955408 21361836 21362295 - 106147453 AGCD01008553;GBCQ01030344;XM_013509124 XP_013364578 MODEL 8744818 protein-coding LOC102011261 vomeronasal type-1 receptor 4-like NW_004955584 575353 576579 - 102011261 AGCD01075948;XM_005414368 XP_005414425 MODEL 39133486 snrna U4 U4 spliceosomal RNA 39131361 protein-coding RPAP3 RNA polymerase II associated protein 3 8805802 protein-coding Timp1 TIMP metallopeptidase inhibitor 1 ENCODES a protein that exhibits cytokine activity (ortholog); metalloendopeptidase inhibitor activity (ortholog); peptidase inhibitor activity (ortholog); INVOLVED IN cartilage development (ortholog); cellular response to acetaldehyde (ortholog); cellular response to peptide (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH adrenoleukodystrophy (ortholog); adult respiratory distress syndrome (ortholog); alcoholic liver cirrhosis (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955516 507113 511360 - 102013747 AGCD01067385;GBCQ01096551;XM_005408935;XM_005408936;XM_013506915;XM_013506916 XP_005408992;XP_005408993;XP_013362369;XP_013362370 MODEL 8877634 protein-coding Tram1 translocation associated membrane protein 1 INVOLVED IN cotranslational protein targeting to membrane (ortholog); protein insertion into ER membrane (ortholog); response to unfolded protein (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955444 9110533 9153585 + 102030248 AGCD01038959;AGCD01038960;AGCD01038961;GBDK01002034;XM_005392105 XP_005392162 MODEL 730468967 snorna SNORA57 Small nucleolar RNA SNORA57 8899036 pseudo LOC102007401 zinc finger MYM-type protein 5-like NW_004955452 14055063 14061537 + 102007401 AGCD01044449 MODEL 10200077 protein-coding Prss8 serine protease 8 ENCODES a protein that exhibits sodium channel regulator activity (ortholog); INVOLVED IN positive regulation of sodium ion transmembrane transport (ortholog); positive regulation of sodium ion transport (ortholog); response to mineralocorticoid (ortholog); ASSOCIATED WITH alopecia (ortholog); autosomal recessive congenital ichthyosis 4B (ortholog); breast carcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); membrane raft (ortholog) NW_004955493 7970929 7976885 - 106146726 AGCD01061245;GBCE01136676;XM_013504883 XP_013360337 MODEL 8720375 pseudo LOC102005916 COMM domain-containing protein 8 pseudogene NW_004955466 2360352 2361351 - 102005916 AGCD01050734 MODEL 8759203 protein-coding Phf12 PHD finger protein 12 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); transcription corepressor activity (ortholog); transcription corepressor binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Developmental Disease (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); Sin3-type complex (ortholog) NW_004955481 4223803 4268640 + 102016708 AGCD01056932;GBDF01191922;XM_005402698;XM_013503419 XP_005402755;XP_013358873 MODEL 8974164 protein-coding Sri sorcin ENCODES a protein that exhibits calcium ion binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transport (ortholog); heart development (ortholog); negative regulation of cardiac muscle contraction (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); congestive heart failure (ortholog); esophageal cancer (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); chromaffin granule membrane (ortholog) NW_004955432 5541311 5559781 - 102017906 AGCD01030786;GBCQ01042054;XM_005387978;XM_005387979;XM_013516016 XP_005388035;XP_005388036;XP_013371470 MODEL 8860547 trna Trnag-ccc transfer RNA glycine (anticodon CCC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955442;NW_004955424 16570981;14887366 16571051;14887436 +;+ 101978846 AGCD01024664;AGCD01037901 MODEL 616940633 snorna SNORD102 Small nucleolar RNA SNORD102 8990003 protein-coding Snx3 sorting nexin 3 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN hemoglobin biosynthetic process (ortholog); host-mediated suppression of symbiont invasion (ortholog); intralumenal vesicle formation (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955411 33339974 33344563 - 102011098 AGCD01012354;GBCE01000037;XM_005377844 XP_005377901 MODEL 9016062 protein-coding Sele selectin E ENCODES a protein that exhibits oligosaccharide binding (ortholog); phospholipase binding (ortholog); sialic acid binding (ortholog); INVOLVED IN actin filament-based process (ortholog); heterophilic cell-cell adhesion (ortholog); leukocyte cell-cell adhesion (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); allergic contact dermatitis (ortholog); aortic atherosclerosis (ortholog); FOUND IN caveola (ortholog); clathrin-coated pit (ortholog); cortical cytoskeleton (ortholog) NW_004955462 7564437 7575297 + 102011184 AGCD01049308;XM_013521360 XP_013376814 MODEL 8807231 protein-coding Epm2aip1 EPM2A interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of glycogen biosynthetic process (ortholog); response to insulin (ortholog); ASSOCIATED WITH hereditary nonpolyposis colorectal cancer type 2 (ortholog); Lynch syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); nucleus (ortholog) NW_004955421 3882486 3889851 - 102005049 AGCD01021672;GBDI01180311;XM_005383692 XP_005383749 MODEL 730469271 snorna SNORD59 Small nucleolar RNA SNORD59 39132019 snrna U2 U2 spliceosomal RNA 8765153 protein-coding Spdef SAM pointed domain containing ETS transcription factor ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN intestinal epithelial cell development (ortholog); lung goblet cell differentiation (ortholog); negative regulation of cell fate commitment (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955437 2667499 2679940 - 102017812 AGCD01034284;GBDJ01272719;XM_005389528;XM_013517102 XP_005389585;XP_013372556 MODEL 8979212 protein-coding LOC102010872 zinc finger protein 14-like NW_004955457 13021955 13040077 - 102010872 AGCD01047034;AGCD01047035;GBDF01018457;XM_005397067 XP_005397124 MODEL 730469155 misc_rna PISRT1 Polled intersex syndrome regulated transcript 1 730469104 snorna SNORA17 Small nucleolar RNA SNORA17 8864384 protein-coding C1d C1D nuclear receptor corepressor ENCODES a protein that exhibits DNA binding (ortholog); nuclear receptor binding (ortholog); RNA binding (ortholog); INVOLVED IN maturation of 5.8S rRNA (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955424 16787094 16801600 + 102024132 AGCD01024753;GBDF01045582;XM_013514751 XP_013370205 MODEL 8863835 ncrna LOC102005562 uncharacterized LOC102005562 NW_004955455 10714691 10715717 + 102005562 AGCD01045961;GBDJ01194372;XR_262853 MODEL 8839133 protein-coding Rgs3 regulator of G protein signaling 3 PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); bladder disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955419 13918274 14042090 - 102019811 AGCD01020009;GBBH01229198;XM_005382663;XM_005382665;XM_005382666;XM_005382668;XM_005382669;XM_005382670;XM_005382672;XM_005382673;XM_013513122;XM_013513124 XP_005382720;XP_005382722;XP_005382723;XP_005382725;XP_005382726;XP_005382727;XP_005382729;XP_005382730;XP_013368576;XP_013368578 MODEL 8859305 protein-coding LOC102011263 cornifin-B NW_004955592 410702 412632 - 102011263 AGCD01076312;GBCC01001188;XM_005414616 XP_005414673 MODEL 8766946 pseudo LOC102012078 ETS translocation variant 5 pseudogene NW_004955412 6032104 6035073 + 102012078 AGCD01012664 MODEL 8776302 protein-coding Plekhm2 pleckstrin homology and RUN domain containing M2 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN Golgi organization (ortholog); lysosome localization (ortholog); natural killer cell mediated cytotoxicity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955527 2438595 2453120 - 102010404 AGCD01069436;GBCE01096844;GBDJ01072717;XM_013507397 XP_013362851 MODEL 9002998 protein-coding LOC102010105 leukocyte immunoglobulin-like receptor subfamily B member 4 NW_004955567 1451186 1471664 - 102010105 AGCD01074476;GBCE01047626;XM_013509228 XP_013364682 MODEL 8972862 protein-coding Slc35e1 solute carrier family 35 member E1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); testicular germ cell cancer (ortholog); Testicular Germ Cell Tumor (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955524 1204227 1212833 + 102027333 AGCD01068739;GBCE01118450;GBDK01092588;XM_005409500 XP_005409557 MODEL 8789782 protein-coding LOC102008188 core histone macro-H2A.1 ENCODES a protein that exhibits ADP-D-ribose binding (ortholog); ADP-D-ribose modification-dependent protein binding (ortholog); chromatin binding (ortholog); INVOLVED IN DNA repair (ortholog); dosage compensation by inactivation of X chromosome (ortholog); epigenetic regulation of gene expression (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN Barr body (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955408 30497531 30550095 - 102008188 AGCD01008809;AGCD01008810;GBBH01000865;GBDK01090820;XM_005376471 XP_005376528 MODEL 8789152 protein-coding LOC102004878 transcription initiation factor TFIID subunit 3-like NW_004955761 1438 19347 - 102004878 AGCD01078303;GBCB01040970;GBDK01318503;XM_005415095 XP_005415152 MODEL 8729461 protein-coding LOC102008935 tripartite motif-containing protein 5-like NW_004955414 21565273 21579442 - 102008935 AGCD01015423;GBDI01215630;XM_013512005;XM_013512006 XP_013367459;XP_013367460 MODEL 9056963 pseudo LOC102006254 rab11 family-interacting protein 5-like NW_004955421 18213737 18219501 - 102006254 AGCD01022039 MODEL 8744578 protein-coding Polg2 DNA polymerase gamma 2, accessory subunit ENCODES a protein that exhibits DNA polymerase binding (ortholog); DNA polymerase processivity factor activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); in utero embryonic development (ortholog); mitochondrial DNA metabolic process (ortholog); ASSOCIATED WITH autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 4 (ortholog); Experimental Diabetes Mellitus (ortholog); mitochondrial DNA depletion syndrome 16 (ortholog); FOUND IN gamma DNA polymerase complex (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) NW_004955478 7376240 7396647 + 102027847 AGCD01055959;AGCD01055960;GBBH01117427;GBDI01128987;XM_013503174;XM_013503175 XP_013358628;XP_013358629 MODEL 10205732 ncrna LOC106150349 uncharacterized LOC106150349 NW_004955406 42051672 42055469 - 106150349 AGCD01006696;GBDI01085493;XR_001237116 MODEL 9012956 protein-coding Prkca protein kinase C alpha ENCODES a protein that exhibits calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); diacylglycerol-dependent serine/threonine kinase activity (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to carbohydrate stimulus (ortholog); central nervous system neuron axonogenesis (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN alphav-beta3 integrin-PKCalpha complex (ortholog); apical part of cell (ortholog); axon (ortholog) NW_004955478 5686639 6090356 + 102026217 AGCD01055884;AGCD01055885;AGCD01055886;AGCD01055887;GBDF01178284;GBDF01178288;XM_013503220;XM_013503221 XP_013358674;XP_013358675 MODEL 8884980 protein-coding Rrn3 RNA polymerase I transcription factor RRN3 ENCODES a protein that exhibits RNA polymerase binding (ortholog); RNA polymerase I core promoter sequence-specific DNA binding (ortholog); RNA polymerase I general transcription initiation factor activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cytoplasm organization (ortholog); DNA-templated transcription initiation (ortholog); PARTICIPATES IN mTOR signaling pathway; RNA polymerase I transcription pathway; ASSOCIATED WITH Parkinson's disease (ortholog); FOUND IN nucleolus (ortholog) NW_004955442 129106 166258 + 102020384 AGCD01037412;AGCD01037413;AGCD01037414;GBCE01046070;XM_005391055;XM_005391058 XP_005391112;XP_005391115 MODEL 8836357 protein-coding Ptp4a3 protein tyrosine phosphatase 4A3 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); endothelial cell migration (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Colonic Neoplasms (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955454 429051 440328 + 102015689 AGCD01044958;GBDI01229359;XM_005395723;XM_013520280;XM_013520281;XM_013520282 XP_005395780;XP_013375734;XP_013375735;XP_013375736 MODEL 8897338 protein-coding Wdr25 WD repeat domain 25 ASSOCIATED WITH Breast Cancer, Familial (ortholog); long QT syndrome (ortholog); lung cancer (ortholog) NW_004955438 21445502 21570271 + 102018335 AGCD01035544;AGCD01035545;AGCD01035546;AGCD01035547;GBBH01071352;GBDF01122161;XM_005390456 XP_005390513 MODEL 8881796 pseudo LOC102004117 period circadian protein homolog 3-like NW_004955437 138520 142991 + 102004117 AGCD01034105 MODEL 8960934 pseudo LOC102022391 sorting nexin-2 pseudogene NW_004955418 10862123 10863224 + 102022391 AGCD01018988 MODEL 730469467 snorna SNORA17 Small nucleolar RNA SNORA17 8772698 ncrna LOC102018304 uncharacterized LOC102018304 NW_004955424 21693778 21701536 - 102018304 AGCD01024903;GBBH01046018;XR_261096 MODEL 8773969 ncrna LOC102011721 uncharacterized LOC102011721 NW_004955403 45969900 45972939 - 102011721 AGCD01002845;XR_259243 MODEL 8769055 ncrna LOC102016348 uncharacterized LOC102016348 NW_004955408 5608423 5615545 + 102016348 AGCD01008145;AGCD01008146;GBDI01208582;XR_001232445 MODEL 9032804 ncrna LOC102003089 uncharacterized LOC102003089 NW_004955406 36472700 36585512 - 102003089 AGCD01006556;AGCD01006557;AGCD01006558;AGCD01006559;GBDF01249792;XR_001236830;XR_001236832;XR_001236833 MODEL 9051794 protein-coding Phf13 PHD finger protein 13 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin-protein adaptor activity (ortholog); histone H3K9me2/3 reader activity (ortholog); INVOLVED IN chromosome segregation (ortholog); DNA damage response (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955486 6018614 6025473 - 102006668 AGCD01059102;AGCD01059103;GBDF01049621;XM_005404074 XP_005404131 MODEL 730469296 snorna SNORA40 Small nucleolar RNA SNORA40 8714835 ncrna LOC102019856 uncharacterized LOC102019856 NW_004955442 15495092 15496400 + 102019856 AGCD01037875;GBBH01200853;XR_001235363 MODEL 8796651 trna Trnag-gcc transfer RNA glycine (anticodon GCC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978844 AGCD01042230;AGCD01043711;AGCD01049456;AGCD01051475;AGCD01057629;AGCD01058153;AGCD01058182;AGCD01067339;AGCD01074351 MODEL 8792317 protein-coding Sfrp5 secreted frizzled related protein 5 INVOLVED IN convergent extension involved in axis elongation (ortholog); digestive tract morphogenesis (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); cholangiocarcinoma (ortholog); Colorectal Neoplasms (ortholog) NW_004955507 3836607 3841910 - 102007576 AGCD01065638;GBDI01216661;XM_005407640 XP_005407697 MODEL 8749864 pseudo LOC102019513 L-lactate dehydrogenase B chain pseudogene NW_004955501 4712073 4713040 + 102019513 AGCD01064141 MODEL 8711416 protein-coding Ppp1r10 protein phosphatase 1 regulatory subunit 10 ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); protein phosphatase 1 binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN negative regulation of cardiac muscle cell apoptotic process (ortholog); negative regulation of mitotic DNA damage checkpoint (ortholog); negative regulation of transcription elongation by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955583 621380 635595 - 102016764 AGCD01075842;AGCD01075843;GBBH01092539;XM_005414310;XM_005414312;XM_005414313;XM_013509798 XP_005414367;XP_005414369;XP_005414370;XP_013365252 MODEL 8771879 protein-coding Epn1 epsin 1 ENCODES a protein that exhibits molecular sequestering activity (ortholog); transcription factor binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); clathrin-dependent endocytosis (ortholog); embryonic organ development (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); postsynapse (ortholog) NW_004955567 669333 683283 - 102013769 AGCD01074423;AGCD01074424;GBCE01052885;GBCQ01011760;XM_005413292 XP_005413349 MODEL 8883750 pseudo LOC102008560 cell division control protein 42 homolog pseudogene NW_004955430 16590042 16591833 - 102008560 AGCD01029642 MODEL 39133487 snrna U4 U4 spliceosomal RNA 8837231 protein-coding Rcan3 RCAN family member 3 ENCODES a protein that exhibits phosphatase binding (ortholog); troponin I binding (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955452 4285602 4313904 + 102028372 AGCD01043970;AGCD01043971;GBCE01108458;GBDJ01062277;XM_013519579 XP_013375033 MODEL 8804840 protein-coding Rap1b RAP1B, member of RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cell population proliferation (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN anchoring junction (ortholog); cell-cell junction (ortholog); cytosol (ortholog) NW_004955458 15110709 15121868 + 102005445 AGCD01047864;GBDK01005189;XM_013520897 XP_013376351 MODEL 8789084 protein-coding Rrp1 ribosomal RNA processing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955407 41456291 41466040 - 102004040 AGCD01007866;AGCD01007867;GBCB01040692;XM_005375882 XP_005375939 MODEL 8749467 protein-coding Rpe ribulose-5-phosphate-3-epimerase ENCODES a protein that exhibits carbohydrate binding (ortholog); D-ribulose-phosphate 3-epimerase activity (ortholog); identical protein binding (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); pentose-phosphate shunt (ortholog); pentose-phosphate shunt, non-oxidative branch (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - non-oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955457 5425532 5441538 - 102029369 AGCD01046818;GBDK01361133;XM_005396947;XM_013520676;XM_013520677;XM_013520678;XM_013520679;XM_013520680;XM_013520681;XM_013520682 XP_005397004;XP_013376130;XP_013376131;XP_013376132;XP_013376133;XP_013376134;XP_013376135;XP_013376136 MODEL 8776015 protein-coding Tram1l1 translocation associated membrane protein 1 like 1 NW_004955428 22645718 22647763 + 102027208 AGCD01028192;GBBH01122847;GBCE01049874;XM_005386808 XP_005386865 MODEL 8828715 ncrna LOC102005921 uncharacterized LOC102005921 NW_004955468 5830269 5849954 + 102005921 AGCD01051978;GBDF01113513;XR_263392 MODEL 8877149 pseudo LOC102011265 E3 ubiquitin-protein ligase RNF13 pseudogene NW_004955450 12920957 12924698 - 102011265 AGCD01042721 MODEL 8761180 protein-coding Wdr26 WD repeat domain 26 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); craniosynostosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955520 950505 983963 + 102006813 AGCD01068039;GBBH01167150;GBDF01044046;XM_005409219;XM_013507050 XP_005409276;XP_013362504 MODEL 9010106 protein-coding Timp2 TIMP metallopeptidase inhibitor 2 ENCODES a protein that exhibits enzyme activator activity (ortholog); integrin binding (ortholog); metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of mitotic cell cycle (ortholog); negative regulation of proteolysis (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); Brain Injuries (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); extracellular region (ortholog) NW_004955506 3769113 3812896 + 102029096 AGCD01065319;GBCE01002810;XM_005407364 XP_005407421 MODEL 8826588 protein-coding Rgs4 regulator of G protein signaling 4 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN dorsal root ganglion development (ortholog); negative regulation of cell growth involved in cardiac muscle cell development (ortholog); negative regulation of dopamine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; calcium signaling pathway via the calcium-sensing receptor; dopamine signaling pathway via D1 family of receptors; ASSOCIATED WITH alcohol dependence (ortholog); bladder disease (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955462 13340812 13347598 - 102009474 AGCD01049425;GBCQ01144636;XM_005398260;XM_005398261 XP_005398317;XP_005398318 MODEL 8803685 protein-coding Srl sarcalumenin INVOLVED IN response to muscle activity involved in regulation of muscle adaptation (ortholog); store-operated calcium entry (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Rubinstein-Taybi syndrome (ortholog) NW_004955442 13200237 13242816 + 102016642 AGCD01037765;AGCD01037766;GBCB01003803;XM_005391314;XM_005391315 XP_005391371;XP_005391372 MODEL 8822301 protein-coding Snx30 sorting nexin family member 30 INVOLVED IN positive regulation of autophagosome assembly (ortholog); protein transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog) NW_004955419 14567317 14645442 - 102028419 AGCD01020029;AGCD01020030;AGCD01020031;AGCD01020032;GBDJ01369598;XM_005382931 XP_005382988 MODEL 39131381 protein-coding SELE selectin E 39131957 snrna U2 U2 spliceosomal RNA 39134512 ribozyme RNaseP_nuc Nuclear RNase P 10201634 protein-coding LOC106147454 olfactory receptor 7G3-like NW_004955563 330116 331045 - 106147454 AGCD01074061;XM_013509123 XP_013364577 MODEL 8787961 protein-coding Ptpa protein phosphatase 2 phosphatase activator ENCODES a protein that exhibits ATP binding (ortholog); phosphatase binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Disease Progression (ortholog); FOUND IN ATPase complex (ortholog); calcium channel complex (ortholog); cytoplasm (ortholog) NW_004955570 1429316 1454820 + 102015788 AGCD01074814;GBDI01022159;XM_005413611 XP_005413668 MODEL 626189143 snorna SNORA57 Small nucleolar RNA SNORA57 9002952 pseudo LOC102007410 non-histone chromosomal protein HMG-14 pseudogene NW_004955459 7208563 7208865 + 102007410 AGCD01048098 MODEL 8923267 protein-coding LOC102005563 chromosome unknown open reading frame, human C5orf52 ASSOCIATED WITH colorectal cancer (ortholog); lung cancer (ortholog) NW_004955455 4906038 4911269 + 102005563 AGCD01045705;GBDF01215498;XM_013520307 XP_013375761 MODEL 730469280 snorna SNORD103 Small nucleolar RNA SNORD103/SNORD85 8797419 protein-coding LOC102004879 lysozyme C NW_004957064 526 1868 - 102004879 AGCD01080460;GBCE01006950;GBDK01017882;XM_005415221 XP_005415278 MODEL 8838941 protein-coding LOC102010107 protein bunched, class 1/class 3/D/E isoforms-like NW_004955573 470280 471584 + 102010107 AGCD01074980;AGCD01074981;GBDF01228221;XM_005413775 XP_005413832 MODEL 9056957 protein-coding LOC102005923 apolipoprotein L3-like NW_004955413 22422434 22450771 - 102005923 AGCD01014300;AGCD01014301;AGCD01014302;GBBH01182541;XM_005379647 XP_005379704 MODEL 8931510 protein-coding Plekhm3 pleckstrin homology domain containing M3 INVOLVED IN myoblast differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955457 7065443 7239663 + 102008701 AGCD01046868;AGCD01046869;AGCD01046870;AGCD01046871;AGCD01046872;AGCD01046873;AGCD01046874;GBBH01021390;XM_005396971;XM_005396973;XM_005396974 XP_005397028;XP_005397030;XP_005397031 MODEL 8822598 pseudo LOC102011274 translocation protein SEC62 pseudogene NW_004955453 11024593 11120561 + 102011274 AGCD01044797;AGCD01044798;AGCD01044799;AGCD01044800 MODEL 8764256 pseudo LOC102008936 glycoprotein endo-alpha-1,2-mannosidase pseudogene NW_004955414 9246135 9247353 + 102008936 AGCD01015014 MODEL 9019314 pseudo LOC102006259 programmed cell death protein 5 pseudogene NW_004955502 7085665 7086085 - 102006259 AGCD01064429;XM_005406906 MODEL 8720484 protein-coding Spdl1 spindle apparatus coiled-coil protein 1 ENCODES a protein that exhibits enzyme binding (ortholog); kinetochore binding (ortholog); INVOLVED IN cell migration (ortholog); establishment of mitotic spindle orientation (ortholog); mitotic metaphase chromosome alignment (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog); outer kinetochore (ortholog); spindle pole (ortholog) NW_004955408 22590474 22619168 + 102013477 AGCD01008578;GBDF01223309;XM_005376306;XM_005376307;XM_005376308 XP_005376363;XP_005376364;XP_005376365 MODEL 10264762 ncrna LOC106150350 uncharacterized LOC106150350 NW_004955474 6477484 6487122 - 106150350 AGCD01054479;AGCD01054480;GBCQ01029606;XR_001237118;XR_001237119 MODEL 9046931 protein-coding Pithd1 PITH domain containing 1 INVOLVED IN penetration of cumulus oophorus (ortholog); penetration of zona pellucida (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); sperm cytoplasmic droplet (ortholog) NW_004955452 3696632 3708166 + 102021078 AGCD01043935;AGCD01043936;GBCE01152531;XM_005394782 XP_005394839 MODEL 39133587 snrna U2 U2 spliceosomal RNA 8864407 protein-coding C1galt1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 ENCODES a protein that exhibits N-acetylgalactosaminide beta-1,3-galactosyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); intestinal epithelial cell development (ortholog); kidney development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN membrane (ortholog) NW_004955432 14298873 14353824 + 102025281 AGCD01031042;GBBH01190693;XM_005388090 XP_005388147 MODEL 8955422 protein-coding Polh DNA polymerase eta ENCODES a protein that exhibits DNA polymerase activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN cellular response to UV-C (ortholog); DNA damage tolerance (ortholog); DNA synthesis involved in DNA repair (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 9392484 9409186 + 102020609 AGCD01034528;AGCD01034529;GBDF01124027;GBDK01171313;XM_013516824;XM_013516825;XM_013516826 XP_013372278;XP_013372279;XP_013372280 MODEL 8922090 protein-coding LOC102004123 CMRF35-like molecule NW_004955553 1403860 1424555 - 102004123 AGCD01072881;XM_013508611 XP_013364065 MODEL 8973994 protein-coding Ppp1r11 protein phosphatase 1 regulatory inhibitor subunit 11 ENCODES a protein that exhibits phosphatase binding (ortholog); protein phosphatase inhibitor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); negative regulation of cytokine production (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955583 198233 201312 + 102011259 AGCD01075802;GBDF01007793;XM_005414297 XP_005414354 MODEL 9025490 protein-coding Sfswap splicing factor SWAP INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); mRNA 5'-splice site recognition (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955482 808684 871377 - 102026112 AGCD01057189;GBDI01121728;XM_005402976;XM_005402977;XM_005402978;XM_005402980;XM_005402981;XM_005402983;XM_005402984 XP_005403033;XP_005403034;XP_005403035;XP_005403037;XP_005403038;XP_005403040;XP_005403041 MODEL 8927721 ncrna LOC102022402 uncharacterized LOC102022402 NW_004955423 16824211 16829887 + 102022402 AGCD01023839;GBDF01074436;XR_001234119;XR_260973 MODEL 9041799 protein-coding LOC102012087 interferon-induced very large GTPase 1-like NW_004955414 22472329 22477687 - 102012087 AGCD01015457;XM_005380508 XP_005380565 MODEL 9031305 protein-coding LOC102018305 melanoma-associated antigen 8-like NW_004955498 2272824 2273840 + 102018305 AGCD01062779;XM_005406469 XP_005406526 MODEL 8784296 ncrna LOC102011725 uncharacterized LOC102011725 NW_004955404 11149721 11163056 - 102011725 AGCD01003414;AGCD01003415;GBDF01148811;XR_259301 MODEL 8860117 protein-coding Slc35e3 solute carrier family 35 member E3 ASSOCIATED WITH high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955458 15216365 15231584 + 102011090 AGCD01047877;AGCD01047878;AGCD01047879;AGCD01047880;GBDF01225604;GBDK01319316;XM_013520900 XP_013376354 MODEL 8775747 pseudo LOC102013305 calcyclin-binding protein pseudogene NW_004955492 8003860 8004552 + 102013305 AGCD01060807 MODEL 626189195 snorna SNORD60 Small nucleolar RNA SNORD60 8866341 protein-coding LOC102008192 60S ribosomal protein L37a-like NW_004955458 10729549 10729854 - 102008192 AGCD01047704;XM_005397532 XP_005397589 MODEL 8993566 protein-coding LOC102016351 olfactory receptor 10A4-like NW_004955458 2463382 2464346 - 102016351 AGCD01047233;XM_013520866 XP_013376320 MODEL 9011573 ncrna LOC102003096 uncharacterized LOC102003096 NW_004955458 14817424 14818448 + 102003096 AGCD01047848;GBDF01118725;XR_262998 MODEL 8825582 protein-coding Prtfdc1 phosphoribosyl transferase domain containing 1 ENCODES a protein that exhibits hypoxanthine phosphoribosyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN GMP catabolic process (ortholog); guanine salvage (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955429 4234806 4325896 + 102007140 AGCD01028484;AGCD01028485;AGCD01028486;AGCD01028487;GBCQ01013640;XM_005386898 XP_005386955 MODEL 9025581 protein-coding Rap1gap RAP1 GTPase activating protein ENCODES a protein that exhibits GTPase activator activity (ortholog); protein homodimerization activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to glial cell derived neurotrophic factor (ortholog); negative regulation of microvillus assembly (ortholog); negative regulation of neuron differentiation (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955452 1886557 1950942 - 102029817 AGCD01043869;AGCD01043870;GBDI01071245;XM_013519605;XM_013519606;XM_013519607;XR_001236073;XR_001236074;XR_001236075;XR_001236076;XR_001236077;XR_001236078;XR_001236079;XR_001236080 XP_013375059;XP_013375060;XP_013375061 MODEL 730469302 snorna SNORA40 Small nucleolar RNA SNORA40 8787777 gene LOC102010877 T-cell receptor alpha chain V region HPB-MLT-like NW_004955409 38439384 38453331 - 102010877 AGCD01010560;XR_259812 MODEL 8939024 pseudo LOC102019863 ferritin light chain pseudogene NW_004955568 7500 20509 - 102019863 AGCD01074499 MODEL 8887793 protein-coding Timp3 TIMP metallopeptidase inhibitor 3 INVOLVED IN cellular response to hypoxia (ortholog); cellular response to interleukin-6 (ortholog); cellular response to peptide (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; ASSOCIATED WITH asthma (ortholog); bladder disease (ortholog); breast cancer (ortholog); FOUND IN basement membrane (ortholog) NW_004955405 41613976 41655813 + 102003311 AGCD01005557;GBCE01004412;XM_005374652 XP_005374709 MODEL 8778194 protein-coding Rgs5 regulator of G protein signaling 5 INVOLVED IN negative regulation of vascular associated smooth muscle cell proliferation (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH colorectal adenocarcinoma (ortholog); essential hypertension (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955462 13228110 13288063 + 102008706 AGCD01049422;AGCD01049423;GBDF01305569;XM_005398257;XM_005398258 XP_005398314;XP_005398315 MODEL 8758313 protein-coding Prkcb protein kinase C beta ENCODES a protein that exhibits calcium channel regulator activity (ortholog); calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); chromatin binding (ortholog); INVOLVED IN B cell activation (ortholog); B cell receptor signaling pathway (ortholog); calcium ion transport (ortholog); PARTICIPATES IN insulin signaling pathway; interleukin-2 signaling pathway; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); Alzheimer's disease (ortholog); FOUND IN brush border membrane (ortholog); calyx of Held (ortholog); centrosome (ortholog) NW_004955493 2395494 2710522 + 102015323 AGCD01060951;AGCD01060952;AGCD01060953;AGCD01060954;AGCD01060955;AGCD01060956;AGCD01060957;AGCD01060958;AGCD01060959;AGCD01060960;AGCD01060961;GBDI01025873;XM_005405341 XP_005405398 MODEL 8913787 protein-coding Phf14 PHD finger protein 14 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN germinal center B cell differentiation (ortholog); lung alveolus development (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955432 17535222 17807106 + 102030462 AGCD01031127;AGCD01031128;AGCD01031129;GBCQ01064031;XM_013515963;XM_013515964;XM_013515965;XM_013515966;XM_013515967;XM_013515968;XM_013515969;XM_013515970;XM_013515971;XM_013515972;XM_013515973;XM_013515974;XM_013515975;XM_013515976;XM_013515977;XM_013515978;XM_013515979;XM_013515980;XR_001234651 XP_013371417;XP_013371418;XP_013371419;XP_013371420;XP_013371421;XP_013371422;XP_013371423;XP_013371424;XP_013371425;XP_013371426;XP_013371427;XP_013371428;XP_013371429;XP_013371430;XP_013371431;XP_013371432;XP_013371433;XP_013371434 MODEL 8798793 protein-coding Srm spermidine synthase ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); spermidine synthase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); response to testosterone (ortholog); spermidine biosynthetic process (ortholog); PARTICIPATES IN glycine N-methyltransferase deficiency pathway; homocystinuria pathway; hypermethioninemia pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955486 2631579 2634779 + 102020015 AGCD01059001;GBDF01048561;GBDJ01081417;XM_005404304 XP_005404361 MODEL 730469443 snorna SNORA58 Small nucleolar RNA SNORA58 10216673 protein-coding LOC106147455 putative methyl-CpG-binding domain protein 3-like 5 NW_004955563 649052 650756 + 106147455 AGCD01074072;XM_013509127 XP_013364581 MODEL 8874983 protein-coding Ptpdc1 protein tyrosine phosphatase domain containing 1 INVOLVED IN cilium assembly (ortholog); smoothened signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog) NW_004955515 3912495 4044999 + 102021161 AGCD01067307;AGCD01067308;AGCD01067309;AGCD01067310;AGCD01067311;AGCD01067312;AGCD01067313;GBDF01081967;XM_005408888;XM_005408890;XM_005408891;XM_005408892;XM_005408894 XP_005408945;XP_005408947;XP_005408948;XP_005408949;XP_005408951 MODEL 8737893 protein-coding C1galt1c1 C1GALT1 specific chaperone 1 ENCODES a protein that exhibits N-acetylgalactosaminide beta-1,3-galactosyltransferase activity (ortholog); INVOLVED IN platelet activation (ortholog); platelet morphogenesis (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH HEMOLYTIC UREMIC SYNDROME, ATYPICAL, 8, WITH RHIZOMELIC SHORT STATURE (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955572 1254289 1258561 + 102030253 AGCD01074947;GBBH01193344;XM_005413651 XP_005413708 MODEL 8898873 trna Trnag-ucc transfer RNA glycine (anticodon UCC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955568;NW_004955462;NW_004955467;NW_004955495 59658;14719232;8709239;4280962 59729;14719303;8709310;4281033 -;-;-;- 101978845 AGCD01049456;AGCD01051466;AGCD01061910;AGCD01074502 MODEL 8875810 ncrna LOC102019514 uncharacterized LOC102019514 NW_004955427 11862404 11900128 + 102019514 AGCD01027195;AGCD01027196;AGCD01027197;GBCQ01186668;XR_001234347;XR_261253 MODEL 8903922 ncrna LOC102008561 uncharacterized LOC102008561 NW_004955432 20882075 20884968 - 102008561 AGCD01031209;AGCD01031210;XR_261538 MODEL 8907186 protein-coding Snx31 sorting nexin 31 ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955417 15779500 15835668 - 102018494 AGCD01018243;GBCE01074372;XM_005381870;XM_013512837;XM_013512838 XP_005381927;XP_013368291;XP_013368292 MODEL 39133488 snrna U4 U4 spliceosomal RNA 8845698 protein-coding Plekhn1 pleckstrin homology domain containing N1 ENCODES a protein that exhibits cardiolipin binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylinositol phosphate binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); positive regulation of apoptotic process (ortholog); response to hypoxia (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN cytoskeleton (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955486 9736801 9744659 - 102011126 AGCD01059198;GBDJ01386505;XM_005404287;XM_005404288 XP_005404344;XP_005404345 MODEL 8957780 protein-coding Epn2 epsin 2 INVOLVED IN embryonic organ development (ortholog); in utero embryonic development (ortholog); negative regulation of sprouting angiogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN clathrin coat of endocytic vesicle (ortholog); cytoplasm (ortholog); postsynaptic endocytic zone (ortholog) NW_004955467 419342 505909 - 102003745 AGCD01051219;AGCD01051220;AGCD01051221;AGCD01051222;AGCD01051223;GBCB01023639;XM_005399274;XM_005399276;XM_005399277 XP_005399331;XP_005399333;XP_005399334 MODEL 730469292 snorna SNORA17 Small nucleolar RNA SNORA17 8786155 protein-coding LOC102006262 60S acidic ribosomal protein P1-like NW_004955506 3889447 3890523 - 102006262 AGCD01065321;XM_005407374;XM_005407375 XP_005407431;XP_005407432 MODEL 8850335 protein-coding Rcbtb1 RCC1 and BTB domain containing protein 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog) NW_004955431 2976283 3080665 - 102026031 AGCD01029944;AGCD01029945;AGCD01029946;GBDI01218100;XM_005387595;XM_005387596;XM_005387597;XM_013515750 XP_005387652;XP_005387653;XP_005387654;XP_013371204 MODEL 8832126 pseudo LOC102005565 histone-binding protein RBBP4-B-like NW_004955407 19026615 19027887 - 102005565 AGCD01007294 MODEL 8954432 protein-coding Rpe65 retinoid isomerohydrolase RPE65 ENCODES a protein that exhibits all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity (ortholog); all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming activity (ortholog); isomerase activity (ortholog); INVOLVED IN camera-type eye development (ortholog); cellular response to electrical stimulus (ortholog); circadian rhythm (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); basal cell carcinoma (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955423 23184326 23208206 + 102012870 AGCD01023995;GBDF01013721;XM_005385268 XP_005385325 MODEL 8787266 protein-coding Rrp12 ribosomal RNA processing 12 homolog PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); plasma membrane (ortholog) NW_004955507 3520971 3554373 - 102023938 AGCD01065629;AGCD01065630;GBDF01125834;XM_005407598 XP_005407655 MODEL 730469392 snorna SNORD103 Small nucleolar RNA SNORD103/SNORD85 8942378 protein-coding Wdr27 WD repeat domain 27 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955411 3928775 4123191 + 102021105 AGCD01011562;AGCD01011563;AGCD01011564;AGCD01011565;AGCD01011566;AGCD01011567;AGCD01011568;AGCD01011569;AGCD01011570;AGCD01011571;GBDK01107452;XM_013510744;XM_013510746;XM_013510747;XM_013510748;XM_013510749;XM_013510750 XP_013366198;XP_013366200;XP_013366201;XP_013366202;XP_013366203;XP_013366204 MODEL 8820691 protein-coding Poli DNA polymerase iota ENCODES a protein that exhibits DNA polymerase activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN cellular response to UV-C (ortholog); translesion synthesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955402 38866528 38891235 + 102024741 AGCD01000971;GBDI01226624;XM_013510810;XM_013510820 XP_013366264;XP_013366274 MODEL 8890509 pseudo LOC102012089 serine racemase pseudogene NW_004955475 6283187 6284059 - 102012089 AGCD01054958 MODEL 8810586 pseudo LOC102016356 proteasome activator complex subunit 3 pseudogene NW_004955462 14428091 14429472 - 102016356 AGCD01049446;XM_005398285 MODEL 8978359 protein-coding LOC102010109 olfactory receptor 1D2-like NW_004955580 1150676 1151682 - 102010109 AGCD01075649;XM_005414224 XP_005414281 MODEL 8839537 protein-coding Selenbp1 selenium binding protein 1 ENCODES a protein that exhibits methanethiol oxidase activity (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955588 703928 713941 - 102003505 AGCD01076118;GBDK01013351;XM_005414518;XM_013509926 XP_005414575;XP_013365380 MODEL 8949400 protein-coding LOC102013310 regenerating islet-derived protein 3-beta-like NW_004955424 7346797 7348894 + 102013310 AGCD01024435;GBDF01033597;XM_005385457;XM_005385458 XP_005385514;XP_005385515 MODEL 8839928 pseudo LOC102011280 probable methyltransferase-like protein 15 NW_004955457 7384810 7385987 - 102011280 AGCD01046877 MODEL 39134225 ribozyme RNaseP_nuc Nuclear RNase P 8976325 protein-coding Prtg protogenin ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN negative regulation of neurogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955409 309885 405667 + 102019893 AGCD01009142;AGCD01009143;AGCD01009144;GBCE01179538;GBDF01074670;XM_013510014 XP_013365468 MODEL 10236602 ncrna LOC106150351 uncharacterized LOC106150351 NW_004955474 6774840 6777950 - 106150351 AGCD01054494;GBCQ01123458;XR_001237120 MODEL 8767738 protein-coding Spdya speedy/RINGO cell cycle regulator family member A ENCODES a protein that exhibits protein kinase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN DNA damage response (ortholog); establishment of protein localization to telomere (ortholog); G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); endoplasmic reticulum exit site (ortholog); nuclear envelope (ortholog) NW_004955469 10687519 10744808 + 102014767 AGCD01052545;AGCD01052546;AGCD01052547;AGCD01052548;AGCD01052549;GBDF01279718;XM_005400534;XM_005400535;XM_013522619 XP_005400591;XP_005400592;XP_013378073 MODEL 39133590 snrna U2 U2 spliceosomal RNA 8890232 protein-coding Timp4 TIMP metallopeptidase inhibitor 4 INVOLVED IN Notch signaling pathway (ortholog); ovulation cycle (ortholog); response to cytokine (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Arteriovenous Fistula (ortholog); Breast Neoplasms (ortholog); FOUND IN extracellular region (ortholog); sarcomere (ortholog) NW_004955429 14689016 14693211 - 102017362 AGCD01028784;GBDI01354181;XM_005387015 XP_005387072 MODEL 8922426 ncrna LOC102004127 uncharacterized LOC102004127 NW_004955444 9443882 9445901 - 102004127 AGCD01038970;XR_262255 MODEL 8917607 protein-coding Pitpna phosphatidylinositol transfer protein alpha ENCODES a protein that exhibits fatty-acyl-CoA binding (ortholog); lipid binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN axonogenesis (ortholog); phospholipid transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chylomicron retention disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955481 1611579 1649481 + 102020115 AGCD01056838;AGCD01056839;AGCD01056840;GBDF01118413;XM_005402620 XP_005402677 MODEL 9044335 protein-coding Srms src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites ENCODES a protein that exhibits protein tyrosine kinase activity (ortholog); INVOLVED IN positive regulation of TORC1 signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955528 677332 685903 + 102009417 AGCD01069541;AGCD01069542;GBCE01020325;GBDF01290895;XM_013507512 XP_013362966 MODEL 8763459 protein-coding Ptpmt1 protein tyrosine phosphatase mitochondrial 1 ENCODES a protein that exhibits phosphatidylglycerophosphatase activity (ortholog); phosphatidylinositol-5-phosphate phosphatase activity (ortholog); INVOLVED IN cardiolipin biosynthetic process (ortholog); mitochondrial fragmentation involved in apoptotic process (ortholog); negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN cardiolipin biosynthetic pathway; glycerophospholipid metabolic pathway; inositol metabolic pathway; ASSOCIATED WITH Neurodevelopmental disorder with ataxia and brain abnormalities (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955422 723236 724761 - 102007132 AGCD01022432;GBBH01076389;GBCQ01018067;XM_005384942 XP_005384999 MODEL 8807676 protein-coding Ppp1r12a protein phosphatase 1 regulatory subunit 12A ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); enzyme inhibitor activity (ortholog); phosphatase regulator activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); centrosome cycle (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); genetic disease (ortholog); FOUND IN A band (ortholog); actin cytoskeleton (ortholog); centrosome (ortholog) NW_004955405 18594191 18727345 - 102019767 AGCD01005022;AGCD01005023;AGCD01005024;AGCD01005025;GBDJ01073959;XM_005374361;XM_005374363;XM_013517866;XM_013517875;XM_013517877;XM_013517885;XM_013517896;XM_013517904;XM_013517907 XP_005374418;XP_005374420;XP_013373320;XP_013373329;XP_013373331;XP_013373339;XP_013373350;XP_013373358;XP_013373361 MODEL 8812191 pseudo LOC102018311 olfactory receptor 8K3-like NW_004955511 1346191 1347156 + 102018311 AGCD01066365 MODEL 730469268 snorna SNORD60 Small nucleolar RNA SNORD60 8751583 ncrna LOC102003099 uncharacterized LOC102003099 NW_004955462 10959270 10994353 - 102003099 AGCD01049379;AGCD01049380;GBDF01082820;XR_001236594;XR_263124;XR_263125;XR_263126 MODEL 8880558 protein-coding LOC102008193 uncharacterized LOC102008193 NW_004955409 10334641 10336946 - 102008193 AGCD01009464;GBDK01043622;XM_005376774;XM_005376775 XP_005376831;XP_005376832 MODEL 9050958 ncrna LOC102004883 uncharacterized LOC102004883 NW_004955404 21351961 21500830 + 102004883 AGCD01003725;AGCD01003726;AGCD01003727;GBDF01028560;XR_259320 MODEL 8968487 protein-coding Slc35e4 solute carrier family 35 member E4 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955455 4853632 4863617 + 102025539 AGCD01045696;GBCQ01129341;XM_005396278 XP_005396335 MODEL 8823190 protein-coding LOC102005927 olfactory receptor 52A5-like NW_004955414 21125400 21126350 - 102005927 AGCD01015407;XM_005380494 XP_005380551 MODEL 730469326 snorna SNORA40 Small nucleolar RNA SNORA40 8718506 pseudo LOC102010880 methylcrotonoyl-CoA carboxylase beta chain, mitochondrial pseudogene NW_004955410 29866734 29868389 - 102010880 AGCD01011297 MODEL 8809439 pseudo LOC102019864 uncharacterized LOC102019864 NW_004955445 529643 552759 - 102019864 AGCD01039319 MODEL 8925446 ncrna LOC102007414 uncharacterized LOC102007414 NW_004955410 36159193 36161406 - 102007414 AGCD01011421;GBDF01176606;XR_259905 MODEL 8728227 protein-coding LOC102008939 probable E3 ubiquitin-protein ligase HERC6 NW_004955474 12079119 12140769 - 102008939 AGCD01054648;AGCD01054649;AGCD01054650;GBDK01319254;XM_013502713 XP_013358167 MODEL 8865952 protein-coding LOC102019525 melanoma-associated antigen B3-like NW_004955531 780560 788753 + 102019525 AGCD01070011;AGCD01070012;XM_005410136 XP_005410193 MODEL 9006776 protein-coding Rap1gap2 RAP1 GTPase activating protein 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); regulation of cell size (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955481 296411 537490 - 102029741 AGCD01056784;AGCD01056785;AGCD01056786;AGCD01056787;AGCD01056788;AGCD01056789;AGCD01056790;AGCD01056791;AGCD01056792;GBDF01189289;JN235985;XM_005402558;XM_005402559;XM_005402561;XM_013503470;XM_013503472;XM_013503473;XM_013503475;XM_013503476;XM_013503477;XM_013503478;XM_013503479;XM_013503480;XM_013503481;XM_013503482;XM_013503483;XM_013503484;XR_263755;XR_263756 AEO17026;XP_005402615;XP_005402616;XP_005402618;XP_013358924;XP_013358926;XP_013358927;XP_013358929;XP_013358930;XP_013358931;XP_013358932;XP_013358933;XP_013358934;XP_013358935;XP_013358936;XP_013358937;XP_013358938 MODEL 8704333 ncrna LOC102011284 uncharacterized LOC102011284 NW_004955460 12592756 12593305 - 102011284 AGCD01048661;GBDF01041740;XR_263061 MODEL 8721643 protein-coding Rgs6 regulator of G protein signaling 6 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN positive regulation of neuron differentiation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; ASSOCIATED WITH alcohol dependence (ortholog); lung cancer (ortholog); morphine dependence (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955523 2763143 3366851 - 102004846 AGCD01068588;AGCD01068589;AGCD01068590;AGCD01068591;AGCD01068592;AGCD01068593;AGCD01068594;AGCD01068595;AGCD01068596;AGCD01068597;AGCD01068598;AGCD01068599;AGCD01068600;AGCD01068601;AGCD01068602;AGCD01068603;AGCD01068604;AGCD01068605;GBDJ01403741;XM_005409440;XM_005409442;XM_005409443;XM_013507178 XP_005409497;XP_005409499;XP_005409500;XP_013362632 MODEL 8812392 protein-coding Snx33 sorting nexin 33 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cleavage furrow formation (ortholog); endocytosis (ortholog); endosomal transport (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955450 2669993 2682503 - 102025744 AGCD01042393;AGCD01042394;GBCQ01127590;XM_005393502 XP_005393559 MODEL 8876856 protein-coding Sft2d1 SFT2 domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog) NW_004955439 15555080 15575698 + 102027115 AGCD01036004;GBBH01064219;XM_005390657 XP_005390714 MODEL 8747958 protein-coding LOC102022405 spindle and kinetochore-associated protein 2 NW_004955496 100810 101511 - 102022405 AGCD01062221;XM_013505375 XP_013360829 MODEL 626189172 snorna SNORA58 Small nucleolar RNA SNORA58 8782846 protein-coding Plekho1 pleckstrin homology domain containing O1 INVOLVED IN lamellipodium morphogenesis (ortholog); myoblast fusion (ortholog); myoblast migration (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); muscle cell projection membrane (ortholog) NW_004955413 603011 606487 - 102012525 AGCD01013481;GBDF01000598;GBDK01001593;XM_013511531 XP_013366985 MODEL 8948582 pseudo LOC102005569 UDP-N-acetylhexosamine pyrophosphorylase pseudogene NW_004955458 8136442 8138154 - 102005569 AGCD01047600 MODEL 8871233 pseudo LOC102011727 GTP:AMP phosphotransferase AK3, mitochondrial-like NW_004955404 141224 156690 - 102011727 AGCD01003197 MODEL 8730836 protein-coding Wdr3 WD repeat domain 3 INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); small-subunit processome (ortholog) NW_004955435 21038053 21069213 + 102012798 AGCD01033468;GBCE01085305;XM_005389069;XM_005389070 XP_005389126;XP_005389127 MODEL 9021807 protein-coding Rpf1 ribosome production factor 1 homolog ENCODES a protein that exhibits RNA binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955423 9394780 9412001 - 102003036 AGCD01023658;GBDK01345208;XM_005385160;XM_013514435 XP_005385217;XP_013369889 MODEL 8745953 protein-coding Tram2 translocation associated membrane protein 2 INVOLVED IN collagen biosynthetic process (ortholog); protein insertion into ER membrane (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955411 5598612 5620685 + 102028508 AGCD01011652;AGCD01011653;AGCD01011654;GBBH01091491;XM_005377655 XP_005377712 MODEL 9050733 protein-coding Phf19 PHD finger protein 19 ENCODES a protein that exhibits histone H3K36me3 reader activity (ortholog); histone H3K4me3 reader activity (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); negative regulation of gene expression, epigenetic (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN ESC/E(Z) complex (ortholog); nucleus (ortholog) NW_004955419 7160249 7179323 + 102024678 AGCD01019875;GBCB01002322;GBDI01260665;XM_005382592 XP_005382649 MODEL 9034611 protein-coding Epn3 epsin 3 ENCODES a protein that exhibits EH domain binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); diastolic heart failure (ortholog); lung cancer (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955451 11209454 11218427 - 102011935 AGCD01043342;GBBH01089702;XM_013519085;XM_013519086;XM_013519088;XM_013519089;XM_013519090 XP_013374539;XP_013374540;XP_013374542;XP_013374543;XP_013374544 MODEL 9064278 pseudo LOC102006264 nucleophosmin pseudogene NW_004955511 3225794 3227751 + 102006264 AGCD01066450 MODEL 10262069 protein-coding LOC106147457 putative gustatory receptor clone PTE03 NW_004955563 339803 340762 - 106147457 AGCD01074062;XM_013509131 XP_013364585 MODEL 8916014 protein-coding Spdye1 speedy/RINGO cell cycle regulator family member E1 ASSOCIATED WITH colorectal cancer (ortholog); esophageal cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955460 10914 53605 - 102009694 AGCD01048326;AGCD01048327;AGCD01048328;AGCD01048329;AGCD01048330;AGCD01048331;GBDF01051973;XM_005397708;XM_013521294;XM_013521295 XP_005397765;XP_013376748;XP_013376749 MODEL 8864402 protein-coding C1galt1c1l C1GALT1 specific chaperone 1 like NW_004955441 10846009 10847263 - 102024854 AGCD01037095;GBDI01279325;XM_005390923 XP_005390980 MODEL 9015091 protein-coding Rrp15 ribosomal RNA processing 15 homolog ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); esophageal cancer (ortholog) NW_004955406 260447 295842 - 102006738 AGCD01005614;GBCB01024197;XM_005374704 XP_005374761 MODEL 8728967 ncrna LOC102011728 uncharacterized LOC102011728 NW_004955405 4802647 4833270 - 102011728 AGCD01004653;AGCD01004654;AGCD01004655;GBDF01208522;XR_001235207;XR_259362 MODEL 9060023 pseudo LOC102008195 40S ribosomal protein S14 pseudogene NW_004955409 22320691 22321337 + 102008195 AGCD01010034 MODEL 9047211 pseudo LOC102003102 HAUS augmin-like complex subunit 8 NW_004955464 11500987 11501958 - 102003102 AGCD01050155 MODEL 8852330 ncrna LOC102004884 uncharacterized LOC102004884 NW_004955452 4504172 4505457 - 102004884 AGCD01043984;GBCQ01086582;XR_262651 MODEL 9007949 ncrna LOC102018312 uncharacterized LOC102018312 NW_004955430 19090204 19090891 + 102018312 AGCD01029707;GBDF01190178;XR_261433 MODEL 8921970 protein-coding Selenof selenoprotein F ENCODES a protein that exhibits selenium binding (ortholog); thioredoxin-dependent peroxiredoxin activity (ortholog); INVOLVED IN response to lipopolysaccharide (ortholog); sperm DNA condensation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) NW_004955423 7253980 7285442 + 102019820 AGCD01023596;GBDF01050322;XM_005385122 XP_005385179 MODEL 9033515 protein-coding Prkcd protein kinase C delta ENCODES a protein that exhibits calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); diacylglycerol-dependent, calcium-independent serine/threonine kinase activity (ortholog); enzyme activator activity (ortholog); INVOLVED IN apoptotic process (ortholog); B cell proliferation (ortholog); cell chemotaxis (ortholog); PARTICIPATES IN ceramide signaling pathway; eicosanoid signaling pathway; endothelin signaling pathway; ASSOCIATED WITH autoimmune lymphoproliferative syndrome type 3 (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955430 3125066 3151857 + 102029544 AGCD01029192;AGCD01029193;GBDI01068073;XM_005387365;XM_013515681;XM_013515682 XP_005387422;XP_013371135;XP_013371136 MODEL 8968169 protein-coding LOC102010112 small proline-rich protein 2F-like NW_004955592 331537 332801 + 102010112 AGCD01076304;GBDI01097716;XM_005414612 XP_005414669 MODEL 8780380 protein-coding Ppp1r12b protein phosphatase 1 regulatory subunit 12B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); breast lobular carcinoma (ortholog); FOUND IN A band (ortholog); Z disc (ortholog) NW_004955406 38405297 38636503 + 102024760 AGCD01006601;AGCD01006602;AGCD01006603;AGCD01006604;AGCD01006605;AGCD01006606;AGCD01006607;AGCD01006608;AGCD01006609;GBCB01001973;XM_005375213;XM_005375215;XM_005375216;XM_005375218;XM_005375220;XM_005375223;XM_013522381;XM_013522389;XM_013522394;XM_013522404;XR_001236900;XR_001236901;XR_259519;XR_259520 XP_005375270;XP_005375272;XP_005375273;XP_005375275;XP_005375277;XP_005375280;XP_013377835;XP_013377843;XP_013377848;XP_013377858 MODEL 8896999 protein-coding Wdr31 WD repeat domain 31 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955419 14150881 14168256 + 102024679 AGCD01020013;GBDF01067538;XM_005382681 XP_005382738 MODEL 39134222 ribozyme RNaseP_nuc Nuclear RNase P 730469333 snorna SNORA40 Small nucleolar RNA SNORA40 8847174 pseudo LOC102010891 ras-related protein Rab-43 pseudogene NW_004955413 12621970 12622932 - 102010891 AGCD01013994;XM_005379601 MODEL 39133592 snrna U2 U2 spliceosomal RNA 8801136 protein-coding LOC102007418 olfactory receptor 143-like NW_004955412 25270890 25271828 + 102007418 AGCD01013143;XM_005378419 XP_005378476 MODEL 730469259 snorna SNORD103 Small nucleolar RNA SNORD103/SNORD85 8718368 protein-coding Tinag tubulointerstitial nephritis antigen INVOLVED IN cell adhesion (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN basement membrane (ortholog); non-collagenous component of basement membrane (ortholog) NW_004955411 1718969 1809370 - 102006107 AGCD01011487;AGCD01011488;AGCD01011489;AGCD01011490;GBCQ01040782;XM_005377590;XM_013510703 XP_005377647;XP_013366157 MODEL 730469123 snorna SNORA61 Small nucleolar RNA SNORA61 8719979 protein-coding Srp14 signal recognition particle 14 INVOLVED IN protein targeting to ER (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleus (ortholog); signal recognition particle, endoplasmic reticulum targeting (ortholog) NW_004955416 7006240 7009569 - 102013931 AGCD01016961;GBDJ01001152;XM_005381213 XP_005381270 MODEL 8951897 protein-coding Ptpn1 protein tyrosine phosphatase non-receptor type 1 ENCODES a protein that exhibits enzyme binding (ortholog); ephrin receptor binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to angiotensin (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; insulin signaling pathway; insulin-like growth factor signaling pathway; ASSOCIATED WITH B-cell lymphoma (ortholog); Breast Cancer, Familial (ortholog); Calcification of Aortic Valve (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); early endosome (ortholog) NW_004955445 7754313 7819229 - 102025630 AGCD01039551;AGCD01039552;GBDF01190580;XM_005392314;XM_005392315;XM_005392316 XP_005392371;XP_005392372;XP_005392373 MODEL 9031816 pseudo LOC102016361 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 pseudogene NW_004955465 318026 359135 + 102016361 AGCD01050306;AGCD01050307 MODEL 15036843 trna Trnah-aug transfer RNA histidine(anticodon AUG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978820 10358988 ncrna LOC106147459 uncharacterized LOC106147459 NW_004955563 1613021 1617518 + 106147459 AGCD01074153;GBDK01373082;XR_001232371 MODEL 8774436 pseudo LOC102005928 60S ribosomal protein L30-like NW_004955475 4519787 4520219 + 102005928 AGCD01054881;XR_263612 MODEL 39133489 snrna U4 U4 spliceosomal RNA 8914727 protein-coding Slc35f1 solute carrier family 35 member F1 ASSOCIATED WITH atrial fibrillation (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN synaptic vesicle membrane (ortholog) NW_004955436 1096156 1312183 + 102008885 AGCD01033569;AGCD01033570;AGCD01033571;AGCD01033572;AGCD01033573;AGCD01033574;AGCD01033575;GBDF01183323;XM_005389123 XP_005389180 MODEL 8986579 protein-coding Rpf2 ribosome production factor 2 homolog ENCODES a protein that exhibits 5S rRNA binding (ortholog); INVOLVED IN protein localization to nucleolus (ortholog); regulation of signal transduction by p53 class mediator (ortholog); ribosomal large subunit biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); melanoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955411 35627127 35663903 + 102026196 AGCD01012448;AGCD01012449;AGCD01012450;GBBH01172342;XM_005377895;XM_005377896 XP_005377952;XP_005377953 MODEL 9012435 ncrna LOC102008944 uncharacterized LOC102008944 NW_004955417 25705054 25707401 - 102008944 AGCD01018493;GBCE01099798;XR_260495 MODEL 9062452 protein-coding Prune1 prune exopolyphosphatase 1 ENCODES a protein that exhibits phosphatase activity (ortholog); tubulin binding (ortholog); INVOLVED IN regulation of microtubule polymerization (ortholog); regulation of neurogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); genetic disease (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) NW_004955588 379793 408441 + 102019126 AGCD01076108;AGCD01076109;GBCQ01093042;XM_005414471;XM_013509914;XM_013509915 XP_005414528;XP_013365368;XP_013365369 MODEL 9002549 protein-coding LOC102019866 zinc finger protein 780A NW_004955578 1072644 1089241 + 102019866 AGCD01075508;AGCD01075509;GBCE01092222;XM_005414074;XM_005414075;XM_005414076;XM_005414077;XM_013509660 XP_005414131;XP_005414132;XP_005414133;XP_005414134;XP_013365114 MODEL 8721786 pseudo LOC102011286 mitochondrial import inner membrane translocase subunit Tim9 pseudogene NW_004955410 11964895 11965083 - 102011286 AGCD01010838 MODEL 8909865 protein-coding Pitpnb phosphatidylinositol transfer protein beta ENCODES a protein that exhibits phosphatidylcholine binding (ortholog); phosphatidylcholine intramembrane carrier activity (ortholog); phosphatidylcholine transfer activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); phospholipid transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955455 2210019 2275206 - 102021092 AGCD01045590;AGCD01045591;GBCE01075253;XM_005396160;XM_005396161;XM_013520442 XP_005396217;XP_005396218;XP_013375896 MODEL 8715687 protein-coding Rap1gds1 Rap1 GTPase-GDP dissociation stimulator 1 ENCODES a protein that exhibits GTPase regulator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); CAAX-box protein maturation (ortholog); cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ALFADHEL SYNDROME (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955405 8555117 8708604 + 102019351 AGCD01004747;AGCD01004748;AGCD01004749;AGCD01004750;GBDF01002792;GBDF01002797;XM_013517446;XM_013517447 XP_013372900;XP_013372901 MODEL 10085203 ncrna LOC106150352 uncharacterized LOC106150352 NW_004955474 391121 400335 - 106150352 AGCD01054217;XR_001237121;XR_001237122 MODEL 9007281 protein-coding Sft2d2 SFT2 domain containing 2 ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955462 8878387 8897523 - 102018369 AGCD01049329;AGCD01049330;AGCD01049331;GBDK01080878;XM_005398208 XP_005398265 MODEL 8913280 pseudo LOC102005572 tRNA pseudouridine(38/39) synthase-like NW_004955409 17846564 17848790 + 102005572 AGCD01009800 MODEL 9048651 protein-coding Plekho2 pleckstrin homology domain containing O2 INVOLVED IN macrophage apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); carotid stenosis (ortholog); colorectal cancer (ortholog) NW_004955450 10692305 10714031 - 102015262 AGCD01042632;GBCE01154962;XM_005393747 XP_005393804 MODEL 8956055 protein-coding Snx4 sorting nexin 4 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); insulin receptor binding (ortholog); leptin receptor binding (ortholog); INVOLVED IN endocytic recycling (ortholog); positive regulation of autophagosome assembly (ortholog); positive regulation of histamine secretion by mast cell (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic dynein complex (ortholog); early endosome (ortholog) NW_004955427 24520125 24579589 - 102022835 AGCD01027512;AGCD01027513;GBDF01152970;XM_005386551 XP_005386608 MODEL 8853081 protein-coding Phf2 PHD finger protein 2 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); histone H3K9 demethylase activity (ortholog); histone H4K20 demethylase activity (ortholog); INVOLVED IN negative regulation of rDNA heterochromatin formation (ortholog); transcription initiation-coupled chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN catalytic complex (ortholog); kinetochore (ortholog); nucleolus (ortholog) NW_004955515 4428068 4471642 - 102023288 AGCD01067320;AGCD01067321;GBCB01056324;XM_005408895 XP_005408952 MODEL 9067501 protein-coding Epo erythropoietin ENCODES a protein that exhibits cytokine activity (ortholog); erythropoietin receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN acute-phase response (ortholog); apoptotic process (ortholog); cell surface receptor signaling pathway via STAT (ortholog); PARTICIPATES IN erythropoietin signaling pathway; hypoxia inducible factor pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Subdural Hematoma (ortholog); Acute-Phase Reaction (ortholog); FOUND IN cell body (ortholog); cell surface (ortholog); extracellular region (ortholog) NW_004955573 203875 206078 - 102013562 AGCD01074966;GBDF01164330;XM_005413690 XP_005413747 MODEL 730469130 snorna SNORD60 Small nucleolar RNA SNORD60 8735085 ncrna LOC102013311 uncharacterized LOC102013311 NW_004955499 2225788 2230856 + 102013311 AGCD01063428;GBDK01220024;XR_001231465 MODEL 8997740 protein-coding Specc1l sperm antigen with calponin homology and coiled-coil domains 1 like ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adherens junction organization (ortholog); anterior neural tube closure (ortholog); ASSOCIATED WITH cleft palate (ortholog); oblique facial clefting 1 (ortholog); prostate cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955455 7739105 7879489 + 102027269 AGCD01045862;AGCD01045863;AGCD01045864;AGCD01045865;AGCD01045866;GBDF01010265;XM_005396373;XM_005396374;XM_005396375;XM_005396376;XM_013520321 XP_005396430;XP_005396431;XP_005396432;XP_005396433;XP_013375775 MODEL 8762799 protein-coding LOC102008562 carboxylesterase 1D-like NW_004955433 13405185 13440775 - 102008562 AGCD01031690;GBDJ01424046;XM_005388329;XM_005388330 XP_005388386;XP_005388387 MODEL 9042750 protein-coding Polk DNA polymerase kappa ENCODES a protein that exhibits DNA polymerase activity (ortholog); DNA-directed DNA polymerase activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA biosynthetic process (ortholog); DNA damage response (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); site of DNA damage (ortholog) NW_004955425 25164749 25228064 - 102025704 AGCD01025910;AGCD01025911;GBDK01191546;XM_005386051;XM_013514789;XM_013514790;XM_013514791;XM_013514792;XM_013514793;XM_013514794 XP_005386108;XP_013370243;XP_013370244;XP_013370245;XP_013370246;XP_013370247;XP_013370248 MODEL 8841891 protein-coding Rrp1b ribosomal RNA processing 1B ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cellular response to virus (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN chromosome (ortholog); euchromatin (ortholog); granular component (ortholog) NW_004955407 38553866 38577547 - 102029706 AGCD01007808;AGCD01007809;GBCB01098102;XM_005375782 XP_005375839 MODEL 8950831 protein-coding LOC102016365 solute carrier organic anion transporter family member 1B3 NW_004955413 16924713 17015963 - 102016365 AGCD01014117;AGCD01014118;AGCD01014119;AGCD01014120;AGCD01014121;AGCD01014122;AGCD01014123;AGCD01014124;GBCQ01101850;XM_005379055;XM_013511266;XM_013511267 XP_005379112;XP_013366720;XP_013366721 MODEL 8889880 protein-coding Rcbtb2 RCC1 and BTB domain containing protein 2 INVOLVED IN cell population proliferation (ortholog); digestive tract development (ortholog); liver development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955431 2122640 2170222 - 102016407 AGCD01029923;GBCB01040884;XM_005387558;XM_005387559;XM_005387562;XM_005387564;XM_005387565;XM_005387567;XM_013515735;XM_013515736;XM_013515737;XM_013515738;XM_013515739;XM_013515740;XM_013515741;XM_013515742 XP_005387615;XP_005387616;XP_005387619;XP_005387621;XP_005387622;XP_005387624;XP_013371189;XP_013371190;XP_013371191;XP_013371192;XP_013371193;XP_013371194;XP_013371195;XP_013371196 MODEL 8990233 protein-coding LOC102019527 IQ domain-containing protein F5-like NW_004955532 3445260 3445766 + 102019527 AGCD01070280;GBDF01010020;XM_005410323 XP_005410380 MODEL 8983663 ncrna LOC102004128 uncharacterized LOC102004128 NW_004955563 205695 206242 - 102004128 AGCD01074053;XR_265014 MODEL 39133490 snrna U4 U4 spliceosomal RNA 8957251 protein-coding LOC102010114 vomeronasal type-1 receptor 4-like NW_004955603 478161 479087 + 102010114 AGCD01076848;XM_005414845 XP_005414902 MODEL 8944149 protein-coding Wdr33 WD repeat domain 33 INVOLVED IN mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN fibrillar center (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog); nucleoplasm (ortholog) NW_004955459 2740465 2841376 + 102022789 AGCD01048001;AGCD01048002;AGCD01048003;GBDF01081918;XM_005397576;XM_005397577;XM_005397580;XM_005397581;XM_005397582;XM_005397587;XM_005397588;XM_005397589;XM_013521041;XM_013521042;XM_013521044;XM_013521045;XM_013521046 XP_005397633;XP_005397634;XP_005397637;XP_005397638;XP_005397639;XP_005397644;XP_005397645;XP_005397646;XP_013376495;XP_013376496;XP_013376498;XP_013376499;XP_013376500 MODEL 8725642 protein-coding Rgs7 regulator of G protein signaling 7 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); G-protein beta-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); negative regulation of G protein-coupled receptor signaling pathway (ortholog); positive regulation of potassium ion transmembrane transport (ortholog); PARTICIPATES IN dopamine signaling pathway via D1 family of receptors; dopamine signaling pathway via D2 family of receptors; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH esophageal cancer (ortholog); Experimental Seizures (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell tip (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955406 10669127 11127564 + 102019356 AGCD01005869;AGCD01005870;AGCD01005871;AGCD01005872;AGCD01005873;AGCD01005874;AGCD01005875;AGCD01005876;AGCD01005877;AGCD01005878;AGCD01005879;AGCD01005880;AGCD01005881;AGCD01005882;GBCE01084812;GBCE01084814;XM_005374822;XM_005374823;XM_005374824;XM_005374825;XM_005374826;XM_013520541;XM_013520556 XP_005374879;XP_005374880;XP_005374881;XP_005374882;XP_005374883;XP_013375995;XP_013376010 MODEL 8896336 pseudo LOC102006265 serine/arginine-rich splicing factor 12 pseudogene NW_004955430 10505467 10561459 + 102006265 AGCD01029436;AGCD01029437;AGCD01029438 MODEL 8796836 pseudo LOC102012095 heterogeneous nuclear ribonucleoprotein M pseudogene NW_004955417 9967960 9969097 + 102012095 AGCD01018063 MODEL 8782076 ncrna LOC102011289 uncharacterized LOC102011289 NW_004955411 10258447 10278073 - 102011289 AGCD01011777;GBDF01225406;XR_001232804 MODEL 9032392 protein-coding LOC102011733 cytochrome b-c1 complex subunit 9 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955455 4013197 4015448 + 102011733 AGCD01045662;GBDF01008630;XM_005396224 XP_005396281 MODEL 8703700 protein-coding Ptpn11 protein tyrosine phosphatase non-receptor type 11 ENCODES a protein that exhibits cadherin binding (ortholog); cell adhesion molecule binding (ortholog); D1 dopamine receptor binding (ortholog); INVOLVED IN atrioventricular canal development (ortholog); axonogenesis (ortholog); Bergmann glial cell differentiation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955482 8934734 9031230 + 102009502 AGCD01057558;AGCD01057559;AGCD01057560;GBDF01081705;XM_005403196;XM_005403197;XM_005403198;XM_013503715;XM_013503717 XP_005403253;XP_005403254;XP_005403255;XP_013359169;XP_013359171 MODEL 8940012 protein-coding LOC102003103 uncharacterized LOC102003103 NW_004955412 1132411 1136987 + 102003103 AGCD01012507;GBDF01116497;XM_005377954 XP_005378011 MODEL 10369625 ncrna LOC106147460 uncharacterized LOC106147460 NW_004955563 1609581 1610621 + 106147460 AGCD01074153;XR_001232372 MODEL 8762000 ncrna LOC102004885 uncharacterized LOC102004885 NW_004955405 196814 198433 + 102004885 AGCD01004554;GBDF01017517;XR_259350 MODEL 730469345 snorna SNORA40 Small nucleolar RNA SNORA40 39134221 ribozyme RNaseP_nuc Nuclear RNase P 9019716 protein-coding Slc35f2 solute carrier family 35 member F2 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); tRNA queuosine(34) biosynthetic process from salvaged queuine (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi membrane (ortholog); plasma membrane (ortholog) NW_004955412 10111134 10156575 - 102003744 AGCD01012757;AGCD01012758;GBCQ01037767;XM_013511242 XP_013366696 MODEL 9051545 protein-coding LOC102022408 zinc finger protein 709-like NW_004955499 281448 281870 + 102022408 AGCD01063210;XM_013505552 XP_013361006 MODEL 8791634 protein-coding Trank1 tetratricopeptide repeat and ankyrin repeat containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog) NW_004955421 3707510 3852886 - 102029868 AGCD01021665;AGCD01021666;AGCD01021667;AGCD01021668;AGCD01021669;AGCD01021670;AGCD01021671;GBDK01237538;XM_005383682;XM_013513764;XM_013513765;XM_013513766 XP_005383739;XP_013369218;XP_013369219;XP_013369220 MODEL 8901407 protein-coding Prkce protein kinase C epsilon ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); actin monomer binding (ortholog); calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to ethanol (ortholog); cellular response to hypoxia (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955441 12642703 13142396 + 102010309 AGCD01037132;AGCD01037133;AGCD01037134;AGCD01037135;AGCD01037136;AGCD01037137;AGCD01037138;AGCD01037139;AGCD01037140;AGCD01037141;AGCD01037142;GBDI01034881;XM_005390971;XM_013517553;XM_013517554 XP_005391028;XP_013373007;XP_013373008 MODEL 39133594 snrna U2 U2 spliceosomal RNA 8799882 protein-coding LOC102010896 protocadherin beta-4-like NW_004955415 12626696 12673195 - 102010896 AGCD01016208;AGCD01016209;AGCD01016210;AGCD01016211;AGCD01016212;AGCD01016213;AGCD01016214;AGCD01016215;AGCD01016216;AGCD01016217;AGCD01016218;GBDJ01233417;XM_013512127 XP_013367581 MODEL 730469208 snorna SNORD103 Small nucleolar RNA SNORD103/SNORD85 8789681 pseudo LOC102004129 protein kinase C iota type pseudogene NW_004955446 7596366 7600065 + 102004129 AGCD01040126;XM_005392657 MODEL 39131303 protein-coding C1orf56 chromosome 1 open reading frame 56 8936849 pseudo LOC102005573 peroxiredoxin-1 pseudogene NW_004955410 34010516 34011152 - 102005573 AGCD01011394 MODEL 10386964 ncrna LOC106150353 uncharacterized LOC106150353 NW_004955474 6849183 6898851 - 106150353 AGCD01054497;AGCD01054498;AGCD01054499;AGCD01054500;AGCD01054501;AGCD01054502;AGCD01054503;GBDF01076972;XR_001237123 MODEL 730469014 snorna SNORA61 Small nucleolar RNA SNORA61 8991542 protein-coding Pitpnc1 phosphatidylinositol transfer protein cytoplasmic 1 ENCODES a protein that exhibits phosphatidic acid binding (ortholog); phosphatidic acid transfer activity (ortholog); phosphatidylcholine intramembrane carrier activity (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); phospholipid transport (ortholog); signal transduction (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); thymoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955478 6607686 6847716 + 102010900 AGCD01055908;AGCD01055909;AGCD01055910;AGCD01055911;AGCD01055912;AGCD01055913;AGCD01055914;AGCD01055915;AGCD01055916;AGCD01055917;GBCE01153754;XM_005402155;XM_013503184 XP_005402212;XP_013358638 MODEL 8829580 trna Trnah-gug transfer RNA histidine(anticodon GUG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955568;NW_004955409;NW_004955434;NW_004955409;NW_004955409 58646;8201309;17523204;8203034;8201874 58717;8201380;17523275;8203105;8201945 -;-;-;+;+ 101978821 AGCD01009385;AGCD01032537;AGCD01074502 MODEL 8913957 pseudo LOC102005933 LYR motif-containing protein 2 pseudogene NW_004955418 22822234 22822422 + 102005933 AGCD01019292 MODEL 8958460 protein-coding Srp19 signal recognition particle 19 ENCODES a protein that exhibits 7S RNA binding (ortholog); ribosome binding (ortholog); RNA binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955418 2551533 2558252 - 102010161 AGCD01018773;GBDF01196819;XM_005382144;XM_013512933;XM_013512935 XP_005382201;XP_013368387;XP_013368389 MODEL 8920903 pseudo LOC102013317 eukaryotic initiation factor 4A-I-like NW_004955428 6591052 6624236 - 102013317 AGCD01027743;AGCD01027744 MODEL 8703293 protein-coding Rgs7bp regulator of G protein signaling 7 binding protein INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of postsynaptic membrane potential (ortholog); PARTICIPATES IN dopamine signaling pathway via D1 family of receptors; dopamine signaling pathway via D2 family of receptors; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendritic shaft (ortholog) NW_004955446 4354689 4451269 - 102022648 AGCD01040034;AGCD01040035;AGCD01040036;AGCD01040037;GBDJ01301600;XM_005392636 XP_005392693 MODEL 8725146 protein-coding Spef1 sperm flagellar and cilia associated 1 ENCODES a protein that exhibits actin binding (ortholog); microtubule binding (ortholog); INVOLVED IN axonemal central apparatus assembly (ortholog); cilium movement (ortholog); filopodium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN 9+2 motile cilium (ortholog); apical plasma membrane (ortholog); axonemal central apparatus (ortholog) NW_004955415 14620593 14626049 - 102030067 AGCD01016301;GBDI01001315;XM_005380802;XM_013512284 XP_005380859;XP_013367738 MODEL 8815960 ncrna LOC102018314 uncharacterized LOC102018314 NW_004955515 3174164 3177414 - 102018314 AGCD01067274;GBCQ01086323;XR_264521 MODEL 8949683 protein-coding Poll DNA polymerase lambda ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); DNA polymerase activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN base-excision repair, gap-filling (ortholog); DNA biosynthetic process (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955485 8691886 8700681 + 102025467 AGCD01058724;GBDJ01225502;XM_005403869;XM_005403870;XM_013504091 XP_005403926;XP_005403927;XP_013359545 MODEL 8734061 protein-coding Ppp1r12c protein phosphatase 1 regulatory subunit 12C ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955567 1058676 1072555 + 102005426 AGCD01074457;AGCD01074458;GBCE01055419;GBDJ01084720;XM_013509250;XM_013509251;XM_013509252;XM_013509253;XM_013509254 XP_013364704;XP_013364705;XP_013364706;XP_013364707;XP_013364708 MODEL 9035499 protein-coding LOC102019867 olfactory receptor 14I1-like NW_004955581 883822 884757 - 102019867 AGCD01075701;XM_013509731 XP_013365185 MODEL 8912778 pseudo LOC102010116 oxysterol-binding protein-related protein 8-like NW_004955648 80516 86972 - 102010116 AGCD01077770 MODEL 39133491 snrna U4 U4 spliceosomal RNA 8832226 protein-coding Tinagl1 tubulointerstitial nephritis antigen like 1 ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); laminin binding (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955452 9995658 10007418 + 102010121 AGCD01044267;GBCE01096097;XM_005395027;XM_005395028 XP_005395084;XP_005395085 MODEL 9000326 protein-coding Rap2a RAP2A, member of RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); establishment of protein localization (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); endolysosome (ortholog); Golgi apparatus (ortholog) NW_004955404 12897518 12936964 - 102018678 AGCD01003477;GBDI01138502;GBDK01273710;XM_005374084 XP_005374141 MODEL 8758934 protein-coding Prune2 prune homolog 2 with BCH domain ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); presynapse (ortholog) NW_004955512 2469773 2727067 + 102010829 AGCD01066680;AGCD01066681;AGCD01066682;AGCD01066683;AGCD01066684;GBDJ01112903;XM_013506527 XP_013361981 MODEL 8941599 protein-coding Snx5 sorting nexin 5 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); dynactin binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN endosome membrane tubulation (ortholog); epidermal growth factor catabolic process (ortholog); negative regulation of blood pressure (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN brush border (ortholog); cytoplasmic side of early endosome membrane (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955415 26786836 26805762 - 102012316 AGCD01016607;AGCD01016608;GBCB01019926;GBDK01008760;XM_005380914 XP_005380971 MODEL 8929377 protein-coding Wdr35 WD repeat domain 35 ENCODES a protein that exhibits protein carrier activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955469 2484972 2546562 - 102011643 AGCD01052277;GBBH01005246;XM_005400340 XP_005400397 MODEL 8809551 protein-coding Rrp36 ribosomal RNA processing 36 INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955437 8995983 9001517 + 102027568 AGCD01034512;GBCB01041010;XM_005389737;XM_013516897 XP_005389794;XP_013372351 MODEL 8708204 protein-coding Rpgr retinitis pigmentosa GTPase regulator ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to light stimulus (ortholog); cilium assembly (ortholog); eye photoreceptor cell development (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell projection (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955601 398772 453271 - 102028252 AGCD01076755;AGCD01076756;AGCD01076757;GBDJ01114355;XM_005414820;XM_005414821;XM_013510073;XM_013510074 XP_005414877;XP_005414878;XP_013365527;XP_013365528 MODEL 8811037 pseudo LOC102004887 alpha-endosulfine pseudogene NW_004955405 31961051 31962768 - 102004887 AGCD01005322 MODEL 8871374 ncrna LOC102016366 uncharacterized LOC102016366 NW_004955468 1099889 1103210 + 102016366 AGCD01051756;GBDF01038914;XR_263373 MODEL 8702276 pseudo LOC102008196 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 pseudogene NW_004955410 6003925 6016151 - 102008196 AGCD01010695 MODEL 9050315 protein-coding LOC102007420 cytochrome P450 2D16-like NW_004955413 27581708 27585916 - 102007420 AGCD01014517;GBCQ01010821;XM_005379405 XP_005379462 MODEL 8969263 protein-coding Spef2 sperm flagellar and cilia associated 2 INVOLVED IN brain morphogenesis (ortholog); cerebrospinal fluid circulation (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955426 20587312 20747034 + 102008012 AGCD01026571;AGCD01026572;AGCD01026573;AGCD01026574;GBDF01125859;XM_005386196;XM_005386198;XM_005386199;XM_013515000;XM_013515001;XR_261209 XP_005386253;XP_005386255;XP_005386256;XP_013370454;XP_013370455 MODEL 8839057 protein-coding Rcc1 regulator of chromosome condensation 1 ENCODES a protein that exhibits chromatin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); histone binding (ortholog); INVOLVED IN chromosome segregation (ortholog); G1/S transition of mitotic cell cycle (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH axonal neuropathy (ortholog); brain disease (ortholog); Familial Prostate Cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); condensed nuclear chromosome (ortholog) NW_004955452 7612784 7643275 + 102017089 AGCD01044178;AGCD01044179;GBDF01004865;XM_005394955;XM_005394956;XM_013519490 XP_005395012;XP_005395013;XP_013374944 MODEL 730469309 snorna SNORA17 Small nucleolar RNA SNORA17 39133595 snrna U2 U2 spliceosomal RNA 8857853 protein-coding Prkcg protein kinase C gamma ENCODES a protein that exhibits calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); protein kinase activity (ortholog); protein serine/threonine/tyrosine kinase activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); chemosensory behavior (ortholog); innervation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Ataxia (ortholog); autosomal recessive spinocerebellar ataxia 14 (ortholog); FOUND IN calyx of Held (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955604 262182 279259 - 102018143 AGCD01076875;GBBH01155679;XM_005414871 XP_005414928 MODEL 153211029 protein-coding PLEKHO2 pleckstrin homology domain containing O2 8711176 pseudo LOC102012100 target of rapamycin complex 2 subunit MAPKAP1-like NW_004955421 30163102 30165459 + 102012100 AGCD01022382 MODEL 9001999 protein-coding Epor erythropoietin receptor ENCODES a protein that exhibits erythropoietin receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); cellular response to kainic acid (ortholog); decidualization (ortholog); PARTICIPATES IN erythropoietin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anemia (ortholog); Brain Hypoxia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955495 2293587 2299302 - 102022714 AGCD01061763;GBCQ01062324;XM_005405664 XP_005405721 MODEL 9049169 protein-coding Selenoi selenoprotein I ENCODES a protein that exhibits ethanolaminephosphotransferase activity (ortholog); INVOLVED IN ether lipid biosynthetic process (ortholog); myelination (ortholog); phosphatidylethanolamine biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955469 8369499 8410628 + 102011299 AGCD01052465;AGCD01052466;GBDF01041114;XM_005400425 XP_005400482 MODEL 9050973 pseudo LOC102005574 ATP-binding cassette sub-family F member 2-like NW_004955463 4656863 4661099 + 102005574 AGCD01049614 MODEL 9017677 protein-coding C1qa complement C1q A chain ENCODES a protein that exhibits IgG binding (ortholog); IgM binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN astrocyte activation (ortholog); complement activation, classical pathway (ortholog); complement-mediated synapse pruning (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Brain Injuries (ortholog); C1q Deficiency (ortholog); FOUND IN cell surface (ortholog); complement component C1 complex (ortholog); complement component C1q complex (ortholog) NW_004955452 2753362 2756220 + 102012920 AGCD01043903;GBDK01006456;XM_013519754 XP_013375208 MODEL 730469494 snorna SNORA61 Small nucleolar RNA SNORA61 9036604 trna Trnai-aau transfer RNA isoleucine (anticodon AAU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978794 AGCD01050493;AGCD01050590;AGCD01050591;AGCD01050597;AGCD01051466;AGCD01051471;AGCD01057606;AGCD01077147 MODEL 8977581 ncrna LOC102008945 uncharacterized LOC102008945 NW_004955418 195005 213629 + 102008945 AGCD01018668;AGCD01018669;GBDF01000281;XR_001233498;XR_001233499 MODEL 8703787 ncrna LOC102011736 uncharacterized LOC102011736 NW_004955456 6662166 6678865 - 102011736 AGCD01046375;GBDF01041115;XR_001236334 MODEL 10388568 ncrna LOC106147461 uncharacterized LOC106147461 NW_004955563 1273169 1279640 - 106147461 AGCD01074138;GBCQ01152505;XR_001232373;XR_001232374;XR_001232375;XR_001232376;XR_001232377 MODEL 8985272 protein-coding LOC102003104 uncharacterized LOC102003104 NW_004955412 13999049 14010479 - 102003104 AGCD01012849;AGCD01012850;GBCB01025463;XM_013510960;XM_013510961;XM_013510962;XM_013510963;XM_013510964;XM_013510965;XM_013510966;XR_001232853;XR_001232854 XP_013366414;XP_013366415;XP_013366416;XP_013366417;XP_013366418;XP_013366419;XP_013366420 MODEL 8935405 protein-coding LOC102019530 olfactory receptor 2A12-like NW_004955537 2642133 2772590 - 102019530 AGCD01070933;AGCD01070934;AGCD01070935;AGCD01070936;AGCD01070937;AGCD01070938;GBDF01080801;GBDF01080802;XM_005410629 XP_005410686 MODEL 730469368 snorna SNORA40 Small nucleolar RNA SNORA40 39134220 ribozyme RNaseP_nuc Nuclear RNase P 8737858 protein-coding Slc35f3 solute carrier family 35 member F3 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); thiamine transport (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955492 5349445 5661186 - 102028980 AGCD01060744;AGCD01060745;AGCD01060746;AGCD01060747;AGCD01060748;AGCD01060749;AGCD01060750;GBBH01193275;XM_005404959;XM_005404960 XP_005405016;XP_005405017 MODEL 9019832 pseudo LOC102008200 septin-2 pseudogene NW_004955463 231431 232195 - 102008200 AGCD01049478 MODEL 8847908 ncrna LOC102006268 uncharacterized LOC102006268 NW_004955432 9553990 9572917 + 102006268 AGCD01030908;AGCD01030909;GBDF01017350;XR_261521 MODEL 730468965 snorna SNORD103 Small nucleolar RNA SNORD103/SNORD85 8891422 ncrna LOC102011290 uncharacterized LOC102011290 NW_004955464 5744512 5747225 + 102011290 AGCD01050012;AGCD01050013;GBDF01041677;XR_263200 MODEL 39132023 snorna SNORD61 Small nucleolar RNA SNORD61 8967210 protein-coding Phf20 PHD finger protein 20 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN histone acetyltransferase complex (ortholog); MLL1 complex (ortholog); NSL complex (ortholog) NW_004955422 25563511 25688546 - 102004175 AGCD01023253;AGCD01023254;AGCD01023255;AGCD01023256;AGCD01023257;AGCD01023258;AGCD01023259;AGCD01023260;GBDK01185246;XM_005384764;XM_005384766;XM_005384767;XM_013514071;XM_013514072;XM_013514073 XP_005384821;XP_005384823;XP_005384824;XP_013369525;XP_013369526;XP_013369527 MODEL 9020553 ncrna LOC102004130 uncharacterized LOC102004130 NW_004955447 15374198 15375706 - 102004130 AGCD01041052;GBDF01111391;XR_262435 MODEL 9047727 protein-coding Tiparp TCDD inducible poly(ADP-ribose) polymerase ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); estrogen metabolic process (ortholog); face morphogenesis (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955448 7687668 7716481 + 102019653 AGCD01041422;GBDF01125248;XM_005393080 XP_005393137 MODEL 8946942 pseudo LOC102008563 60S ribosomal protein L39-like NW_004955520 1054945 1055417 - 102008563 AGCD01068042 MODEL 8881027 protein-coding LOC102010898 creatine kinase U-type, mitochondrial NW_004955416 10117075 10122968 + 102010898 AGCD01017108;AGCD01017109;GBDJ01024945;XM_013512557;XM_013512558 XP_013368011;XP_013368012 MODEL 8958005 pseudo LOC102013318 nucleolin-like NW_004955510 6049576 6050426 + 102013318 AGCD01066299 MODEL 8872280 pseudo LOC102018315 L-lactate dehydrogenase A chain pseudogene NW_004955432 2293262 2295667 - 102018315 AGCD01030614 MODEL 8967547 protein-coding Wdr36 WD repeat domain 36 INVOLVED IN ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic asthma (ortholog); allergic rhinitis (ortholog); FOUND IN small-subunit processome (ortholog) NW_004955418 3988073 4023425 - 102017017 AGCD01018806;AGCD01018807;GBDK01006850;XM_005382167;XM_013513044 XP_005382224;XP_013368498 MODEL 8996427 protein-coding Ptpn12 protein tyrosine phosphatase non-receptor type 12 ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); regulation of epidermal growth factor receptor signaling pathway (ortholog); tissue regeneration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); podosome (ortholog) NW_004955410 7556283 7599170 - 102011513 AGCD01010719;AGCD01010720;GBBH01228182;XM_005377213 XP_005377270 MODEL 8731927 protein-coding Sft2d3 SFT2 domain containing 3 NW_004955459 2842452 2845045 - 102026837 AGCD01048003;GBDI01227745;XM_005397594 XP_005397651 MODEL 39133492 snrna U4 U4 spliceosomal RNA 730469310 snorna SNORA17 Small nucleolar RNA SNORA17 9054371 protein-coding Ppp1r13b protein phosphatase 1 regulatory subunit 13B INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of cellular process (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Childhood Schizophrenia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955538 2519765 2594769 - 102017603 AGCD01071128;AGCD01071129;GBDI01140082;XM_005410809;XM_005410811;XM_013507841;XM_013507842 XP_005410866;XP_005410868;XP_013363295;XP_013363296 MODEL 9017772 pseudo LOC102019868 ubiquitin-conjugating enzyme E2 variant 2-like NW_004955402 7846965 7847581 - 102019868 AGCD01000186 MODEL 39133598 snrna U2 U2 spliceosomal RNA 8853456 protein-coding Rap2b RAP2B, member of RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN establishment of endothelial intestinal barrier (ortholog); negative regulation of cell migration (ortholog); platelet activation (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell contact zone (ortholog); cytosol (ortholog) NW_004955448 4668477 4671629 + 102011822 AGCD01041350;AGCD01041351;GBCE01118185;GBDJ01276338;XM_005393055 XP_005393112 MODEL 8762871 pseudo LOC102012105 39S ribosomal protein L33, mitochondrial pseudogene NW_004955425 1338173 1339060 + 102012105 AGCD01025221;XM_005386083 MODEL 8804250 protein-coding Pitpnm1 phosphatidylinositol transfer protein membrane associated 1 ENCODES a protein that exhibits calcium ion binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolic process (ortholog); phospholipid transport (ortholog); positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell body (ortholog); cleavage furrow (ortholog); cytosol (ortholog) NW_004955422 17985698 17997204 + 102015532 AGCD01022934;GBDF01046509;GBDI01075310;XM_005384318;XM_005384319;XM_005384320 XP_005384375;XP_005384376;XP_005384377 MODEL 730469311 snorna SNORA17 Small nucleolar RNA SNORA17 153211020 protein-coding PRUNE2 prune homolog 2 with BCH domain 8839605 protein-coding Srp54 signal recognition particle 54 ENCODES a protein that exhibits 7S RNA binding (ortholog); endoplasmic reticulum signal sequence receptor activity (ortholog); GDP binding (ortholog); INVOLVED IN granulocyte differentiation (ortholog); protein targeting to ER (ortholog); SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); nuclear speck (ortholog) NW_004955409 25977226 26016351 - 102004905 AGCD01010144;AGCD01010145;AGCD01010146;AGCD01010147;AGCD01010148;GBDK01188091;XM_005376933;XM_005376934 XP_005376990;XP_005376991 MODEL 8710536 protein-coding Rrp7a ribosomal RNA processing 7 homolog A INVOLVED IN blastocyst formation (ortholog); cilium disassembly (ortholog); protein localization to nucleolus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955413 27936427 27941311 - 102011428 AGCD01014538;GBCE01004837;XM_005379418 XP_005379475 MODEL 8890241 protein-coding Rgs8 regulator of G protein signaling 8 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled acetylcholine receptor signaling pathway (ortholog); regulation of dopamine receptor signaling pathway (ortholog); response to amphetamine (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); lung cancer (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); dendrite (ortholog); membrane (ortholog) NW_004955406 21482810 21523518 - 102018888 AGCD01006128;AGCD01006129;AGCD01006130;GBDF01058403;XM_005375009;XM_005375010;XM_005375011;XM_013521471;XM_013521476 XP_005375066;XP_005375067;XP_005375068;XP_013376925;XP_013376930 MODEL 8707092 trna Trnai-gau transfer RNA isoleucine (anticodon GAU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955500 8293826 8293897 + 101978795 AGCD01063986 MODEL 8965578 protein-coding LOC102022409 uncharacterized LOC102022409 NW_004955500 6832058 6838822 - 102022409 AGCD01063892;GBCQ01062310;XM_005406626;XM_013505701;XR_001231495;XR_001231496;XR_001231497;XR_001231498;XR_264239;XR_264241 XP_005406683;XP_013361155 MODEL 9052661 pseudo LOC102008949 tubulin alpha-1A chain-like NW_004955420 26771001 26771926 - 102008949 AGCD01021431 MODEL 8791335 protein-coding Trap1 TNF receptor associated protein 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of cellular respiration (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide (ortholog); translational attenuation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial matrix (ortholog) NW_004955442 13697471 13733161 + 102019206 AGCD01037786;GBDF01051870;XM_005391321;XM_005391323;XM_013517803 XP_005391378;XP_005391380;XP_013373257 MODEL 730469537 snorna SNORA40 Small nucleolar RNA SNORA40 9037542 protein-coding LOC102010123 uncharacterized LOC102010123 NW_004955406 1259242 1295310 - 102010123 AGCD01005629;AGCD01005630;GBCQ01057585;XM_013503029 XP_013358483 MODEL 8789423 ncrna LOC102019531 uncharacterized LOC102019531 NW_004955437 13535860 13540498 + 102019531 AGCD01034661;GBCE01038393;XR_001235077 MODEL 8747700 protein-coding LOC102016368 vomeronasal type-2 receptor 26-like NW_004955413 5213370 5228381 - 102016368 AGCD01013656;AGCD01013657;AGCD01013658;XM_013511289 XP_013366743 MODEL 9050685 protein-coding Wdr37 WD repeat domain 37 INVOLVED IN corpus callosum development (ortholog); lymphocyte homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebellar hypoplasia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955421 30097046 30161762 - 102023043 AGCD01022380;AGCD01022381;AGCD01022382;GBDF01221568;XM_005383910;XM_013513754;XM_013513755;XM_013513756;XM_013513758;XM_013513759 XP_005383967;XP_013369208;XP_013369209;XP_013369210;XP_013369212;XP_013369213 MODEL 9067189 protein-coding Polm DNA polymerase mu ENCODES a protein that exhibits DNA-directed DNA polymerase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN B cell differentiation (ortholog); somatic hypermutation of immunoglobulin genes (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955456 7886182 7893800 + 102022672 AGCD01046435;GBDI01125354;XM_005396675;XM_005396676;XM_005396677;XM_005396678;XM_005396679 XP_005396732;XP_005396733;XP_005396734;XP_005396735;XP_005396736 MODEL 8756103 pseudo LOC102006269 cytochrome b-c1 complex subunit Rieske, mitochondrial-like NW_004955432 23785334 23799271 + 102006269 AGCD01031294;AGCD01031295 MODEL 8865523 protein-coding LOC102005934 olfactory receptor 1L3-like NW_004955419 5269472 5270444 - 102005934 AGCD01019797;XM_013513102 XP_013368556 MODEL 8980830 protein-coding Plekhs1 pleckstrin homology domain containing S1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955431 18745990 18798517 + 102008969 AGCD01030434;AGCD01030435;GBDI01020069;XM_005387803;XM_013515824;XM_013515825;XM_013515826;XM_013515828;XM_013515829;XM_013515830;XM_013515831;XR_001234618;XR_001234619;XR_001234620;XR_001234621 XP_005387860;XP_013371278;XP_013371279;XP_013371280;XP_013371282;XP_013371283;XP_013371284;XP_013371285 MODEL 9026066 protein-coding LOC102004135 beta-defensin 105-like NW_004955403 53573434 53576556 - 102004135 AGCD01003064;GBCE01155754;XM_005373832 XP_005373889 MODEL 8833098 protein-coding Phf20l1 PHD finger protein 20 like 1 ENCODES a protein that exhibits methylation-dependent protein binding (ortholog); INVOLVED IN negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955461 7391175 7465012 + 102013260 AGCD01048918;AGCD01048919;GBCE01104746;XM_013521336;XM_013521337;XM_013521338 XP_013376790;XP_013376791;XP_013376792 MODEL 8849622 protein-coding Selenok selenoprotein K ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN calcium ion transport (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); macrophage derived foam cell differentiation (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955430 3870925 3876636 - 102005283 AGCD01029230;GBDK01011326;XM_013515674 XP_013371128 MODEL 8753374 protein-coding Snx6 sorting nexin 6 ENCODES a protein that exhibits dynactin binding (ortholog); protein homodimerization activity (ortholog); type I transforming growth factor beta receptor binding (ortholog); INVOLVED IN cellular response to amyloid-beta (ortholog); cellular response to epidermal growth factor stimulus (ortholog); intracellular protein transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); early endosome (ortholog) NW_004955409 26323940 26353675 + 102006748 AGCD01010173;AGCD01010174;AGCD01010175;AGCD01010176;GBCQ01034883;GBDK01020668;XM_005376940 XP_005376997 MODEL 8845450 protein-coding Tipin TIMELESS interacting protein INVOLVED IN cell cycle phase transition (ortholog); DNA damage checkpoint signaling (ortholog); DNA replication checkpoint signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955450 9259838 9279479 + 102029924 AGCD01042589;GBDF01222347;XM_005415299;XM_013518980 XP_005415356;XP_013374434 MODEL 8844852 pseudo LOC102011738 TBC1 domain family member 31-like NW_004955407 28180371 28202117 - 102011738 AGCD01007576;AGCD01007577 MODEL 8720386 pseudo LOC102007426 GMP synthase [glutamine-hydrolyzing] pseudogene NW_004955476 3481522 3489789 + 102007426 AGCD01055252 MODEL 8799639 protein-coding LOC102003108 H/ACA ribonucleoprotein complex subunit 1-like NW_004955413 7012350 7019221 - 102003108 AGCD01013789;GBDI01034364;XM_005378922;XM_005378923 XP_005378979;XP_005378980 MODEL 8905192 pseudo LOC102018316 60S ribosomal protein L9 pseudogene NW_004955518 3771000 3771572 - 102018316 AGCD01067809 MODEL 9058595 protein-coding C1qb complement C1q B chain ENCODES a protein that exhibits identical protein binding (ortholog); IgG binding (ortholog); IgM binding (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); inner ear development (ortholog); response to glucocorticoid (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); C1q Deficiency (ortholog); C1q Deficiency 1 (ortholog); FOUND IN cell surface (ortholog); complement component C1 complex (ortholog); complement component C1q complex (ortholog) NW_004955452 2765844 2771695 + 102010120 AGCD01043903;GBCE01000145;XM_005394745;XM_013519694 XP_005394802;XP_013375148 MODEL 39133406 snorna SNORD105 Small nucleolar RNA SNORD105 8791037 ncrna LOC102008203 uncharacterized LOC102008203 NW_004955465 240199 264436 + 102008203 AGCD01050306;GBDF01083705;XR_001236725;XR_001236726;XR_001236727;XR_001236728;XR_001236729;XR_001236730;XR_263227 MODEL 9057001 protein-coding LOC102011291 cytochrome P450 4A11-like NW_004955464 11487951 11500616 - 102011291 AGCD01050155;GBBH01214209;XM_005398645;XM_005398647 XP_005398702;XP_005398704 MODEL 8791147 protein-coding Prkch protein kinase C eta ENCODES a protein that exhibits diacylglycerol-dependent, calcium-independent serine/threonine kinase activity (ortholog); enzyme binding (ortholog); protein kinase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); negative regulation of glial cell apoptotic process (ortholog); negative regulation of translation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955466 8178323 8393446 - 102013069 AGCD01050981;AGCD01050982;AGCD01050983;AGCD01050984;AGCD01050985;AGCD01050986;AGCD01050987;GBBH01024897;GBDF01082374;XM_005399165 XP_005399222 MODEL 39132792 snorna SNORD62 Small nucleolar RNA SNORD62 8752508 protein-coding Eppk1 epiplakin 1 ENCODES a protein that exhibits intermediate filament binding (ortholog); keratin filament binding (ortholog); INVOLVED IN cytoskeleton organization (ortholog); intermediate filament bundle assembly (ortholog); intermediate filament organization (ortholog); ASSOCIATED WITH Chloracne (ortholog); myoepithelioma (ortholog); FOUND IN anchoring junction (ortholog); apicolateral plasma membrane (ortholog); basal part of cell (ortholog) NW_004955454 2512151 2526080 - 102015600 AGCD01045022;GBCE01166943;XM_005395819 XP_005395876 MODEL 10271148 protein-coding LOC106150354 uncharacterized LOC106150354 NW_004955474 1588034 1590913 - 106150354 AGCD01054259;GBCB01018529;XM_013523093 XP_013378547 MODEL 8976831 ncrna LOC102008564 uncharacterized LOC102008564 NW_004955523 46481 51442 + 102008564 AGCD01068431;GBBH01049104;XR_001231942;XR_264632 MODEL 39132093 snorna SNORA61 Small nucleolar RNA SNORA61 8811877 protein-coding LOC102005576 histone H2B NW_004955465 13104644 13110046 - 102005576 AGCD01050585;GBDF01248769;XM_005398947 XP_005399004 MODEL 730469342 snorna SNORA17 Small nucleolar RNA SNORA17 8952179 pseudo LOC102010899 dnaJ homolog subfamily B member 6-like NW_004955477 2188830 2190566 + 102010899 AGCD01055518;XR_263678 MODEL 8979047 protein-coding Plet1 placenta expressed transcript 1 INVOLVED IN negative regulation of cell-matrix adhesion (ortholog); positive regulation of cell migration (ortholog); wound healing, spreading of epidermal cells (ortholog); FOUND IN apical plasma membrane (ortholog); external side of plasma membrane (ortholog) NW_004955412 13902940 13912761 - 102030508 AGCD01012847;GBDJ01016895;XM_005378121 XP_005378178 MODEL 8901565 protein-coding Rnaset2 ribonuclease T2 ENCODES a protein that exhibits ribonuclease T2 activity (ortholog); INVOLVED IN innate immune response (ortholog); RNA catabolic process (ortholog); ASSOCIATED WITH brain disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); extracellular region (ortholog); lysosomal lumen (ortholog) NW_004955439 15098210 15122015 + 102024851 AGCD01036000;GBBH01032042;XM_005390648;XM_013517408 XP_005390705;XP_013372862 MODEL 10350548 protein-coding LOC106147462 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2-like NW_004955564 2079465 2093223 - 106147462 AGCD01074257;AGCD01074258;AGCD01074259;GBDF01251090;XM_013509196 XP_013364650 MODEL 8959521 protein-coding Sfta2 surfactant associated 2 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955583 865226 866360 - 102022442 AGCD01075871;GBDK01021573;XM_005414328 XP_005414385 MODEL 8903301 protein-coding Rgs9 regulator of G protein signaling 9 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cone photoresponse recovery (ortholog); dark adaptation (ortholog); G protein-coupled dopamine receptor signaling pathway (ortholog); PARTICIPATES IN dopamine signaling pathway via D1 family of receptors; dopamine signaling pathway via D2 family of receptors; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH bradyopsia (ortholog); bradyopsia 1 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN glutamatergic synapse (ortholog); photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog) NW_004955478 4614730 4683152 + 102004811 AGCD01055853;AGCD01055854;AGCD01055855;GBDF01291760;XM_005402137 XP_005402194 MODEL 8910354 ncrna LOC102008951 uncharacterized LOC102008951 NW_004955420 29155972 29159064 - 102008951 AGCD01021493;GBCB01016080;XR_260771 MODEL 9016401 protein-coding Rrp8 ribosomal RNA processing 8 INVOLVED IN cellular response to glucose starvation (ortholog); energy homeostasis (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN chromatin silencing complex (ortholog); cytosol (ortholog); eNoSc complex (ortholog) NW_004955414 22311038 22316144 - 102028180 AGCD01015452;GBCE01188088;XM_005380167 XP_005380224 MODEL 8791415 protein-coding LOC102022412 prostaglandin-E(2) 9-reductase-like NW_004955429 524674 542300 - 102022412 AGCD01028365;GBCQ01005033;XM_005386853;XM_013515393 XP_005386910;XP_013370847 MODEL 39133493 snrna U4 U4 spliceosomal RNA 8785207 ncrna LOC102019871 uncharacterized LOC102019871 NW_004955402 27380168 27384518 - 102019871 AGCD01000700;GBDF01146724;XR_259070 MODEL 9018296 protein-coding Ppp1r13l protein phosphatase 1 regulatory subunit 13 like ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); cardiac right ventricle morphogenesis (ortholog); embryonic camera-type eye development (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH ARRHYTHMOGENIC CARDIOMYOPATHY WITH VARIABLE ECTODERMAL ABNORMALITIES (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); autosomal recessive disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955555 2373088 2390973 - 102022549 AGCD01073148;AGCD01073149;GBCE01005109;GBCQ01038365;XM_013508705;XM_013508706;XM_013508707 XP_013364159;XP_013364160;XP_013364161 MODEL 8825405 protein-coding Speg striated muscle enriched protein kinase INVOLVED IN cardiac muscle cell development (ortholog); circulatory system development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH autosomal recessive centronuclear myopathy (ortholog); Breast Cancer, Familial (ortholog); centronuclear myopathy 5 (ortholog) NW_004955453 13979080 14033718 - 102006206 AGCD01044855;AGCD01044856;AGCD01044857;GBCB01004610;XM_013519790;XM_013519791 XP_013375244;XP_013375245 MODEL 8853554 protein-coding Rpgrip1 RPGR interacting protein 1 INVOLVED IN detection of light stimulus involved in visual perception (ortholog); eye photoreceptor cell development (ortholog); neural precursor cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axoneme (ortholog); ciliary rootlet (ortholog); ciliary tip (ortholog) NW_004955550 2015319 2073627 + 102013011 AGCD01072603;AGCD01072604;AGCD01072605;AGCD01072606;AGCD01072607;AGCD01072608;AGCD01072609;AGCD01072610;AGCD01072611;GBCE01152006;GBCE01156267;XM_013508581 XP_013364035 MODEL 39133600 snrna U2 U2 spliceosomal RNA 9031080 protein-coding Wdr4 WDR4 tRNA N7-guanosine methyltransferase non-catalytic subunit ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN tRNA (guanine-N7)-methylation (ortholog); tRNA modification (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 39044328 39066277 + 102008697 AGCD01007821;GBCB01087848;XM_005375807;XM_005375808 XP_005375864;XP_005375865 MODEL 39131348 protein-coding RAP2B RAP2B, member of RAS oncogene family 8811891 pseudo LOC102005936 tyrosine-protein phosphatase non-receptor type 2-like NW_004955483 1097670 1098910 - 102005936 AGCD01057640 MODEL 8861327 protein-coding LOC102004889 sterol 26-hydroxylase, mitochondrial ENCODES a protein that exhibits cholestanetetraol 26-dehydrogenase activity (ortholog); cholesterol 26-hydroxylase activity (ortholog); heme binding (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); bile acid metabolic process (ortholog); cholesterol catabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; bile acid signaling pathway; cerebrotendinous xanthomatosis pathway; ASSOCIATED WITH atherosclerosis (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955453 14601495 14647383 - 102004889 AGCD01044871;GBCE01032755;XM_005395627 XP_005395684 MODEL 8899453 protein-coding Pitpnm2 phosphatidylinositol transfer protein membrane associated 2 ENCODES a protein that exhibits calcium ion binding (ortholog); lipid carrier activity (ortholog); phosphatidylinositol transfer activity (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); positive regulation of phospholipid transport (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); high grade glioma (ortholog); melanoma (ortholog); FOUND IN cell body (ortholog); cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955482 5670827 5804037 + 102022702 AGCD01057345;AGCD01057346;AGCD01057347;AGCD01057348;GBDF01155373;XM_005403054;XM_005403055;XM_013503659;XM_013503660;XM_013503661 XP_005403111;XP_005403112;XP_013359113;XP_013359114;XP_013359115 MODEL 8815066 protein-coding Prx periaxin INVOLVED IN axon ensheathment (ortholog); nerve development (ortholog); peripheral nervous system myelin formation (ortholog); ASSOCIATED WITH asthma (ortholog); bipolar disorder (ortholog); brachydactyly (ortholog); FOUND IN anchoring junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955578 852789 873319 + 102013026 AGCD01075500;GBDI01262384;XM_005414047;XM_005414049;XM_005414050;XM_005414051;XM_005414053;XM_005414054;XM_013509650;XM_013509651;XM_013509652 XP_005414104;XP_005414106;XP_005414107;XP_005414108;XP_005414110;XP_005414111;XP_013365104;XP_013365105;XP_013365106 MODEL 8933480 protein-coding Srp68 signal recognition particle 68 ENCODES a protein that exhibits 7S RNA binding (ortholog); protein domain specific binding (ortholog); ribosome binding (ortholog); INVOLVED IN response to xenobiotic stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955506 6178184 6220255 + 102005824 AGCD01065402;AGCD01065403;GBDF01047361;XM_005407458 XP_005407515 MODEL 8972327 protein-coding Rcc1l RCC1 like ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); rRNA binding (ortholog); INVOLVED IN mitochondrial fusion (ortholog); mitochondrial large ribosomal subunit assembly (ortholog); mitochondrial small ribosomal subunit assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial membrane (ortholog) NW_004955456 13285753 13300244 - 102012283 AGCD01046583;AGCD01046584;AGCD01046585;GBBH01209062;GBDF01156653;XM_013520534 XP_013375988 MODEL 8893509 pseudo LOC102003109 zinc finger CCCH domain-containing protein 11A pseudogene NW_004955467 2952870 2954035 + 102003109 AGCD01051321 MODEL 9000533 protein-coding Trappc1 trafficking protein particle complex subunit 1 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN TRAPP complex (ortholog) NW_004955467 9010936 9012796 + 102026844 AGCD01051481;GBDF01046835;XM_005399442 XP_005399499 MODEL 8848985 ncrna LOC102010124 uncharacterized LOC102010124 NW_004955406 8915324 8930814 + 102010124 AGCD01005810;GBDF01157210;XR_259486 MODEL 9037759 ncrna LOC102016369 uncharacterized LOC102016369 NW_004955469 3101101 3110447 + 102016369 AGCD01052289;GBBH01172987;XR_263427 MODEL 9014055 protein-coding LOC102019532 melanoma-associated antigen 10-like NW_004955539 704919 709030 - 102019532 AGCD01071189;GBDF01042091;XM_005410902 XP_005410959 MODEL 8844456 protein-coding Rnd1 Rho family GTPase 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN actin filament organization (ortholog); negative regulation of cell adhesion (ortholog); neuron remodeling (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); thymoma (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); plasma membrane (ortholog) NW_004955500 7703461 7709363 - 102027878 AGCD01063941;AGCD01063942;GBCE01123466;GBDK01433841;XM_013505644 XP_013361098 MODEL 8702353 ncrna LOC102012107 uncharacterized LOC102012107 NW_004955504 1489501 1499030 + 102012107 AGCD01064841;GBDI01349444;XR_264287 MODEL 8810417 ncrna LOC102008204 uncharacterized LOC102008204 NW_004955412 4776167 4820984 - 102008204 AGCD01012604;AGCD01012605;AGCD01012606;GBDF01156686;XR_001232850;XR_001232851;XR_259970;XR_259971 MODEL 8831598 protein-coding Poln DNA polymerase nu ENCODES a protein that exhibits cyclin binding (ortholog); DNA polymerase activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); interstrand cross-link repair (ortholog); translesion synthesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955514 1214867 1342172 - 102022319 AGCD01067041;AGCD01067042;AGCD01067043;AGCD01067044;AGCD01067045;AGCD01067046;AGCD01067047;GBDJ01030074;XM_013506823;XM_013506824;XM_013506825;XM_013506826;XM_013506827;XM_013506829 XP_013362277;XP_013362278;XP_013362279;XP_013362280;XP_013362281;XP_013362283 MODEL 8958732 pseudo LOC102019872 thymosin beta-4 pseudogene NW_004955449 2991663 2991946 + 102019872 AGCD01041841;XM_005393421 MODEL 10334436 protein-coding LOC106150355 uncharacterized LOC106150355 NW_004955474 1872990 1884124 + 106150355 AGCD01054268;AGCD01054269;XM_013523096 XP_013378550 MODEL 9059073 trna Trnai-uau transfer RNA isoleucine (anticodon UAU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955468;NW_004955465;NW_004955441;NW_004955483 149799;13289424;10151035;194221 149891;13289517;10151126;194314 +;+;+;- 101978796 AGCD01037076;AGCD01050597;AGCD01051684;AGCD01057602 MODEL 8721634 protein-coding Selenom selenoprotein M INVOLVED IN adipose tissue development (ortholog); corticosterone secretion (ortholog); hormone metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955455 5294317 5303621 - 102004353 AGCD01045720;GBDF01089321;XM_005396296;XM_013520299 XP_005396353;XP_013375753 MODEL 8779405 protein-coding Snx7 sorting nexin 7 INVOLVED IN positive regulation of autophagosome assembly (ortholog); protein transport (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog) NW_004955435 3481304 3543801 + 102020604 AGCD01032788;AGCD01032789;AGCD01032790;AGCD01032791;GBCB01111236;GBCE01074188;XM_013516541 XP_013371995 MODEL 9061228 protein-coding Rpgrip1l RPGRIP1 like ENCODES a protein that exhibits thromboxane A2 receptor binding (ortholog); INVOLVED IN brain development (ortholog); camera-type eye development (ortholog); cerebellum development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anencephaly (ortholog); anxiety disorder (ortholog); FOUND IN axonemal microtubule (ortholog); axoneme (ortholog); cell-cell junction (ortholog) NW_004955433 11321504 11423981 - 102029655 AGCD01031649;AGCD01031650;AGCD01031651;AGCD01031652;GBDJ01246570;XM_005388308;XM_005388309;XM_005388310;XM_013516223 XP_005388365;XP_005388366;XP_005388367;XP_013371677 MODEL 9025653 pseudo LOC102007430 protein archease pseudogene NW_004955481 2490488 2495172 - 102007430 AGCD01056876 MODEL 8923499 protein-coding Ptpn13 protein tyrosine phosphatase non-receptor type 13 ENCODES a protein that exhibits phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cellular response to toxic substance (ortholog); negative regulation of excitatory synapse assembly (ortholog); negative regulation of protein phosphorylation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); lamellipodium (ortholog) NW_004955474 2988109 3140520 - 102019164 AGCD01054318;AGCD01054319;AGCD01054320;AGCD01054321;AGCD01054322;GBDI01182369;XM_005401347;XM_005401348;XM_005401349;XM_005401354;XM_013502736;XM_013502737;XM_013502738;XM_013502739;XM_013502740;XM_013502741;XM_013502742;XM_013502743;XM_013502744 XP_005401404;XP_005401405;XP_005401406;XP_005401411;XP_013358190;XP_013358191;XP_013358192;XP_013358193;XP_013358194;XP_013358195;XP_013358196;XP_013358197;XP_013358198 MODEL 8892063 pseudo LOC102004890 centromere protein I pseudogene NW_004955406 23401612 23413876 + 102004890 AGCD01006171;XM_005375058 MODEL 8885868 ncrna LOC102018317 uncharacterized LOC102018317 NW_004955433 20167425 20217874 - 102018317 AGCD01031882;AGCD01031883;GBDF01278148;XR_001234715;XR_261601 MODEL 39132796 snorna SNORD62 Small nucleolar RNA SNORD62 9055897 protein-coding Snx8 sorting nexin 8 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN early endosome membrane (ortholog); retromer complex (ortholog) NW_004955460 9689654 9743891 - 102023782 AGCD01048548;AGCD01048549;GBCE01097252;XM_005397825;XM_013521218 XP_005397882;XP_013376672 MODEL 8832879 protein-coding LOC102006272 zinc finger protein 474-like NW_004955521 253407 305771 + 102006272 AGCD01068134;GBDJ01215638;XM_005409288;XM_013507095;XM_013507096 XP_005409345;XP_013362549;XP_013362550 MODEL 8901854 protein-coding LOC102013325 putative spermatogenesis-associated protein 31D4 NW_004955432 3999312 4004493 + 102013325 AGCD01030686;GBDF01049444;XM_005387970;XM_005387971 XP_005388027;XP_005388028 MODEL 8911227 pseudo LOC102008568 ubiquitin-protein ligase E3C-like NW_004955532 1668535 1681482 + 102008568 AGCD01070197 MODEL 8922621 protein-coding LOC102018319 zinc finger protein 709-like NW_004955524 62567 82782 + 102018319 AGCD01068663;GBCE01006763;XM_005409477;XM_013507335;XM_013507336;XM_013507337 XP_005409534;XP_013362789;XP_013362790;XP_013362791 MODEL 8834839 protein-coding Ppp1r14a protein phosphatase 1 regulatory inhibitor subunit 14A INVOLVED IN cellular response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Mesothelioma (ortholog); stomach cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955468 1174946 1179289 + 102019585 AGCD01051760;GBCE01159119;XM_005399866 XP_005399923 MODEL 39133552 snrna U2 U2 spliceosomal RNA 8924130 protein-coding Tiprl TOR signaling pathway regulator ENCODES a protein that exhibits protein phosphatase inhibitor activity (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog) NW_004955462 8921678 8939785 - 102018696 AGCD01049331;GBDF01003611;XM_005398209;XM_005398210;XM_005398213 XP_005398266;XP_005398267;XP_005398270 MODEL 8910487 protein-coding LOC102011741 olfactory receptor 12-like NW_004955458 2309459 2310406 + 102011741 AGCD01047223;XM_005397238 XP_005397295 MODEL 730469550 snorna SNORA40 Small nucleolar RNA SNORA40 8731435 protein-coding Phf21a PHD finger protein 21A ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); suckling behavior (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN DNA repair complex (ortholog); histone deacetylase complex (ortholog); nucleoplasm (ortholog) NW_004955422 1857335 2045816 + 102012545 AGCD01022475;AGCD01022476;GBDF01089530;XM_005384052;XM_005384053;XM_005384054;XM_013514025;XM_013514026;XM_013514027;XM_013514028;XM_013514029;XM_013514030;XM_013514031;XM_013514032;XM_013514033;XM_013514034;XM_013514035;XM_013514036 XP_005384109;XP_005384110;XP_005384111;XP_013369479;XP_013369480;XP_013369481;XP_013369482;XP_013369483;XP_013369484;XP_013369485;XP_013369486;XP_013369487;XP_013369488;XP_013369489;XP_013369490 MODEL 9048278 protein-coding Rap2c RAP2C, member of RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN establishment of endothelial intestinal barrier (ortholog); negative regulation of cell migration (ortholog); Rap protein signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian cancer (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell contact zone (ortholog); cytoplasm (ortholog) NW_004955473 2709407 2723453 + 102028409 AGCD01053907;GBBH01011809;GBDF01235018;XM_005401215 XP_005401272 MODEL 8828127 ncrna LOC102010901 uncharacterized LOC102010901 NW_004955416 18447091 18476171 + 102010901 AGCD01017406;GBDF01227734;XR_260392 MODEL 10340622 ncrna LOC106147463 uncharacterized LOC106147463 NW_004955408 23159296 23162095 + 106147463 AGCD01008584;GBCQ01078839;XR_001232382 MODEL 8801184 pseudo LOC102008958 AN1-type zinc finger protein 3-like NW_004955497 478857 481296 + 102008958 AGCD01062416 MODEL 8935538 protein-coding Rgs9bp regulator of G protein signaling 9 binding protein INVOLVED IN cone photoresponse recovery (ortholog); detection of light stimulus involved in visual perception (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH bradyopsia (ortholog); bradyopsia 2 (ortholog); FOUND IN photoreceptor outer segment (ortholog) NW_004955468 5311318 5313612 - 102030513 AGCD01051963;GBCQ01162978;XM_005400087 XP_005400144 MODEL 9018057 protein-coding Plg plasminogen ENCODES a protein that exhibits apolipoprotein binding (ortholog); endopeptidase activity (ortholog); enzyme binding (ortholog); INVOLVED IN blood coagulation (ortholog); collagen catabolic process (ortholog); extracellular matrix disassembly (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Arterial Thrombosis (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955439 20317814 20366724 + 102011248 AGCD01036109;AGCD01036110;AGCD01036111;GBDI01245139;XM_005390699;XM_005390700 XP_005390756;XP_005390757 MODEL 8712453 protein-coding Prxl2a peroxiredoxin like 2A ENCODES a protein that exhibits antioxidant activity (ortholog); INVOLVED IN regulation of osteoclast differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955510 400454 420900 + 102027556 AGCD01066147;AGCD01066148;GBDJ01064130;XM_005407871;XM_005407872;XM_005407873;XM_013506334;XM_013506335 XP_005407928;XP_005407929;XP_005407930;XP_013361788;XP_013361789 MODEL 9048252 protein-coding C1qbp complement C1q binding protein ENCODES a protein that exhibits adrenergic receptor binding (ortholog); C5-methylcytidine-containing RNA reader activity (ortholog); complement component C1q complex binding (ortholog); INVOLVED IN cytosolic ribosome assembly (ortholog); mitochondrial RNA catabolic process (ortholog); negative regulation of defense response to virus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955467 10788142 10792272 - 102027161 AGCD01051583;GBDJ01090000;GBDK01129135;XM_013522096 XP_013377550 MODEL 8923945 protein-coding LOC102011292 translation initiation factor IF-2-like NW_004955411 5098018 5101336 - 102011292 AGCD01011594;GBDF01039872;XM_005377923 XP_005377980 MODEL 9055344 protein-coding Rrp9 ribosomal RNA processing 9, U3 small nucleolar RNA binding protein ENCODES a protein that exhibits U3 snoRNA binding (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Disease Progression (ortholog); FOUND IN box C/D methylation guide snoRNP complex (ortholog); nucleolus (ortholog); small-subunit processome (ortholog) NW_004955532 3584111 3591234 - 102022852 AGCD01070288;GBDJ01136397;XM_005410332 XP_005410389 MODEL 9041564 protein-coding LOC102005577 uncharacterized LOC102005577 NW_004955465 13237704 13244781 + 102005577 AGCD01050593;GBCE01177470;XM_013521808 XP_013377262 MODEL 8840978 protein-coding LOC102019533 olfactory receptor 6B2-like NW_004955542 1313123 1324139 + 102019533 AGCD01071502;XM_005411170 XP_005411227 MODEL 8716536 ncrna LOC102004137 uncharacterized LOC102004137 NW_004955404 19087590 19138303 + 102004137 AGCD01003636;AGCD01003637;AGCD01003638;AGCD01003639;GBCE01122216;XR_259319 MODEL 8904411 ncrna LOC102003110 uncharacterized LOC102003110 NW_004955468 3568605 3569514 - 102003110 AGCD01051863;GBDI01159838;XR_001236890;XR_263383 MODEL 730469375 snorna SNORA61 Small nucleolar RNA SNORA61 8912026 pseudo LOC102016370 V-type proton ATPase subunit G 1 pseudogene NW_004955469 8848432 8848785 + 102016370 AGCD01052482 MODEL 8987140 protein-coding Prkci protein kinase C iota ENCODES a protein that exhibits diacylglycerol-dependent, calcium-independent serine/threonine kinase activity (ortholog); phospholipid binding (ortholog); protein kinase activity (ortholog); INVOLVED IN actin filament organization (ortholog); cell migration (ortholog); cell-cell junction organization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; interleukin-1 signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955420 423406 486676 + 102020013 AGCD01020544;GBDF01041815;XM_005382978 XP_005383035 MODEL 9008420 protein-coding Slc35f4 solute carrier family 35 member F4 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); sarcoma (ortholog) NW_004955466 11436970 11465593 - 102028516 AGCD01051093;AGCD01051094;GBDF01105346;XM_013521882 XP_013377336 MODEL 730469346 snorna SNORA17 Small nucleolar RNA SNORA17 8852371 protein-coding Pitpnm3 PITPNM family member 3 ENCODES a protein that exhibits calcium ion binding (ortholog); receptor tyrosine kinase binding (ortholog); ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); cone-rod dystrophy (ortholog); cone-rod dystrophy 5 (ortholog); FOUND IN cell body (ortholog) NW_004955467 11973181 12051388 - 102005789 AGCD01051621;AGCD01051622;AGCD01051623;AGCD01051624;GBDI01024423;XM_005399663;XM_013522224 XP_005399720;XP_013377678 MODEL 8731939 protein-coding Srp72 signal recognition particle 72 ENCODES a protein that exhibits 7S RNA binding (ortholog); ribosome binding (ortholog); signal recognition particle binding (ortholog); ASSOCIATED WITH bone marrow disease (ortholog); Bone Marrow Failure Syndrome 1 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); signal recognition particle (ortholog) NW_004955447 14519978 14552758 - 102028144 AGCD01041011;AGCD01041012;AGCD01041013;AGCD01041014;GBDF01007031;XM_005392872 XP_005392929 MODEL 730469017 snorna SNORD109A Small nucleolar RNA SNORD109A 9057820 ncrna LOC102007431 uncharacterized LOC102007431 NW_004955482 3993841 3998952 + 102007431 AGCD01057278;GBDI01245685;XR_001231001 MODEL 8941477 protein-coding Tirap TIR domain containing adaptor protein ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Bacteremia (ortholog); Immunodeficiency 67 (ortholog); malaria (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endocytic vesicle (ortholog) NW_004955412 27303548 27315031 + 102004684 AGCD01013233;GBCE01142482;XM_005378502 XP_005378559 MODEL 8950279 protein-coding LOC102022413 synaptotagmin-15 ASSOCIATED WITH acute myeloid leukemia (ortholog); stomach cancer (ortholog); FOUND IN membrane (ortholog) NW_004955510 6130901 6145832 - 102022413 AGCD01066302;GBDF01305008;XM_005415248 XP_005415305 MODEL 9065919 ncrna LOC102010129 uncharacterized LOC102010129 NW_004955457 12742119 12748992 + 102010129 AGCD01047026;GBCB01083718;XR_262945 MODEL 8898630 protein-coding Rapgef1 Rap guanine nucleotide exchange factor 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to nerve growth factor stimulus (ortholog); establishment of endothelial barrier (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; E-cadherin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anti-basement membrane glomerulonephritis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955513 1224418 1328176 - 102024834 AGCD01066849;AGCD01066850;AGCD01066851;GBDK01129240;XM_013506678;XM_013506679;XM_013506680;XM_013506681;XM_013506682;XM_013506683;XM_013506684;XM_013506685 XP_013362132;XP_013362133;XP_013362134;XP_013362135;XP_013362136;XP_013362137;XP_013362138;XP_013362139 MODEL 9026353 protein-coding Rnd2 Rho family GTPase 2 INVOLVED IN positive regulation of collateral sprouting (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN early endosome (ortholog) NW_004955451 16806527 16809091 + 102029580 AGCD01043709;GBBH01228170;XM_005394495 XP_005394552 MODEL 8930574 protein-coding LOC102012115 retinal dehydrogenase 1-like NW_004955512 5973700 6028923 - 102012115 AGCD01066790;AGCD01066791;AGCD01066792;AGCD01066793;AGCD01066794;AGCD01066795;AGCD01066796;AGCD01066797;AGCD01066798;AGCD01066799;AGCD01066800;AGCD01066801;GBCQ01010585;GBDK01002218;XM_013506549 XP_013362003 MODEL 8886647 pseudo LOC102019873 aldose reductase-related protein 2 pseudogene NW_004955450 7501266 7502482 - 102019873 AGCD01042539 MODEL 8705649 protein-coding Trappc10 trafficking protein particle complex subunit 10 INVOLVED IN intra-Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH agnathia-otocephaly complex (ortholog); Arsenic Poisoning (ortholog); Breast Cancer, Familial (ortholog); FOUND IN TRAPP complex (ortholog) NW_004955407 41271526 41347850 - 102029827 AGCD01007863;AGCD01007864;GBCQ01072221;GBDF01089628;XM_005375874 XP_005375931 MODEL 8935205 pseudo LOC102008572 E3 ubiquitin-protein ligase RING2 pseudogene NW_004955439 2667966 2668976 - 102008572 AGCD01035656 MODEL 8709743 trna Trnak-cuu transfer RNA lysine (anticodon CUU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978827 AGCD01037806;AGCD01051106;AGCD01057606;AGCD01069830;AGCD01074502 MODEL 8708921 protein-coding Polq DNA polymerase theta ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); ATP hydrolysis activity (ortholog); chromatin binding (ortholog); INVOLVED IN base-excision repair (ortholog); DNA damage response (ortholog); DNA repair (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome (ortholog); mitochondrial nucleoid (ortholog); nucleoplasm (ortholog) NW_004955427 20779332 20895094 - 102029881 AGCD01027416;AGCD01027417;AGCD01027418;AGCD01027419;AGCD01027420;AGCD01027421;AGCD01027422;AGCD01027423;GBDJ01300677;XM_005386484;XM_013515227;XM_013515228 XP_005386541;XP_013370681;XP_013370682 MODEL 8999609 protein-coding Snx9 sorting nexin 9 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); Arp2/3 complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN cleavage furrow formation (ortholog); endocytosis (ortholog); endosomal transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); cuticular plate (ortholog) NW_004955439 4422385 4503408 - 102015984 AGCD01035709;AGCD01035710;AGCD01035711;GBDI01118897;XM_005390533 XP_005390590 MODEL 8881462 protein-coding LOC102018320 zinc finger protein OZF-like NW_004955524 2146250 2150075 - 102018320 AGCD01068800;GBCE01006151;XM_005409651 XP_005409708 MODEL 8885495 protein-coding Selenon selenoprotein N ENCODES a protein that exhibits mitochondrion-endoplasmic reticulum membrane tether activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); calcium ion homeostasis (ortholog); calcium ion import (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); autistic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog) NW_004955452 5295716 5311113 + 102008372 AGCD01044015;AGCD01044016;AGCD01044017;GBBH01143587;GBCE01116282;XM_013519601 XP_013375055 MODEL 8731185 protein-coding Sftpb surfactant protein B INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to nitric oxide (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); asthma (ortholog); FOUND IN alveolar lamellar body (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955424 1849313 1858087 + 102025136 AGCD01024248;GBDK01014342;XM_005385414;XM_005385415;XM_005385416;XM_005385417 XP_005385471;XP_005385472;XP_005385473;XP_005385474 MODEL 8782842 ncrna LOC102011744 uncharacterized LOC102011744 NW_004955459 4423019 4424874 - 102011744 AGCD01048026;GBDF01144191;XR_263015 MODEL 8716639 protein-coding Rph3a rabphilin 3A ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); INVOLVED IN dendritic spine organization (ortholog); spontaneous neurotransmitter secretion (ortholog); synaptic vesicle priming (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); Deglutition Disorders (ortholog); FOUND IN cholinergic synapse (ortholog); dendritic spine (ortholog); extrinsic component of membrane (ortholog) NW_004955482 9190137 9312596 + 102010485 AGCD01057563;AGCD01057564;GBDI01143739;XM_005403200;XM_005403201;XM_005403202;XM_005403203;XM_005403204;XM_005403205;XM_005403206;XM_005403207;XM_013503738 XP_005403257;XP_005403258;XP_005403259;XP_005403260;XP_005403261;XP_005403262;XP_005403263;XP_005403264;XP_013359192 MODEL 8754338 protein-coding Pitrm1 pitrilysin metallopeptidase 1 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive spinocerebellar ataxia 30 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955421 28010756 28041336 + 102020925 AGCD01022304;AGCD01022305;AGCD01022306;GBCE01076483;GBDF01157422;XM_013513654 XP_013369108 MODEL 8988418 protein-coding Rgsl1 regulator of G protein signaling like 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955406 21274546 21395534 + 102016666 AGCD01006121;AGCD01006122;AGCD01006123;AGCD01006124;AGCD01006125;AGCD01006126;AGCD01006127;GBDF01194182;GBDF01194183;XM_013521438 XP_013376892 MODEL 8865060 protein-coding Wdr41 WD repeat domain 41 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of autophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); guanyl-nucleotide exchange factor complex (ortholog) NW_004955425 23366130 23510897 + 102016494 AGCD01025845;AGCD01025846;GBDF01088944;XM_005386025;XM_013514857 XP_005386082;XP_013370311 MODEL 8758135 protein-coding C1qc complement C1q C chain ENCODES a protein that exhibits IgG binding (ortholog); IgM binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); negative regulation of granulocyte differentiation (ortholog); negative regulation of macrophage differentiation (ortholog); ASSOCIATED WITH C1q Deficiency (ortholog); C1q Deficiency 3 (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); complement component C1 complex (ortholog); complement component C1q complex (ortholog) NW_004955452 2759079 2762522 + 102009794 AGCD01043903;GBDI01004925;XM_005394744 XP_005394801 MODEL 8889380 protein-coding Eprs1 glutamyl-prolyl-tRNA synthetase 1 ENCODES a protein that exhibits glutamate-tRNA ligase activity (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to type II interferon (ortholog); glutamyl-tRNA aminoacylation (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955520 3550558 3606015 + 102025157 AGCD01068105;AGCD01068106;GBDF01046961;XM_005409277 XP_005409334 MODEL 8903338 pseudo LOC102006273 methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial pseudogene NW_004955522 3958620 3960291 + 102006273 AGCD01068410 MODEL 8818367 protein-coding Lonp1 lon peptidase 1, mitochondrial ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN 'de novo' protein folding (ortholog); cellular response to oxidative stress (ortholog); mitochondrial protein catabolic process (ortholog); ASSOCIATED WITH Addison's disease (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955495 3712173 3729556 + 102024354 AGCD01061879;GBDI01075951;XM_005405760;XM_013505197 XP_005405817;XP_013360651 MODEL 10301230 protein-coding Spegnb SPEG neighbor NW_004955453 13974409 13976490 - 106149770 AGCD01044855;GBCQ01102701;XM_013519765 XP_013375219 MODEL 730469374 snorna SNORA17 Small nucleolar RNA SNORA17 39133553 snrna U2 U2 spliceosomal RNA 8856685 protein-coding Prkcq protein kinase C theta ENCODES a protein that exhibits diacylglycerol-dependent serine/threonine kinase activity (ortholog); diacylglycerol-dependent, calcium-independent serine/threonine kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cell chemotaxis (ortholog); intracellular signal transduction (ortholog); membrane protein ectodomain proteolysis (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); immunological synapse (ortholog) NW_004955421 23072607 23151591 - 102005151 AGCD01022171;AGCD01022172;AGCD01022173;GBDI01221492;XM_005383869;XM_013513782 XP_005383926;XP_013369236 MODEL 8900280 protein-coding Rcc2 regulator of chromosome condensation 2 ENCODES a protein that exhibits microtubule binding (ortholog); protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN chromosome passenger complex localization to kinetochore (ortholog); establishment of protein localization (ortholog); focal adhesion assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric core domain (ortholog); early endosome membrane (ortholog) NW_004955527 1490179 1512111 + 102019102 AGCD01069404;AGCD01069405;AGCD01069406;AGCD01069407;GBCE01077274;GBDJ01083813;XM_013507406 XP_013362860 MODEL 8808506 protein-coding Ppp1r14b protein phosphatase 1 regulatory inhibitor subunit 14B ENCODES a protein that exhibits phosphatase inhibitor activity (ortholog); protein phosphatase regulator activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955422 20832224 20834317 + 102022305 AGCD01023092;GBDI01006659;GBDJ01006929;XM_005384972 XP_005385029 MODEL 39133494 snrna U4 U4 spliceosomal RNA 8758735 protein-coding LOC102004893 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like NW_004955406 39002433 39011241 - 102004893 AGCD01006617;GBDF01120954;XM_005375239;XM_013522480;XM_013522484;XM_013522488 XP_005375296;XP_013377934;XP_013377938;XP_013377942 MODEL 9027258 pseudo LOC102010903 60S ribosomal protein L18a pseudogene NW_004955481 3813679 3814552 + 102010903 AGCD01056916 MODEL 8755196 protein-coding Phf21b PHD finger protein 21B ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955413 29442357 29507060 - 102026849 AGCD01014584;AGCD01014585;AGCD01014586;GBDJ01390489;XM_005379472;XM_005379473;XM_005379474 XP_005379529;XP_005379530;XP_005379531 MODEL 8927319 ncrna LOC102008960 uncharacterized LOC102008960 NW_004955500 4757497 4758238 - 102008960 AGCD01063810;XR_264224 MODEL 39132799 snorna SNORD62 Small nucleolar RNA SNORD62 8833789 protein-coding Ptpn14 protein tyrosine phosphatase non-receptor type 14 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); receptor tyrosine kinase binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN lymphangiogenesis (ortholog); negative regulation of cell population proliferation (ortholog); regulation of protein export from nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955406 3368833 3463170 + 102012155 AGCD01005671;AGCD01005672;GBCE01077552;XM_005374719;XM_013519964 XP_005374776;XP_013375418 MODEL 8942158 pseudo LOC102005937 olfactory receptor 2S2-like NW_004955419 21770973 21771933 + 102005937 AGCD01020283 MODEL 9026854 protein-coding LOC102011750 interstitial collagenase NW_004955412 5994105 6001239 - 102011750 AGCD01012662;XM_005378615 XP_005378672 MODEL 8730163 pseudo LOC102010130 olfactory receptor 1361-like NW_004955408 1554851 1556907 + 102010130 AGCD01007965 MODEL 8972892 protein-coding Prxl2b peroxiredoxin like 2B ENCODES a protein that exhibits oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (ortholog); prostaglandin F synthase activity (ortholog); prostaglandin H2 endoperoxidase reductase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); prostaglandin biosynthetic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955486 8663708 8666369 - 102004825 AGCD01059153;GBBH01145866;XM_005404161 XP_005404218 MODEL 8902492 ncrna LOC102019535 uncharacterized LOC102019535 NW_004955439 136492 145739 + 102019535 AGCD01035579;AGCD01035580;GBDI01211031;XR_001235216 MODEL 10323062 ncrna LOC106147464 uncharacterized LOC106147464 NW_004955564 342564 349986 + 106147464 AGCD01074199;AGCD01074200;XR_001232381 MODEL 8836712 pseudo LOC102005578 Y+L amino acid transporter 2 pseudogene NW_004955466 2383953 2385889 - 102005578 AGCD01050736 MODEL 10220772 pseudo LOC102011300 Ig heavy chain V-I region 5-like NW_004955470 472783 473374 - 102011300 AGCD01052614 MODEL 8811857 pseudo LOC102003112 olfactory receptor 10J4-like NW_004955468 11229311 11232918 + 102003112 AGCD01052123 MODEL 9049718 ncrna LOC102013327 uncharacterized LOC102013327 NW_004955515 1287451 1288282 - 102013327 AGCD01067223;GBDF01052083;XR_264519 MODEL 730468980 snorna SNORA61 Small nucleolar RNA SNORA61 8921404 pseudo LOC102016371 ribosome biogenesis protein NSA2 homolog pseudogene NW_004955470 6566274 6569082 + 102016371 AGCD01052773 MODEL 8904669 protein-coding Rnd3 Rho family GTPase 3 ASSOCIATED WITH hepatocellular carcinoma (ortholog); high grade glioma (ortholog); lung cancer (ortholog) NW_004955440 16106555 16113337 - 102018652 AGCD01036511;GBDJ01010111;GBDJ01010113;XM_013517502 XP_013372956 MODEL 9065816 protein-coding Slc35f5 solute carrier family 35 member F5 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955459 15407686 15440536 + 102030285 AGCD01048322;GBBH01117606;GBCC01033256;XM_013521078 XP_013376532 MODEL 8779096 pseudo LOC102007433 olfactory receptor 2T10-like NW_004955418 29702702 29708070 - 102007433 AGCD01019480 MODEL 8753406 protein-coding LOC102008206 olfactory receptor 2B6-like NW_004955465 13463709 13464717 + 102008206 AGCD01050609;XM_005398954 XP_005399011 MODEL 8778712 protein-coding Selenoo selenoprotein O ENCODES a protein that exhibits AMPylase activity (ortholog); NAD+ diphosphatase activity (ortholog); NADH pyrophosphatase activity (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN chromosome (ortholog); mitochondrion (ortholog) NW_004955413 33235382 33253484 + 102025109 AGCD01014658;AGCD01014659;AGCD01014660;GBCE01098443;GBDF01287290;XM_005379554 XP_005379611 MODEL 8963159 protein-coding Srp9 signal recognition particle 9 PARTICIPATES IN interleukin-3 signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955520 163713 168507 - 102004745 AGCD01068009;GBCE01002526;XM_005409214 XP_005409271 MODEL 39133495 snrna U4 U4 spliceosomal RNA 9061998 pseudo LOC102004895 60S acidic ribosomal protein P0-like NW_004955406 38088292 38103146 + 102004895 AGCD01006590;AGCD01006591;AGCD01006592;AGCD01006593;AGCD01006594 MODEL 9018643 protein-coding Tjap1 tight junction associated protein 1 INVOLVED IN Golgi organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); Golgi apparatus (ortholog) NW_004955437 9314472 9337021 + 102008661 AGCD01034525;AGCD01034526;GBCE01098674;XM_005389769;XM_005389770;XM_005389773;XM_005389774;XM_005389776;XM_013516816;XM_013516818;XM_013516819 XP_005389826;XP_005389827;XP_005389830;XP_005389831;XP_005389833;XP_013372270;XP_013372272;XP_013372273 MODEL 8850129 protein-coding Rapgef2 Rap guanine nucleotide exchange factor 2 ENCODES a protein that exhibits beta-1 adrenergic receptor binding (ortholog); cAMP binding (ortholog); cGMP binding (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); blood vessel development (ortholog); PARTICIPATES IN adenosine signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal cancer (ortholog); familial adult myoclonic epilepsy 7 (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) NW_004955471 12670837 12838910 + 102020438 AGCD01053303;AGCD01053304;AGCD01053305;AGCD01053306;AGCD01053307;AGCD01053308;GBCE01137795;GBDF01084835;XM_013522900 XP_013378354 MODEL 9005175 protein-coding Pitx1 paired like homeodomain 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN branchiomeric skeletal muscle development (ortholog); cartilage development (ortholog); embryonic hindlimb morphogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); clubfoot (ortholog); Dwarfism (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955408 30197374 30202887 - 102029268 AGCD01008801;GBBH01032244;GBDJ01050164;XM_013507081 XP_013362535 MODEL 730469380 snorna SNORA40 Small nucleolar RNA SNORA40 8848071 protein-coding Rhag Rh associated glycoprotein ENCODES a protein that exhibits ammonium channel activity (ortholog); ankyrin binding (ortholog); carbon dioxide transmembrane transporter activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); carbon dioxide transmembrane transport (ortholog); carbon dioxide transport (ortholog); ASSOCIATED WITH developmental dysplasia of the hip (ortholog); hemolytic anemia (ortholog); Hepatomegaly (ortholog); FOUND IN ankyrin-1 complex (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955411 8335223 8354430 + 102006754 AGCD01011727;GBBH01082480;XM_005377673 XP_005377730 MODEL 8929737 protein-coding Psap prosaposin ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); ganglioside GM1 binding (ortholog); ganglioside GM2 binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); antigen processing and presentation (ortholog); cellular response to reactive oxygen species (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atypical Gaucher's disease due to saposin C deficiency (ortholog); Atypical Krabbe Disease due to Saposin A Deficiency (ortholog); FOUND IN aggresome (ortholog); cytoplasm (ortholog); endolysosomal intralumenal vesicle membrane (ortholog) NW_004955437 19667252 19683669 + 102024848 AGCD01034865;GBBH01002383;XM_013516831;XM_013516832;XM_013516833;XM_013516835;XM_013516836;XM_013516837 XP_013372285;XP_013372286;XP_013372287;XP_013372289;XP_013372290;XP_013372291 MODEL 8959937 ncrna LOC102012121 uncharacterized LOC102012121 NW_004955435 13285870 13323570 + 102012121 AGCD01033200;GBDF01292749;XR_001234893;XR_001234894;XR_261685 MODEL 8768279 ncrna LOC102006276 uncharacterized LOC102006276 NW_004955435 16129063 16131676 + 102006276 AGCD01033295;GBCB01093390;XR_001234853;XR_261702 MODEL 8938369 pseudo LOC102019875 uncharacterized protein C10orf88 homolog pseudogene NW_004955599 206585 207707 + 102019875 AGCD01076630 MODEL 8825298 trna Trnak-uuu transfer RNA lysine (anticodon UUU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978826 AGCD01006660;AGCD01022734;AGCD01040255;AGCD01042735;AGCD01050592;AGCD01050596;AGCD01050635;AGCD01051475;AGCD01054570;AGCD01066489;AGCD01066490 MODEL 8725545 pseudo LOC102013333 prefoldin subunit 4-like NW_004955530 2262235 2268611 + 102013333 AGCD01069911 MODEL 8864750 protein-coding Trappc11 trafficking protein particle complex subunit 11 INVOLVED IN constitutive secretory pathway (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnoid Cysts (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); FOUND IN Golgi apparatus (ortholog); TRAPP complex (ortholog) NW_004955403 25168212 25211344 - 102008808 AGCD01002283;GBCQ01149377;XM_005373500;XR_001233561 XP_005373557 MODEL 616940638 snorna SNORD11 Small nucleolar RNA SNORD11 9009879 protein-coding LOC102018323 melanoma-associated antigen B1-like NW_004955531 614018 615601 - 102018323 AGCD01070003;GBDF01126490;GBDF01126491;XM_005410132 XP_005410189 MODEL 8793518 protein-coding Soat1 sterol O-acyltransferase 1 ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol O-acyltransferase activity (ortholog); fatty-acyl-CoA binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); aortic atherosclerosis (ortholog); atherosclerosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955406 18644351 18708666 + 102022462 AGCD01006051;AGCD01006052;AGCD01006053;AGCD01006054;AGCD01006055;AGCD01006056;AGCD01006057;GBBH01180582;GBDJ01300596;XM_013521162 XP_013376616 MODEL 9017971 protein-coding Ppp1r14c protein phosphatase 1 regulatory inhibitor subunit 14C ENCODES a protein that exhibits protein serine/threonine phosphatase inhibitor activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Coronavirus infectious disease (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955439 11142520 11238660 - 102005843 AGCD01035892;AGCD01035893;GBDI01117555;XM_005390591;XM_013517322;XM_013517323;XR_001235188;XR_001235189;XR_001235190;XR_001235191;XR_001235192;XR_001235193;XR_261978;XR_261979 XP_005390648;XP_013372776;XP_013372777 MODEL 8750907 ncrna LOC102004139 uncharacterized LOC102004139 NW_004955405 42055348 42065223 + 102004139 AGCD01005576;GBBH01086245;XR_259457 MODEL 8979537 protein-coding Rph3al rabphilin 3A like (without C2 domains) ENCODES a protein that exhibits LIM domain binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); negative regulation of G protein-coupled receptor signaling pathway (ortholog); positive regulation of insulin secretion (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN secretory granule (ortholog) NW_004955481 1903361 2054891 - 102024461 AGCD01056856;AGCD01056857;AGCD01056858;AGCD01056859;AGCD01056860;AGCD01056861;GBBH01224998;XM_005402633;XM_005402634;XM_013503516;XM_013503517;XM_013503518;XM_013503519;XM_013503520 XP_005402690;XP_005402691;XP_013358970;XP_013358971;XP_013358972;XP_013358973;XP_013358974 MODEL 8963940 protein-coding LOC102005583 apolipoprotein L2-like NW_004955413 22371700 22393689 - 102005583 AGCD01014294;AGCD01014295;AGCD01014296;AGCD01014297;AGCD01014298;AGCD01014299;XM_005379646 XP_005379703 MODEL 9037052 protein-coding Spem1 spermatid maturation 1 INVOLVED IN flagellated sperm motility (ortholog); sperm individualization (ortholog); spermatogenesis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955467 9503229 9504535 - 102015494 AGCD01051513;GBDJ01195970;XM_005399499;XM_013522043 XP_005399556;XP_013377497 MODEL 10197077 protein-coding Rrs1 regulator of ribosome synthesis 1 ENCODES a protein that exhibits 5S rRNA binding (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); mitotic metaphase chromosome alignment (ortholog); protein localization to nucleolus (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN condensed nuclear chromosome (ortholog); endoplasmic reticulum (ortholog); nucleolus (ortholog) NW_004955444 12740172 12751674 - 106146256 AGCD01039081;GBDI01119105;XM_013518191;XM_013518192;XM_013518193;XR_262264 XP_013373645;XP_013373646;XP_013373647 MODEL 8880539 protein-coding Lonp2 lon peptidase 2, peroxisomal ENCODES a protein that exhibits enzyme binding (ortholog); peptidase activity (ortholog); protease binding (ortholog); INVOLVED IN protein processing (ortholog); protein targeting to peroxisome (ortholog); regulation of fatty acid beta-oxidation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); peroxisomal matrix (ortholog) NW_004955474 6991371 7084008 - 102007888 AGCD01054512;AGCD01054513;GBDI01079460;XM_005401402 XP_005401459 MODEL 730469439 snorna SNORA18 Small nucleolar RNA SNORA18 8949575 protein-coding Polr1a RNA polymerase I subunit A ENCODES a protein that exhibits 5'-3' RNA polymerase activity (ortholog); chromatin binding (ortholog); DNA-directed RNA polymerase activity (ortholog); INVOLVED IN negative regulation of protein localization to nucleolus (ortholog); rRNA transcription (ortholog); transcription by RNA polymerase I (ortholog); PARTICIPATES IN nucleotide excision repair pathway; RNA polymerase I transcription pathway; ASSOCIATED WITH acrofacial dysostosis Cincinnati type (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); fibrillar center (ortholog) NW_004955424 1507935 1595068 + 102021143 AGCD01024237;AGCD01024238;AGCD01024239;AGCD01024240;GBDK01177247;XM_005385408;XM_005385411 XP_005385465;XP_005385468 MODEL 8864331 protein-coding LOC102022414 membrane-spanning 4-domains subfamily A member 4A NW_004955511 5154898 5183422 + 102022414 AGCD01066549;GBDI01285041;XM_005408087;XM_005408088;XM_005408089;XM_013506507 XP_005408144;XP_005408145;XP_005408146;XP_013361961 MODEL 8702184 protein-coding Sftpc surfactant protein C ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to nitric oxide (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); asthma (ortholog); bacterial pneumonia (ortholog); FOUND IN alveolar lamellar body (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955403 45649149 45651421 + 102004547 AGCD01002825;GBDK01013470;XM_005373651;XM_005373652 XP_005373708;XP_005373709 MODEL 9030817 protein-coding Phf23 PHD finger protein 23 INVOLVED IN negative regulation of autophagosome assembly (ortholog); negative regulation of autophagosome maturation (ortholog); positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955467 9671133 9675434 + 102026514 AGCD01051521;GBDJ01230131;XM_005399540;XM_005399541 XP_005399597;XP_005399598 MODEL 9000811 ncrna LOC102008961 uncharacterized LOC102008961 NW_004955500 7699030 7703323 + 102008961 AGCD01063941;GBDF01005578;XR_001231468 MODEL 8946473 protein-coding Rccd1 RCC1 domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN chromosome (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955416 15013595 15020038 + 102013932 AGCD01017295;AGCD01017296;GBBH01229064;GBCQ01035929;XM_013512477 XP_013367931 MODEL 9031176 protein-coding LOC102010909 zinc finger protein 621 NW_004955420 29420972 29427337 - 102010909 AGCD01021500;GBDF01074480;XM_005383573;XM_005383574;XM_013513402;XM_013513403;XM_013513404;XM_013513405;XM_013513406;XM_013513407 XP_005383630;XP_005383631;XP_013368856;XP_013368857;XP_013368858;XP_013368859;XP_013368860;XP_013368861 MODEL 9033701 ncrna LOC102005939 uncharacterized LOC102005939 NW_004955420 14870439 14874125 + 102005939 AGCD01020956;GBDI01175768;XR_001233663;XR_001233664;XR_001233665 MODEL 8988367 pseudo LOC102011759 coiled-coil domain-containing protein 117 pseudogene NW_004955414 22445100 22446162 - 102011759 AGCD01015456 MODEL 9039936 protein-coding LOC102018324 chromosome unknown open reading frame, human C6orf47 ASSOCIATED WITH hereditary spastic paraplegia 86 (ortholog) NW_004955437 192873 195159 - 102018324 AGCD01034108;GBCB01075013;XM_005389347 XP_005389404 MODEL 9035916 pseudo LOC102004140 tRNA methyltransferase 10 homolog A pseudogene NW_004955453 3075154 3075940 - 102004140 AGCD01044648 MODEL 8872215 protein-coding Wdr43 WD repeat domain 43 ENCODES a protein that exhibits RNA polymerase II complex binding (ortholog); transcription elongation factor activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); regulation of stem cell population maintenance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); fibrillar center (ortholog); nucleolus (ortholog) NW_004955469 10777332 10835577 + 102016256 AGCD01052550;AGCD01052551;GBDF01226152;XM_005400538;XM_005400539 XP_005400595;XP_005400596 MODEL 8792407 protein-coding LOC102010135 potassium channel subfamily U member 1 NW_004955463 12558868 12692079 + 102010135 AGCD01049855;AGCD01049856;GBDF01257773;XM_005398473 XP_005398530 MODEL 8748365 pseudo LOC102019537 V-type proton ATPase subunit E 1-like NW_004955545 693641 698066 + 102019537 AGCD01071813 MODEL 8841814 protein-coding Eps15 epidermal growth factor receptor pathway substrate 15 ENCODES a protein that exhibits identical protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); endocytic recycling (ortholog); Golgi to endosome transport (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; Notch signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN aggresome (ortholog); AP-2 adaptor complex (ortholog); apical plasma membrane (ortholog) NW_004955464 7569570 7688098 + 102025773 AGCD01050065;AGCD01050066;AGCD01050067;GBCB01020993;XM_005398604;XM_013521700;XM_013521701;XM_013521702 XP_005398661;XP_013377154;XP_013377155;XP_013377156 MODEL 730469040 snorna SNORA61 Small nucleolar RNA SNORA61 8830654 protein-coding LOC102011301 olfactory receptor 56B1-like NW_004955414 21711391 21712350 + 102011301 AGCD01015429;XM_005380104 XP_005380161 MODEL 8771812 protein-coding Tjp1 tight junction protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); connexin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); adherens junction maintenance (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); bile duct cancer (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); apical junction complex (ortholog) NW_004955416 28640807 28869717 + 102012321 AGCD01017634;AGCD01017635;AGCD01017636;AGCD01017637;AGCD01017638;GBDF01053729;XM_005381650;XM_005381653;XM_005381654;XM_005381656;XM_005381657 XP_005381707;XP_005381710;XP_005381711;XP_005381713;XP_005381714 MODEL 9035853 pseudo LOC102003114 40S ribosomal protein S2 pseudogene NW_004955469 9118926 9122699 - 102003114 AGCD01052491 MODEL 39133555 snrna U2 U2 spliceosomal RNA 8825967 protein-coding Slc35f6 solute carrier family 35 member F6 INVOLVED IN negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN lysosomal membrane (ortholog); lysosome (ortholog); mitochondrion (ortholog) NW_004955469 8774225 8787549 + 102015500 AGCD01052481;AGCD01052482;GBDF01281490;XM_005400439 XP_005400496 MODEL 8896661 protein-coding Rnf10 ring finger protein 10 ENCODES a protein that exhibits transcription cis-regulatory region binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of Schwann cell proliferation (ortholog); nonfunctional rRNA decay (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiotoxicity (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); extrinsic component of postsynaptic density membrane (ortholog) NW_004955455 11074118 11119771 - 102019470 AGCD01045978;AGCD01045979;AGCD01045980;AGCD01045981;AGCD01045982;AGCD01045983;GBBH01031994;GBCB01006395;XM_013520422 XP_013375876 MODEL 8984416 protein-coding LOC102006285 vegetative cell wall protein gp1-like NW_004955546 1258104 1261505 - 102006285 AGCD01072044;GBDF01260251;XM_005411765;XM_005411766 XP_005411822;XP_005411823 MODEL 8974532 protein-coding Plgrkt plasminogen receptor with a C-terminal lysine INVOLVED IN positive regulation of plasminogen activation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); high grade glioma (ortholog); FOUND IN mitochondrion (ortholog); plasma membrane (ortholog) NW_004955434 9424793 9468055 - 102030660 AGCD01032301;AGCD01032302;AGCD01032303;GBDJ01355387;XM_005388659 XP_005388716 MODEL 730469212 snorna SNORD65 Small nucleolar RNA SNORD65 8890548 protein-coding Psapl1 prosaposin like 1 FOUND IN cytosol (ortholog) NW_004955514 3229519 3232393 + 102014388 AGCD01067093;GBBH01032132;XM_005408794 XP_005408851 MODEL 10178924 ncrna LOC106147465 uncharacterized LOC106147465 NW_004955565 1711711 1723510 + 106147465 AGCD01074329;XR_001232388 MODEL 8911222 protein-coding C1ql1 complement C1q like 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN maintenance of synapse structure (ortholog); motor learning (ortholog); neuron remodeling (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); climbing fiber (ortholog); cytoplasm (ortholog) NW_004955451 17729106 17734657 - 102008049 AGCD01043769;GBBH01106823;GBCQ01122993;XM_005394651 XP_005394708 MODEL 8739864 protein-coding Srpk1 SRSF protein kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); intracellular signal transduction (ortholog); negative regulation of viral genome replication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955437 3664290 3729832 - 102003801 AGCD01034331;AGCD01034332;AGCD01034333;GBDF01002110;GBDI01120434;XM_005389568 XP_005389625 MODEL 8938760 protein-coding LOC102008207 glutathione peroxidase 6 NW_004955465 13770938 13774725 - 102008207 AGCD01050623;GBBH01092321;GBDJ01389285;XM_013521797 XP_013377251 MODEL 8726727 protein-coding Ptpn18 protein tyrosine phosphatase non-receptor type 18 ENCODES a protein that exhibits non-membrane spanning protein tyrosine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN blastocyst formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955459 65191 90459 + 102012407 AGCD01047924;GBDK01194260;XM_005397542;XM_005397543;XM_005397544 XP_005397599;XP_005397600;XP_005397601 MODEL 8855019 protein-coding Selenop selenoprotein P ENCODES a protein that exhibits selenium binding (ortholog); INVOLVED IN brain development (ortholog); locomotory behavior (ortholog); post-embryonic development (ortholog); ASSOCIATED WITH adenoma (ortholog); Animal Mammary Neoplasms (ortholog); Cadmium Poisoning (ortholog); FOUND IN extracellular region (ortholog) NW_004955426 26951003 26961839 - 102029203 AGCD01026791;GBCE01003987;XM_005386255;XM_013514989 XP_005386312;XP_013370443 MODEL 8737194 protein-coding LOC102008576 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-like NW_004955546 1452766 1495831 + 102008576 AGCD01072068;AGCD01072069;GBBH01214822;GBDI01370020;XM_013508414 XP_013363868 MODEL 8930688 ncrna LOC102016374 uncharacterized LOC102016374 NW_004955473 5770425 5807446 + 102016374 AGCD01053983;AGCD01053984;XR_263582 MODEL 8963946 ncrna LOC102005587 uncharacterized LOC102005587 NW_004955470 11311958 11314586 - 102005587 AGCD01052885;GBDF01111978;XR_263502 MODEL 730469418 snorna SNORA40 Small nucleolar RNA SNORA40 8739743 protein-coding Prkcsh PRKCSH beta subunit of glucosidase II ENCODES a protein that exhibits calcium ion binding (ortholog); phosphoprotein binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); liver development (ortholog); N-glycan processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); glucosidase II complex (ortholog) NW_004955495 2331075 2338479 + 102023373 AGCD01061767;GBCQ01000664;XM_005405665;XM_013505112 XP_005405722;XP_013360566 MODEL 8769289 protein-coding Rapgef3 Rap guanine nucleotide exchange factor 3 ENCODES a protein that exhibits cAMP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN artery development (ortholog); associative learning (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN adenosine signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); amyloidosis (ortholog); Arterial Injury (ortholog); FOUND IN apical part of cell (ortholog); axon terminus (ortholog); basal plasma membrane (ortholog) NW_004955500 6655056 6674311 - 102021367 AGCD01063889;GBCE01117886;GBDK01021143;XM_005406623 XP_005406680 MODEL 8765725 protein-coding LOC102012123 uncharacterized LOC102012123 NW_004955436 1773036 1779567 - 102012123 AGCD01033588;AGCD01033589;GBDF01021603;XM_013516581 XP_013372035 MODEL 8902361 ncrna LOC102013334 uncharacterized LOC102013334 NW_004955437 4653031 4657091 + 102013334 AGCD01034368;GBDF01122062;XR_261851 MODEL 405822147 snorna SNORD110 Small nucleolar RNA SNORD110 8795640 protein-coding Spem2 SPEM family member 2 ASSOCIATED WITH cervical cancer (ortholog) NW_004955467 9493708 9500466 - 102014760 AGCD01051513;GBDF01002193;XM_005399496;XM_005399497;XM_013522025 XP_005399553;XP_005399554;XP_013377479 MODEL 39133496 snrna U4 U4 spliceosomal RNA 8916792 protein-coding Trappc12 trafficking protein particle complex subunit 12 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Aortic Calcification (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog); kinetochore (ortholog) NW_004955487 3824872 3863859 - 102019177 AGCD01059294;AGCD01059295;GBDF01120062;XM_005404378 XP_005404435 MODEL 8701115 protein-coding Soat2 sterol O-acyltransferase 2 ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol O-acyltransferase activity (ortholog); fatty-acyl-CoA binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol metabolic process (ortholog); cholesterol storage (ortholog); PARTICIPATES IN kidney failure pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriosclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN brush border (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955458 383123 394003 + 102012287 AGCD01047122;AGCD01047123;GBCQ01096818;XM_005397145;XM_005397147;XM_005397148;XM_005397150;XM_005397151;XM_013521027;XM_013521028 XP_005397202;XP_005397204;XP_005397205;XP_005397207;XP_005397208;XP_013376481;XP_013376482 MODEL 8866214 protein-coding LOC102004898 uncharacterized LOC102004898 NW_004955407 18817496 18870851 - 102004898 AGCD01007282;AGCD01007283;AGCD01007284;AGCD01007285;AGCD01007286;GBDF01036000;XM_013505906 XP_013361360 MODEL 8792843 protein-coding Ppp1r14d protein phosphatase 1 regulatory inhibitor subunit 14D ENCODES a protein that exhibits protein serine/threonine phosphatase inhibitor activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955416 7681138 7693644 - 102028187 AGCD01017001;AGCD01017002;AGCD01017003;GBDI01254082;XM_005381265;XM_013512622 XP_005381322;XP_013368076 MODEL 8864851 protein-coding Rpia ribose 5-phosphate isomerase A ENCODES a protein that exhibits carbohydrate binding (ortholog); identical protein binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN pentose-phosphate shunt (ortholog); pentose-phosphate shunt, non-oxidative branch (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - non-oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955424 107297 135577 - 102011019 AGCD01024165;AGCD01024166;GBDF01160051;XM_005385377 XP_005385434 MODEL 8721618 protein-coding Rce1 Ras converting CAAX endopeptidase 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); exopeptidase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); CAAX-box protein processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955422 18538251 18541322 - 102004171 AGCD01022951;GBCQ01101305;XM_005384377;XM_013513907;XM_013513908 XP_005384434;XP_013369361;XP_013369362 MODEL 9041982 protein-coding LOC102019876 vomeronasal type-1 receptor 2-like NW_004955604 576131 577033 - 102019876 AGCD01076925;XM_005414875 XP_005414932 MODEL 9017616 protein-coding Rhbdd1 rhomboid domain containing 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN cellular response to unfolded protein (ortholog); cellular response to UV (ortholog); ERAD pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) NW_004955453 7527090 7656689 - 102010767 AGCD01044747;AGCD01044748;AGCD01044749;GBDJ01117091;XM_005395453;XM_005395455;XM_005395456;XM_005395457;XM_005395458;XM_005395459;XM_005395460 XP_005395510;XP_005395512;XP_005395513;XP_005395514;XP_005395515;XP_005395516;XP_005395517 MODEL 8740113 protein-coding Wdr44 WD repeat domain 44 ENCODES a protein that exhibits molecular sequestering activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cytosolic ciliogenesis (ortholog); negative regulation of cilium assembly (ortholog); regulation of cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); brachydactyly (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endosome membrane (ortholog); Golgi apparatus (ortholog); microtubule (ortholog) NW_004955534 1492990 1599402 - 102017913 AGCD01070498;AGCD01070499;AGCD01070500;AGCD01070501;AGCD01070502;AGCD01070503;GBCB01089438;XM_005410462 XP_005410519 MODEL 9031260 pseudo LOC102016375 39S ribosomal protein L20, mitochondrial-like NW_004955415 7808215 7808842 + 102016375 AGCD01016058 MODEL 730469085 snorna SNORA61 Small nucleolar RNA SNORA61 9010559 ncrna LOC102019538 uncharacterized LOC102019538 NW_004955441 8245514 8252301 - 102019538 AGCD01036978;GBDF01234852;XR_262058;XR_262059 MODEL 8882687 protein-coding Lonrf1 LON peptidase N-terminal domain and ring finger 1 ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lymphoma (ortholog) NW_004955463 4282609 4318716 + 102005236 AGCD01049603;AGCD01049604;GBBH01110840;XM_005398466 XP_005398523 MODEL 9018476 trna Trnal-aag transfer RNA leucine (anticodon AAG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955493;NW_004955465;NW_004955550;NW_004955550 931996;13766471;1486047;1410172 932077;13766552;1486128;1410253 +;-;-;+ 101978790 AGCD01050622;AGCD01060872;AGCD01072566;AGCD01072577 MODEL 730468954 snorna SNORA18 Small nucleolar RNA SNORA18 730469422 snorna SNORA40 Small nucleolar RNA SNORA40 39131304 protein-coding RS1 retinoschisin 1 8777776 protein-coding Rnf103 ring finger protein 103 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH depressive disorder (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955424 1097981 1161267 + 102016823 AGCD01024231;AGCD01024232;GBCB01042732;GBDF01189093;XM_005385393;XM_013514632 XP_005385450;XP_013370086 MODEL 8724654 protein-coding LOC102008964 zinc finger CCHC-type and RNA-binding motif-containing protein 1 NW_004955426 18643581 18647670 - 102008964 AGCD01026526;AGCD01026527;GBCC01039405;XM_005386263 XP_005386320 MODEL 8790161 ncrna LOC102022416 uncharacterized LOC102022416 NW_004955431 15481204 15487817 + 102022416 AGCD01030361;GBDI01229445;XR_261478 MODEL 8910465 protein-coding LOC102010912 claudin-34-like NW_004955493 6423748 6424605 - 102010912 AGCD01061103;GBDF01011330;GBDK01381044;XM_005405150 XP_005405207 MODEL 8926012 protein-coding LOC102004142 uncharacterized LOC102004142 NW_004955456 913644 917256 + 102004142 AGCD01046223;GBDF01177210;XM_005396878 XP_005396935 MODEL 8762248 protein-coding Phf24 PHD finger protein 24 INVOLVED IN detection of mechanical stimulus involved in sensory perception of pain (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); sarcoma (ortholog); FOUND IN glutamatergic synapse (ortholog); synaptic vesicle membrane (ortholog) NW_004955472 1186021 1204018 - 102017226 AGCD01053379;GBDF01285827;XM_005401035;XM_013523027 XP_005401092;XP_013378481 MODEL 8777895 protein-coding Pitx2 paired like homeodomain 2 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); animal organ morphogenesis (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); ASSOCIATED WITH anterior segment dysgenesis (ortholog); anterior segment dysgenesis 1 (ortholog); anterior segment dysgenesis 4 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955457 15803493 15823193 + 102022050 AGCD01047099;GBCB01023937;XM_005397106;XM_005397107 XP_005397163;XP_005397164 MODEL 9007994 protein-coding Srpk2 SRSF protein kinase 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN angiogenesis (ortholog); intracellular signal transduction (ortholog); negative regulation of viral genome replication (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955410 9807936 10034760 - 102020224 AGCD01010776;AGCD01010777;AGCD01010778;AGCD01010779;AGCD01010780;AGCD01010781;AGCD01010782;AGCD01010783;GBDF01187645;XM_005377241;XM_005377243;XM_013510522;XM_013510524;XM_013510525;XM_013510526 XP_005377298;XP_005377300;XP_013365976;XP_013365978;XP_013365979;XP_013365980 MODEL 8777635 pseudo LOC102011308 protein slowmo homolog 2 pseudogene NW_004955415 30282254 30283847 + 102011308 AGCD01016660 MODEL 8859207 protein-coding Ptpn2 protein tyrosine phosphatase non-receptor type 2 ENCODES a protein that exhibits integrin binding (ortholog); non-membrane spanning protein tyrosine phosphatase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN B cell differentiation (ortholog); erythrocyte differentiation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); Crohn's disease (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955402 771410 846671 + 102008478 AGCD01000033;AGCD01000034;GBCE01096711;XM_005372550;XM_013513054;XM_013513107;XM_013513139;XM_013513163;XM_013513183;XM_013513207;XM_013513238;XM_013513272;XM_013513296;XM_013513319;XM_013513343 XP_005372607;XP_013368508;XP_013368561;XP_013368593;XP_013368617;XP_013368637;XP_013368661;XP_013368692;XP_013368726;XP_013368750;XP_013368773;XP_013368797 MODEL 8703493 protein-coding Eps15l1 epidermal growth factor receptor pathway substrate 15 like 1 INVOLVED IN synaptic vesicle endocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN clathrin coat of coated pit (ortholog); presynapse (ortholog) NW_004955524 1264035 1309394 + 102029784 AGCD01068741;AGCD01068742;GBCE01030448;XM_013507228;XM_013507229;XM_013507230;XM_013507231 XP_013362682;XP_013362683;XP_013362684;XP_013362685 MODEL 39133557 snrna U2 U2 spliceosomal RNA 8767658 pseudo LOC102007434 eukaryotic translation initiation factor 1 pseudogene NW_004955419 15211183 15211577 - 102007434 AGCD01020066 MODEL 8980668 pseudo LOC102006293 protein kinase C iota type pseudogene NW_004955443 17422253 17426023 + 102006293 AGCD01038579 MODEL 8765317 protein-coding Polr1b RNA polymerase I subunit B ENCODES a protein that exhibits 5'-3' RNA polymerase activity (ortholog); DNA-directed RNA polymerase activity (ortholog); DNA/RNA hybrid binding (ortholog); INVOLVED IN embryo implantation (ortholog); nucleologenesis (ortholog); rRNA transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); fibrillar center (ortholog); nucleolus (ortholog) NW_004955470 1714156 1737749 - 102026311 AGCD01052653;AGCD01052654;GBDI01296356;XM_005400601;XM_005400604 XP_005400658;XP_005400661 MODEL 151707882 snorna SNORD65 Small nucleolar RNA SNORD65 9017246 ncrna LOC102019539 uncharacterized LOC102019539 NW_004955442 5261971 5277187 - 102019539 AGCD01037555;GBDF01056125;XR_262115 MODEL 626189139 snorna SNORD111 Small nucleolar RNA SNORD111 8790989 trna Trnal-caa transfer RNA leucine (anticodon CAA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955465;NW_004955418;NW_004955465;NW_004955465 13283889;29926451;13908819;13888432 13283993;29926556;13908923;13888537 -;+;+;- 101978789 AGCD01019491;AGCD01050597;AGCD01050633;AGCD01050634 MODEL 8874040 protein-coding Psat1 phosphoserine aminotransferase 1 ENCODES a protein that exhibits identical protein binding (ortholog); O-phospho-L-serine:2-oxoglutarate transaminase activity (ortholog); INVOLVED IN L-serine biosynthetic process (ortholog); negative regulation of ferroptosis (ortholog); response to mechanical stimulus (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH Animal Disease Models (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog) NW_004955512 1132452 1155405 - 102024490 AGCD01066633;AGCD01066634;GBDI01292993;XM_005408295 XP_005408352 MODEL 8785612 protein-coding Wdr45 WD repeat domain 45 ENCODES a protein that exhibits phosphatidylinositol phosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); protein kinase binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Arachnodactyly (ortholog); astigmatism (ortholog); FOUND IN cytoplasm (ortholog); phagophore assembly site (ortholog) NW_004955543 597796 604163 - 102006712 AGCD01071593;GBDI01078234;XM_005411316;XM_005411317;XM_005411319;XM_013508149 XP_005411373;XP_005411374;XP_005411376;XP_013363603 MODEL 8833974 pseudo LOC102018329 plakophilin-4 pseudogene NW_004955537 2756117 2758521 - 102018329 AGCD01070938 MODEL 8858527 pseudo LOC102008208 spermine synthase pseudogene NW_004955412 21750895 21751995 - 102008208 AGCD01013025 MODEL 8740017 pseudo LOC102011763 40S ribosomal protein S24 pseudogene NW_004955478 9920867 9921511 - 102011763 AGCD01056109 MODEL 8717837 ncrna LOC102010136 uncharacterized LOC102010136 NW_004955411 9963098 9981570 - 102010136 AGCD01011768;GBDF01305717;XR_259928 MODEL 8732715 ncrna LOC102003115 uncharacterized LOC102003115 NW_004955470 2942258 2951897 + 102003115 AGCD01052684;AGCD01052685;AGCD01052686;GBDF01056049;XR_263459 MODEL 8962504 protein-coding Tjp2 tight junction protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); protein tyrosine kinase binding (ortholog); INVOLVED IN establishment of endothelial intestinal barrier (ortholog); homotypic cell-cell adhesion (ortholog); intestinal absorption (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autosomal dominant nonsyndromic deafness 51 (ortholog); FOUND IN bicellular tight junction (ortholog); cell junction (ortholog); cell surface (ortholog) NW_004955434 3781368 3923240 - 102005497 AGCD01032143;AGCD01032144;AGCD01032145;AGCD01032146;AGCD01032147;AGCD01032148;GBCE01075388;GBDJ01089898;XM_005388570;XM_013516340 XP_005388627;XP_013371794 MODEL 8900018 protein-coding Selenos selenoprotein S ENCODES a protein that exhibits antioxidant activity (ortholog); ATPase binding (ortholog); enzyme binding (ortholog); INVOLVED IN cell redox homeostasis (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal adenoma (ortholog); colorectal carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); Derlin-1 retrotranslocation complex (ortholog) NW_004955416 28152984 28162173 - 102010481 AGCD01017626;GBBH01033790;XM_013512671;XM_013512672 XP_013368125;XP_013368126 MODEL 8727323 protein-coding LOC102005943 myoD family inhibitor domain-containing protein-like NW_004955421 17734841 17752220 + 102005943 AGCD01022030;XM_005383926 XP_005383983 MODEL 9004368 protein-coding Ppp1r15a protein phosphatase 1 regulatory subunit 15A ENCODES a protein that exhibits eukaryotic initiation factor eIF2 binding (ortholog); molecular adaptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to antibiotic (ortholog); cellular response to calcium ion starvation (ortholog); cellular response to carbohydrate stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Acute-On-Chronic Liver Failure (ortholog); Amaurosis Fugax (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955559 1750227 1753607 - 102029674 AGCD01073666;GBCQ01101763;XM_005412927 XP_005412984 MODEL 8768922 protein-coding LOC102005588 olfactory receptor 51L1-like NW_004955414 21113707 21117034 - 102005588 AGCD01015407;XM_005380493 XP_005380550 MODEL 8988961 protein-coding Slc35g1 solute carrier family 35 member G1 ENCODES a protein that exhibits citrate transmembrane transporter activity (ortholog); INVOLVED IN calcium ion export across plasma membrane (ortholog); intestinal absorption (ortholog); regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); prostate cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955507 423354 428051 + 102004094 AGCD01065472;GBBH01041247;XM_013506161 XP_013361615 MODEL 8859400 protein-coding LOC102012132 keratin, type II cytoskeletal 72 NW_004955547 2991156 3005189 - 102012132 AGCD01072303;XM_005411950 XP_005412007 MODEL 8792751 protein-coding C1ql2 complement C1q like 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); postsynaptic density assembly (ortholog); regulation of synapse maturation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); extracellular region (ortholog); glutamatergic synapse (ortholog) NW_004955459 10569064 10571064 + 102024767 AGCD01048192;GBDK01160507;XM_013521053 XP_013376507 MODEL 8849840 protein-coding Prkcz protein kinase C zeta ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); insulin receptor substrate binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); cell migration (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN adenosine signaling pathway; angiotensin II signaling pathway; ceramide signaling pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); Cardiomegaly (ortholog); FOUND IN anchoring junction (ortholog); apical cortex (ortholog); apical plasma membrane (ortholog) NW_004955486 8947579 9021702 - 102009845 AGCD01059158;GBBH01064694;GBCE01055776;XM_005404177;XM_013504279 XP_005404234;XP_013359733 MODEL 8877982 ncrna LOC102013339 uncharacterized LOC102013339 NW_004955437 18137771 18139577 + 102013339 AGCD01034777;XR_261891 MODEL 9007412 protein-coding Sftpd surfactant protein D ENCODES a protein that exhibits galactomannan binding (ortholog); identical protein binding (ortholog); lipopolysaccharide binding (ortholog); INVOLVED IN defense response to virus (ortholog); innate immune response in mucosa (ortholog); lung alveolus development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; surfactant homeostasis pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); multivesicular body (ortholog) NW_004955510 213468 226096 + 102025710 AGCD01066142;GBDK01010352;XM_005407866;XM_005407867;XM_013506331 XP_005407923;XP_005407924;XP_013361785 MODEL 730469435 snorna SNORA40 Small nucleolar RNA SNORA40 8910985 protein-coding Plin1 perilipin 1 ENCODES a protein that exhibits phospholipid binding (ortholog); protein sequestering activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN cellular response to cold (ortholog); lipid catabolic process (ortholog); negative regulation of lipid catabolic process (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); diabetes mellitus (ortholog); familial partial lipodystrophy (ortholog); FOUND IN cell periphery (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955416 15538309 15549275 + 102026001 AGCD01017335;GBDI01016533;XM_013512551;XM_013512552 XP_013368005;XP_013368006 MODEL 8797716 protein-coding Lonrf3 LON peptidase N-terminal domain and ring finger 3 ASSOCIATED WITH colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); stomach cancer (ortholog) NW_004955534 979399 1016626 - 102014605 AGCD01070483;GBBH01086248;XM_005410453;XM_005410454;XM_005410455 XP_005410510;XP_005410511;XP_005410512 MODEL 8992061 protein-coding Sobp sine oculis binding protein homolog ENCODES a protein that exhibits SUMO polymer binding (ortholog); INVOLVED IN cochlea development (ortholog); cognition (ortholog); inner ear morphogenesis (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); cervical cancer (ortholog); Impaired intellectual development, anterior maxillary protrusion, and strabismus (ortholog); FOUND IN nucleus (ortholog) NW_004955411 32745029 32898570 + 102023568 AGCD01012336;AGCD01012337;AGCD01012338;AGCD01012339;GBCB01000312;XM_013510791 XP_013366245 MODEL 8922641 protein-coding Trappc13 trafficking protein particle complex subunit 13 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955446 3433675 3467539 - 102019448 AGCD01040017;AGCD01040018;GBDF01158421;XM_013518409;XM_013518410 XP_013373863;XP_013373864 MODEL 8738007 protein-coding LOC102008580 uncharacterized LOC102008580 NW_004955558 1650552 1710254 + 102008580 AGCD01073456;AGCD01073457;AGCD01073458;AGCD01073459;AGCD01073460;AGCD01073461;AGCD01073462;XM_013508849 XP_013364303 MODEL 9048459 ncrna LOC102004900 uncharacterized LOC102004900 NW_004955458 14888316 14977389 - 102004900 AGCD01047854;AGCD01047855;AGCD01047856;AGCD01047857;AGCD01047858;GBDJ01147231;XR_001236480;XR_001236481;XR_262999;XR_263000 MODEL 8789568 protein-coding Rpl10 ribosomal protein L10 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); translation regulator activity (ortholog); INVOLVED IN cytoplasmic translation (ortholog); embryonic brain development (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955580 903618 906439 + 102028809 AGCD01075629;GBCQ01009178;XM_013509688 XP_013365142 MODEL 10073890 ncrna LOC106147466 uncharacterized LOC106147466 NW_004955565 1741780 1752046 + 106147466 AGCD01074329;XR_001232389 MODEL 8715969 protein-coding LOC102004144 palladin-like NW_004955408 32788476 32810588 + 102004144 AGCD01008854;AGCD01008855;GBDF01234212;XM_005376593 XP_005376650 MODEL 8771927 ncrna LOC102019877 uncharacterized LOC102019877 NW_004955403 15987649 15998377 + 102019877 AGCD01002056;GBDF01075082;XR_259176 MODEL 8758984 protein-coding Rapgef4 Rap guanine nucleotide exchange factor 4 ENCODES a protein that exhibits cAMP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); calcium-ion regulated exocytosis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); Burns (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) NW_004955449 2172354 2453367 - 102011601 AGCD01041823;AGCD01041824;AGCD01041825;AGCD01041826;AGCD01041827;GBDK01319992;XM_005393202;XM_005393203;XM_005393204;XM_005393205;XM_005393208;XM_013518783;XM_013518784;XM_013518785 XP_005393259;XP_005393260;XP_005393261;XP_005393262;XP_005393265;XP_013374237;XP_013374238;XP_013374239 MODEL 730469204 snorna SNORA61 Small nucleolar RNA SNORA61 8738867 pseudo LOC102005947 protein FAM72A-like NW_004955497 509767 511648 - 102005947 AGCD01062421 MODEL 9012261 protein-coding Rnf11 ring finger protein 11 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); sarcoma (ortholog); stomach cancer (ortholog); FOUND IN ubiquitin ligase complex (ortholog) NW_004955464 7745835 7787347 - 102027827 AGCD01050068;AGCD01050069;GBDF01004434;XM_005398777 XP_005398834 MODEL 8954386 protein-coding Rsad1 radical S-adenosyl methionine domain containing 1 ENCODES a protein that exhibits heme binding (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); thymoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955451 11257105 11273884 - 102012269 AGCD01043343;AGCD01043344;AGCD01043345;GBDK01430782;XM_005394167;XM_005394168;XM_005394169 XP_005394224;XP_005394225;XP_005394226 MODEL 9016154 protein-coding Prkd1 protein kinase D1 ENCODES a protein that exhibits diacylglycerol-dependent serine/threonine kinase activity (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to angiotensin (ortholog); cellular response to endothelin (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Cardiac Fibrosis (ortholog); Cardiomegaly (ortholog); FOUND IN autophagosome membrane (ortholog); cell cortex (ortholog); cell-cell junction (ortholog) NW_004955409 30554095 30860588 + 102017202 AGCD01010303;AGCD01010304;AGCD01010305;AGCD01010306;GBDJ01386770;XM_013510389;XM_013510390 XP_013365843;XP_013365844 MODEL 9019222 trna Trnal-cag transfer RNA leucine (anticodon CAG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955433;NW_004955433;NW_004955462 363663;14941261;14940923;14719898 363745;14941343;14941005;14719980 -;-;+;+ 101978793 AGCD01031735;AGCD01049456;AGCD01057606 MODEL 8860081 protein-coding Rchy1 ring finger and CHY zinc finger domain containing 1 ENCODES a protein that exhibits p53 binding (ortholog); protein homodimerization activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); protein autoubiquitination (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Injuries (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955474 1463817 1475677 - 102009275 AGCD01054255;GBCB01021660;GBCE01097442;XM_013502758 XP_013358212 MODEL 8788622 protein-coding LOC102018332 uncharacterized LOC102018332 NW_004955437 7937031 7944587 - 102018332 AGCD01034476;GBCB01119722;XM_013516734 XP_013372188 MODEL 8911469 protein-coding Plin2 perilipin 2 INVOLVED IN cellular response to glucose starvation (ortholog); lipid droplet disassembly (ortholog); lipid storage (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); head and neck squamous cell carcinoma (ortholog); Hypertriglyceridemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955434 21573860 21580990 - 102018432 AGCD01032639;GBCB01119738;GBDJ01082348;XM_013516386 XP_013371840 MODEL 8878585 protein-coding Loricrin loricrin cornified envelope precursor protein ENCODES a protein that exhibits structural constituent of cytoskeleton (ortholog); structural constituent of skin epidermis (ortholog); INVOLVED IN keratinocyte differentiation (ortholog); ASSOCIATED WITH Skin Neoplasms (ortholog); squamous cell carcinoma (ortholog); Vohwinkel Syndrome, Variant Form (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955592 167139 169638 - 102007834 AGCD01076300;GBCC01001286;XM_005414606 XP_005414663 MODEL 9015513 protein-coding LOC102003117 olfactory receptor 51B6-like NW_004955414 21261870 21262817 + 102003117 AGCD01015411;XM_005380081 XP_005380138 MODEL 8744759 protein-coding Rhbdd2 rhomboid domain containing 2 ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); Mesothelioma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955456 14652995 14666155 + 102006543 AGCD01046647;AGCD01046648;GBDF01052883;XM_005396802 XP_005396859 MODEL 8778490 protein-coding Pitx3 paired like homeodomain 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to glial cell derived neurotrophic factor (ortholog); dopaminergic neuron differentiation (ortholog); lens development in camera-type eye (ortholog); ASSOCIATED WITH anterior segment dysgenesis (ortholog); anterior segment dysgenesis 1 (ortholog); Aphakia (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955485 8130244 8140292 + 102016057 AGCD01058690;AGCD01058691;GBCB01061028;GBDF01098688;XM_013504101 XP_013359555 MODEL 8763934 protein-coding Srpk3 SRSF protein kinase 3 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN muscle tissue development (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2J (ortholog); congenital myopathy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955580 496447 500709 + 102018243 AGCD01075607;GBCB01002736;XM_005414149;XM_005414150 XP_005414206;XP_005414207 MODEL 39133560 snrna U2 U2 spliceosomal RNA 8724348 protein-coding Selenot selenoprotein T ENCODES a protein that exhibits thioredoxin-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); cellular oxidant detoxification (ortholog); glucose homeostasis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955448 1794959 1814282 + 102025635 AGCD01041268;AGCD01041269;AGCD01041270;GBDF01082136;XM_013518685 XP_013374139 MODEL 730469264 snorna SNORA18 Small nucleolar RNA SNORA18 8806509 protein-coding Ptpn20 protein tyrosine phosphatase non-receptor type 20 FOUND IN centriolar satellite (ortholog) NW_004955556 1850933 1943318 + 102010842 AGCD01073204;AGCD01073205;AGCD01073206;GBBH01151275;XM_005412599;XM_005412600;XM_005412601;XM_005412602;XM_005412603;XM_005412604;XM_005412605;XM_005412606;XM_005412607;XM_005412608;XM_005412609;XM_013508810 XP_005412656;XP_005412657;XP_005412658;XP_005412659;XP_005412660;XP_005412661;XP_005412662;XP_005412663;XP_005412664;XP_005412665;XP_005412666;XP_013364264 MODEL 39133497 snrna U4 U4 spliceosomal RNA 8737995 pseudo LOC102007436 eukaryotic peptide chain release factor subunit 1 pseudogene NW_004955484 8653605 8660088 + 102007436 AGCD01058393 MODEL 8742749 protein-coding LOC102006296 zinc finger protein 709-like NW_004955569 1353747 1371972 - 102006296 AGCD01074650;AGCD01074651;GBCE01006118;XM_005413500 XP_005413557 MODEL 9003056 ncrna LOC102013341 uncharacterized LOC102013341 NW_004955438 12804313 12806768 + 102013341 AGCD01035273;GBDF01040134;XR_261928 MODEL 8863270 protein-coding Polr1c RNA polymerase I and III subunit C INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase III (ortholog); transcription elongation by RNA polymerase I (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955437 9346397 9350591 + 102011146 AGCD01034527;GBDJ01006305;XM_005389779 XP_005389836 MODEL 626189159 snorna SNORD111 Small nucleolar RNA SNORD111 8963835 protein-coding C1ql3 complement C1q like 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); postsynaptic density assembly (ortholog); regulation of synapse organization (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); sarcoma (ortholog); thymoma (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) NW_004955429 11287486 11296716 + 102030103 AGCD01028686;GBDJ01404596;XM_005386970 XP_005387027 MODEL 8724154 ncrna LOC102022417 uncharacterized LOC102022417 NW_004955432 705758 726019 - 102022417 AGCD01030574;GBCE01049655;XR_261497 MODEL 9016007 protein-coding Sfxn1 sideroflexin 1 ENCODES a protein that exhibits L-alanine transmembrane transporter activity (ortholog); L-serine transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); iron ion transport (ortholog); L-alanine transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955408 28054211 28105294 + 102006545 AGCD01008703;AGCD01008704;AGCD01008705;AGCD01008706;AGCD01008707;GBDK01358301;XM_005376362;XM_013509460 XP_005376419;XP_013364914 MODEL 8759747 pseudo LOC102010913 cationic trypsin-3-like NW_004955494 1211669 1216586 + 102010913 AGCD01061392 MODEL 8704062 pseudo LOC102019544 40S ribosomal protein S6 pseudogene NW_004955568 1456206 1472192 + 102019544 AGCD01074545 MODEL 8782991 protein-coding Psca prostate stem cell antigen ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH duodenal ulcer (ortholog); Helicobacter Infections (ortholog); linitis plastica (ortholog); FOUND IN plasma membrane (ortholog) NW_004955454 1425255 1429786 + 102019023 AGCD01044968;AGCD01044969;GBDK01168603;XM_005395732 XP_005395789 MODEL 8782041 ncrna LOC102008209 uncharacterized LOC102008209 NW_004955467 9932033 9948996 + 102008209 AGCD01051536;AGCD01051537;GBBH01110880;XR_001236856 MODEL 8802923 pseudo LOC102011311 methionine aminopeptidase 2 pseudogene NW_004955416 12398435 12418557 - 102011311 AGCD01017205;AGCD01017206 MODEL 8813485 ncrna LOC102011766 uncharacterized LOC102011766 NW_004955480 7767280 7832733 - 102011766 AGCD01056709;GBDI01142229;XR_001230909;XR_263746 MODEL 8799856 pseudo LOC102008582 adiponectin receptor protein 1 pseudogene NW_004955446 6108606 6109553 - 102008582 AGCD01040087 MODEL 8732465 protein-coding Phf3 PHD finger protein 3 ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955502 195332 271749 - 102021992 AGCD01064232;GBCQ01101060;GBDF01122588;XM_013505825;XM_013505826 XP_013361279;XP_013361280 MODEL 15036851 trna Trnal-gag transfer RNA leucine (anticodon GAG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978791 8721704 ncrna LOC102005589 uncharacterized LOC102005589 NW_004955415 23433810 23434272 + 102005589 AGCD01016554;GBDF01207363;XR_260313 MODEL 9010642 protein-coding Ppp1r15b protein phosphatase 1 regulatory subunit 15B ENCODES a protein that exhibits eukaryotic initiation factor eIF2 binding (ortholog); molecular adaptor activity (ortholog); protein phosphatase 1 binding (ortholog); INVOLVED IN ER overload response (ortholog); response to endoplasmic reticulum stress (ortholog); response to hydrogen peroxide (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN protein phosphatase type 1 complex (ortholog) NW_004955406 40232516 40238711 - 102024874 AGCD01006658;GBDF01119554;XM_013522788 XP_013378242 MODEL 9057405 protein-coding Spen spen family transcriptional repressor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription repressor complex (ortholog) NW_004955527 2279438 2343263 - 102020046 AGCD01069427;AGCD01069428;AGCD01069429;AGCD01069430;AGCD01069431;GBCB01056802;GBCQ01068573;XM_013507394 XP_013362848 MODEL 730469284 snorna SNORD66 Small nucleolar RNA SNORD66 730469451 snorna SNORA40 Small nucleolar RNA SNORA40 8791816 ncrna LOC102010145 uncharacterized LOC102010145 NW_004955414 6341018 6344268 - 102010145 AGCD01014918;GBDK01371346;XR_001233178;XR_260156 MODEL 8833527 protein-coding Eps8 EGFR pathway substrate 8, signaling adaptor ENCODES a protein that exhibits actin binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 102 (ortholog); autosomal recessive nonsyndromic deafness 106 (ortholog); FOUND IN brush border (ortholog); cell cortex (ortholog); glutamatergic synapse (ortholog) NW_004955413 12267701 12386088 - 102005356 AGCD01013986;AGCD01013987;AGCD01013988;GBDI01290198;XM_005379018;XM_005379019;XM_005379020 XP_005379075;XP_005379076;XP_005379077 MODEL 8771674 protein-coding LOC102004902 uncharacterized LOC102004902 NW_004955458 6755891 6789102 + 102004902 AGCD01047568;GBDI01288371;XM_005397527 XP_005397584 MODEL 8905145 pseudo LOC102016377 fatty acyl-CoA reductase 1 pseudogene NW_004955475 612776 613779 + 102016377 AGCD01054701 MODEL 8914831 protein-coding Sfxn2 sideroflexin 2 INVOLVED IN mitochondrial transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955485 7716916 7732122 - 102012098 AGCD01058672;GBCE01065073;XM_005403827;XM_005403828;XM_013504027;XM_013504028;XM_013504029;XM_013504030;XM_013504031;XM_013504033;XM_013504034;XM_013504035;XM_013504036;XR_001231068 XP_005403884;XP_005403885;XP_013359481;XP_013359482;XP_013359483;XP_013359484;XP_013359485;XP_013359487;XP_013359488;XP_013359489;XP_013359490 MODEL 8779085 protein-coding Lox lysyl oxidase ENCODES a protein that exhibits collagen binding (ortholog); copper ion binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN aorta development (ortholog); ascending aorta development (ortholog); blood vessel development (ortholog); PARTICIPATES IN hypertension pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); aortic aneurysm (ortholog); aortic valve insufficiency (ortholog); FOUND IN collagen trimer (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955521 178290 193926 - 102005958 AGCD01068130;GBCE01000865;GBDK01279501;XM_005409287;XM_013507090 XP_005409344;XP_013362544 MODEL 9032520 pseudo LOC102018336 40S ribosomal protein SA pseudogene NW_004955440 15872537 15873432 + 102018336 AGCD01036502 MODEL 8749852 protein-coding Slc35g2 solute carrier family 35 member G2 ASSOCIATED WITH melanoma (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog); synaptic vesicle membrane (ortholog) NW_004955501 1974126 1998547 - 102017794 AGCD01064065;AGCD01064066;AGCD01064067;GBCQ01014308;XM_005406778 XP_005406835 MODEL 8781163 protein-coding LOC102003118 olfactory receptor 2AG1-like NW_004955414 22492961 22493908 - 102003118 AGCD01015459;XM_005380176 XP_005380233 MODEL 8727359 protein-coding Rapgef5 Rap guanine nucleotide exchange factor 5 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955410 24525748 24716151 - 102007634 AGCD01011131;AGCD01011132;AGCD01011133;AGCD01011134;GBBH01203298;XM_005377379 XP_005377436 MODEL 8786859 protein-coding Plin3 perilipin 3 ENCODES a protein that exhibits diacylglycerol binding (ortholog); phospholipid binding (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); lipid droplet disassembly (ortholog); lipid storage (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endosome membrane (ortholog); lipid droplet (ortholog) NW_004955495 4177701 4190052 + 102003035 AGCD01061900;AGCD01061901;GBDF01047898;XM_005405777;XM_013505193;XM_013505194 XP_005405834;XP_013360647;XP_013360648 MODEL 8771338 pseudo LOC102005948 coiled-coil domain-containing protein 152-like NW_004955424 19596277 19597238 - 102005948 AGCD01024830 MODEL 39133498 snrna U4 U4 spliceosomal RNA 8969247 protein-coding Wdr45b WD repeat domain 45B ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); TSC1-TSC2 complex binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); lysosome (ortholog); phagophore assembly site (ortholog) NW_004955506 515364 556507 + 102006797 AGCD01065230;AGCD01065231;AGCD01065232;GBDF01081047;XM_005407188 XP_005407245 MODEL 730469241 snorna SNORA18 Small nucleolar RNA SNORA18 8951490 protein-coding Rnf111 ring finger protein 111 ENCODES a protein that exhibits SMAD binding (ortholog); SUMO polymer binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN pattern specification process (ortholog); positive regulation of protein ubiquitination (ortholog); positive regulation of transforming growth factor beta receptor signaling pathway (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955450 15590053 15651344 - 102014101 AGCD01042797;AGCD01042798;AGCD01042799;AGCD01042800;GBDJ01272159;XM_005393835;XM_013518871;XM_013518872;XM_013518873 XP_005393892;XP_013374325;XP_013374326;XP_013374327 MODEL 8885269 protein-coding Socs1 suppressor of cytokine signaling 1 ENCODES a protein that exhibits insulin-like growth factor receptor binding (ortholog); kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN insulin signaling pathway; interleukin-12 signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH Abdominal Pain (ortholog); acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955442 7321337 7323109 + 102030005 AGCD01037623;GBCE01077934;XM_005391166 XP_005391223 MODEL 8982899 protein-coding Tjp3 tight junction protein 3 INVOLVED IN regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cell junction (ortholog) NW_004955495 5620817 5647211 + 102007672 AGCD01062015;AGCD01062016;AGCD01062017;GBBH01087934;XM_005405882;XM_005405883;XM_013505215 XP_005405939;XP_005405940;XP_013360669 MODEL 8788209 protein-coding Prkd2 protein kinase D2 ENCODES a protein that exhibits protein kinase activity (ortholog); protein kinase C binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cellular response to vascular endothelial growth factor stimulus (ortholog); intracellular signal transduction (ortholog); positive regulation of angiogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955574 723933 750794 - 102029242 AGCD01075126;GBBH01116301;XM_005413839;XM_005413841;XM_013509567;XM_013509568 XP_005413896;XP_005413898;XP_013365021;XP_013365022 MODEL 9002062 protein-coding Rpl10a ribosomal protein L10a ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); response to ethanol (ortholog); translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955437 3383265 3386064 + 102027110 AGCD01034310;GBDF01015246;XM_005389557 XP_005389614 MODEL 8955739 ncrna LOC102010918 uncharacterized LOC102010918 NW_004955496 4040916 4059796 - 102010918 AGCD01062307;AGCD01062308;GBDF01279073;XR_264175 MODEL 8922785 ncrna LOC102008965 uncharacterized LOC102008965 NW_004955508 2550384 2643799 + 102008965 AGCD01065788;AGCD01065789;AGCD01065790;AGCD01065791;GBDF01249960;XR_264386 MODEL 8724541 protein-coding LOC102004145 cryptic protein-like NW_004955459 153874 177414 + 102004145 AGCD01047925;AGCD01047926;GBDF01016700;XM_013521086;XM_013521087;XM_013521088;XM_013521089 XP_013376540;XP_013376541;XP_013376542;XP_013376543 MODEL 10120733 ncrna LOC106147467 uncharacterized LOC106147467 NW_004955565 1364399 1366888 + 106147467 AGCD01074315;GBDI01212007;XR_001232390 MODEL 8957492 pseudo LOC102019878 serine/threonine/tyrosine-interacting protein pseudogene NW_004955623 1038 1776 - 102019878 AGCD01077398 MODEL 8889065 protein-coding Psd pleckstrin and Sec7 domain containing ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN maintenance of postsynaptic density structure (ortholog); neuron differentiation (ortholog); neuron projection development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cleavage furrow (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955485 7979654 7994662 + 102017457 AGCD01058685;AGCD01058686;GBDJ01009628;XM_005403841;XM_005403842;XM_005403843;XM_013504081 XP_005403898;XP_005403899;XP_005403900;XP_013359535 MODEL 39132051 snorna SNORA62 Small nucleolar RNA SNORA62/SNORA6 family 8960084 ncrna LOC102016381 uncharacterized LOC102016381 NW_004955479 5274664 5282636 - 102016381 AGCD01056342;XR_263735 MODEL 39133563 snrna U2 U2 spliceosomal RNA 8997621 protein-coding Piwil1 piwi like RNA-mediated gene silencing 1 ENCODES a protein that exhibits mRNA binding (ortholog); mRNA cap binding complex binding (ortholog); piRNA binding (ortholog); INVOLVED IN piRNA-mediated gene silencing by mRNA destabilization (ortholog); primary piRNA processing (ortholog); sperm DNA condensation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); high grade glioma (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); dense body (ortholog) NW_004955482 1435925 1451067 - 102024230 AGCD01057214;GBDF01008267;XM_013503748 XP_013359202 MODEL 8811883 ncrna LOC102005590 uncharacterized LOC102005590 NW_004955479 2051181 2061238 - 102005590 AGCD01056261;GBDF01038985;XR_001230885;XR_001230886 MODEL 8804462 protein-coding Selenov selenoprotein V ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955468 60744 66688 - 102020320 AGCD01051679;AGCD01051680;GBDF01000131;XM_013522269;XM_013522270;XM_013522271;XM_013522272;XR_001236868 XP_013377723;XP_013377724;XP_013377725;XP_013377726 MODEL 8746012 protein-coding Srpra SRP receptor subunit alpha ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN membrane (ortholog); signal recognition particle receptor complex (ortholog) NW_004955412 27287359 27293362 - 102003852 AGCD01013233;GBDF01049869;XM_005378499 XP_005378556 MODEL 8994890 ncrna LOC102007447 uncharacterized LOC102007447 NW_004955496 3205929 3212240 - 102007447 AGCD01062284;GBCQ01088384;XR_264174 MODEL 8817913 pseudo LOC102006298 heat shock factor-binding protein 1 pseudogene NW_004955582 64495 67098 - 102006298 AGCD01075739;AGCD01075740 MODEL 730469013 snorna SNORD113 Small nucleolar RNA SNORD113/SNORD114 family 8786929 protein-coding Ptpn21 protein tyrosine phosphatase non-receptor type 21 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955438 11087906 11162592 - 102006283 AGCD01035224;AGCD01035225;AGCD01035226;AGCD01035227;GBDJ01312275;XM_005390257;XM_013517163;XM_013517164;XM_013517165;XM_013517166 XP_005390314;XP_013372617;XP_013372618;XP_013372619;XP_013372620 MODEL 8962066 protein-coding Polr1d RNA polymerase I and III subunit D INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase III (ortholog); transcription elongation by RNA polymerase I (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleus (ortholog); RNA polymerase I complex (ortholog); RNA polymerase III complex (ortholog) NW_004955497 7029556 7030128 + 102015417 AGCD01062655;GBCE01074470;GBDK01141758;XM_005406376 XP_005406433 MODEL 8890896 protein-coding LOC102022422 trace amine-associated receptor 8b-like NW_004955436 13126382 13132776 - 102022422 AGCD01033854;XM_013516594 XP_013372048 MODEL 8778396 protein-coding Rsad2 radical S-adenosyl methionine domain containing 2 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); INVOLVED IN CD4-positive, alpha-beta T cell activation (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); defense response to virus (ortholog); ASSOCIATED WITH respiratory syncytial virus infectious disease; acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955487 1988226 2001731 - 102013727 AGCD01059256;GBDK01397678;XM_005404363 XP_005404420 MODEL 9010718 protein-coding C1qtnf1 C1q and TNF related 1 ENCODES a protein that exhibits collagen binding (ortholog); identical protein binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN negative regulation of platelet activation (ortholog); negative regulation of platelet aggregation (ortholog); positive regulation of aldosterone secretion (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955506 3680352 3700729 - 102026658 AGCD01065318;AGCD01065319;GBBH01050432;XM_005407346;XM_005407347;XM_013506098 XP_005407403;XP_005407404;XP_013361552 MODEL 8881247 protein-coding LOC102010146 uncharacterized LOC102010146 NW_004955471 567077 785143 + 102010146 AGCD01052962;AGCD01052963;AGCD01052964;AGCD01052965;XM_013522863 XP_013378317 MODEL 8766864 pseudo LOC102008213 RWD domain-containing protein 1 pseudogene NW_004955472 2276716 2278452 - 102008213 AGCD01053451 MODEL 8777636 protein-coding LOC102012139 gonadotropin-releasing hormone receptor NW_004955447 5179231 5190335 + 102012139 AGCD01040748;XM_005392835;XM_005392836 XP_005392892;XP_005392893 MODEL 8716690 protein-coding LOC102011313 uncharacterized LOC102011313 NW_004955417 26374063 26401589 - 102011313 AGCD01018507;AGCD01018508;AGCD01018509;GBBH01003039;XM_005381923;XM_013512715;XM_013512716;XM_013512717;XM_013512718;XM_013512719;XM_013512720;XM_013512721;XM_013512722;XM_013512723;XM_013512724;XM_013512725;XM_013512726;XM_013512727;XM_013512728;XM_013512729;XM_013512730;XM_013512731;XM_013512732;XM_013512734;XR_001233417;XR_001233418 XP_005381980;XP_013368169;XP_013368170;XP_013368171;XP_013368172;XP_013368173;XP_013368174;XP_013368175;XP_013368176;XP_013368177;XP_013368178;XP_013368179;XP_013368180;XP_013368181;XP_013368182;XP_013368183;XP_013368184;XP_013368185;XP_013368186;XP_013368188 MODEL 8778956 trna Trnal-uaa transfer RNA leucine (anticodon UAA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955465;NW_004955436;NW_004955465 13142581;16282643;13312190 13142663;16282725;13312272 -;-;- 101978788 AGCD01033911;AGCD01050590;AGCD01050597 MODEL 8728075 protein-coding Rhbdd3 rhomboid domain containing 3 INVOLVED IN liver development (ortholog); MAPK cascade (ortholog); negative regulation of natural killer cell activation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog) NW_004955455 3564867 3570910 - 102003730 AGCD01045636;GBDF01047829;XM_005396194;XM_005396195;XM_005396196 XP_005396251;XP_005396252;XP_005396253 MODEL 8728334 ncrna LOC102010919 uncharacterized LOC102010919 NW_004955424 15047979 15112987 + 102010919 AGCD01024683;AGCD01024684;AGCD01024685;AGCD01024686;AGCD01024687;AGCD01024688;AGCD01024689;GBBH01137283;XR_001234214;XR_001234215;XR_001234216;XR_001234217;XR_001234218;XR_001234219;XR_001234220;XR_001234221;XR_001234222;XR_001234223 MODEL 9055045 ncrna LOC102013342 uncharacterized LOC102013342 NW_004955440 5501646 5568701 - 102013342 AGCD01036274;AGCD01036275;AGCD01036276;GBCE01049183;XR_001235281;XR_001235282;XR_001235283 MODEL 39133772 snorna SNORD67 Small nucleolar RNA SNORD67 8708389 protein-coding Slc35g6 solute carrier family 35 member G6 NW_004955467 9447756 9450653 - 102012080 AGCD01051511;GBDF01001619;XM_013522195 XP_013377649 MODEL 9065738 protein-coding Spesp1 sperm equatorial segment protein 1 INVOLVED IN acrosome reaction (ortholog); fertilization (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955450 7355144 7370413 - 102018245 AGCD01042536;GBDF01006111;XM_005393668;XM_005393669 XP_005393725;XP_005393726 MODEL 9009025 protein-coding Rapgef6 Rap guanine nucleotide exchange factor 6 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN establishment of endothelial intestinal barrier (ortholog); positive regulation of microvillus assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); endocytic vesicle (ortholog) NW_004955408 2902530 3109273 - 102021314 AGCD01008041;AGCD01008042;AGCD01008043;AGCD01008044;AGCD01008045;AGCD01008046;AGCD01008047;GBCE01055755;XM_005376072 XP_005376129 MODEL 730469486 snorna SNORA40 Small nucleolar RNA SNORA40 8729488 protein-coding Psd2 pleckstrin and Sec7 domain containing 2 ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); pre-malignant neoplasm (ortholog); FOUND IN cleavage furrow (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955418 793960 848550 - 102011768 AGCD01018691;GBDF01281245;XM_005382051;XM_013512924;XM_013512925;XM_013512926;XM_013512927;XM_013512928 XP_005382108;XP_013368378;XP_013368379;XP_013368380;XP_013368381;XP_013368382 MODEL 8736082 protein-coding Rcl1 RNA terminal phosphate cyclase like 1 INVOLVED IN endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955434 9073643 9137387 + 102028569 AGCD01032288;AGCD01032289;AGCD01032290;AGCD01032291;GBBH01052005;XM_005388652 XP_005388709 MODEL 8770172 protein-coding Wdr46 WD repeat domain 46 INVOLVED IN ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Disease Progression (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955437 1840875 1848258 - 102030345 AGCD01034239;GBDF01087150;XM_013516886 XP_013372340 MODEL 8835734 protein-coding LOC102019545 death-inducer obliterator 1-like NW_004955445 36374 39104 - 102019545 AGCD01039300;GBCE01129387;XM_013518234 XP_013373688 MODEL 8927919 protein-coding Eps8l1 EPS8 signaling adaptor L1 ENCODES a protein that exhibits actin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); T cell receptor binding (ortholog); INVOLVED IN positive regulation of ruffle assembly (ortholog); regulation of Rho protein signal transduction (ortholog); Rho protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog); ruffle membrane (ortholog) NW_004955567 1074714 1084259 - 102006837 AGCD01074458;AGCD01074459;GBCE01000821;XM_013509255;XM_013509256;XM_013509257;XM_013509258 XP_013364709;XP_013364710;XP_013364711;XP_013364712 MODEL 8860760 protein-coding LOC102011767 galectin-5-like NW_004955481 5476020 5485385 + 102011767 AGCD01056980;AGCD01056981;GBDF01261565;XM_005402778;XM_005402779 XP_005402835;XP_005402836 MODEL 8717092 protein-coding Prkd3 protein kinase D3 ENCODES a protein that exhibits kinase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955441 5051079 5112791 - 102004976 AGCD01036867;AGCD01036868;AGCD01036869;GBBH01149583;GBDJ01031250;XM_005390869 XP_005390926 MODEL 8906125 protein-coding Rsbn1 round spermatid basic protein 1 ENCODES a protein that exhibits histone H4K20 demethylase activity (ortholog); INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN nucleus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955435 17028173 17081644 - 102029114 AGCD01033344;AGCD01033345;GBBH01201251;GBCQ01125658;XM_013516425;XM_013516427 XP_013371879;XP_013371881 MODEL 8919885 protein-coding Phf5a PHD finger protein 5A ENCODES a protein that exhibits RNA binding (ortholog); zinc ion binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of DNA-templated transcription (ortholog); stem cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nuclear matrix (ortholog); nuclear speck (ortholog); nucleolus (ortholog) NW_004955413 27018730 27026937 - 102019682 AGCD01014491;GBDI01060064;XM_005379353 XP_005379410 MODEL 8782053 protein-coding Ppp1r16a protein phosphatase 1 regulatory subunit 16A ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian cancer (ortholog); sarcoma (ortholog) NW_004955454 3097218 3127896 + 102009458 AGCD01045051;AGCD01045052;AGCD01045053;AGCD01045054;AGCD01045055;AGCD01045056;AGCD01045057;GBCB01035513;XM_005395898;XM_005395899;XM_005395900 XP_005395955;XP_005395956;XP_005395957 MODEL 8929087 protein-coding Loxhd1 lipoxygenase homology PLAT domains 1 INVOLVED IN sensory perception of sound (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 77 (ortholog); FOUND IN stereocilium (ortholog) NW_004955402 31985616 32144040 - 102030583 AGCD01000810;AGCD01000811;AGCD01000812;AGCD01000813;AGCD01000814;GBDF01270739;XM_005372874;XM_005372875 XP_005372931;XP_005372932 MODEL 10360979 ncrna LOC106147468 uncharacterized LOC106147468 NW_004955565 1442730 1448135 + 106147468 AGCD01074318;AGCD01074319;AGCD01074320;GBDJ01342078;XR_001232391 MODEL 10131559 protein-coding Plin4 perilipin 4 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Coffin-Siris syndrome 1 (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955495 4417672 4426945 + 106146790 AGCD01061922;GBDK01147195;XM_013505186;XM_013505187 XP_013360640;XP_013360641 MODEL 8784614 protein-coding LOC102022423 uncharacterized LOC102022423 NW_004955529 3940781 3982450 + 102022423 AGCD01069807;AGCD01069808;GBDJ01291530;XM_005410082 XP_005410139 MODEL 8933107 protein-coding LOC102005950 cytochrome P450 2C55 NW_004955507 1146694 1227783 + 102005950 AGCD01065516;AGCD01065517;AGCD01065518;AGCD01065519;AGCD01065520;AGCD01065521;AGCD01065522;AGCD01065523;AGCD01065524;AGCD01065525;AGCD01065526;GBDI01308871;XM_005407534;XM_013506231 XP_005407591;XP_013361685 MODEL 8922241 protein-coding Ptpn22 protein tyrosine phosphatase non-receptor type 22 ENCODES a protein that exhibits kinase binding (ortholog); phosphatase activity (ortholog); protein tyrosine kinase binding (ortholog); INVOLVED IN cellular response to muramyl dipeptide (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); negative regulation of autophagy (ortholog); ASSOCIATED WITH Addison's disease (ortholog); alopecia areata (ortholog); Anti-Neutrophil Cytoplasmic Antibody-Associated Vasculitis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); nucleus (ortholog) NW_004955435 17082762 17139067 - 102014165 AGCD01033345;GBDK01393931;XM_005388984 XP_005389041 MODEL 8805716 protein-coding Tk1 thymidine kinase 1 ENCODES a protein that exhibits identical protein binding (ortholog); thymidine kinase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN digestive tract development (ortholog); DNA synthesis involved in mitotic DNA replication (ortholog); fetal process involved in parturition (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; mitochondrial neurogastrointestinal encephalopathy syndrome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); breast cancer (ortholog) NW_004955506 4379830 4390729 + 102008876 AGCD01065337;GBDK01117779;XM_005407382;XM_005407383 XP_005407439;XP_005407440 MODEL 8757153 protein-coding Socs2 suppressor of cytokine signaling 2 ENCODES a protein that exhibits growth hormone receptor binding (ortholog); insulin-like growth factor receptor binding (ortholog); phosphorylation-dependent protein binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); growth hormone receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); Breast Neoplasms (ortholog); ductal carcinoma in situ (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog) NW_004955405 30349956 30623849 + 102026937 AGCD01005272;AGCD01005273;AGCD01005274;AGCD01005275;AGCD01005276;GBDI01171449;XM_005374469;XM_005374471;XM_005374472;XM_013518322;XM_013518324;XM_013518330;XM_013518331;XM_013518336;XM_013518338;XM_013518343;XM_013518347;XM_013518351;XM_013518360;XM_013518369;XM_013518373;XM_013518380;XR_001235628;XR_001235629 XP_005374526;XP_005374528;XP_005374529;XP_013373776;XP_013373778;XP_013373784;XP_013373785;XP_013373790;XP_013373792;XP_013373797;XP_013373801;XP_013373805;XP_013373814;XP_013373823;XP_013373827;XP_013373834 MODEL 8732023 ncrna LOC102004146 uncharacterized LOC102004146 NW_004955460 10717060 10718321 - 102004146 AGCD01048602;GBDI01208841;XR_263051 MODEL 8926611 protein-coding LOC102008966 olfactory receptor 1030-like NW_004955511 1700555 1701493 - 102008966 AGCD01066377;XM_005407972 XP_005408029 MODEL 8782463 protein-coding Sfxn3 sideroflexin 3 ENCODES a protein that exhibits L-serine transmembrane transporter activity (ortholog); INVOLVED IN mitochondrial transmembrane transport (ortholog); one-carbon metabolic process (ortholog); serine import into mitochondrion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955485 9157657 9165243 - 102028972 AGCD01058748;AGCD01058749;GBBH01035640;GBBH01035644;XM_005403880 XP_005403937 MODEL 8757275 pseudo LOC102003119 ATP-binding cassette sub-family G member 2 pseudogene NW_004955470 8863858 8865469 + 102003119 AGCD01052834 MODEL 8911275 protein-coding Trappc14 trafficking protein particle complex subunit 14 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN cilium assembly (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); midbody (ortholog) NW_004955573 644907 649363 + 102011708 AGCD01074995;AGCD01074996;GBCE01135187;XM_013509467 XP_013364921 MODEL 39132049 snorna SNORA62 Small nucleolar RNA SNORA62/SNORA6 family 39133566 snrna U2 U2 spliceosomal RNA 9034732 ncrna LOC102016383 uncharacterized LOC102016383 NW_004955481 10068625 10082092 - 102016383 AGCD01057135;GBDF01119571;XR_263807 MODEL 39133499 snrna U4 U4 spliceosomal RNA 9026903 protein-coding Selenow selenoprotein W INVOLVED IN erythrocyte differentiation (ortholog); response to lipopolysaccharide (ortholog); response to selenium ion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); epilepsy (ortholog) NW_004955574 1522304 1526862 + 102015064 AGCD01075186;GBCB01004024;XM_005415250;XR_001232449 XP_005415307 MODEL 8728120 ncrna LOC102007448 uncharacterized LOC102007448 NW_004955426 3095664 3103993 - 102007448 AGCD01026065;GBDI01311716;XR_261183 MODEL 9009387 protein-coding LOC102005594 olfactory receptor 1L6-like NW_004955419 5236631 5237566 - 102005594 AGCD01019793;XM_005382523 XP_005382580 MODEL 8846731 protein-coding Srprb SRP receptor subunit beta ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); membrane (ortholog) NW_004955501 4784266 4796587 - 102026890 AGCD01064145;GBDF01046594;XM_005406808 XP_005406865 MODEL 9013165 protein-coding Piwil2 piwi like RNA-mediated gene silencing 2 ENCODES a protein that exhibits mRNA binding (ortholog); piRNA binding (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN germ-line stem cell population maintenance (ortholog); negative regulation of circadian rhythm (ortholog); oogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); celiac disease (ortholog); cervical cancer (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); dense body (ortholog) NW_004955403 45737674 45819478 + 102005988 AGCD01002826;AGCD01002827;AGCD01002828;AGCD01002829;AGCD01002830;AGCD01002831;AGCD01002832;AGCD01002833;AGCD01002834;AGCD01002835;AGCD01002836;GBDK01179013;XM_005373656;XM_013513815 XP_005373713;XP_013369269 MODEL 9013323 ncrna LOC102010922 uncharacterized LOC102010922 NW_004955425 2114106 2208490 - 102010922 AGCD01025251;AGCD01025252;AGCD01025253;AGCD01025254;AGCD01025255;GBDF01075868;XR_001234279;XR_001234280;XR_001234281;XR_001234282;XR_001234283 MODEL 730469322 snorna SNORD113 Small nucleolar RNA SNORD113/SNORD114 family 9039500 protein-coding Ppp1r16b protein phosphatase 1 regulatory subunit 16B ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN establishment of endothelial barrier (ortholog); positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); positive regulation of endothelial cell proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955445 17864103 17961295 - 102008675 AGCD01039897;GBDI01295625;XM_005392527;XM_005392529 XP_005392584;XP_005392586 MODEL 8905729 protein-coding LOC102008583 olfactory receptor 2J3-like NW_004955576 1306942 1307865 + 102008583 AGCD01075370;XM_005413944 XP_005414001 MODEL 150537114 snorna SNORD69 Small nucleolar RNA SNORD69 8931053 protein-coding Polr1e RNA polymerase I subunit E ENCODES a protein that exhibits RNA polymerase I general transcription initiation factor binding (ortholog); INVOLVED IN nucleolar large rRNA transcription by RNA polymerase I (ortholog); RNA polymerase I preinitiation complex assembly (ortholog); transcription elongation by RNA polymerase I (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955419 28970982 28983862 - 102006779 AGCD01020481;GBDF01224045;XM_005382878 XP_005382935 MODEL 8877596 protein-coding Rnf112 ring finger protein 112 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN embryonic brain development (ortholog); G1 to G0 transition involved in cell differentiation (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); high grade glioma (ortholog); Mesothelioma (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); endosome (ortholog) NW_004955467 349703 355922 - 102028942 AGCD01051218;GBCQ01017224;XM_005399266 XP_005399323 MODEL 8794785 protein-coding Spg11 SPG11 vesicle trafficking associated, spatacsin ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN autophagosome organization (ortholog); axo-dendritic transport (ortholog); axon extension (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955416 11084448 11168478 - 102016589 AGCD01017174;AGCD01017175;AGCD01017176;AGCD01017177;AGCD01017178;GBCQ01152753;XM_005381419;XM_005381422;XM_013512469 XP_005381476;XP_005381479;XP_013367923 MODEL 8763806 protein-coding Slc36a2 solute carrier family 36 member 2 ENCODES a protein that exhibits amino acid:proton symporter activity (ortholog); gamma-aminobutyric acid:proton symporter activity (ortholog); glycine transmembrane transporter activity (ortholog); INVOLVED IN amino acid export across plasma membrane (ortholog); glycine transport (ortholog); L-alanine transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hyperglycinuria (ortholog); iminoglycinuria (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog); recycling endosome membrane (ortholog) NW_004955408 2363416 2392210 + 102015694 AGCD01008006;GBCB01006475;XM_005376052;XM_005376053;XM_005376054;XM_005376055 XP_005376109;XP_005376110;XP_005376111;XP_005376112 MODEL 8827187 protein-coding LOC102008214 putative olfactory receptor 52P1 NW_004955414 21691721 21692701 + 102008214 AGCD01015427;XM_005380500 XP_005380557 MODEL 9017534 protein-coding Rpl10l ribosomal protein L10 like ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); male meiosis I (ortholog); ribosomal large subunit assembly (ortholog); ASSOCIATED WITH Intellectual Developmental Disorder with Dysmorphic Facies and Ptosis (ortholog); prostate cancer (ortholog); spermatogenic failure 4 (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); nucleus (ortholog) NW_004955409 15612118 15613056 + 102005675 AGCD01009684;GBDF01049589;XM_005376851 XP_005376908 MODEL 8987133 protein-coding LOC102019879 microcephalin-like NW_004955861 1015 15323 + 102019879 AGCD01078513;AGCD01078514;GBCB01113291;GBDK01433180;XM_013510200 XP_013365654 MODEL 8800605 protein-coding LOC102011316 olfactory receptor 2T2-like NW_004955418 30170706 30175904 - 102011316 AGCD01019506;GBBH01082943;XM_005382368 XP_005382425 MODEL 8765011 pseudo LOC102011771 glucose-induced degradation protein 8 homolog pseudogene NW_004955419 29922246 29923728 - 102011771 AGCD01020515 MODEL 9012361 trna Trnal-uag transfer RNA leucine (anticodon UAG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955467;NW_004955550 8841723;1420231 8841804;1420312 +;+ 101978792 AGCD01051475;AGCD01072566 MODEL 8819579 protein-coding Rsbn1l round spermatid basic protein 1 like ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear speck (ortholog) NW_004955410 7453868 7528509 - 102010878 AGCD01010716;AGCD01010717;AGCD01010718;GBBH01186809;GBDF01262717;XM_005377211 XP_005377268 MODEL 730469220 snorna SNORA18 Small nucleolar RNA SNORA18 8968765 protein-coding Rhbdf1 rhomboid 5 homolog 1 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); chaperone-mediated protein complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) NW_004955442 17090962 17098068 + 102009327 AGCD01037937;GBDJ01079685;GBDJ01079692;XM_005391681 XP_005391738 MODEL 8707739 pseudo LOC102006300 60S ribosomal protein L30-like NW_004955402 43644927 43645275 + 102006300 AGCD01001075 MODEL 8716542 ncrna LOC102004903 uncharacterized LOC102004903 NW_004955409 9055420 9070182 + 102004903 AGCD01009428;AGCD01009429;AGCD01009430;GBDF01194507;XR_259760 MODEL 9001109 protein-coding Loxl1 lysyl oxidase like 1 ENCODES a protein that exhibits oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor (ortholog); protein-lysine 6-oxidase activity (ortholog); INVOLVED IN aorta development (ortholog); response to lipopolysaccharide (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); FOUND IN acrosomal vesicle (ortholog); basement membrane (ortholog); extracellular matrix (ortholog) NW_004955450 3715109 3734641 - 102022243 AGCD01042442;GBBH01119228;XM_005393588 XP_005393645 MODEL 8892160 protein-coding LOC102010149 olfactory receptor 52K2-like NW_004955414 21881188 21882150 - 102010149 AGCD01015436;XM_013511736 XP_013367190 MODEL 8769524 pseudo LOC102005595 26S proteasome non-ATPase regulatory subunit 8 pseudogene NW_004955419 11675117 11798906 - 102005595 AGCD01019960;AGCD01019961 MODEL 8819795 protein-coding Rapgefl1 Rap guanine nucleotide exchange factor like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); familial cold autoinflammatory syndrome 2 (ortholog) NW_004955451 14802094 14818096 + 102021076 AGCD01043573;AGCD01043574;AGCD01043575;GBDJ01262942;XM_013519122 XP_013374576 MODEL 8766518 protein-coding LOC102019548 olfactory receptor 2G3-like NW_004955581 848998 850370 + 102019548 AGCD01075698;XM_005414255 XP_005414312 MODEL 8907865 protein-coding Wdr47 WD repeat domain 47 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anterior commissure morphogenesis (ortholog); autophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); cell body (ortholog); cytoplasm (ortholog) NW_004955435 12414964 12479883 - 102022322 AGCD01033147;AGCD01033148;GBDI01324335;XM_005388841;XM_013516532;XM_013516533;XM_013516534;XM_013516535;XM_013516536 XP_005388898;XP_013371986;XP_013371987;XP_013371988;XP_013371989;XP_013371990 MODEL 8722851 ncrna LOC102018350 uncharacterized LOC102018350 NW_004955402 45846571 45854310 + 102018350 AGCD01001142;GBCQ01008628;XR_259093 MODEL 8847566 protein-coding Tk2 thymidine kinase 2 ENCODES a protein that exhibits deoxycytidine kinase activity (ortholog); thymidine kinase activity (ortholog); INVOLVED IN deoxycytidine metabolic process (ortholog); deoxyribonucleotide metabolic process (ortholog); mitochondrial DNA metabolic process (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 3 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955433 23075930 23106281 - 102019943 AGCD01031952;GBCB01120791;XM_005388462;XM_005388463;XM_005388466;XM_013516240;XM_013516241;XM_013516242 XP_005388519;XP_005388520;XP_005388523;XP_013371694;XP_013371695;XP_013371696 MODEL 8922743 protein-coding LOC102003121 zinc finger protein 93-like NW_004955474 95780 107152 + 102003121 AGCD01054200;AGCD01054201;GBCE01168727;XM_005401299;XM_013502775;XM_013502776 XP_005401356;XP_013358229;XP_013358230 MODEL 39133309 snorna SNORA62 Small nucleolar RNA SNORA62/SNORA6 family 39133500 snrna U4 U4 spliceosomal RNA 730469499 snorna SNORA40 Small nucleolar RNA SNORA40 8796731 protein-coding Rcn1 reticulocalbin 1 INVOLVED IN camera-type eye development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955476 10280669 10289668 + 102009714 AGCD01055419;GBCQ01007481;GBDK01131007;XM_005401900 XP_005401957 MODEL 8977867 protein-coding Psd3 pleckstrin and Sec7 domain containing 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cleavage furrow (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955403 42442708 42943314 - 102019347 AGCD01002752;AGCD01002753;AGCD01002754;AGCD01002755;AGCD01002756;AGCD01002757;AGCD01002758;AGCD01002759;AGCD01002760;AGCD01002761;AGCD01002762;AGCD01002763;GBDF01047483;XM_005373608;XM_005373613 XP_005373665;XP_005373670 MODEL 8799544 protein-coding Srpx sushi repeat containing protein X-linked INVOLVED IN autophagy (ortholog); negative regulation of cell proliferation involved in contact inhibition (ortholog); phagolysosome assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Dwarfism (ortholog); esophageal cancer (ortholog); FOUND IN autophagosome (ortholog); endoplasmic reticulum (ortholog) NW_004955601 286092 364235 - 102027254 AGCD01076751;AGCD01076752;AGCD01076753;AGCD01076754;GBCE01028505;XM_005414816;XM_005414817 XP_005414873;XP_005414874 MODEL 9059509 protein-coding LOC102022432 uncharacterized LOC102022432 NW_004955561 880407 969602 - 102022432 AGCD01073827;GBDF01000326;XM_013509074 XP_013364528 MODEL 8808177 protein-coding LOC102012140 olfactory receptor 2G3-like NW_004955576 1369561 1370502 - 102012140 AGCD01075374;XM_005413955 XP_005414012 MODEL 9067308 pseudo LOC102004151 olfactory receptor 150-like NW_004955412 24990393 24991336 + 102004151 AGCD01013133 MODEL 9060666 protein-coding Socs3 suppressor of cytokine signaling 3 ENCODES a protein that exhibits miRNA binding (ortholog); phosphotyrosine residue binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); branching involved in labyrinthine layer morphogenesis (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN erythropoietin signaling pathway; insulin signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atherosclerosis (ortholog); Burns (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog) NW_004955506 4222455 4225563 + 102007451 AGCD01065328;GBCE01031782;XM_005407378 XP_005407435 MODEL 8761234 protein-coding Rnf113a ring finger protein 113A ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); negative regulation of chemokine-mediated signaling pathway (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH nonphotosensitive trichothiodystrophy 5 (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955534 154242 155474 + 102007275 AGCD01070441;GBDK01355850;XM_005410428 XP_005410485 MODEL 8913683 protein-coding Phf6 PHD finger protein 6 ENCODES a protein that exhibits enzyme binding (ortholog); histone binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); Borjeson-Forssman-Lehmann syndrome (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955473 527005 586589 - 102024217 AGCD01053844;AGCD01053845;AGCD01053846;AGCD01053847;GBDK01432847;XM_005401199;XM_013523061 XP_005401256;XP_013378515 MODEL 8744987 protein-coding Slc36a3 solute carrier family 36 member 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955408 2395045 2423797 + 102016670 AGCD01008006;GBDF01155539;XM_005376056 XP_005376113 MODEL 8703620 protein-coding Plin5 perilipin 5 ENCODES a protein that exhibits identical protein binding (ortholog); lipase binding (ortholog); INVOLVED IN cell activation (ortholog); gene expression (ortholog); intracellular signaling cassette (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955495 4406590 4414783 + 102008639 AGCD01061922;GBCB01043643;XM_013505191;XM_013505192 XP_013360645;XP_013360646 MODEL 8872090 protein-coding LOC102008968 olfactory receptor-like protein OLF2 NW_004955511 826804 827742 + 102008968 AGCD01066344;XM_005408212 XP_005408269 MODEL 8710706 pseudo LOC102018352 PEST proteolytic signal-containing nuclear protein pseudogene NW_004955597 71046 72218 - 102018352 AGCD01076536;XR_265145 MODEL 8761709 protein-coding Sfxn5 sideroflexin 5 ENCODES a protein that exhibits citrate transmembrane transporter activity (ortholog); INVOLVED IN citrate transport (ortholog); positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955424 12545985 12659238 + 102020027 AGCD01024614;AGCD01024615;AGCD01024616;AGCD01024617;GBCE01013411;XM_005385576;XM_005385577;XM_005385578;XM_013514690 XP_005385633;XP_005385634;XP_005385635;XP_013370144 MODEL 9006013 trna Trnam-cau transfer RNA methionine (anticodon CAU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978797 AGCD01050592;AGCD01050595;AGCD01050596;AGCD01050607;AGCD01050636;AGCD01057602;AGCD01057629;AGCD01057630;AGCD01071784 MODEL 9049230 ncrna LOC102013345 uncharacterized LOC102013345 NW_004955442 8943995 9025234 - 102013345 AGCD01037655;AGCD01037656;AGCD01037657;AGCD01037658;AGCD01037659;AGCD01037660;GBDF01040016;XR_262126 MODEL 8789487 protein-coding Trappc2 trafficking protein particle complex subunit 2 ENCODES a protein that exhibits transcription corepressor binding (ortholog); transcription regulator inhibitor activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN positive regulation of gene expression (ortholog); skeletal system development (ortholog); ASSOCIATED WITH genetic disease (ortholog); osteochondrodysplasia (ortholog); spondyloepiphyseal dysplasia tarda (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955519 4470906 4485969 + 102024944 AGCD01067983;GBDK01393820;XM_005409200 XP_005409257 MODEL 10375207 ncrna LOC106147469 uncharacterized LOC106147469 NW_004955565 1607630 1615612 + 106147469 AGCD01074328;GBDI01193799;XR_001232392 MODEL 8730101 ncrna LOC102007453 uncharacterized LOC102007453 NW_004955510 4663031 4720789 - 102007453 AGCD01066268;AGCD01066269;AGCD01066270;GBDF01122818;XR_001231663;XR_001231664;XR_264408 MODEL 9028170 protein-coding Eps8l2 EPS8 signaling adaptor L2 ENCODES a protein that exhibits actin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN positive regulation of ruffle assembly (ortholog); regulation of Rho protein signal transduction (ortholog); Rho protein signal transduction (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 106 (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); protein-containing complex (ortholog) NW_004955476 11371928 11390588 - 102012192 AGCD01055454;AGCD01055455;AGCD01055456;GBBH01063738;GBDI01006668;XM_005401820 XP_005401877 MODEL 8929704 protein-coding Rhbdf2 rhomboid 5 homolog 2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN gene expression (ortholog); hair cell differentiation (ortholog); hair follicle cell proliferation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatoblastoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955506 5805415 5828286 + 102023826 AGCD01065390;GBDK01396584;XM_005407428 XP_005407485 MODEL 9055652 pseudo LOC102010929 transcriptional repressor protein YY1-like NW_004955429 4787838 4789119 - 102010929 AGCD01028496 MODEL 8737753 protein-coding Piwil4 piwi like RNA-mediated gene silencing 4 ENCODES a protein that exhibits molecular adaptor activity (ortholog); piRNA binding (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN epithelial structure maintenance (ortholog); piRNA processing (ortholog); piRNA-mediated gene silencing by mRNA destabilization (ortholog); ASSOCIATED WITH oligospermia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955605 331633 398528 - 102025862 AGCD01076941;AGCD01076942;AGCD01076943;AGCD01076944;GBCB01100222;GBCQ01059446;XM_013510100 XP_013365554 MODEL 8960099 protein-coding Loxl2 lysyl oxidase like 2 ENCODES a protein that exhibits calcium ion binding (ortholog); copper ion binding (ortholog); oligosaccharide binding (ortholog); INVOLVED IN collagen fibril organization (ortholog); endothelial cell migration (ortholog); endothelial cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN basement membrane (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955403 46503226 46583807 - 102017940 AGCD01002860;AGCD01002861;AGCD01002862;GBBH01137562;XM_005373698 XP_005373755 MODEL 8898264 protein-coding Ptpn23 protein tyrosine phosphatase non-receptor type 23 ENCODES a protein that exhibits protein kinase binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cilium assembly (ortholog); early endosome to late endosome transport (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955420 24869737 24897196 - 102014365 AGCD01021337;AGCD01021338;GBDF01119078;XM_005383401 XP_005383458 MODEL 8857967 protein-coding Prkdc protein kinase, DNA-activated, catalytic subunit ENCODES a protein that exhibits DNA-dependent protein kinase activity (ortholog); double-stranded DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); B cell lineage commitment (ortholog); brain development (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN chromatin (ortholog); DNA-dependent protein kinase complex (ortholog); DNA-dependent protein kinase-DNA ligase 4 complex (ortholog) NW_004955454 7733697 7890896 - 102021844 AGCD01045304;AGCD01045305;AGCD01045306;AGCD01045307;AGCD01045308;AGCD01045309;GBDJ01356019;XM_005396037;XM_013520201;XM_013520202 XP_005396094;XP_013375655;XP_013375656 MODEL 8782074 pseudo LOC102010150 high mobility group protein B1 pseudogene NW_004955415 3445227 3445862 + 102010150 AGCD01015938 MODEL 8740323 pseudo LOC102005596 TCDD-inducible poly [ADP-ribose] polymerase pseudogene NW_004955483 1094919 1097507 - 102005596 AGCD01057640 MODEL 8876868 protein-coding C1qtnf12 C1q and TNF related 12 ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN negative regulation of gluconeogenesis (ortholog); negative regulation of inflammatory response (ortholog); positive regulation of D-glucose import across plasma membrane (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955486 9541466 9545231 + 102028093 AGCD01059190;GBDF01279918;XM_005404246 XP_005404303 MODEL 8886162 protein-coding Spg21 SPG21 abhydrolase domain containing, maspardin ENCODES a protein that exhibits CD4 receptor binding (ortholog); INVOLVED IN collateral sprouting (ortholog); epidermal growth factor receptor signaling pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); trans-Golgi network transport vesicle (ortholog) NW_004955450 10424394 10455680 + 102012044 AGCD01042620;AGCD01042621;AGCD01042622;GBDF01127748;XM_005393738;XM_013518963 XP_005393795;XP_013374417 MODEL 8780146 protein-coding Rpl11 ribosomal protein L11 ENCODES a protein that exhibits 5S rRNA binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN p53 signaling pathway; ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH anemia (ortholog); Breast Cancer, Familial (ortholog); congenital hypoplastic anemia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955452 3626609 3630911 + 102017736 AGCD01043932;AY533222;GBDF01009586;NM_001282371 AAS59424;NP_001269300;Q6QMZ8 PROVISIONAL 8972871 protein-coding Polr1f RNA polymerase I subunit F INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); transcription elongation by RNA polymerase I (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH lung cancer (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); RNA polymerase I complex (ortholog) NW_004955410 22435136 22442839 - 102028505 AGCD01011074;GBCB01041940;XM_005377356 XP_005377413 MODEL 8989909 ncrna LOC102008215 uncharacterized LOC102008215 NW_004955415 2147670 2175932 + 102008215 AGCD01015895;AGCD01015896;AGCD01015897;AGCD01015898;GBDK01355203;XR_260259 MODEL 8946454 ncrna LOC102011319 uncharacterized LOC102011319 NW_004955484 8530719 8557626 + 102011319 AGCD01058391;AGCD01058392;AGCD01058393;GBDF01038957;XR_263894 MODEL 8909808 pseudo LOC102019881 RWD domain-containing protein 1-like NW_004955403 34871177 34904834 - 102019881 AGCD01002491 MODEL 39133568 snrna U2 U2 spliceosomal RNA 9004012 pseudo LOC102016385 60S ribosomal protein L30-like NW_004955419 3092044 3092797 + 102016385 AGCD01019704 MODEL 8713648 protein-coding Plk1 polo like kinase 1 ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); ATP binding (ortholog); identical protein binding (ortholog); INVOLVED IN astral microtubule organization (ortholog); centrosome cycle (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH breast carcinoma (ortholog); colorectal cancer (ortholog); COVID-19 (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955493 2206353 2217231 + 102023160 AGCD01060935;GBCQ01178810;XM_005405103 XP_005405160 MODEL 8903871 ncrna LOC102006301 uncharacterized LOC102006301 NW_004955450 13203566 13210711 - 102006301 AGCD01042729;GBDF01222682;XR_001235845;XR_001235847;XR_001235848 MODEL 8735023 protein-coding Sell selectin L ENCODES a protein that exhibits calcium ion binding (ortholog); cell adhesion molecule binding (ortholog); glycolipid binding (ortholog); INVOLVED IN calcium-dependent cell-cell adhesion (ortholog); cellular response to interleukin-8 (ortholog); heterotypic cell-cell adhesion (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); alcohol use disorder (ortholog); alcoholic hepatitis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955462 7591997 7611408 + 102011515 AGCD01049308;GBBH01188171;XM_005398184;XM_005398185;XM_005398186 XP_005398241;XP_005398242;XP_005398243 MODEL 39133307 snorna SNORA62 Small nucleolar RNA SNORA62/SNORA6 family 8924289 protein-coding Ppp1r17 protein phosphatase 1 regulatory subunit 17 ENCODES a protein that exhibits phosphatase inhibitor activity (ortholog); protein phosphatase inhibitor activity (ortholog); protein serine/threonine phosphatase inhibitor activity (ortholog); ASSOCIATED WITH familial hypercholesterolemia (ortholog); Hypercholesterolemia (ortholog) NW_004955410 32720954 32737676 + 102027052 AGCD01011349;XM_005377523;XM_005377524 XP_005377580;XP_005377581 MODEL 8780663 ncrna LOC102005951 uncharacterized LOC102005951 NW_004955429 3029946 3056828 + 102005951 AGCD01028449;AGCD01028450;AGCD01028451;AGCD01028452;AGCD01028453;AGCD01028454;GBDF01054382;XR_261312 MODEL 8721762 pseudo LOC102008585 U6 snRNA-associated Sm-like protein LSm3 pseudogene NW_004955583 83314 85152 - 102008585 AGCD01075793 MODEL 9061346 ncrna LOC102004904 uncharacterized LOC102004904 NW_004955409 15374756 15399313 - 102004904 AGCD01009675;AGCD01009676;GBDF01210918;XR_259784 MODEL 730469512 snorna SNORA40 Small nucleolar RNA SNORA40 8829046 pseudo LOC102019549 small ubiquitin-related modifier 2 pseudogene NW_004955402 7777066 7777353 - 102019549 AGCD01000185 MODEL 8704975 protein-coding Raph1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 INVOLVED IN axon extension (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN cell leading edge (ortholog); plasma membrane (ortholog) NW_004955457 11394572 11462617 + 102030500 AGCD01046968;AGCD01046969;AGCD01046970;GBDF01154438;XM_013520695;XM_013520696;XM_013520697;XM_013520698;XM_013520699;XM_013520700 XP_013376149;XP_013376150;XP_013376151;XP_013376152;XP_013376153;XP_013376154 MODEL 8999496 protein-coding LOC102010931 olfactory receptor 9G4-like NW_004955511 1803413 1804351 - 102010931 AGCD01066380;XM_005407978 XP_005408035 MODEL 8782097 ncrna LOC102011776 uncharacterized LOC102011776 NW_004955421 24690889 24718021 + 102011776 AGCD01022221;GBDF01281561;XR_260824 MODEL 10308939 protein-coding Rsc1a1 regulator of solute carriers 1 ENCODES a protein that exhibits sodium channel inhibitor activity (ortholog); INVOLVED IN intestinal absorption (ortholog); negative regulation of D-glucose transmembrane transport (ortholog); negative regulation of Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN brush border (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955527 2492904 2495318 - 106147202 AGCD01069439;GBCQ01176464;XM_013507398 XP_013362852 MODEL 8821744 protein-coding LOC102004158 protocadherin beta-4 NW_004955415 12759671 12762676 - 102004158 AGCD01016228;AGCD01016229;XM_013512118 XP_013367572 MODEL 8904416 ncrna LOC102003126 uncharacterized LOC102003126 NW_004955478 4555513 4561148 + 102003126 AGCD01055852;GBDF01157448;XR_001230854;XR_001230855 MODEL 8920823 protein-coding Rnf115 ring finger protein 115 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of epidermal growth factor receptor signaling pathway (ortholog); negative regulation of toll-like receptor signaling pathway (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955568 263302 349192 + 102007603 AGCD01074509;AGCD01074510;AGCD01074511;AGCD01074512;AGCD01074513;GBCE01023712;XM_005413441;XM_005413442 XP_005413498;XP_005413499 MODEL 730469338 snorna SNORD113 Small nucleolar RNA SNORD113/SNORD114 family 15036852 trna Trnan-auu transfer RNA asparagine (anticodon AUU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978824 10276254 ncrna LOC106147470 uncharacterized LOC106147470 NW_004955566 1104685 1106212 - 106147470 AGCD01074354;AGCD01074355;GBDK01198338;XR_001232393 MODEL 39133376 snorna SNORD70 Small nucleolar RNA SNORD70 8960817 protein-coding Rcn2 reticulocalbin 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955450 1838836 1854045 + 102019002 AGCD01042371;GBCE01001531;XM_005393477 XP_005393534 MODEL 39133374 snorna SNORD70 Small nucleolar RNA SNORD70 8891668 protein-coding Psd4 pleckstrin and Sec7 domain containing 4 ASSOCIATED WITH esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cleavage furrow (ortholog); plasma membrane (ortholog); ruffle membrane (ortholog) NW_004955470 1084318 1125244 - 102020556 AGCD01052625;AGCD01052626;GBDJ01194240;XM_005400583;XM_013522824;XM_013522825;XM_013522826;XR_001237032 XP_005400640;XP_013378278;XP_013378279;XP_013378280 MODEL 8944247 protein-coding C1qtnf2 C1q and TNF related 2 ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN positive regulation of D-glucose import across plasma membrane (ortholog); positive regulation of fatty acid oxidation (ortholog); positive regulation of glycogen biosynthetic process (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955408 14219263 14266832 - 102026189 AGCD01008389;AGCD01008390;AGCD01008391;GBDI01008429;XM_005376261;XM_005376262;XM_005376264;XM_013508952;XM_013508968 XP_005376318;XP_005376319;XP_005376321;XP_013364406;XP_013364422 MODEL 8742549 protein-coding Wdr48 WD repeat domain 48 ENCODES a protein that exhibits deubiquitinase activator activity (ortholog); DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); embryonic organ development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); late endosome (ortholog); lysosome (ortholog) NW_004955427 24873616 24917691 - 102026998 AGCD01027525;GBDF01050505;XM_005386566;XM_005386567;XM_013515075 XP_005386623;XP_005386624;XP_013370529 MODEL 8864242 protein-coding Srpx2 sushi repeat containing protein X-linked 2 ENCODES a protein that exhibits hepatocyte growth factor binding (ortholog); identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell motility (ortholog); cell-cell adhesion (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); epilepsy (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); excitatory synapse (ortholog) NW_004955503 6795793 6817779 + 102020822 AGCD01064770;GBCQ01123552;XM_005406933;XM_005406934;XM_013505861 XP_005406990;XP_005406991;XP_013361315 MODEL 730469179 snorna SNORA18 Small nucleolar RNA SNORA18 8951135 protein-coding Socs4 suppressor of cytokine signaling 4 PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955409 8522540 8539551 - 102027617 AGCD01009420;GBDK01193050;XM_005376754 XP_005376811 MODEL 8818123 protein-coding LOC102018354 vomeronasal type-2 receptor 116-like NW_004955622 53461 73801 - 102018354 AGCD01077382;AGCD01077383;AGCD01077384;XM_005415017 XP_005415074 MODEL 8798300 ncrna LOC102008216 uncharacterized LOC102008216 NW_004955474 1145810 1151690 + 102008216 AGCD01054239;GBDJ01195565;XR_001230733 MODEL 39133570 snrna U2 U2 spliceosomal RNA 8890532 protein-coding LOC102013346 carcinoembryonic antigen-related cell adhesion molecule 1-like NW_004955555 1051737 1061066 - 102013346 AGCD01073056;AGCD01073057;GBDJ01174557;XM_005412433 XP_005412490 MODEL 8936878 protein-coding Trappc2l trafficking protein particle complex subunit 2L ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog); TRAPP complex (ortholog) NW_004955541 2711051 2715458 + 102005968 AGCD01071423;GBDF01224055;XM_005411023;XM_013507981 XP_005411080;XP_013363435 MODEL 8980825 ncrna LOC102008587 uncharacterized LOC102008587 NW_004955450 5676012 5702239 + 102008587 AGCD01042508;AGCD01042509;GBDF01280526;XR_001235879;XR_262532 MODEL 8821435 protein-coding Ptpn3 protein tyrosine phosphatase non-receptor type 3 ENCODES a protein that exhibits ATPase binding (ortholog); phosphotyrosine residue binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN liver regeneration (ortholog); negative regulation of membrane protein ectodomain proteolysis (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955419 17560664 17645420 + 102018833 AGCD01020159;GBBH01026019;GBCQ01067663;XM_013513248 XP_013368702 MODEL 8972003 protein-coding Loxl3 lysyl oxidase like 3 ENCODES a protein that exhibits fibronectin binding (ortholog); protein-lysine 6-oxidase activity (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); fibronectin fibril organization (ortholog); inflammatory response (ortholog); ASSOCIATED WITH cleft palate (ortholog); Disease Progression (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nucleus (ortholog) NW_004955424 11236415 11255801 + 102023930 AGCD01024559;GBDJ01390337;XM_005385492;XM_013514649;XM_013514650 XP_005385549;XP_013370103;XP_013370104 MODEL 8848333 protein-coding Pja1 praja ring finger ubiquitin ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein catabolic process (ortholog); ASSOCIATED WITH craniofrontonasal syndrome (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955475 8688467 8693010 - 102016154 AGCD01055047;GBDI01173670;XM_005401595;XM_005401596 XP_005401652;XP_005401653 MODEL 8707404 ncrna LOC102019550 uncharacterized LOC102019550 NW_004955402 26587384 26638965 + 102019550 AGCD01000682;GBDF01306098;XR_001236745;XR_259068 MODEL 8923858 pseudo LOC102005598 pre-mRNA-splicing factor SLU7 pseudogene NW_004955419 21338887 21343992 - 102005598 AGCD01020272 MODEL 8919651 protein-coding Eps8l3 EPS8 signaling adaptor L3 ENCODES a protein that exhibits actin filament binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of hair cycle (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); hypotrichosis 5 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955435 13261730 13277117 - 102011142 AGCD01033199;GBDI01324674;XM_005388899;XM_005388900;XM_005388901 XP_005388956;XP_005388957;XP_005388958 MODEL 8964912 pseudo LOC102011785 protein BEX3-like NW_004955425 1246748 1250299 + 102011785 AGCD01025219 MODEL 8823997 protein-coding Spg7 SPG7 matrix AAA peptidase subunit, paraplegin INVOLVED IN anterograde axonal transport (ortholog); mitochondrial outer membrane permeabilization involved in programmed cell death (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH hereditary spastic paraplegia 7 (ortholog); FOUND IN m-AAA complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955541 3092968 3141157 + 102009320 AGCD01071435;AGCD01071436;AGCD01071437;AGCD01071438;GBDF01194852;XM_005411035;XM_005411036 XP_005411092;XP_005411093 MODEL 39133501 snrna U4 U4 spliceosomal RNA 8733975 protein-coding Psen1 presenilin 1 ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); aspartic-type endopeptidase activity (ortholog); ATPase binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid precursor protein metabolic process (ortholog); amyloid-beta formation (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Alzheimer's disease 3 (ortholog); FOUND IN aggresome (ortholog); axon (ortholog); cell cortex (ortholog) NW_004955523 2128529 2210737 - 102029108 AGCD01068558;AGCD01068559;AGCD01068560;GBDF01040780;XM_005409427;XM_005409428;XR_001231938 XP_005409484;XP_005409485 MODEL 8771470 protein-coding Tkfc triokinase and FMN cyclase ENCODES a protein that exhibits FAD-AMP lyase (cyclizing) activity (ortholog); glycerone kinase activity (ortholog); triokinase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); carbohydrate phosphorylation (ortholog); fructose catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Developmental Disabilities (ortholog); FOUND IN cytosol (ortholog) NW_004955511 6200433 6235855 - 102017593 AGCD01066598;GBCE01135212;XM_005408164;XM_005408165;XM_005408166;XM_005408167;XM_005408168 XP_005408221;XP_005408222;XP_005408223;XP_005408224;XP_005408225 MODEL 9006864 protein-coding Rpl12 ribosomal protein L12 ENCODES a protein that exhibits large ribosomal subunit rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); positive regulation of translational elongation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) NW_004955419 1154397 1157508 + 102003134 AGCD01019643;AY533223;GBDK01010817;NM_001282370;XM_005382425 AAS59425;NP_001269299;Q6QMZ7;XP_005382482 PROVISIONAL 8809252 pseudo LOC102016386 eukaryotic initiation factor 4A-I-like NW_004955419 15570893 15571641 - 102016386 AGCD01020083 MODEL 8945916 protein-coding Rapsn receptor associated protein of the synapse ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); ionotropic glutamate receptor binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN establishment of protein localization to postsynaptic membrane (ortholog); neuromuscular junction development (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH anxiety disorder (ortholog); autoimmune disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); neuromuscular junction (ortholog) NW_004955422 826556 834483 + 102021454 AGCD01022437;GBDI01027570;XM_005383970 XP_005384027 MODEL 8815650 pseudo LOC102007454 60 kDa heat shock protein, mitochondrial pseudogene NW_004955429 3122832 3124566 - 102007454 AGCD01028458 MODEL 8918858 protein-coding Rsf1 remodeling and spacing factor 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); histone binding (ortholog); histone octamer slider activity (ortholog); INVOLVED IN chromatin organization (ortholog); chromatin remodeling (ortholog); DNA-templated transcription initiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RSF complex (ortholog) NW_004955414 14084812 14212162 + 102007538 AGCD01015141;AGCD01015142;AGCD01015143;GBDF01221258;XM_005379827;XM_013511807 XP_005379884;XP_013367261 MODEL 8854217 ncrna LOC102003132 uncharacterized LOC102003132 NW_004955417 30984825 30997985 + 102003132 AGCD01018637;GBDF01119746;XR_001233438;XR_001233439;XR_001233440;XR_001233441;XR_001233442 MODEL 8926583 protein-coding LOC102006303 basic salivary proline-rich protein 4-like NW_004955451 12633382 12651062 - 102006303 AGCD01043417;GBCQ01011558;XM_005394240;XR_001235989 XP_005394297 MODEL 730469415 snorna SNORD113 Small nucleolar RNA SNORD113/SNORD114 family 8777906 ncrna LOC102022433 uncharacterized LOC102022433 NW_004955444 14294781 14303672 - 102022433 AGCD01039120;AGCD01039121;GBDF01186408;XR_001235524;XR_262271 MODEL 8962580 protein-coding Plk2 polo like kinase 2 ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); ATPase binding (ortholog); clathrin heavy chain binding (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); long-term synaptic depression (ortholog); long-term synaptic potentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); chromatin (ortholog) NW_004955446 9671090 9676956 + 102008994 AGCD01040162;GBDF01005861;XM_005392671 XP_005392728 MODEL 8990038 protein-coding Selp selectin P ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); fucose binding (ortholog); INVOLVED IN calcium-dependent cell-cell adhesion (ortholog); cell-cell adhesion (ortholog); heterophilic cell-cell adhesion (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute necrotizing pancreatitis (ortholog); allergic disease (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); membrane (ortholog) NW_004955462 7658371 7692870 + 102012290 AGCD01049309;GBBH01131804;XM_005398187 XP_005398244 MODEL 8894456 protein-coding Rnf121 ring finger protein 121 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955414 19332670 19423711 - 102006018 AGCD01015312;AGCD01015313;AGCD01015314;AGCD01015315;GBDI01220170;XM_005380019 XP_005380076 MODEL 9007676 ncrna LOC102005952 uncharacterized LOC102005952 NW_004955429 17092345 17096969 - 102005952 AGCD01028845;GBCQ01165026;XR_001234501;XR_001234502;XR_001234503;XR_261348 MODEL 730468957 snorna SNORA40 Small nucleolar RNA SNORA40 8963868 protein-coding LOC102004907 speedy protein E4-like NW_004955460 10750151 10756120 + 102004907 AGCD01048604;GBDF01286262;XM_005397847;XM_013521141 XP_005397904;XP_013376595 MODEL 8740934 ncrna LOC102010158 uncharacterized LOC102010158 NW_004955417 26308543 26333124 + 102010158 AGCD01018505;GBBH01097094;XR_001233384;XR_001233385 MODEL 8850563 protein-coding Prkg1 protein kinase cGMP-dependent 1 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); cGMP binding (ortholog); cGMP-dependent protein kinase activity (ortholog); INVOLVED IN cell growth involved in cardiac muscle cell development (ortholog); cerebellum development (ortholog); collateral sprouting (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); amphetamine abuse (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955425 6176335 7335867 + 102005487 AGCD01025366;AGCD01025367;AGCD01025368;AGCD01025369;AGCD01025370;AGCD01025371;AGCD01025372;AGCD01025373;AGCD01025374;AGCD01025375;AGCD01025376;AGCD01025377;AGCD01025378;AGCD01025379;AGCD01025380;AGCD01025381;AGCD01025382;GBDK01040552;XM_005385905;XM_005385906 XP_005385962;XP_005385963 MODEL 8940122 protein-coding LOC102008972 uncharacterized LOC102008972 NW_004955515 4155520 4227819 - 102008972 AGCD01067316;AGCD01067317;GBCE01099088;XM_013506861 XP_013362315 MODEL 730469394 snorna SNORD70 Small nucleolar RNA SNORD70 8739011 protein-coding Phf7 PHD finger protein 7 ENCODES a protein that exhibits histone H3K14 ubiquitin ligase activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of osteoclast proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955430 2400866 2413188 + 102016833 AGCD01029165;GBDF01008480;XM_005415258 XP_005415315 MODEL 8765968 pseudo LOC102019883 60S ribosomal protein L17 pseudogene NW_004955452 1122314 1123197 + 102019883 AGCD01043831 MODEL 9026158 ncrna LOC102011320 uncharacterized LOC102011320 NW_004955485 7682452 7684730 - 102011320 AGCD01058670;GBCB01006341;XR_263922 MODEL 8754136 protein-coding Sgca sarcoglycan alpha INVOLVED IN response to denervation involved in regulation of muscle adaptation (ortholog); skeletal muscle tissue regeneration (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2D (ortholog); FOUND IN cell-cell junction (ortholog); dystroglycan complex (ortholog); membrane raft (ortholog) NW_004955451 11490891 11501618 - 102012394 AGCD01043355;AGCD01043356;GBCQ01015636;GBDI01122074;XM_013519105 XP_013374559 MODEL 8724001 pseudo LOC102010932 olfactory receptor 10AG1-like NW_004955511 901202 903998 - 102010932 AGCD01066346 MODEL 8908808 ncrna LOC102004159 uncharacterized LOC102004159 NW_004955416 4090802 4096376 - 102004159 AGCD01016880;AGCD01016881;GBDF01075670;XR_001233284;XR_260352;XR_260353 MODEL 9006521 protein-coding LOC102018356 large proline-rich protein BAG6-like NW_004955452 7679732 7684898 + 102018356 AGCD01044181;AGCD01044182;GBDI01323361;XM_005394959;XM_013519492 XP_005395016;XP_013374946 MODEL 8720593 protein-coding Ppp1r18 protein phosphatase 1 regulatory subunit 18 ASSOCIATED WITH esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955583 673634 681439 - 102018043 AGCD01075848;AGCD01075849;AGCD01075850;GBDI01067824;GBDK01075378;XM_005414315 XP_005414372 MODEL 8978226 trna Trnan-guu transfer RNA asparagine (anticodon GUU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978825 AGCD01028556;AGCD01030347;AGCD01043507;AGCD01049456;AGCD01052199;AGCD01062085;AGCD01080156 MODEL 8733046 protein-coding Rcn3 reticulocalbin 3 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN collagen biosynthetic process (ortholog); ERAD pathway (ortholog); lung epithelium development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955559 1309621 1319925 - 102012810 AGCD01073640;GBCQ01100573;XM_005412867;XM_013509004;XM_013509005;XM_013509006 XP_005412924;XP_013364458;XP_013364459;XP_013364460 MODEL 8937257 protein-coding Trappc3 trafficking protein particle complex subunit 3 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); hepatocellular carcinoma (ortholog); lymphoma (ortholog); FOUND IN cytosol (ortholog); Golgi membrane (ortholog); TRAPP complex (ortholog) NW_004955452 14160612 14172896 - 102027140 AGCD01044453;AGCD01044454;GBCC01015358;XM_005395172;XM_005395173;XM_005395174;XM_005395175 XP_005395229;XP_005395230;XP_005395231;XP_005395232 MODEL 8712674 protein-coding LOC102012144 cytochrome b5 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN response to cadmium ion (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955402 57701931 57739163 - 102012144 AGCD01001508;AGCD01001509;GBDK01022341;XM_005373076 XP_005373133 MODEL 9063794 protein-coding Wdr49 WD repeat domain 49 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog) NW_004955448 16701241 16840180 - 102011823 AGCD01041701;AGCD01041702;AGCD01041703;GBDK01313375;XM_013518658;XM_013518659;XM_013518660;XM_013518661;XM_013518662;XM_013518663 XP_013374112;XP_013374113;XP_013374114;XP_013374115;XP_013374116;XP_013374117 MODEL 9010991 protein-coding Srr serine racemase ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); D-serine ammonia-lyase activity (ortholog); INVOLVED IN D-serine biosynthetic process (ortholog); L-serine metabolic process (ortholog); pyruvate biosynthetic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) NW_004955481 919692 940066 - 102009835 AGCD01056816;AGCD01056817;AGCD01056818;GBDK01341785;XM_005402588;XM_013503364;XM_013503365;XM_013503366;XM_013503367;XM_013503368;XM_013503369;XM_013503370;XM_013503371;XM_013503372;XM_013503373;XM_013503374 XP_005402645;XP_013358818;XP_013358819;XP_013358820;XP_013358821;XP_013358822;XP_013358823;XP_013358824;XP_013358825;XP_013358826;XP_013358827;XP_013358828 MODEL 8810267 protein-coding C1qtnf3 C1q and TNF related 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); glucose homeostasis (ortholog); intracellular triglyceride homeostasis (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955426 19588637 19606557 - 102028440 AGCD01026549;GBCB01010684;XM_005386168;XM_005386169 XP_005386225;XP_005386226 MODEL 730469570 snorna SNORA18 Small nucleolar RNA SNORA18 8994818 protein-coding Epsti1 epithelial stromal interaction 1 INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to type II interferon (ortholog); gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955518 790815 919869 - 102004964 AGCD01067745;AGCD01067746;AGCD01067747;AGCD01067748;AGCD01067749;GBDI01325591;XM_005409056;XM_013506970;XM_013506971 XP_005409113;XP_013362424;XP_013362425 MODEL 8870438 protein-coding Polr1g RNA polymerase I subunit G INVOLVED IN rRNA transcription (ortholog); transcription elongation by RNA polymerase I (ortholog); transcription initiation at RNA polymerase I promoter (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); multiple myeloma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955555 2389569 2393410 + 102013014 AGCD01073149;GBDF01040878;XM_005412525;XM_013508708 XP_005412582;XP_013364162 MODEL 9019987 protein-coding Socs5 suppressor of cytokine signaling 5 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN cellular response to low-density lipoprotein particle stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955441 13593342 13657389 + 102014611 AGCD01037155;AGCD01037156;AGCD01037157;GBCB01059474;GBDJ01349288;XM_005390984 XP_005391041 MODEL 8998264 protein-coding Rhbdl1 rhomboid like 1 ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955442 16525009 16528780 - 102021604 AGCD01037901;GBDF01194169;XM_005391625;XM_005391626;XM_005391627;XM_013517764;XM_013517765;XM_013517766 XP_005391682;XP_005391683;XP_005391684;XP_013373218;XP_013373219;XP_013373220 MODEL 39133572 snrna U2 U2 spliceosomal RNA 8897957 ncrna LOC102008217 uncharacterized LOC102008217 NW_004955474 7214695 7216543 - 102008217 AGCD01054516;GBDF01280192;XR_263600 MODEL 8840430 protein-coding Sphk1 sphingosine kinase 1 ENCODES a protein that exhibits acetyltransferase activity (ortholog); ATP binding (ortholog); calmodulin binding (ortholog); INVOLVED IN blood vessel development (ortholog); brain development (ortholog); calcium-mediated signaling (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Fibrosis (ortholog); high grade glioma (ortholog); FOUND IN axon (ortholog); clathrin-coated pit (ortholog); cytoplasm (ortholog) NW_004955506 5902079 5906639 - 102025488 AGCD01065391;GBCE01068400;XM_013506023 XP_013361477 MODEL 8807542 protein-coding LOC102016389 olfactory receptor 4B1-like NW_004955422 316985 318321 + 102016389 AGCD01022404;XM_005383950 XP_005384007 MODEL 8750141 protein-coding Tkt transketolase ENCODES a protein that exhibits calcium ion binding (ortholog); carbohydrate binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN D-xylulose 5-phosphate biosynthetic process (ortholog); glyceraldehyde-3-phosphate biosynthetic process (ortholog); pentose-phosphate shunt (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - non-oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); nuclear body (ortholog) NW_004955430 3178830 3193241 - 102029887 AGCD01029194;GBCE01001144;GBDF01082121;XM_005387366 XP_005387423 MODEL 9052373 protein-coding Slc36a4 solute carrier family 36 member 4 ENCODES a protein that exhibits L-alanine transmembrane transporter activity (ortholog); L-proline transmembrane transporter activity (ortholog); L-tryptophan transmembrane transporter activity (ortholog); INVOLVED IN L-alanine transport (ortholog); proline transport (ortholog); tryptophan transport (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955414 1236179 1286680 + 102028078 AGCD01014760;GBCE01159453;XM_005379715;XM_005379716;XM_005379717;XM_005379718;XM_005379719;XM_013512056;XM_013512057 XP_005379772;XP_005379773;XP_005379774;XP_005379775;XP_005379776;XP_013367510;XP_013367511 MODEL 8847922 protein-coding LOC102003136 histone H2A type 1-A FOUND IN nucleoplasm (ortholog) NW_004955483 1358562 1359048 + 102003136 AGCD01057645;GBDF01054005;XM_005403345 XP_005403402 MODEL 8877859 pseudo LOC102008588 tetratricopeptide repeat protein 14 pseudogene NW_004955402 62282155 62283653 - 102008588 AGCD01001640 MODEL 8720376 protein-coding LOC102005953 olfactory receptor 5B2-like NW_004955511 3211089 3212036 - 102005953 AGCD01066450;XM_013506385 XP_013361839 MODEL 8727280 protein-coding Loxl4 lysyl oxidase like 4 ENCODES a protein that exhibits protein-lysine 6-oxidase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955507 4229284 4260005 - 102004405 AGCD01065642;AGCD01065643;AGCD01065644;AGCD01065645;GBDI01328500;GBDK01396522;XM_013506211 XP_013361665 MODEL 10068095 protein-coding LOC106147471 glycine, alanine and asparagine-rich protein-like NW_004955566 1371636 1373667 + 106147471 AGCD01074358;XM_013509212 XP_013364666 MODEL 8936850 pseudo LOC102005606 eukaryotic translation initiation factor 5A-2 pseudogene NW_004955422 22271814 22272275 - 102005606 AGCD01023153 MODEL 8936487 protein-coding Pja2 praja ring finger ubiquitin ligase 2 ENCODES a protein that exhibits cAMP-dependent protein kinase inhibitor activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN inflammatory response (ortholog); innate immune response (ortholog); long-term memory (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955418 5429038 5493393 + 102020120 AGCD01018843;AGCD01018844;GBCQ01002274;XM_005382175 XP_005382232 MODEL 8834882 protein-coding Ptpn4 protein tyrosine phosphatase non-receptor type 4 ENCODES a protein that exhibits glutamate receptor binding (ortholog); non-membrane spanning protein tyrosine phosphatase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); membrane (ortholog) NW_004955459 9803421 9981392 - 102020217 AGCD01048171;AGCD01048172;AGCD01048173;AGCD01048174;AGCD01048175;AGCD01048176;AGCD01048177;GBDI01108232;XM_005397664;XM_013521057;XM_013521058;XM_013521059 XP_005397721;XP_013376511;XP_013376512;XP_013376513 MODEL 39133305 snorna SNORA62 Small nucleolar RNA SNORA62/SNORA6 family 8700555 protein-coding LOC102012146 3-alpha-hydroxysteroid sulfotransferase-like NW_004955609 372015 408109 - 102012146 AGCD01077059;AGCD01077060;GBDI01156067;XM_005414932 XP_005414989 MODEL 8746305 pseudo LOC102011791 nuclear receptor-binding factor 2-like NW_004955512 4113871 4117507 - 102011791 AGCD01066729 MODEL 39133502 snrna U4 U4 spliceosomal RNA 8964911 pseudo LOC102010935 histone-binding protein RBBP4 pseudogene NW_004955515 5132224 5133419 - 102010935 AGCD01067339 MODEL 8751617 protein-coding LOC102004164 coiled-coil domain-containing protein 92 NW_004955481 559327 573930 + 102004164 AGCD01056795;AGCD01056796;AGCD01056797;XM_005402916 XP_005402973 MODEL 8824129 pseudo LOC102013349 small nuclear ribonucleoprotein E pseudogene NW_004955442 15952452 15954108 + 102013349 AGCD01037888;AGCD01037889 MODEL 8835262 ncrna LOC102007455 uncharacterized LOC102007455 NW_004955512 5582577 5590157 - 102007455 AGCD01066771;GBDF01177427;XR_264450 MODEL 9045523 protein-coding Psen2 presenilin 2 ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); endopeptidase activity (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid-beta formation (ortholog); amyloid-beta metabolic process (ortholog); PARTICIPATES IN altered Notch signaling pathway involving the macromolecules modifying the main players; Alzheimer's disease pathway; Notch signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); agnosia (ortholog); Alzheimer's disease (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytosol (ortholog) NW_004955406 5727367 5748798 + 102025650 AGCD01005739;GBCB01041147;GBCE01074852;XM_005374755 XP_005374812 MODEL 8962882 protein-coding LOC102022435 translation initiation factor IF-2-like NW_004955568 1247450 1253659 - 102022435 AGCD01074543;GBDF01071304;XM_013509329 XP_013364783 MODEL 730469417 snorna SNORD113 Small nucleolar RNA SNORD113/SNORD114 family 8900586 trna Trnap-agg transfer RNA proline (anticodon AGG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978806 AGCD01015187;AGCD01037806;AGCD01049336;AGCD01056483;AGCD01057606;AGCD01072566 MODEL 8842898 pseudo LOC102004908 60S ribosomal protein L30 pseudogene NW_004955409 17443551 17444672 - 102004908 AGCD01009784 MODEL 8965816 ncrna LOC102006305 uncharacterized LOC102006305 NW_004955404 24896406 24991834 - 102006305 AGCD01003836;AGCD01003837;AGCD01003838;AGCD01003839;AGCD01003840;GBDF01084048;XR_001235103;XR_001235104 MODEL 8746468 protein-coding LOC102018360 maestro heat-like repeat family member 5 NW_004955454 1331678 1366820 - 102018360 AGCD01044968;GBDI01324363;XM_013520086;XM_013520087;XM_013520088;XM_013520089;XM_013520090 XP_013375540;XP_013375541;XP_013375542;XP_013375543;XP_013375544 MODEL 150537106 snorna SNORD71 Small nucleolar RNA SNORD71 8755462 protein-coding Plk3 polo like kinase 3 ENCODES a protein that exhibits p53 binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); DNA damage response (ortholog); G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast carcinoma (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955464 13419562 13424104 - 102006642 AGCD01050275;GBBH01135021;GBCE01163140;XM_013521627;XM_013521628 XP_013377081;XP_013377082 MODEL 9044391 pseudo LOC102010159 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like NW_004955417 3869752 3882123 - 102010159 AGCD01017930;AGCD01017931 MODEL 9000083 pseudo LOC102008973 translationally-controlled tumor protein pseudogene NW_004955516 2157659 2158275 + 102008973 AGCD01067449 MODEL 8824404 protein-coding Trappc3l trafficking protein particle complex subunit 3L ASSOCIATED WITH sarcoma (ortholog); FOUND IN TRAPP complex (ortholog) NW_004955526 120620 217855 + 102025940 AGCD01069212;AGCD01069213;AGCD01069214;AGCD01069215;GBCQ01154261;XM_005409744;XM_013507364;XM_013507365;XM_013507366;XM_013507367;XM_013507368 XP_005409801;XP_013362818;XP_013362819;XP_013362820;XP_013362821;XP_013362822 MODEL 8921602 protein-coding Prkg2 protein kinase cGMP-dependent 2 ENCODES a protein that exhibits cGMP-dependent protein kinase activity (ortholog); identical protein binding (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH acromesomelic dysplasia 4 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear membrane (ortholog); plasma membrane (ortholog) NW_004955433 5286594 5387571 - 102027779 AGCD01031498;GBDK01324335;XM_005388221;XM_005388222;XM_005388223;XM_013516090 XP_005388278;XP_005388279;XP_005388280;XP_013371544 MODEL 9014419 ncrna LOC102019884 uncharacterized LOC102019884 NW_004955453 15567192 15594161 - 102019884 AGCD01044894;GBDF01187134;XR_001236126;XR_262747 MODEL 9023550 ncrna LOC102011323 uncharacterized LOC102011323 NW_004955422 1718157 1721300 + 102011323 AGCD01022470;GBDF01161787;XR_260843 MODEL 8908494 protein-coding Phf8 PHD finger protein 8 ENCODES a protein that exhibits chromatin binding (ortholog); histone demethylase activity (ortholog); histone H3K27me2/H3K27me3 demethylase activity (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); negative regulation of rDNA heterochromatin formation (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955475 1105619 1230758 - 102019908 AGCD01054733;AGCD01054734;AGCD01054735;AGCD01054736;AGCD01054737;AGCD01054738;GBCB01086765;XM_005401514;XM_005401515;XM_005401516 XP_005401571;XP_005401572;XP_005401573 MODEL 8871222 protein-coding Sgcb sarcoglycan beta INVOLVED IN cardiac muscle cell development (ortholog); gene expression (ortholog); glucose homeostasis (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2E (ortholog); cardiomyopathy (ortholog); FOUND IN dystroglycan complex (ortholog); dystrophin-associated glycoprotein complex (ortholog); plasma membrane (ortholog) NW_004955447 18459562 18472367 + 102011377 AGCD01041174;AGCD01041175;GBDJ01180305;GBDK01317787;XM_013518513 XP_013373967 MODEL 8964156 protein-coding Ppp1r1a protein phosphatase 1 regulatory inhibitor subunit 1A ASSOCIATED WITH Cardiac Arrhythmias (ortholog); cardiomyopathy (ortholog); congestive heart failure (ortholog); FOUND IN extracellular region (ortholog) NW_004955458 1819366 1823864 - 102013478 AGCD01047205;GBCQ01008716;GBDI01013591;XM_013520994 XP_013376448 MODEL 9044170 protein-coding Selplg selectin P ligand ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN cellular response to interleukin-6 (ortholog); leukocyte adhesive activation (ortholog); leukocyte migration (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Breast Cancer, Familial (ortholog); carotid artery disease (ortholog); FOUND IN plasma membrane (ortholog); plasma membrane raft (ortholog); uropod (ortholog) NW_004955455 9883271 9892572 - 102025759 AGCD01045931;AGCD01045932;GBDI01121877;XM_005396467;XM_005396469;XM_005396472 XP_005396524;XP_005396526;XP_005396529 MODEL 9007799 protein-coding Rara retinoic acid receptor alpha ENCODES a protein that exhibits alpha-actinin binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); bone development (ortholog); cellular response to estrogen stimulus (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955451 14876663 14917134 + 102012391 AGCD01043579;AGCD01043580;AGCD01043581;AGCD01043582;GBDF01083494;GBDK01083214;XM_005394357;XM_013519320;XM_013519321;XM_013519322 XP_005394414;XP_013374774;XP_013374775;XP_013374776 MODEL 730468964 snorna SNORA40 Small nucleolar RNA SNORA40 9056604 protein-coding LOC102016392 zinc finger protein 699-like NW_004955495 356991 361711 + 102016392 AGCD01061625;GBCE01013017;GBDF01253415;XM_013505078 XP_013360532 MODEL 8894167 protein-coding Tktl1 transketolase like 1 ENCODES a protein that exhibits transketolase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) NW_004955580 829653 851422 + 102027129 AGCD01075625;AGCD01075626;GBDF01008565;XM_005414185 XP_005414242 MODEL 8940300 protein-coding Srrd SRR1 domain containing INVOLVED IN regulation of circadian rhythm (ortholog); regulation of heme biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955455 1076113 1090346 + 102015806 AGCD01045568;GBDF01188676;XM_005396149;XM_005396150;XM_005396151;XM_005396152 XP_005396206;XP_005396207;XP_005396208;XP_005396209 MODEL 8845975 protein-coding Wdr5 WD repeat domain 5 ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); histone H3K4me1 reader activity (ortholog); histone H3Q5ser reader activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); neuron projection development (ortholog); positive regulation of gluconeogenesis (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN ATAC complex (ortholog); histone acetyltransferase complex (ortholog); histone methyltransferase complex (ortholog) NW_004955513 3198655 3213754 + 102023728 AGCD01066899;GBDI01187396;XM_005408463;XM_013506677 XP_005408520;XP_013362131 MODEL 730469491 snorna SNORA18 Small nucleolar RNA SNORA18 8830548 protein-coding C1qtnf4 C1q and TNF related 4 INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); gene expression (ortholog); inflammatory response (ortholog); FOUND IN extracellular region (ortholog) NW_004955422 705165 709261 + 102006787 AGCD01022431;AGCD01022432;GBCE01179740;GBDK01218895;XM_013514050 XP_013369504 MODEL 8919609 protein-coding Rpl13 ribosomal protein L13 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN bone development (ortholog); cytoplasmic translation (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955541 3149438 3152210 + 102009877 AGCD01071438;GBBH01004209;XM_005411037 XP_005411094 MODEL 8934931 protein-coding Trappc4 trafficking protein particle complex subunit 4 INVOLVED IN autophagy (ortholog); dendrite development (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Deglutition Disorders (ortholog); FOUND IN dendrite (ortholog); Golgi membrane (ortholog); Golgi stack (ortholog) NW_004955412 20129154 20133043 + 102022576 AGCD01012994;GBDF01004559;XM_005378290 XP_005378347 MODEL 8858677 ncrna LOC102012147 uncharacterized LOC102012147 NW_004955652 44834 52840 - 102012147 AGCD01077823;AGCD01077824;GBBH01127077;XR_265180 MODEL 39133573 snrna U2 U2 spliceosomal RNA 9040908 protein-coding Socs6 suppressor of cytokine signaling 6 INVOLVED IN intracellular glucose homeostasis (ortholog); negative regulation of T cell activation (ortholog); proteasomal protein catabolic process (ortholog); PARTICIPATES IN insulin signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN immunological synapse (ortholog) NW_004955402 53847859 53876245 + 102005983 AGCD01001374;AGCD01001375;AGCD01001376;AGCD01001377;GBCB01073847;XM_005373056;XM_005373057 XP_005373113;XP_005373114 MODEL 8724324 protein-coding Ptpn5 protein tyrosine phosphatase non-receptor type 5 ENCODES a protein that exhibits identical protein binding (ortholog); phosphotyrosine residue binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN exploration behavior (ortholog); negative regulation of MAP kinase activity (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); PARTICIPATES IN dopamine signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); Nerve Degeneration (ortholog); FOUND IN axon (ortholog); neuronal cell body (ortholog); perikaryon (ortholog) NW_004955414 33381783 33436974 - 102025349 AGCD01015805;AGCD01015806;GBDF01076364;XM_005380426;XM_013512076 XP_005380483;XP_013367530 MODEL 8964771 protein-coding Rnf122 ring finger protein 122 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of mitochondrial membrane potential (ortholog); positive regulation of apoptotic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955463 9684546 9699939 - 102008388 AGCD01049795;GBBH01005192;XM_005398405 XP_005398462 MODEL 9033362 protein-coding Rhbdl2 rhomboid like 2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955452 16506830 16553594 - 102020301 AGCD01044514;GBDF01188796;XM_005395233;XM_005395235 XP_005395290;XP_005395292 MODEL 9060172 protein-coding LOC102013350 kallikrein-4-like NW_004955559 2994 9200 + 102013350 AGCD01073532;XM_013508937 XP_013364391 MODEL 730469433 snorna SNORD113 Small nucleolar RNA SNORD113/SNORD114 family 9027686 protein-coding Sphk2 sphingosine kinase 2 ENCODES a protein that exhibits histone binding (ortholog); sphingosine kinase activity (ortholog); sphingosine-1-phosphate receptor activity (ortholog); INVOLVED IN blood vessel development (ortholog); brain development (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); PARTICIPATES IN ceramide signaling pathway; Fabry disease pathway; Gaucher's disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955559 1921479 1929450 - 102007376 AGCD01073682;GBDI01222339;XM_005412942;XM_005412943;XM_005412944;XM_005412946;XM_013508996 XP_005412999;XP_005413000;XP_005413001;XP_005413003;XP_013364450 MODEL 8893441 protein-coding Slc37a1 solute carrier family 37 member 1 ENCODES a protein that exhibits glucose 6-phosphate:phosphate antiporter activity (ortholog); INVOLVED IN glucose-6-phosphate transport (ortholog); phosphate ion transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955407 39203934 39268273 - 102010551 AGCD01007823;AGCD01007824;GBBH01090368;XM_005375814;XM_005375818;XM_005375819;XM_005375820;XM_005375822;XR_001231341;XR_001231343 XP_005375871;XP_005375875;XP_005375876;XP_005375877;XP_005375879 MODEL 730468995 snorna SNORA40 Small nucleolar RNA SNORA40 8803096 protein-coding LOC102019554 solute carrier family 22 member 9 NW_004955599 192839 200622 + 102019554 AGCD01076629;AGCD01076630;GBDF01226037;XM_013510037 XP_013365491 MODEL 8721763 protein-coding LOC102008589 protein FAM170A-like NW_004955644 8842 16020 + 102008589 AGCD01077727;GBDF01075273;XM_005415048;XM_005415049 XP_005415105;XP_005415106 MODEL 8768936 pseudo LOC102005954 ZZ-type zinc finger-containing protein 3 pseudogene NW_004955430 8912029 8917478 - 102005954 AGCD01029398 MODEL 8778156 protein-coding LOC102005607 uncharacterized protein C7orf34 homolog NW_004955494 875367 876635 + 102005607 AGCD01061387;GBDF01006174;XM_005405389;XM_005405390 XP_005405446;XP_005405447 MODEL 8841343 protein-coding LOC102006309 UDP-glucuronosyltransferase 1-8 NW_004955453 2386649 2547914 - 102006309 AGCD01044625;AGCD01044626;AGCD01044627;AGCD01044628;AGCD01044629;AGCD01044630;AGCD01044631;GBDI01068255;XM_005395338;XM_005395339;XM_005395340;XM_005395341;XM_013519894;XM_013519895;XM_013519897;XM_013519898 XP_005395395;XP_005395396;XP_005395397;XP_005395398;XP_013375348;XP_013375349;XP_013375351;XP_013375352 MODEL 8917192 protein-coding Rskr ribosomal protein S6 kinase related NW_004955481 4544798 4549005 + 102028536 AGCD01056943;GBDJ01001838;XM_005402741;XM_013503448 XP_005402798;XP_013358902 MODEL 8817094 protein-coding Epx eosinophil peroxidase ENCODES a protein that exhibits lactoperoxidase activity (ortholog); peroxidase activity (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); defense response to nematode (ortholog); eosinophil migration (ortholog); ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); Eosinophilic Asthma (ortholog) NW_004955451 4818809 4828913 - 102029463 AGCD01043142;GBBH01198007;XM_005394034;XM_005394035 XP_005394091;XP_005394092 MODEL 39133310 snorna SNORA62 Small nucleolar RNA SNORA62/SNORA6 family 8703055 protein-coding Polr1h RNA polymerase I subunit H INVOLVED IN transcription elongation by RNA polymerase I (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Experimental Neoplasms (ortholog); Stomach Neoplasms (ortholog); FOUND IN fibrillar center (ortholog); RNA polymerase I complex (ortholog) NW_004955583 191252 195563 + 102010006 AGCD01075801;AGCD01075802;GBDF01080016;XM_005414292;XM_005414293 XP_005414349;XP_005414350 MODEL 8888912 protein-coding LOC102011792 phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 NW_004955431 5628023 5671009 + 102011792 AGCD01030037;AGCD01030038;XM_013515893;XM_013515894 XP_013371347;XP_013371348 MODEL 8876171 ncrna LOC102004166 uncharacterized LOC102004166 NW_004955420 12275770 12281651 + 102004166 AGCD01020858;GBDK01325905;XR_001233691;XR_260708 MODEL 8732733 protein-coding Rcor1 REST corepressor 1 ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN DNA repair complex (ortholog); histone methyltransferase complex (ortholog); nucleoplasm (ortholog) NW_004955538 1774910 1880550 + 102003586 AGCD01071088;AGCD01071089;GBDF01187302;GBDJ01279131;XM_005410756;XM_013507882 XP_005410813;XP_013363336 MODEL 150537110 snorna SNORD72 Small nucleolar RNA SNORD72 8768224 ncrna LOC102004911 uncharacterized LOC102004911 NW_004955462 11137547 11152480 + 102004911 AGCD01049385;AGCD01049386;GBDF01120647;XR_263127;XR_263128 MODEL 8712869 pseudo LOC102018362 U2 snRNP-associated SURP motif-containing protein pseudogene NW_004955406 30253163 30256294 - 102018362 AGCD01006363 MODEL 8837390 protein-coding Plk4 polo like kinase 4 ENCODES a protein that exhibits identical protein binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN centriole replication (ortholog); cilium assembly (ortholog); de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); breast ductal carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cleavage furrow (ortholog) NW_004955428 13548485 13566786 - 102005492 AGCD01027958;AGCD01027959;GBDF01044579;XM_005386739 XP_005386796 MODEL 8717808 pseudo LOC102008974 DNA primase small subunit pseudogene NW_004955434 12000624 12001975 + 102008974 AGCD01032382 MODEL 10087470 protein-coding LOC106147472 putative DNA helicase ino80 NW_004955566 1378986 1382229 - 106147472 AGCD01074358;XM_013509213 XP_013364667 MODEL 8766523 protein-coding LOC102019885 zinc finger protein 682-like NW_004955454 7307891 7332318 - 102019885 AGCD01045294;GBCC01007309;XM_013520220 XP_013375674 MODEL 9022818 ncrna LOC102011333 uncharacterized LOC102011333 NW_004955424 5069373 5154243 + 102011333 AGCD01024384;GBDF01080540;XR_001234147;XR_261043 MODEL 8883716 protein-coding Prkn parkin RBR E3 ubiquitin protein ligase ENCODES a protein that exhibits actin binding (ortholog); beta-catenin binding (ortholog); cullin family protein binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); aggresome assembly (ortholog); autophagy of mitochondrion (ortholog); PARTICIPATES IN altered mitochondrial autophagy pathway; mitochondrial autophagy pathway; Parkinson's disease pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Animal Disease Models (ortholog); autistic disorder (ortholog); FOUND IN aggresome (ortholog); axon (ortholog); cytoplasm (ortholog) NW_004955439 18664230 19953358 + 102007700 AGCD01036062;AGCD01036063;AGCD01036064;AGCD01036065;AGCD01036066;AGCD01036067;AGCD01036068;AGCD01036069;AGCD01036070;AGCD01036071;AGCD01036072;AGCD01036073;AGCD01036074;AGCD01036075;AGCD01036076;AGCD01036077;AGCD01036078;AGCD01036079;AGCD01036080;AGCD01036081;AGCD01036082;AGCD01036083;AGCD01036084;AGCD01036085;AGCD01036086;AGCD01036087;AGCD01036088;AGCD01036089;AGCD01036090;AGCD01036091;AGCD01036092;AGCD01036093;AGCD01036094;AGCD01036095;AGCD01036096;GBDF01253845;XM_005390686;XM_005390687;XM_005390688;XM_005390689 XP_005390743;XP_005390744;XP_005390745;XP_005390746 MODEL 8995558 protein-coding C1qtnf5 C1q and TNF related 5 ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor inhibitor activity (ortholog); INVOLVED IN inner ear development (ortholog); protein secretion (ortholog); ASSOCIATED WITH isolated microphthalmia 5 (ortholog); late-onset retinal degeneration (ortholog); lens disease (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); extracellular region (ortholog) NW_004955412 20419754 20421541 - 102006558 AGCD01013008;GBDI01171673;XM_005378334 XP_005378391 MODEL 39133503 snrna U4 U4 spliceosomal RNA 8986116 pseudo LOC102010940 T-complex protein 1 subunit zeta-like NW_004955523 256492 260604 - 102010940 AGCD01068440 MODEL 8714543 pseudo LOC102007462 vesicle-associated membrane protein 8 pseudogene NW_004955434 10962508 10964570 + 102007462 AGCD01032368 MODEL 8763603 protein-coding Sgcd sarcoglycan delta INVOLVED IN calcium ion homeostasis (ortholog); calcium-mediated signaling (ortholog); cardiac muscle cell contraction (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2F (ortholog); Breast Cancer, Familial (ortholog); FOUND IN dystroglycan complex (ortholog); dystrophin-associated glycoprotein complex (ortholog); plasma membrane (ortholog) NW_004955408 10273344 10820108 + 102010673 AGCD01008265;AGCD01008266;AGCD01008267;AGCD01008268;AGCD01008269;AGCD01008270;AGCD01008271;AGCD01008272;AGCD01008273;AGCD01008274;GBCE01162943;XM_005376219;XM_013508746 XP_005376276;XP_013364200 MODEL 8740453 protein-coding Rpl13a ribosomal protein L13a ENCODES a protein that exhibits mRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to gamma radiation (ortholog); cellular response to type II interferon (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) NW_004955559 1358479 1362663 - 102013977 AGCD01073641;GBDK01017734;XM_005412872 XP_005412929 MODEL 8866196 trna Trnap-cgg transfer RNA proline (anticodon CGG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955467;NW_004955442;NW_004955465;NW_004955462 8707836;14202081;13093914;9311560 8707907;14202152;13093985;9311631 +;+;+;- 101978809 AGCD01037806;AGCD01049336;AGCD01050584;AGCD01051466 MODEL 9053163 pseudo LOC102022436 60S ribosomal protein L9 pseudogene NW_004955445 2549893 2557067 - 102022436 AGCD01039357;AGCD01039358 MODEL 8818861 protein-coding Ppp1r1b protein phosphatase 1 regulatory inhibitor subunit 1B ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); D2 dopamine receptor binding (ortholog); D3 dopamine receptor binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cellular response to cocaine (ortholog); DNA-templated transcription (ortholog); PARTICIPATES IN dopamine signaling pathway; ASSOCIATED WITH bipolar disorder (ortholog); Brain Hypoxia-Ischemia (ortholog); brain infarction (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine head (ortholog); dendritic spine neck (ortholog) NW_004955451 14378186 14394910 + 102020077 AGCD01043550;AGCD01043551;AGCD01043552;GBDI01001254;XM_013519237 XP_013374691 MODEL 8835493 ncrna LOC102013351 uncharacterized LOC102013351 NW_004955444 12343789 12350586 + 102013351 AGCD01039069;GBCE01054272;XR_262262;XR_262263 MODEL 8723581 protein-coding Sem1 SEM1 26S proteasome subunit ENCODES a protein that exhibits ubiquitin binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN integrator complex (ortholog); nucleus (ortholog); proteasome complex (ortholog) NW_004955432 13134359 13156402 - 102019940 AGCD01031004;AGCD01031005;GBDF01043233;XM_005388071;XM_005388072 XP_005388128;XP_005388129 MODEL 8958452 ncrna LOC102010160 uncharacterized LOC102010160 NW_004955481 5183643 5195662 + 102010160 AGCD01056965;GBDF01117312;XR_263780;XR_263781 MODEL 9001219 protein-coding Pjvk pejvakin INVOLVED IN detection of mechanical stimulus involved in sensory perception of sound (ortholog); pexophagy (ortholog); programmed cell death in response to reactive oxygen species (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 59 (ortholog); beta thalassemia (ortholog); FOUND IN ciliary rootlet (ortholog); cortical actin cytoskeleton (ortholog); cytoplasm (ortholog) NW_004955403 18386705 18393771 - 102027256 AGCD01002098;GBDJ01222619;XM_005373379 XP_005373436 MODEL 9021314 protein-coding Rarb retinoic acid receptor beta ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); heterocyclic compound binding (ortholog); nuclear receptor activity (ortholog); INVOLVED IN bone development (ortholog); embryonic digestive tract development (ortholog); embryonic eye morphogenesis (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); Anophthalmia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955430 17067536 17457558 + 102013109 AGCD01029649;AGCD01029650;AGCD01029651;AGCD01029652;AGCD01029653;AGCD01029654;AGCD01029655;AGCD01029656;AGCD01029657;GBDF01287994;XM_005387488 XP_005387545 MODEL 8796304 pseudo LOC102016394 YEATS domain-containing protein 4 pseudogene NW_004955423 524127 524634 - 102016394 AGCD01023414;XM_005385348 MODEL 8759634 protein-coding Sphkap SPHK1 interactor, AKAP domain containing ENCODES a protein that exhibits protein kinase A binding (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN mitochondrion (ortholog); Z disc (ortholog) NW_004955453 6530796 6701189 + 102005335 AGCD01044722;AGCD01044723;AGCD01044724;AGCD01044725;AGCD01044726;AGCD01044727;GBDK01147355;XM_005395434;XM_013519982;XM_013519983;XM_013519984;XM_013519985 XP_005395491;XP_013375436;XP_013375437;XP_013375438;XP_013375439 MODEL 8860728 protein-coding LOC102008590 protocadherin gamma-B7-like NW_004957438 6 1466 - 102008590 AGCD01080834;GBCB01007960;XM_005415231 XP_005415288 MODEL 9038065 protein-coding LOC102005611 bcl-2-like protein 13 NW_004955423 25019836 25046086 + 102005611 AGCD01024050;AGCD01024051;XM_013514366 XP_013369820 MODEL 8720941 ncrna LOC102005963 uncharacterized LOC102005963 NW_004955526 3269899 3285554 + 102005963 AGCD01069333;AGCD01069334;GBDI01352716;XR_001231967;XR_001231968;XR_264661 MODEL 10100650 pseudo LOC102003142 Ig heavy chain V-III region 23-like NW_004955487 14752 15297 - 102003142 AGCD01059204 MODEL 10380307 ncrna LOC106147473 uncharacterized LOC106147473 NW_004955566 1168632 1171220 + 106147473 AGCD01074356;XR_001232394 MODEL 9018986 protein-coding Epyc epiphycan INVOLVED IN articular cartilage development (ortholog); bone development (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955405 28182890 28212864 - 102018797 AGCD01005233;GBCE01000127;XM_005374447 XP_005374504 MODEL 8745653 protein-coding Phgdh phosphoglycerate dehydrogenase ENCODES a protein that exhibits phosphoglycerate dehydrogenase activity (ortholog); INVOLVED IN G1 to G0 transition (ortholog); glial cell development (ortholog); glycine metabolic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amino acid metabolic disorder (ortholog); benign neonatal seizures (ortholog); FOUND IN cytosol (ortholog) NW_004955435 22757473 22803123 + 102018019 AGCD01033520;GBDK01323915;XM_005389088 XP_005389145 MODEL 8701410 protein-coding Trappc5 trafficking protein particle complex subunit 5 FOUND IN TRAPP complex (ortholog) NW_004955563 1600027 1601685 - 102026581 AGCD01074153;GBBH01000859;XM_005413166;XM_005413167;XM_005413168;XM_013509161 XP_005413223;XP_005413224;XP_005413225;XP_013364615 MODEL 8884781 protein-coding Socs7 suppressor of cytokine signaling 7 ENCODES a protein that exhibits phosphorylation-dependent protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cerebral cortex radially oriented cell migration (ortholog); fat cell differentiation (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH lung squamous cell carcinoma (ortholog); ovarian carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955451 13567377 13595685 + 102017528 AGCD01043490;GBBH01037090;GBDF01007859;XM_013519430 XP_013374884 MODEL 8716185 protein-coding Polr2a RNA polymerase II subunit A ENCODES a protein that exhibits 5'-3' RNA polymerase activity (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to oxygen levels (ortholog); DNA-templated transcription termination (ortholog); positive regulation of RNA splicing (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955467 9423540 9447530 - 102011523 AGCD01051511;GBCQ01005514;XM_005399484 XP_005399541 MODEL 8917071 protein-coding Psenen presenilin enhancer, gamma-secretase subunit ENCODES a protein that exhibits endopeptidase activator activity (ortholog); enzyme binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid precursor protein metabolic process (ortholog); amyloid-beta formation (ortholog); PARTICIPATES IN Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); Familial Acne Inversa 2 (ortholog); Familial Hidradenitis Suppurativa (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); gamma-secretase complex (ortholog) NW_004955468 2805153 2806573 - 102023891 AGCD01051838;GBCE01000146;XM_005399975;XM_013522407 XP_005400032;XP_013377861 MODEL 8918126 protein-coding Lpar1 lysophosphatidic acid receptor 1 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); lysophosphatidic acid binding (ortholog); lysophosphatidic acid receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); bleb assembly (ortholog); cell chemotaxis (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cell surface (ortholog); dendritic shaft (ortholog); dendritic spine (ortholog) NW_004955419 16190109 16324702 + 102011447 AGCD01020107;AGCD01020108;AGCD01020109;AGCD01020110;GBDF01015037;XM_005382726;XM_005382727;XM_005382729;XM_013513299 XP_005382783;XP_005382784;XP_005382786;XP_013368753 MODEL 8704307 protein-coding Ptpn6 protein tyrosine phosphatase non-receptor type 6 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); cytokine receptor binding (ortholog); natural killer cell lectin-like receptor binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); CD27 signaling pathway (ortholog); cell differentiation (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH anogenital venereal wart (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); apical dendrite (ortholog); cell-cell junction (ortholog) NW_004955413 4525954 4547177 + 102009165 AGCD01013621;GBCQ01152113;XM_005378847;XM_005378848 XP_005378904;XP_005378905 MODEL 8979349 protein-coding Rnf123 ring finger protein 123 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein maturation (ortholog); protein polyubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); ubiquitin ligase complex (ortholog) NW_004955532 1595970 1622633 + 102016194 AGCD01070195;AGCD01070196;GBDF01187191;XM_005410209;XM_005410211 XP_005410266;XP_005410268 MODEL 730469448 snorna SNORD113 Small nucleolar RNA SNORD113/SNORD114 family 8801590 protein-coding Rhbdl3 rhomboid like 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955481 7233305 7276085 + 102024907 AGCD01057058;GBBH01210574;GBCE01043483;XM_005402817 XP_005402874 MODEL 39132934 snorna SNORD73 Small nucleolar RNA SNORD73 8745165 protein-coding Rcor2 REST corepressor 2 ENCODES a protein that exhibits enzyme binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955422 21102185 21111974 + 102025371 AGCD01023101;GBDF01277179;XM_005384656;XM_005384657;XM_013514350 XP_005384713;XP_005384714;XP_013369804 MODEL 9038430 protein-coding Tktl2 transketolase like 2 FOUND IN cytoplasm (ortholog) NW_004955403 41526329 41528591 + 102015167 AGCD01002723;GBDK01218247;XM_013515256 XP_013370710 MODEL 8857106 protein-coding LOC102019555 uncharacterized LOC102019555 NW_004955604 471855 512915 + 102019555 AGCD01076908;AGCD01076909;AGCD01076910;AGCD01076911;AGCD01076912;AGCD01076913;AGCD01076914;AGCD01076915;AGCD01076916;AGCD01076917;AGCD01076918;AGCD01076919;XM_005414874 XP_005414931 MODEL 8875785 protein-coding Slc37a2 solute carrier family 37 member 2 ENCODES a protein that exhibits glucose 6-phosphate:phosphate antiporter activity (ortholog); INVOLVED IN glucose-6-phosphate transport (ortholog); phosphate ion transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955412 26119121 26143728 + 102018483 AGCD01013185;GBCE01075926;XM_005378455;XM_013511237;XM_013511238 XP_005378512;XP_013366691;XP_013366692 MODEL 8873584 pseudo LOC102006312 uncharacterized LOC102006312 NW_004955454 13491911 13530089 - 102006312 AGCD01045438;AGCD01045439;AGCD01045440;AGCD01045441;AGCD01045442;AGCD01045443;AGCD01045444 MODEL 8782493 protein-coding Plk5 polo like kinase 5 (inactive) ENCODES a protein that exhibits kinase activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); defense response to tumor cell (ortholog); DNA damage response (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog) NW_004955495 6415172 6424445 - 102028985 AGCD01062081;GBDJ01030988;XM_005405960;XM_013505279;XM_013505280;XM_013505281;XM_013505282;XM_013505283;XM_013505284;XM_013505285;XM_013505286;XM_013505287;XM_013505288;XM_013505289;XM_013505290 XP_005406017;XP_013360733;XP_013360734;XP_013360735;XP_013360736;XP_013360737;XP_013360738;XP_013360739;XP_013360740;XP_013360741;XP_013360742;XP_013360743;XP_013360744 MODEL 8897814 protein-coding Srrm1 serine and arginine repetitive matrix 1 PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear matrix (ortholog); nuclear speck (ortholog) NW_004955452 4401089 4433986 + 102003721 AGCD01043981;GBDF01081884;XM_005394812;XM_005394813;XM_005394815;XM_005394816;XM_013519673 XP_005394869;XP_005394870;XP_005394872;XP_005394873;XP_013375127 MODEL 39132817 snorna SNORA63 Small nucleolar RNA SNORA63 8972326 pseudo LOC102012149 high mobility group protein B1-like NW_004958114 9 505 + 102012149 AGCD01081510 MODEL 8922016 protein-coding Rsl1d1 ribosomal L1 domain containing 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); INVOLVED IN regulation of apoptotic process (ortholog); regulation of cellular senescence (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN nucleolus (ortholog) NW_004955442 6749038 6764461 + 102025293 AGCD01037596;GBDF01080304;XM_005391158 XP_005391215 MODEL 39133575 snrna U2 U2 spliceosomal RNA 9038836 protein-coding LOC102004169 cell cycle control protein 50A NW_004955488 8014892 8049217 - 102004169 AGCD01059700;GBCB01006663;XM_013504427 XP_013359881 MODEL 8817328 ncrna LOC102011796 uncharacterized LOC102011796 NW_004955433 7192628 7234562 + 102011796 AGCD01031566;AGCD01031567;GBDF01254267;XR_001234703;XR_001234704;XR_261565 MODEL 8927359 ncrna LOC102010941 uncharacterized LOC102010941 NW_004955435 16643784 16657404 - 102010941 AGCD01033336;GBDF01056722;XR_261709 MODEL 15036847 trna Trnap-ggg transfer RNA proline (anticodon GGG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978807 8710259 protein-coding Prkra protein activator of interferon induced protein kinase EIF2AK2 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to oxidative stress (ortholog); ear development (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955403 18394609 18410381 + 102027598 AGCD01002099;GBDF01113358;GBDK01432396;XM_013512630 XP_013368084 MODEL 730469053 snorna SNORA40 Small nucleolar RNA SNORA40 8985510 protein-coding Wdr53 WD repeat domain 53 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955420 12694208 12714613 - 102013299 AGCD01020884;AGCD01020885;GBDI01358032;XM_005383136;XM_005383137;XM_005383138;XM_013513504 XP_005383193;XP_005383194;XP_005383195;XP_013368958 MODEL 8737569 pseudo LOC102010171 40S ribosomal protein SA pseudogene NW_004955421 22931886 22933055 - 102010171 AGCD01022164 MODEL 8746500 pseudo LOC102019886 centrosome and spindle pole-associated protein 1-like NW_004955406 12062313 12087255 + 102019886 AGCD01005906 MODEL 8968612 protein-coding Pkd1 polycystin 1, transient receptor potential channel interacting ENCODES a protein that exhibits calcium channel activity (ortholog); monoatomic cation channel activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN blood vessel development (ortholog); branching morphogenesis of an epithelial tube (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH anemia (ortholog); Animal Disease Models (ortholog); Ascites (ortholog); FOUND IN basolateral plasma membrane (ortholog); calcium channel complex (ortholog); cation channel complex (ortholog) NW_004955442 15132555 15178377 + 102007374 AGCD01037860;GBBH01090152;GBBH01090234;XM_013517656 XP_013373110 MODEL 8956572 ncrna LOC102011336 uncharacterized LOC102011336 NW_004955500 5251418 5257274 + 102011336 AGCD01063826;GBDJ01403986;XR_001231513;XR_264228 MODEL 8788375 pseudo LOC102007463 60S ribosomal protein L21 pseudogene NW_004955434 3733419 3736535 - 102007463 AGCD01032143 MODEL 8749902 protein-coding LOC102022437 uncharacterized LOC102022437 NW_004955570 295803 309942 - 102022437 AGCD01074720;AGCD01074721;AGCD01081655;GBDF01079306;XM_013509380 XP_013364834 MODEL 8985340 pseudo LOC102004912 wee1-like protein kinase 2 pseudogene NW_004955463 3267194 3269457 - 102004912 AGCD01049579 MODEL 9028273 protein-coding Sod1 superoxide dismutase 1 ENCODES a protein that exhibits copper ion binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN action potential initiation (ortholog); anterograde axonal transport (ortholog); auditory receptor cell stereocilium organization (ortholog); PARTICIPATES IN amyotrophic lateral sclerosis pathway; forkhead class A signaling pathway; hypertension pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute kidney failure (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955407 31261451 31267657 + 102014981 AGCD01007644;AGCD01007645;GBDF01011265;XM_013504103 XP_013359557 MODEL 730469513 snorna SNORA18 Small nucleolar RNA SNORA18 8823222 protein-coding LOC102008222 olfactory receptor 50-like NW_004955419 5484750 5485697 - 102008222 AGCD01019814;XM_005382529 XP_005382586 MODEL 9063938 pseudo LOC102018363 60S ribosomal protein L36 pseudogene NW_004955454 3467514 3481312 + 102018363 AGCD01045080;AGCD01045081;AGCD01045082 MODEL 8905111 pseudo LOC102013356 coiled-coil domain-containing protein 152-like NW_004955402 14247257 14248568 + 102013356 AGCD01000422 MODEL 8856077 protein-coding LOC102008978 putative HLA class I histocompatibility antigen, alpha chain H NW_004955437 59805 63404 - 102008978 AGCD01034100;GBBH01004597;XM_013516921;XM_013516922;XM_013516923;XM_013516924;XR_001235068;XR_001235069 XP_013372375;XP_013372376;XP_013372377;XP_013372378 MODEL 9036501 protein-coding Sema3a semaphorin 3A ENCODES a protein that exhibits chemorepellent activity (ortholog); neuropilin binding (ortholog); semaphorin receptor binding (ortholog); INVOLVED IN axon extension involved in axon guidance (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH amenorrhea (ortholog); Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN axon (ortholog); cerebellar climbing fiber to Purkinje cell synapse (ortholog); dendrite (ortholog) NW_004955410 2146088 2344342 + 102029719 AGCD01010629;GBDJ01165559;GBDK01233873;XM_005377190 XP_005377247 MODEL 8922303 protein-coding LOC102016398 melanoma-associated antigen 11-like NW_004955498 1977844 1978581 - 102016398 AGCD01062758;XM_013505522 XP_013360976 MODEL 730469064 snorna SNORA40 Small nucleolar RNA SNORA40 8997720 protein-coding Rhbg Rh family B glycoprotein ENCODES a protein that exhibits ammonium channel activity (ortholog); ankyrin binding (ortholog); carbon dioxide transmembrane transporter activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); transepithelial ammonium transport (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955545 2491417 2504013 + 102027116 AGCD01071906;AGCD01071907;GBCQ01000909;XM_005411675;XM_005411676;XM_013508364;XR_001232203 XP_005411732;XP_005411733;XP_013363818 MODEL 8971025 ncrna LOC102019556 uncharacterized LOC102019556 NW_004955403 15853903 15937454 - 102019556 AGCD01002055;AGCD01002056;GBDF01108949;XR_259174 MODEL 8762968 protein-coding Rcor3 REST corepressor 3 ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); transcription repressor complex (ortholog) NW_004955489 1016124 1059795 - 102014908 AGCD01059825;AGCD01059826;GBCB01020600;GBDF01155577;XM_013504486 XP_013359940 MODEL 39133504 snrna U4 U4 spliceosomal RNA 8753201 protein-coding Pllp plasmolipin ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN monoatomic ion transport (ortholog); myelin assembly (ortholog); myelination (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); schizophrenia (ortholog); FOUND IN apical plasma membrane (ortholog); compact myelin (ortholog); Golgi apparatus (ortholog) NW_004955433 14896087 14915794 - 102025039 AGCD01031731;AGCD01031732;GBBH01093584;XM_005388384 XP_005388441 MODEL 8981117 protein-coding Slc37a3 solute carrier family 37 member 3 ENCODES a protein that exhibits glucose 6-phosphate:phosphate antiporter activity (ortholog); xenobiotic transmembrane transporter activity (ortholog); INVOLVED IN glucose-6-phosphate transport (ortholog); phosphate ion transmembrane transport (ortholog); xenobiotic transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog) NW_004955494 2891415 2933067 + 102022095 AGCD01061455;GBDK01189500;XM_005405423;XM_013504991;XM_013504992 XP_005405480;XP_013360445;XP_013360446 MODEL 8883672 protein-coding LOC102005616 cytochrome P450 2C18-like NW_004955507 1041847 1146933 + 102005616 AGCD01065501;AGCD01065502;AGCD01065503;AGCD01065504;AGCD01065505;AGCD01065506;AGCD01065507;AGCD01065508;AGCD01065509;AGCD01065510;AGCD01065511;AGCD01065512;AGCD01065513;AGCD01065514;AGCD01065515;AGCD01065516;GBDF01111538;XM_013506232 XP_013361686 MODEL 10201637 ncrna LOC106147474 uncharacterized LOC106147474 NW_004955566 1517647 1519621 - 106147474 AGCD01074364;GBBH01073221;XR_001232395 MODEL 8775711 protein-coding Rpl14 ribosomal protein L14 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); ribosomal large subunit biogenesis (ortholog); rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Parkinson's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955420 29430757 29434669 - 102012332 AGCD01021500;AGCD01021501;GBCQ01003831;XM_005383578 XP_005383635 MODEL 9059429 protein-coding Ppp1r1c protein phosphatase 1 regulatory inhibitor subunit 1C ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955403 15219140 15340467 - 102018247 AGCD01002042;GBCQ01047452;XM_013515176 XP_013370630 MODEL 8891468 protein-coding Rsl24d1 ribosomal L24 domain containing 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955409 622561 632776 + 102011842 AGCD01009159;AGCD01009160;GBDI01018667;XM_005376610 XP_005376667 MODEL 8949353 ncrna LOC102011798 uncharacterized LOC102011798 NW_004955521 1606251 1622200 - 102011798 AGCD01068190;GBDF01280812;XR_001231893;XR_001231894 MODEL 9057000 pseudo LOC102010942 2-hydroxyacylsphingosine 1-beta-galactosyltransferase pseudogene NW_004955526 532505 539029 - 102010942 AGCD01069240 MODEL 9014866 protein-coding Polr2b RNA polymerase II subunit B ENCODES a protein that exhibits 5'-3' RNA polymerase activity (ortholog); chromatin binding (ortholog); DNA-directed RNA polymerase activity (ortholog); INVOLVED IN transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955447 14110182 14150556 - 102023209 AGCD01040979;AGCD01040980;AGCD01040981;AGCD01040982;AGCD01040983;AGCD01040984;AGCD01040985;GBBH01062307;XM_005392864;XM_013518517 XP_005392921;XP_013373971 MODEL 8899522 protein-coding Eqtn equatorin INVOLVED IN acrosomal vesicle exocytosis (ortholog); endocytosis (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN acrosomal membrane (ortholog); cytoplasm (ortholog); early endosome (ortholog) NW_004955472 7554243 7563620 + 102024109 AGCD01053624;GBDF01050220;XM_005401145 XP_005401202 MODEL 8749266 protein-coding Rnf125 ring finger protein 125 ENCODES a protein that exhibits p53 binding (ortholog); ubiquitin conjugating enzyme binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of RIG-I signaling pathway (ortholog); negative regulation of type I interferon production (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); VCP-NPL4-UFD1 AAA ATPase complex (ortholog) NW_004955402 19276157 19310605 + 102020734 AGCD01000554;AGCD01000555;AGCD01000556;AGCD01000557;AGCD01000558;GBDJ01276649;XM_005372751 XP_005372808 MODEL 8918424 protein-coding Rarg retinoic acid receptor gamma ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone development (ortholog); bone morphogenesis (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiotoxicity (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955458 480257 501172 - 102016349 AGCD01047129;AGCD01047130;GBCC01032927;XM_013520911;XM_013520912;XM_013520913;XM_013520914 XP_013376365;XP_013376366;XP_013376367;XP_013376368 MODEL 39132935 snorna SNORD73 Small nucleolar RNA SNORD73 8987272 protein-coding Spi1 Spi-1 proto-oncogene ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN anatomical structure regression (ortholog); apoptotic process involved in blood vessel morphogenesis (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN DNA modification pathway; interleukin-4 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); agammaglobulinemia (ortholog); agammaglobulinemia 10 (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 873735 886560 + 102022823 AGCD01022440;AGCD01022441;AGCD01022442;GBDK01006523;XM_005383976 XP_005384033 MODEL 8895955 protein-coding Tlcd1 TLC domain containing 1 INVOLVED IN membrane assembly (ortholog); phospholipid homeostasis (ortholog); plasma membrane organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955481 4429923 4433147 + 102022289 AGCD01056937;AGCD01056938;GBBH01123169;GBCQ01100660;XM_005402717 XP_005402774 MODEL 9051791 protein-coding LOC102006314 keratin-associated protein 20-2-like NW_004955407 30126888 30127076 + 102006314 AGCD01007628;XM_005375638 XP_005375695 MODEL 39132814 snorna SNORA63 Small nucleolar RNA SNORA63 8987458 protein-coding LOC102005965 cytochrome b-c1 complex subunit 1, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN mitochondrial electron transport, ubiquinol to cytochrome c (ortholog); response to activity (ortholog); response to alkaloid (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955532 685315 691286 - 102005965 AGCD01070144;GBDF01007354;XM_013507657 XP_013363111 MODEL 9041803 ncrna LOC102012150 uncharacterized LOC102012150 NW_004955403 54885558 54890045 - 102012150 AGCD01003107;GBDF01110602;XR_259275 MODEL 8856953 protein-coding Sgce sarcoglycan epsilon INVOLVED IN kidney development (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH genetic disease (ortholog); Muscle Hypotonia (ortholog); myoclonic dystonia (ortholog); FOUND IN dendrite membrane (ortholog); dystrophin-associated glycoprotein complex (ortholog); Golgi apparatus (ortholog) NW_004955432 11310488 11383803 - 102013326 AGCD01030945;AGCD01030946;AGCD01030947;GBDI01385644;XM_005388045;XM_005388047;XM_005388048;XM_005388049;XM_013516087;XM_013516088;XM_013516089 XP_005388102;XP_005388104;XP_005388105;XP_005388106;XP_013371541;XP_013371542;XP_013371543 MODEL 39133576 snrna U2 U2 spliceosomal RNA 8753437 pseudo LOC102011337 transcription elongation factor B polypeptide 1 pseudogene NW_004955502 352527 352808 - 102011337 AGCD01064237;XM_005406918 MODEL 39133505 snrna U4 U4 spliceosomal RNA 8881152 protein-coding LOC102008593 cholesterol 7-alpha-monooxygenase ENCODES a protein that exhibits 24S-hydroxycholesterol 7-alpha-hydroxylase activity (ortholog); cholesterol 7-alpha-monooxygenase activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); bile acid metabolic process (ortholog); cellular response to cholesterol (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; bile acid signaling pathway; cerebrotendinous xanthomatosis pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); autism spectrum disorder (ortholog); cholestasis (ortholog) NW_004955454 17035105 17078854 - 102008593 AGCD01045541;AGCD01045542;AGCD01045543;AGCD01045544;GBBH01001699;GBCQ01008759;XM_013520108 XP_013375562 MODEL 9006420 protein-coding Lpar2 lysophosphatidic acid receptor 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); positive regulation of MAPK cascade (ortholog); positive regulation of Rho protein signal transduction (ortholog); FOUND IN cell surface (ortholog); endocytic vesicle (ortholog); glutamatergic synapse (ortholog) NW_004955524 2390354 2395436 + 102015142 AGCD01068814;AGCD01068815;AGCD01068816;GBCQ01014829;XM_005409641 XP_005409698 MODEL 730469470 snorna SNORD113 Small nucleolar RNA SNORD113/SNORD114 family 8880799 protein-coding Ptpn7 protein tyrosine phosphatase non-receptor type 7 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955406 38233409 38249940 - 102022461 AGCD01006598;AGCD01006599;GBCE01150962;XM_005375204;XM_005375205;XM_005375206;XM_005375207;XM_013522339;XM_013522342;XM_013522343 XP_005375261;XP_005375262;XP_005375263;XP_005375264;XP_013377793;XP_013377796;XP_013377797 MODEL 9020528 protein-coding LOC102003148 RNA-binding protein FUS NW_004955493 8027419 8038171 + 102003148 AGCD01061257;GBDJ01020436;GBDK01016818;XM_013504880;XM_013504881 XP_013360334;XP_013360335 MODEL 126903052 snorna SNORA18 Small nucleolar RNA SNORA18 8923000 protein-coding Sod2 superoxide dismutase 2 ENCODES a protein that exhibits DNA binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure (ortholog); apoptotic mitochondrial changes (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN hypertension pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); acute kidney tubular necrosis (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) NW_004955439 21209101 21223538 + 102018438 AGCD01036146;AGCD01036147;AGCD01036148;GBBH01000815;XM_005390723 XP_005390780 MODEL 8809408 pseudo LOC102018364 lysophosphatidic acid receptor 1-like NW_004955454 3717699 3718824 - 102018364 AGCD01045095 MODEL 8851991 protein-coding Psip1 PC4 and SRSF1 interacting protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); supercoiled DNA binding (ortholog); INVOLVED IN mRNA 5'-splice site recognition (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); response to heat (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN euchromatin (ortholog); heterochromatin (ortholog); nuclear periphery (ortholog) NW_004955434 18312646 18357753 - 102020276 AGCD01032562;GBDI01055139;XM_005388709;XM_005388710 XP_005388766;XP_005388767 MODEL 8942875 protein-coding Wdr54 WD repeat domain 54 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); negative regulation of receptor internalization (ortholog); regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); vesicle (ortholog) NW_004955424 11358694 11362138 - 102003257 AGCD01024564;GBDK01237577;XM_005385517;XM_005385518;XM_005385519 XP_005385574;XP_005385575;XP_005385576 MODEL 8874823 pseudo LOC102016399 aldose reductase-related protein 2 pseudogene NW_004955424 1563 9210 + 102016399 AGCD01024164;AGCD01024165 MODEL 9063062 protein-coding Srrm2 serine/arginine repetitive matrix 2 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autosomal dominant intellectual developmental disorder 72 (ortholog); cervical cancer (ortholog); FOUND IN Cajal body (ortholog); catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog) NW_004955442 14478350 14498152 + 102014293 AGCD01037821;GBBH01000548;XM_005391396;XM_005391398;XM_013517820;XM_013517821;XM_013517822 XP_005391453;XP_005391455;XP_013373274;XP_013373275;XP_013373276 MODEL 8743577 protein-coding LOC102010175 sulfotransferase 1A1-like NW_004955493 6792319 6795493 - 102010175 AGCD01061139;AGCD01061140;GBCQ01097961;GBCQ01097964;XM_013504817 XP_013360271 MODEL 8885878 gene LOC102019887 immunoglobulin omega chain-like NW_004955455 6452637 6453149 + 102019887 AGCD01045796;XM_005396353 MODEL 8945576 protein-coding LOC102004170 olfactory receptor 6B1 NW_004955491 349180 350455 + 102004170 AGCD01060331;GBBH01225832;XM_005404722 XP_005404779 MODEL 8924495 pseudo LOC102007465 GPALPP motifs-containing protein 1 pseudogene NW_004955436 21483145 21488677 - 102007465 AGCD01034055 MODEL 8783834 pseudo LOC102022438 nucleolar protein of 40 kDa pseudogene NW_004955446 12790960 12791995 + 102022438 AGCD01040243 MODEL 8894395 ncrna LOC102004913 uncharacterized LOC102004913 NW_004955411 7852711 7855811 - 102004913 AGCD01011712;GBDF01042682;XR_259927 MODEL 8709998 protein-coding Prkrip1 PRKR interacting protein 1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN renal system process (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955456 15188211 15216267 - 102016022 AGCD01046663;AGCD01046664;GBDF01085713;XM_005396837 XP_005396894 MODEL 8777949 protein-coding Ppp1r2 protein phosphatase 1 regulatory inhibitor subunit 2 ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); FOUND IN dendritic spine (ortholog); growth cone (ortholog) NW_004955420 13592508 13613165 + 102024684 AGCD01020925;GBDI01077892;XM_005415381;XM_013513575 XP_005415438;XP_013369029 MODEL 9024007 pseudo LOC102008985 60S ribosomal protein L32 pseudogene NW_004955437 1108077 1108584 + 102008985 AGCD01034190 MODEL 8775375 protein-coding Eral1 Era like 12S mitochondrial rRNA chaperone 1 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); RNA folding chaperone (ortholog); rRNA binding (ortholog); INVOLVED IN mitochondrial small ribosomal subunit assembly (ortholog); ribosomal small subunit assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955481 4315139 4320983 - 102019803 AGCD01056933;AGCD01056934;GBCE01115661;XM_005402709;XM_013503383 XP_005402766;XP_013358837 MODEL 9037393 trna Trnap-ugg transfer RNA proline (anticodon UGG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955530;NW_004955449;NW_004955414;NW_004955442;NW_004955550 133690;1433235;15652077;14208532;1505328 133761;1433306;15652148;14208603;1505399 +;+;+;-;+ 101978808 AGCD01015187;AGCD01037806;AGCD01041800;AGCD01069830;AGCD01072578 MODEL 730469119 snorna SNORA40 Small nucleolar RNA SNORA40 8916884 protein-coding LOC102019558 myomesin-3-like NW_004956379 652 3958 + 102019558 AGCD01079511;GBCQ01120105;GBDK01103330;XM_005415199 XP_005415256 MODEL 8858971 protein-coding Sema3b semaphorin 3B ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Endometrial Neoplasms (ortholog) NW_004955532 2083457 2093327 + 102027567 AGCD01070215;GBDJ01266007;GBDK01001855;XM_013507584;XM_013507585;XM_013507586 XP_013363038;XP_013363039;XP_013363040 MODEL 8814966 protein-coding Rhce Rh blood group CcEe antigens INVOLVED IN ammonium transmembrane transport (ortholog); erythrocyte development (ortholog); multicellular organismal-level iron ion homeostasis (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); congenital hemolytic anemia (ortholog); hepatocellular carcinoma (ortholog); FOUND IN ankyrin-1 complex (ortholog); membrane (ortholog) NW_004955452 4912882 4956174 - 102007179 AGCD01044001;AGCD01044002;AGCD01044003;GBDF01248710;XM_005394822;XM_013519668 XP_005394879;XP_013375122 MODEL 39132811 snorna SNORA63 Small nucleolar RNA SNORA63 8916974 protein-coding Rcsd1 RCSD domain containing 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN cellular hyperosmotic response (ortholog); skeletal muscle contraction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955462 9321624 9383962 - 102022892 AGCD01049337;GBDI01185598;XM_005398223;XM_005398224;XM_013521437 XP_005398280;XP_005398281;XP_013376891 MODEL 8818596 protein-coding Pln phospholamban ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acrosome assembly (ortholog); adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); calcium ion transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); cardiomyopathy (ortholog); centronuclear myopathy (ortholog); FOUND IN calcium ion-transporting ATPase complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955436 1439098 1447070 + 102010626 AGCD01033577;GBDK01316951;XM_005389124 XP_005389181 MODEL 8785323 protein-coding Slc37a4 solute carrier family 37 member 4 ENCODES a protein that exhibits glucose 6-phosphate:phosphate antiporter activity (ortholog); glucose-6-phosphate transmembrane transporter activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); glucose-6-phosphate transport (ortholog); phosphate ion transmembrane transport (ortholog); PARTICIPATES IN electron transport chain pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH anemia (ortholog); cervical cancer (ortholog); congenital disorder of glycosylation type IIw (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955412 20133652 20140134 - 102022899 AGCD01012994;GBCQ01000749;XM_005378292;XM_013511130;XM_013511131;XM_013511132;XM_013511133;XM_013511134;XM_013511135 XP_005378349;XP_013366584;XP_013366585;XP_013366586;XP_013366587;XP_013366588;XP_013366589 MODEL 9004493 protein-coding Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting INVOLVED IN detection of nodal flow (ortholog); determination of left/right symmetry (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN calcium channel complex (ortholog); ciliary membrane (ortholog); cilium (ortholog) NW_004955456 5497126 5582342 + 102007085 AGCD01046333;AGCD01046334;AGCD01046335;AGCD01046336;AGCD01046337;AGCD01046338;GBCE01121174;XM_013520637 XP_013376091 MODEL 8700975 protein-coding LOC102005618 UPF0061 protein ETA_18310-like NW_004955429 2822671 2866918 + 102005618 AGCD01028439;AGCD01028440;AGCD01028441;AGCD01028442;AGCD01028443;GBBH01006669;GBCQ01067969;XM_005386894 XP_005386951 MODEL 39133577 snrna U2 U2 spliceosomal RNA 8828799 pseudo LOC102011339 actin filament-associated protein 1-like 2 pseudogene NW_004955503 4487948 4488394 + 102011339 AGCD01064669 MODEL 10279190 ncrna LOC106147475 uncharacterized LOC106147475 NW_004955566 1364512 1369326 - 106147475 AGCD01074358;GBCB01007922;XR_001232396 MODEL 8859322 protein-coding LOC102011799 uncharacterized LOC102011799 NW_004955524 3971442 3983883 + 102011799 AGCD01068941;GBDK01315273;XM_005409534;XM_013507300;XM_013507301 XP_005409591;XP_013362754;XP_013362755 MODEL 8853668 protein-coding Trappc6b trafficking protein particle complex subunit 6B ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog) NW_004955409 22117329 22131102 + 102015484 AGCD01010017;AGCD01010018;AGCD01010019;AGCD01010020;GBDF01086623;XM_005376885 XP_005376942 MODEL 9009520 pseudo LOC102008594 eukaryotic translation initiation factor 2A-like NW_004955406 5948906 5974852 + 102008594 AGCD01005744 MODEL 8865727 pseudo LOC102013359 cryptochrome-1-like NW_004955402 23388755 23392703 + 102013359 AGCD01000622 MODEL 9043790 protein-coding Rsph1 radial spoke head component 1 INVOLVED IN axoneme assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN 9+2 motile cilium (ortholog); chromosome (ortholog); condensed nuclear chromosome (ortholog) NW_004955407 39266888 39284972 + 102009802 AGCD01007824;GBDI01006193;XM_005375812;XM_005375813 XP_005375869;XP_005375870 MODEL 8986635 protein-coding Ptpn9 protein tyrosine phosphatase non-receptor type 9 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); positive regulation of protein localization to plasma membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); neuron projection terminus (ortholog) NW_004955450 2725755 2796390 + 102027249 AGCD01042400;AGCD01042401;AGCD01042402;AGCD01042403;AGCD01042404;AGCD01042405;AGCD01042406;AGCD01042407;GBCB01073974;GBDF01189354;XM_005393506 XP_005393563 MODEL 730468962 snorna SNORA18 Small nucleolar RNA SNORA18 730469196 snorna SNORD74 Small nucleolar RNA SNORD74 8886577 protein-coding Tlcd2 TLC domain containing 2 INVOLVED IN membrane assembly (ortholog); phospholipid homeostasis (ortholog); plasma membrane organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955481 1475748 1478447 + 102017659 AGCD01056833;GBDI01280068;XM_005402611 XP_005402668 MODEL 8881163 ncrna LOC102008595 uncharacterized LOC102008595 NW_004955455 5552047 5558107 + 102008595 AGCD01045738;GBDF01182597;XR_001236290;XR_001236291 MODEL 8786955 ncrna LOC102006319 uncharacterized LOC102006319 NW_004955460 7406510 7414067 - 102006319 AGCD01048481;XR_263037 MODEL 8792398 protein-coding C1qtnf6 C1q and TNF related 6 ENCODES a protein that exhibits identical protein binding (ortholog); pattern recognition receptor activity (ortholog); ASSOCIATED WITH middle cerebral artery infarction (ortholog); myocardial infarction (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); protein-containing complex (ortholog) NW_004955413 23661788 23669793 - 102008523 AGCD01014333;GBDK01025155;XM_013511301 XP_013366755 MODEL 8876699 protein-coding Spib Spi-B transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN immature B cell differentiation (ortholog); macrophage differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955559 705809 711407 - 102019209 AGCD01073609;GBBH01186641;XM_005412785;XM_005412786;XM_013509028;XM_013509029;XM_013509030 XP_005412842;XP_005412843;XP_013364482;XP_013364483;XP_013364484 MODEL 8778540 protein-coding Pskh1 protein serine kinase H1 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); heart development (ortholog); ASSOCIATED WITH melanoma (ortholog); Progressive Familial Intrahepatic Cholestasis 13 (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955484 8784128 8813669 - 102020248 AGCD01058396;AGCD01058397;GBDK01196210;XM_005403614 XP_005403671 MODEL 8832315 ncrna LOC102012151 uncharacterized LOC102012151 NW_004955452 12802984 12851810 - 102012151 AGCD01044366;AGCD01044367;GBDF01073900;XR_001236023;XR_001236024 MODEL 8755597 protein-coding Sgcg sarcoglycan gamma INVOLVED IN gene expression (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2C (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2D (ortholog); FOUND IN dystroglycan complex (ortholog); plasma membrane (ortholog); sarcoglycan complex (ortholog) NW_004955497 3592041 3702780 + 102013189 AGCD01062549;AGCD01062550;AGCD01062551;AGCD01062552;GBCB01003278;GBDI01356297;XM_005406371 XP_005406428 MODEL 8810462 protein-coding Rpl15 ribosomal protein L15 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); response to ethanol (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia 12 (ortholog); Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955430 15766465 15769239 + 102010719 AGCD01029614;GBDF01008119;XM_005387479;XM_013515664 XP_005387536;XP_013371118 MODEL 8756946 ncrna LOC102019889 uncharacterized LOC102019889 NW_004955458 3287100 3321509 - 102019889 AGCD01047291;AGCD01047292;AGCD01047293;GBDK01152885;XR_262967 MODEL 730469488 snorna SNORD113 Small nucleolar RNA SNORD113/SNORD114 family 8891143 pseudo LOC102008226 voltage-dependent anion-selective channel protein 1-like NW_004955419 25137127 25158946 + 102008226 AGCD01020373;AGCD01020374 MODEL 39133579 snrna U2 U2 spliceosomal RNA 8957970 protein-coding LOC102010953 olfactory receptor 5-like NW_004955567 192924 193868 - 102010953 AGCD01074386;XM_005413283 XP_005413340 MODEL 8772054 protein-coding Sod3 superoxide dismutase 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); superoxide dismutase activity (ortholog); INVOLVED IN acute inflammatory response (ortholog); blood vessel diameter maintenance (ortholog); nitric oxide metabolic process (ortholog); PARTICIPATES IN cardiovascular system disease pathway; diabetes mellitus pathway; ASSOCIATED WITH brain ischemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955480 257716 263149 - 102023262 AGCD01056580;AGCD01056581;GBBH01033040;GBCC01000175;XM_013503333 XP_013358787 MODEL 8731093 ncrna LOC102018365 uncharacterized LOC102018365 NW_004955455 1202031 1214877 + 102018365 AGCD01045571;GBDK01265078;XR_262808 MODEL 10347018 protein-coding Phgr1 proline, histidine and glycine rich 1 ASSOCIATED WITH cervical cancer (ortholog) NW_004955416 7277637 7280676 + 106148164 AGCD01016971;GBCQ01018450;XM_013512620 XP_013368074 MODEL 8862260 protein-coding Erap1 endoplasmic reticulum aminopeptidase 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); endopeptidase activity (ortholog); interleukin-6 receptor binding (ortholog); INVOLVED IN antigen processing and presentation of peptide antigen via MHC class I (ortholog); membrane protein ectodomain proteolysis (ortholog); positive regulation of angiogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ankylosing spondylitis (ortholog); Behcet's disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955418 15827560 15859720 + 102010260 AGCD01019112;AGCD01019113;GBCB01073859;GBCQ01099077;XM_013513048 XP_013368502 MODEL 8846315 pseudo LOC102005969 protein FAM204A pseudogene NW_004955438 15499120 15499834 + 102005969 AGCD01035370 MODEL 8787342 protein-coding Wdr55 WD repeat domain 55 INVOLVED IN rRNA processing (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955418 33237 37676 - 102025242 AGCD01018664;GBCQ01151900;XM_005382003 XP_005382060 MODEL 9039089 protein-coding Srrm3 serine/arginine repetitive matrix 3 INVOLVED IN negative regulation of glucagon secretion (ortholog); negative regulation of insulin secretion (ortholog); RNA splicing (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); stomach cancer (ortholog); uterine carcinosarcoma (ortholog) NW_004955456 14855387 14914315 + 102014214 AGCD01046654;AGCD01046655;AGCD01046656;GBDF01195367;XM_005396897 XP_005396954 MODEL 8823245 pseudo LOC102010184 olfactory receptor 5A1-like NW_004955511 3897218 3898125 - 102010184 AGCD01066481 MODEL 39132808 snorna SNORA63 Small nucleolar RNA SNORA63 8768877 ncrna LOC102004176 uncharacterized LOC102004176 NW_004955422 28216623 28220532 + 102004176 AGCD01023345;GBDF01261407;XR_260927 MODEL 9042263 protein-coding Polr2c RNA polymerase II subunit C INVOLVED IN transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Deafness (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955433 15096324 15104435 + 102028888 AGCD01031745;GBCE01074461;XM_005388397 XP_005388454 MODEL 39133342 snrna U4 U4 spliceosomal RNA 8931319 protein-coding Rhcg Rh family C glycoprotein ENCODES a protein that exhibits ammonium channel activity (ortholog); ankyrin binding (ortholog); carbon dioxide transmembrane transporter activity (ortholog); INVOLVED IN ammonium excretion (ortholog); ammonium transmembrane transport (ortholog); intracellular monoatomic ion homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Hypoaldosteronism (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955416 15639425 15657708 + 102028747 AGCD01017336;AGCD01017337;AGCD01017338;GBDI01026790;XM_005381554 XP_005381611 MODEL 8812317 protein-coding Rnf126 ring finger protein 126 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cytoplasm protein quality control by the ubiquitin-proteasome system (ortholog); negative regulation of epidermal growth factor receptor signaling pathway (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955495 7083952 7098442 + 102021569 AGCD01062117;AGCD01062118;GBDJ01126521;XM_005406028;XM_013505310 XP_005406085;XP_013360764 MODEL 8928433 protein-coding LOC102004915 tubulin alpha-1B chain-like NW_004955465 12912276 12919581 - 102004915 AGCD01050568;XM_013521782 XP_013377236 MODEL 8701884 pseudo LOC102022446 solute carrier family 25 member 46 pseudogene NW_004955402 17208998 17210219 + 102022446 AGCD01000500 MODEL 8757276 ncrna LOC102005620 uncharacterized LOC102005620 NW_004955430 3876763 3953407 + 102005620 AGCD01029230;AGCD01029231;AGCD01029232;AGCD01029233;AGCD01029234;AGCD01029235;AGCD01029236;AGCD01029237;AGCD01029238;AGCD01029239;GBDF01177758;XR_001234564;XR_261415 MODEL 8864182 protein-coding Ppp1r21 protein phosphatase 1 regulatory subunit 21 ENCODES a protein that exhibits mRNA binding (ortholog); protein-macromolecule adaptor activity (ortholog); RNA binding (ortholog); INVOLVED IN regulation of intracellular mRNA localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog) NW_004955441 15002126 15061967 + 102018988 AGCD01037238;AGCD01037239;AGCD01037240;AGCD01037241;GBDI01081035;XM_013517520 XP_013372974 MODEL 8795932 protein-coding Rarres1 retinoic acid receptor responder 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Familial Pancreatic Carcinoma (ortholog); follicular lymphoma (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog) NW_004955448 9437365 9466565 - 102027799 AGCD01041474;GBDJ01011329;XM_005393105;XM_005393106;XM_013518647;XM_013518648 XP_005393162;XP_005393163;XP_013374101;XP_013374102 MODEL 8837526 protein-coding Sgcz sarcoglycan zeta ASSOCIATED WITH amphetamine abuse (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog); sarcoglycan complex (ortholog) NW_004955463 2114115 3127633 + 102013394 AGCD01049539;AGCD01049540;AGCD01049541;AGCD01049542;AGCD01049543;AGCD01049544;AGCD01049545;AGCD01049546;AGCD01049547;AGCD01049548;AGCD01049549;AGCD01049550;AGCD01049551;AGCD01049552;AGCD01049553;AGCD01049554;AGCD01049555;AGCD01049556;AGCD01049557;AGCD01049558;AGCD01049559;AGCD01049560;AGCD01049561;AGCD01049562;AGCD01049563;AGCD01049564;AGCD01049565;AGCD01049566;AGCD01049567;AGCD01049568;AGCD01049569;AGCD01049570;AGCD01049571;AGCD01049572;AGCD01049573;AGCD01049574;AGCD01049575;AGCD01049576;AGCD01049577;GBDF01041307;XM_005398345 XP_005398402 MODEL 8909409 trna Trnaq-cug transfer RNA glutamine (anticodon CUG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978823 AGCD01042594;AGCD01050595;AGCD01050600;AGCD01050634;AGCD01051475;AGCD01074498 MODEL 9041243 ncrna LOC102016402 uncharacterized LOC102016402 NW_004955506 5201291 5204170 - 102016402 AGCD01065356;GBDI01314103;XR_264356 MODEL 730469049 snorna SNORD74 Small nucleolar RNA SNORD74 9030127 protein-coding LOC102019560 uncharacterized LOC102019560 NW_004955403 51588408 51613490 - 102019560 AGCD01002995;AGCD01002996;GBDF01277743;XM_013514373;XM_013514376;XM_013514377;XM_013514383;XM_013514388;XM_013514389 XP_013369827;XP_013369830;XP_013369831;XP_013369837;XP_013369842;XP_013369843 MODEL 9014292 protein-coding LOC102008596 keratin-associated protein 20-2-like NW_004955407 30188698 30188859 + 102008596 AGCD01007628;XM_005375645 XP_005375702 MODEL 8940695 ncrna LOC102007466 uncharacterized LOC102007466 NW_004955532 2166348 2168036 + 102007466 AGCD01070222;GBDF01088883;XR_264727 MODEL 8792186 protein-coding Spic Spi-C transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN blastocyst development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog) NW_004955405 36946481 36956472 + 102026598 AGCD01005431;GBDI01243516;XM_005374550 XP_005374607 MODEL 8777378 ncrna LOC102003152 uncharacterized LOC102003152 NW_004955495 7582405 7586650 + 102003152 AGCD01062154;XR_264168 MODEL 8982208 protein-coding Plod1 procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 ENCODES a protein that exhibits ferrous iron binding (ortholog); L-ascorbic acid binding (ortholog); peptide binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); collagen biosynthetic process (ortholog); epidermis development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Arachnodactyly (ortholog); FOUND IN catalytic complex (ortholog) NW_004955486 1967771 1990561 - 102003972 AGCD01058976;AGCD01058977;GBCB01022681;GBDJ01076519;XM_005403978 XP_005404035 MODEL 8838696 protein-coding Lpar3 lysophosphatidic acid receptor 3 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); phospholipid binding (ortholog); INVOLVED IN bleb assembly (ortholog); G protein-coupled receptor signaling pathway (ortholog); gene expression (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH colon adenocarcinoma (ortholog); Familial Prostate Cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axon (ortholog); plasma membrane (ortholog) NW_004955423 9063804 9133203 + 102028433 AGCD01023651;AGCD01023652;AGCD01023653;GBBH01077389;XM_005385152;XM_013514355 XP_005385209;XP_013369809 MODEL 8821070 protein-coding Rpl18 ribosomal protein L18 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Diamond-Blackfan anemia 18 (ortholog); Disease Progression (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955559 1929643 1933077 + 102008581 AGCD01073682;GBCE01000894;XM_005412947 XP_005413004 MODEL 39133343 snrna U4 U4 spliceosomal RNA 10230970 protein-coding LOC106147476 olfactory receptor 1G1-like NW_004955567 161744 180130 + 106147476 AGCD01074382;AGCD01074383;AGCD01074384;AGCD01074385;GBBH01156591;XM_013509221 XP_013364675 MODEL 8843135 pseudo LOC102013361 ras-related protein Rab-33B pseudogene NW_004955402 34608545 34611065 - 102013361 AGCD01000866 MODEL 8777601 pseudo LOC102008986 transcription elongation factor A N-terminal and central domain-containing protein-like NW_004955438 5285314 5286378 - 102008986 AGCD01035064 MODEL 730469122 snorna SNORA40 Small nucleolar RNA SNORA40 730469328 snorna SNORA18 Small nucleolar RNA SNORA18 8779601 protein-coding Rsph10b radial spoke head 10 homolog B ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cilium (ortholog); sperm flagellum (ortholog) NW_004955460 13791666 13840754 + 102024881 AGCD01048723;AGCD01048724;AGCD01048725;AGCD01048726;GBDJ01085522;XM_005397900;XM_013521161;XM_013521163 XP_005397957;XP_013376615;XP_013376617 MODEL 8971978 protein-coding LOC102022449 zinc finger protein 709-like NW_004955626 47966 58915 + 102022449 AGCD01077462;AGCD01077463;GBDF01184976;XM_013510163 XP_013365617 MODEL 39131539 protein-coding C1QTNF6 C1q and TNF related 6 8833008 protein-coding Slc38a1 solute carrier family 38 member 1 ENCODES a protein that exhibits alanine:sodium symporter activity (ortholog); amino acid:sodium symporter activity (ortholog); glycine:sodium symporter activity (ortholog); INVOLVED IN amino acid import (ortholog); female pregnancy (ortholog); L-alpha-amino acid transmembrane transport (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN axon (ortholog); basolateral plasma membrane (ortholog); external side of apical plasma membrane (ortholog) NW_004955500 5393211 5468827 - 102011887 AGCD01063837;AGCD01063838;AGCD01063839;AGCD01063840;GBCC01020975;XM_005406597;XM_013505700;XR_001231494 XP_005406654;XP_013361154 MODEL 10218927 protein-coding Rcvrn recoverin ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN phototransduction (ortholog); regulation of calcium ion transport (ortholog); visual perception (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; visual phototransduction pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); thymoma (ortholog); FOUND IN dendrite (ortholog); perikaryon (ortholog); photoreceptor inner segment (ortholog) NW_004955467 7220237 7236450 + 106146237 AGCD01051431;GBDK01129198;XM_013522133 XP_013377587 MODEL 8721452 ncrna LOC102022450 uncharacterized LOC102022450 NW_004955403 48110321 48128265 - 102022450 AGCD01002914;GBDK01024559;XR_001234474;XR_259248 MODEL 8935616 protein-coding LOC102005976 sialic acid-binding Ig-like lectin 10 NW_004955558 999418 1002833 + 102005976 AGCD01073409;AGCD01073410;GBDI01356195;GBDJ01063531;XM_013508839 XP_013364293 MODEL 730468998 snorna SNORD75 Small nucleolar RNA SNORD75 9050479 ncrna LOC102011343 uncharacterized LOC102011343 NW_004955507 2011410 2055347 - 102011343 AGCD01065577;AGCD01065578;GBDK01390619;XR_001231618;XR_264370 MODEL 39132805 snorna SNORA63 Small nucleolar RNA SNORA63 8869370 protein-coding LOC102006320 TERF1-interacting nuclear factor 2 NW_004955409 36120339 36165515 + 102006320 AGCD01010445;AGCD01010446;AGCD01010447;AGCD01010448;AGCD01010449;AGCD01010450;GBDF01003589;XM_005377026;XM_005377027;XM_013510401 XP_005377083;XP_005377084;XP_013365855 MODEL 8956478 pseudo LOC102007468 UMP-CMP kinase pseudogene NW_004955540 3132229 3136955 - 102007468 AGCD01071335 MODEL 730468983 snorna SNORD113 Small nucleolar RNA SNORD113/SNORD114 family 9013854 protein-coding Pkd1l2 polycystin-1-like protein 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955522 3877806 3963197 - 102004194 AGCD01068403;AGCD01068404;AGCD01068405;AGCD01068406;AGCD01068407;AGCD01068408;AGCD01068409;AGCD01068410;GBDI01369777;XM_005409357;XM_013507110 XP_005409414;XP_013362564 MODEL 8787836 protein-coding LOC102011800 arrestin domain-containing protein 2 NW_004955524 3316609 3321314 - 102011800 AGCD01068880;AGCD01068881;GBCB01002759;GBDI01131111;XM_013507270 XP_013362724 MODEL 39133473 snrna U2 U2 spliceosomal RNA 8825637 protein-coding LOC102008228 chemokine XC receptor 1-like NW_004955420 26003029 26017172 + 102008228 AGCD01021384;AGCD01021385;AGCD01021386;AGCD01021387;AGCD01021388;GBDK01289511;XM_013513345 XP_013368799 MODEL 8708001 ncrna LOC102018366 uncharacterized LOC102018366 NW_004955409 33777180 33840794 - 102018366 AGCD01010400;GBDF01249318;XR_259801 MODEL 8740820 protein-coding Sema3c semaphorin 3C ENCODES a protein that exhibits semaphorin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); blood vessel remodeling (ortholog); cardiac endothelial to mesenchymal transition (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Developmental Disabilities (ortholog); FOUND IN extracellular region (ortholog) NW_004955410 4795658 4953460 + 102004789 AGCD01010670;AGCD01010671;AGCD01010672;AGCD01010673;GBBH01102036;GBDF01276791;XM_005377197 XP_005377254 MODEL 8853797 protein-coding Sgf29 SAGA complex associated factor 29 ENCODES a protein that exhibits histone H3K36me3 reader activity (ortholog); histone H3K4me3 reader activity (ortholog); methylation-dependent protein binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle (ortholog); regulation of cell division (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN ATAC complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955493 6759426 6774796 + 102018505 AGCD01061137;GBCB01041570;XM_005405175;XM_005405176;XM_005405177 XP_005405232;XP_005405233;XP_005405234 MODEL 8949700 protein-coding Tlcd3a TLC domain containing 3A ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955481 2283620 2292100 + 102025791 AGCD01056873;GBBH01007264;GBDF01128173;XM_005402638;XM_013503379 XP_005402695;XP_013358833 MODEL 8998849 pseudo LOC102012152 UMP-CMP kinase-like NW_004955405 25714441 25715377 + 102012152 AGCD01005179 MODEL 8884513 protein-coding Pskh2 protein serine kinase H2 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); uterine carcinosarcoma (ortholog) NW_004955417 3750965 3765326 - 102009837 AGCD01017925;XM_013512698 XP_013368152 MODEL 9044648 ncrna LOC102019563 uncharacterized LOC102019563 NW_004955405 18550190 18557677 + 102019563 AGCD01005021;GBCE01080090;XR_259388 MODEL 8720613 protein-coding LOC102019891 olfactory receptor 6C2-like NW_004955458 2686793 2687737 - 102019891 AGCD01047240;XM_013520844 XP_013376298 MODEL 9008798 protein-coding Prkx protein kinase cAMP-dependent X-linked catalytic subunit ENCODES a protein that exhibits cAMP-dependent protein kinase activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell adhesion (ortholog); cell-substrate adhesion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955499 2167252 2227510 - 102013848 AGCD01063419;AGCD01063420;AGCD01063421;AGCD01063422;AGCD01063423;AGCD01063424;AGCD01063425;AGCD01063426;AGCD01063427;AGCD01063428;GBBH01002093;GBCQ01174628;XM_013505599 XP_013361053 MODEL 8949283 protein-coding LOC102004922 olfactory receptor 51V1-like NW_004955414 21049076 21057022 - 102004922 AGCD01015402;AGCD01015403;AGCD01015404;XM_005380491 XP_005380548 MODEL 8868523 protein-coding Sofu1 sperm-oocyte fusion factor 1 INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog) NW_004955494 688212 689634 - 102030644 AGCD01061383;GBCQ01060938;XM_005405379 XP_005405436 MODEL 9029748 protein-coding Rheb Ras homolog, mTORC1 binding ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); negative regulation of cold-induced thermogenesis (ortholog); positive regulation of oligodendrocyte differentiation (ortholog); PARTICIPATES IN mTOR signaling pathway; Rheb mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Drug Resistant Epilepsy (ortholog); epilepsy (ortholog); FOUND IN dendrite (ortholog); endomembrane system (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955491 5795040 5833897 - 102003454 AGCD01060503;AGCD01060504;AGCD01060505;GBBH01062052;XM_013504611 XP_013360065 MODEL 9020924 protein-coding Lpar5 lysophosphatidic acid receptor 5 INVOLVED IN behavioral response to pain (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH stomach cancer (ortholog) NW_004955413 4238312 4249869 - 102020230 AGCD01013604;GBDI01322578;XM_005378793;XM_005378794;XM_005378795;XM_005378796;XM_005378798;XM_005378799;XM_013511330;XM_013511331;XM_013511332;XM_013511333;XM_013511334;XM_013511336 XP_005378850;XP_005378851;XP_005378852;XP_005378853;XP_005378855;XP_005378856;XP_013366784;XP_013366785;XP_013366786;XP_013366787;XP_013366788;XP_013366790 MODEL 39133346 snrna U4 U4 spliceosomal RNA 8843660 protein-coding Rpl18a ribosomal protein L18a ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); response to antineoplastic agent (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) NW_004955524 3385056 3387743 - 102016630 AGCD01068892;AGCD01068893;GBDI01017803;XM_005409550 XP_005409607 MODEL 9017252 protein-coding Ptpra protein tyrosine phosphatase receptor type A ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); integrin-mediated signaling pathway (ortholog); modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); colorectal cancer (ortholog); gastric adenocarcinoma (ortholog); FOUND IN focal adhesion (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955415 13819934 13967068 + 102020110 AGCD01016269;AGCD01016270;AGCD01016271;AGCD01016272;AGCD01016273;AGCD01016274;AGCD01016275;AGCD01016276;AGCD01016277;AGCD01016278;GBCE01032562;XM_005380770;XM_005380771;XM_013512312;XM_013512313 XP_005380827;XP_005380828;XP_013367766;XP_013367767 MODEL 8764122 protein-coding Ppp1r26 protein phosphatase 1 regulatory subunit 26 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955513 4039819 4046482 + 102029316 AGCD01066914;GBCE01037443;XM_005408477;XM_005408478 XP_005408534;XP_005408535 MODEL 730469557 snorna SNORA18 Small nucleolar RNA SNORA18 9014562 trna Trnaq-uug transfer RNA glutamine (anticodon UUG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955465;NW_004955465;NW_004955451 757927;13819250;13329350;12259037 757998;13819321;13329421;12259108 +;+;-;- 101978822 AGCD01043382;AGCD01050600;AGCD01050626;AGCD01057629 MODEL 8716128 ncrna LOC102008990 uncharacterized LOC102008990 NW_004955549 117973 173721 + 102008990 AGCD01072419;GBDF01076042;XR_001232252;XR_264912 MODEL 8953739 ncrna LOC102016403 uncharacterized LOC102016403 NW_004955429 6520317 6531549 - 102016403 AGCD01028550;GBDF01278048;XR_001234524 MODEL 8962776 protein-coding Srrm4 serine/arginine repetitive matrix 4 ENCODES a protein that exhibits identical protein binding (ortholog); mRNA binding (ortholog); INVOLVED IN cell differentiation (ortholog); mRNA processing (ortholog); nervous system development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); Hearing Disorders (ortholog); FOUND IN nucleus (ortholog) NW_004955455 12318529 12473420 - 102018157 AGCD01046033;AGCD01046034;AGCD01046035;AGCD01046036;AGCD01046037;AGCD01046038;GBDI01308207;XM_013520452;XM_013520453 XP_013375906;XP_013375907 MODEL 8914578 protein-coding Phip pleckstrin homology domain interacting protein ENCODES a protein that exhibits histone reader activity (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Arnold-Chiari Malformation (ortholog); FOUND IN nucleus (ortholog) NW_004955502 6842149 6951791 - 102005615 AGCD01064422;AGCD01064423;AGCD01064424;AGCD01064425;AGCD01064426;GBDK01145970;XM_013505816 XP_013361270 MODEL 8733588 protein-coding LOC102010185 olfactory receptor 4D10-like NW_004955511 4000616 4001551 + 102010185 AGCD01066486;XM_005408269 XP_005408326 MODEL 8907958 protein-coding Wdr59 WD repeat domain 59 INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN GATOR2 complex (ortholog); lysosomal membrane (ortholog) NW_004955484 2576505 2668001 + 102024115 AGCD01058120;AGCD01058121;AGCD01058122;GBDF01195114;XM_005403454;XM_005403455 XP_005403511;XP_005403512 MODEL 8800117 protein-coding Polr2d RNA polymerase II subunit D INVOLVED IN transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955459 2687005 2696388 + 102022472 AGCD01047996;GBCE01096350;XM_005397575 XP_005397632 MODEL 9020712 protein-coding LOC102008598 keratin-associated protein 10-7-like NW_004955407 41534110 41537176 - 102008598 AGCD01007870;XM_013505446 XP_013360900 MODEL 8859033 protein-coding Sema3d semaphorin 3D ASSOCIATED WITH Breast Cancer, Familial (ortholog); childhood-onset asthma (ortholog); Hirschsprung's disease (ortholog) NW_004955410 1356787 1510394 + 102029055 AGCD01010614;AGCD01010615;AGCD01010616;GBBH01117384;GBDF01039923;XM_005377189 XP_005377246 MODEL 9047481 protein-coding Rd3 RD3 regulator of GUCY2D ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); INVOLVED IN protein transport (ortholog); retina development in camera-type eye (ortholog); visual perception (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); Leber congenital amaurosis (ortholog); FOUND IN cone photoreceptor outer segment (ortholog); cytoplasm (ortholog); endosome (ortholog) NW_004955489 896964 903855 + 102013728 AGCD01059820;GBDK01188607;XM_005404502 XP_005404559 MODEL 8962795 protein-coding Trappc8 trafficking protein particle complex subunit 8 INVOLVED IN collagen biosynthetic process (ortholog); Golgi organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN TRAPP complex (ortholog) NW_004955402 19130393 19223019 - 102019001 AGCD01000547;AGCD01000548;AGCD01000549;GBBH01193692;GBDK01235353;XM_005372745;XM_005372747;XR_001231969 XP_005372802;XP_005372804 MODEL 8899671 protein-coding LOC102003153 CD70 antigen-like NW_004955495 2876196 2880324 + 102003153 AGCD01061808;GBDF01041568;XM_013505052 XP_013360506 MODEL 8998695 protein-coding Slc38a10 solute carrier family 38 member 10 INVOLVED IN bone development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955506 1724426 1767582 + 102006935 AGCD01065273;GBBH01032038;XM_005407280;XM_005407281;XM_005407282;XM_005407283;XM_005407284;XM_005407285;XM_013506030 XP_005407337;XP_005407338;XP_005407339;XP_005407340;XP_005407341;XP_005407342;XP_013361484 MODEL 8998011 pseudo LOC102011352 transcriptional coactivator YAP1-like NW_004955431 1758354 1764850 + 102011352 AGCD01029917 MODEL 39132802 snorna SNORA63 Small nucleolar RNA SNORA63 8742958 protein-coding LOC102010954 leukocyte immunoglobulin-like receptor subfamily A member 5 NW_004955567 1373617 1378077 + 102010954 AGCD01074469;GBBH01148932;GBDK01175825;XM_013509300 XP_013364754 MODEL 8860006 ncrna LOC102007469 uncharacterized LOC102007469 NW_004955439 19369735 19412284 - 102007469 AGCD01036083;GBDF01112984;XR_001235205;XR_261997 MODEL 730469124 snorna SNORA40 Small nucleolar RNA SNORA40 8783146 protein-coding Eras ES cell expressed Ras NW_004955543 381756 383093 + 102026258 AGCD01071579;XM_005415247 XP_005415304 MODEL 10134223 protein-coding LOC106147477 olfactory receptor 10Q1-like NW_004955567 224383 226341 - 106147477 AGCD01074388;AGCD01074389;XM_013509222 XP_013364676 MODEL 8900618 protein-coding LOC102004177 olfactory receptor 4X2-like NW_004955422 274679 279123 - 102004177 AGCD01022402;GBCQ01019293;XM_005384933 XP_005384990 MODEL 9034210 protein-coding Rsph14 radial spoke head 14 homolog ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN radial spoke (ortholog) NW_004955455 7491693 7574257 - 102025655 AGCD01045859;AGCD01045860;AGCD01045861;GBCE01089469;XM_005396368 XP_005396425 MODEL 8915486 pseudo LOC102012157 signal peptidase complex catalytic subunit SEC11A pseudogene NW_004955406 365288 365823 - 102012157 AGCD01005615 MODEL 8947779 pseudo LOC102022451 ubiquitin-conjugating enzyme E2 D3 pseudogene NW_004955451 15454957 15455313 - 102022451 AGCD01043609 MODEL 730469343 snorna SNORD77 Small nucleolar RNA SNORD77 8845135 protein-coding Plod2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 ENCODES a protein that exhibits procollagen glucosyltransferase activity (ortholog); procollagen-lysine 5-dioxygenase activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); collagen biosynthetic process (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH Bone Neoplasms (ortholog); Breast Cancer, Familial (ortholog); Bruck syndrome (ortholog); FOUND IN cytoplasm (ortholog); rough endoplasmic reticulum membrane (ortholog) NW_004955474 11392163 11473918 + 102020659 AGCD01054622;AGCD01054623;AGCD01054624;GBDF01305945;GBDJ01137009;XM_005401440;XM_005401441 XP_005401497;XP_005401498 MODEL 8843354 pseudo LOC102019897 GTP-binding protein SAR1b pseudogene NW_004955465 4712734 4713289 - 102019897 AGCD01050414 MODEL 8927285 ncrna LOC102006322 uncharacterized LOC102006322 NW_004955463 8147644 8156564 - 102006322 AGCD01049756;GBDF01286788;XR_263161 MODEL 8953516 pseudo LOC102008599 ATP synthase F(0) complex subunit C2, mitochondrial pseudogene NW_004955408 4475183 4478730 - 102008599 AGCD01008113 MODEL 8995786 ncrna LOC102013362 uncharacterized LOC102013362 NW_004955402 58255556 58259494 - 102013362 AGCD01001528;AGCD01001529;GBDF01117366;XR_259109 MODEL 8748236 pseudo LOC102011808 THO complex subunit 5 homolog pseudogene NW_004955540 390461 391906 + 102011808 AGCD01071274 MODEL 9046892 protein-coding Rarres2 retinoic acid receptor responder 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cellular response to insulin stimulus (ortholog); embryonic digestive tract development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); essential hypertension (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); G protein-coupled receptor complex (ortholog) NW_004955491 4954809 4957724 - 102020453 AGCD01060465;GBDF01126597;XM_005404775;XM_005404776;XM_005404777;XM_005404778 XP_005404832;XP_005404833;XP_005404834;XP_005404835 MODEL 39133475 snrna U2 U2 spliceosomal RNA 8926149 protein-coding LOC102008229 vomeronasal type-1 receptor 48-like NW_004955421 21911814 21912737 + 102008229 AGCD01022124;XM_005383932 XP_005383989 MODEL 8742333 protein-coding C1qtnf7 C1q and TNF related 7 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Hypoxia (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955480 8546222 8644361 - 102018493 AGCD01056729;AGCD01056730;GBDJ01388679;XM_005402531;XM_005402532;XM_005402533 XP_005402588;XP_005402589;XP_005402590 MODEL 9019223 trna Trnar-acg transfer RNA arginine (anticodon ACG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978835 AGCD01010511;AGCD01021398;AGCD01039089;AGCD01050591;AGCD01050597;AGCD01057606;AGCD01057629 MODEL 730469127 snorna SNORA40 Small nucleolar RNA SNORA40 9050885 protein-coding Spice1 spindle and centriole associated protein 1 INVOLVED IN metaphase chromosome alignment (ortholog); mitotic spindle assembly (ortholog); regulation of centriole replication (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955427 13584841 13626656 - 102003893 AGCD01027253;GBDK01324651;XM_005386399;XM_013515113;XM_013515114 XP_005386456;XP_013370567;XP_013370568 MODEL 730469552 snorna SNORA18 Small nucleolar RNA SNORA18 9018123 protein-coding Srrm5 serine/arginine repetitive matrix 5 NW_004955555 1347060 1349370 + 102013882 AGCD01073074;GBDF01002869;XM_005412528 XP_005412585 MODEL 8976850 ncrna LOC102008991 uncharacterized LOC102008991 NW_004955551 215613 228844 - 102008991 AGCD01072651;GBDF01122997;XR_001232270;XR_001232271;XR_001232272;XR_001232273 MODEL 8820165 protein-coding LOC102004182 zinc finger protein 14-like NW_004955499 330410 425895 + 102004182 AGCD01063220;AGCD01063221;AGCD01063222;AGCD01063223;AGCD01063224;AGCD01063225;AGCD01063226;AGCD01063227;AGCD01063228;AGCD01063229;AGCD01063230;AGCD01063231;GBCB01041247;XM_005406502;XM_013505562 XP_005406559;XP_013361016 MODEL 8870678 protein-coding Psma1 proteasome 20S subunit alpha 1 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); structural constituent of proteasome (ortholog); INVOLVED IN negative regulation of inflammatory response to antigenic stimulus (ortholog); proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955414 29667417 29679510 - 102023463 AGCD01015711;GBCB01002979;XM_005380332 XP_005380389 MODEL 8913441 protein-coding Prl prolactin INVOLVED IN cellular response to ethanol (ortholog); cellular response to hormone stimulus (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); adenoma (ortholog); alcohol dependence (ortholog); FOUND IN extracellular region (ortholog); secretory granule (ortholog) NW_004955483 4495257 4503377 + 102014360 AGCD01057742;GBCE01142445;XM_005403379 XP_005403436 MODEL 8918534 protein-coding LOC102019567 zinc finger protein 85-like NW_004955454 7180326 7196465 + 102019567 AGCD01045284;AGCD01045285;AGCD01045286;GBDI01206872;XM_013520198 XP_013375652 MODEL 8753009 protein-coding Sema3e semaphorin 3E ENCODES a protein that exhibits receptor ligand activity (ortholog); semaphorin receptor binding (ortholog); INVOLVED IN branching involved in blood vessel morphogenesis (ortholog); gonadotrophin-releasing hormone neuronal migration to the hypothalamus (ortholog); negative regulation of angiogenesis (ortholog); ASSOCIATED WITH amenorrhea (ortholog); CHARGE syndrome (ortholog); colitis (ortholog) NW_004955410 2732983 2831220 + 102013591 AGCD01010635;GBBH01036865;GBDI01386388;XM_013510666 XP_013366120 MODEL 8806570 ncrna LOC102011354 uncharacterized LOC102011354 NW_004955432 10743652 10745702 - 102011354 AGCD01030936;GBDF01250417;XR_261523 MODEL 8777115 protein-coding Pkd2 polycystin 2, transient receptor potential cation channel ENCODES a protein that exhibits actinin binding (ortholog); alpha-actinin binding (ortholog); ATPase binding (ortholog); INVOLVED IN aorta development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); autistic disorder (ortholog); FOUND IN basal cortex (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955474 1831221 1868170 - 102012637 AGCD01054268;GBBH01000984;GBCE01095892;XM_013502757 XP_013358211 MODEL 8877429 protein-coding Sohlh1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell differentiation (ortholog); oocyte differentiation (ortholog); oogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hereditary breast ovarian cancer syndrome (ortholog); hypogonadism (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955513 4767591 4771654 + 102020830 AGCD01066939;GBDF01225167;XM_005408545 XP_005408602 MODEL 8956642 protein-coding Slc38a11 solute carrier family 38 member 11 ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955449 9126231 9176698 + 102014098 AGCD01042037;GBDK01335030;XM_005393302;XM_005393303 XP_005393359;XP_005393360 MODEL 8831491 protein-coding Lpar6 lysophosphatidic acid receptor 6 INVOLVED IN blastocyst hatching (ortholog); ASSOCIATED WITH hypotrichosis (ortholog); hypotrichosis 1 (ortholog); hypotrichosis 8 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955431 2077093 2079000 - 102015753 AGCD01029922;GBCE01169968;XM_005387556 XP_005387613 MODEL 39133347 snrna U4 U4 spliceosomal RNA 9025322 protein-coding Rhebl1 RHEB like 1 ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); TOR signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955500 7894686 7898035 - 102014584 AGCD01063955;GBDF01077128;XM_005406691 XP_005406748 MODEL 8939030 protein-coding Rnf128 ring finger protein 128 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of cytokine production (ortholog); regulation of protein stability (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); Laterality Defects, Autosomal Dominant (ortholog); neutropenia (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955490 9288482 9309571 - 102023044 AGCD01060307;GBDJ01387080;GBDJ01387081;XM_005404712 XP_005404769 MODEL 8904770 protein-coding Rpl19 ribosomal protein L19 ENCODES a protein that exhibits 5.8S rRNA binding (ortholog); large ribosomal subunit rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955451 14062058 14066664 + 102024412 AGCD01043528;AGCD01043529;GBCQ01011540;XM_005394299 XP_005394356 MODEL 9044251 protein-coding LOC102005977 interleukin-6-like NW_004955443 14546872 14547379 + 102005977 AGCD01038517;XM_005392049 XP_005392106 MODEL 8875705 protein-coding LOC102016406 olfactory receptor 8H1-like NW_004955511 1232068 1233015 + 102016406 AGCD01066360;XM_005408227 XP_005408284 MODEL 8789629 protein-coding Erbb2 erb-b2 receptor tyrosine kinase 2 ENCODES a protein that exhibits coreceptor activity (ortholog); ErbB-3 class receptor binding (ortholog); growth factor binding (ortholog); INVOLVED IN axon regeneration (ortholog); cell population proliferation (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); PARTICIPATES IN altered epidermal growth factor/neuregulin signaling pathway; endometrial cancer pathway; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); amblyopia (ortholog); FOUND IN cell projection; apical plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955451 14442816 14456009 + 102029927 AGCD01043554;GBDF01303586;XM_005394319 XP_005394376 MODEL 8855751 protein-coding Ppp1r27 protein phosphatase 1 regulatory subunit 27 ENCODES a protein that exhibits phosphatase binding (ortholog); ASSOCIATED WITH thymoma (ortholog) NW_004955506 1327073 1328187 + 102026238 AGCD01065256;GBCB01002479;XM_005407253;XM_005407254 XP_005407310;XP_005407311 MODEL 8833379 protein-coding Sema3f semaphorin 3F ENCODES a protein that exhibits chemorepellent activity (ortholog); INVOLVED IN axon extension involved in axon guidance (ortholog); axon guidance (ortholog); branchiomotor neuron axon guidance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN glutamatergic synapse (ortholog) NW_004955532 1992417 2015879 + 102025393 AGCD01070209;GBCE01029838;XM_013507643;XM_013507644 XP_013363097;XP_013363098 MODEL 9011629 protein-coding LOC102005621 olfactory receptor 5B3-like NW_004955511 3197583 3200113 - 102005621 AGCD01066448;XM_013506384 XP_013361838 MODEL 8820372 pseudo LOC102010186 disks large-associated protein 5 pseudogene NW_004955430 21698565 21699103 + 102010186 AGCD01029774 MODEL 626189140 snorna SNORD113 Small nucleolar RNA SNORD113/SNORD114 family 8766112 pseudo LOC102003158 zinc transporter ZIP6 pseudogene NW_004955426 25050512 25052806 + 102003158 AGCD01026701 MODEL 8792663 protein-coding Trappc9 trafficking protein particle complex subunit 9 INVOLVED IN cerebral cortex development (ortholog); neuron differentiation (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnoid Cysts (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); Golgi apparatus (ortholog) NW_004955461 13498088 14130159 - 102022477 AGCD01049041;AGCD01049042;AGCD01049043;AGCD01049044;AGCD01049045;AGCD01049046;GBCB01060669;XM_013521331;XM_013521332;XM_013521333;XM_013521334;XM_013521335 XP_013376785;XP_013376786;XP_013376787;XP_013376788;XP_013376789 MODEL 8759618 protein-coding LOC102004923 spindle pole body component 110-like NW_004955415 787950 980102 + 102004923 AGCD01015854;AGCD01015855;AGCD01015856;GBDF01123992;XM_005380548;XM_005380549;XM_013512192;XM_013512193;XM_013512194;XM_013512195;XR_260257 XP_005380605;XP_005380606;XP_013367646;XP_013367647;XP_013367648;XP_013367649 MODEL 8730327 pseudo LOC102019899 ubiquitin-conjugating enzyme E2 variant 2 pseudogene NW_004955466 7207165 7207589 - 102019899 AGCD01050945 MODEL 8905245 protein-coding Sgip1 SH3GL interacting endocytic adaptor 1 ENCODES a protein that exhibits microtubule binding (ortholog); phospholipid binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN energy homeostasis (ortholog); plasma membrane tubulation (ortholog); positive regulation of eating behavior (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); intellectual disability (ortholog); FOUND IN AP-2 adaptor complex (ortholog); clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog) NW_004955423 24155401 24353166 - 102019712 AGCD01024031;AGCD01024032;AGCD01024033;AGCD01024034;AGCD01024035;GBDK01397860;XM_013514516;XM_013514517;XM_013514518;XM_013514519;XM_013514520 XP_013369970;XP_013369971;XP_013369972;XP_013369973;XP_013369974 MODEL 39132820 snorna SNORA63 Small nucleolar RNA SNORA63 9014710 ncrna LOC102010958 uncharacterized LOC102010958 NW_004955402 5775147 5790716 - 102010958 AGCD01000140;AGCD01000141;GBDI01357888;XR_259032 MODEL 8891459 ncrna LOC102011810 uncharacterized LOC102011810 NW_004955440 4672850 4697012 - 102011810 AGCD01036266;GBDF01015047;XR_262004 MODEL 8838403 protein-coding LOC102018376 apolipoprotein L2-like NW_004955413 22780940 22803083 - 102018376 AGCD01014317;GBDJ01239605;XM_013511518 XP_013366972 MODEL 8888168 protein-coding LOC102013363 ubiquinol-cytochrome-c reductase complex assembly factor 3 ENCODES a protein that exhibits cardiolipin binding (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN cristae formation (ortholog); mitochondrial electron transport, ubiquinol to cytochrome c (ortholog); mitochondrial respiratory chain complex III assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 9 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955599 540598 541643 - 102013363 AGCD01076657;GBCE01052198;XM_005414784 XP_005414841 MODEL 9036877 pseudo LOC102008236 tubulin alpha-1C chain-like NW_004955495 3000619 3002493 - 102008236 AGCD01061814 MODEL 8958963 protein-coding Ptprb protein tyrosine phosphatase receptor type B ENCODES a protein that exhibits cadherin binding (ortholog); protein tyrosine phosphatase activity (ortholog); transmembrane receptor protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN angiogenesis (ortholog); glial cell migration (ortholog); osteoblast differentiation (ortholog); ASSOCIATED WITH angiosarcoma (ortholog); brain glioma (ortholog); breast angiosarcoma (ortholog); FOUND IN signaling receptor complex (ortholog) NW_004955405 10647777 10766909 - 102028492 AGCD01004816;AGCD01004817;AGCD01004818;AGCD01004819;AGCD01004820;AGCD01004821;AGCD01004822;GBDK01004065;XM_005374311;XM_005374312 XP_005374368;XP_005374369 MODEL 8875475 protein-coding Wdr5b WD repeat domain 5B FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955427 21698766 21700390 - 102010390 AGCD01027454;GBCE01034152;XM_005386511 XP_005386568 MODEL 730469118 snorna SNORD77 Small nucleolar RNA SNORD77 8961898 protein-coding Srrt serrate, RNA effector molecule ENCODES a protein that exhibits DNA binding (ortholog); mRNA cap binding complex binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN neuronal stem cell population maintenance (ortholog); positive regulation of neurogenesis (ortholog); primary miRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); protein-containing complex (ortholog) NW_004955573 86975 101538 - 102010646 AGCD01074961;GBBH01060953;XM_005413680;XM_005413681;XM_013509452 XP_005413737;XP_005413738;XP_013364906 MODEL 8955615 pseudo LOC102003162 cyclin-dependent kinase 11B pseudogene NW_004955428 12919987 12929693 + 102003162 AGCD01027939;XM_005386732 MODEL 8747472 protein-coding LOC102006323 testis-specific Y-encoded-like protein 1 NW_004955464 13241650 13244996 - 102006323 AGCD01050265;XM_013521580 XP_013377034 MODEL 10127670 pseudo LOC106147478 leukocyte immunoglobulin-like receptor subfamily A member 5 NW_004955567 1251305 1263909 - 106147478 AGCD01074465 MODEL 8896374 protein-coding LOC102007471 very-long-chain 3-oxoacyl-CoA reductase-B-like NW_004955555 2234031 2248419 + 102007471 AGCD01073138;AGCD01073139;AGCD01073140;GBDF01155567;XM_005412503 XP_005412560 MODEL 8825850 protein-coding Phka1 phosphorylase kinase regulatory subunit alpha 1 INVOLVED IN glycogen catabolic process (ortholog); positive regulation of glycogen catabolic process (ortholog); protein autophosphorylation (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN phosphorylase kinase complex (ortholog) NW_004955475 12020278 12172427 - 102014774 AGCD01055177;AGCD01055178;AGCD01055179;AGCD01055180;AGCD01055181;AGCD01055182;AGCD01055183;GBCB01004235;XM_005401691;XM_005401692;XM_005401695;XM_005401696;XM_013502821 XP_005401748;XP_005401749;XP_005401752;XP_005401753;XP_013358275 MODEL 8837795 protein-coding Tlcd3b TLC domain containing 3B ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); negative regulation of fat cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cone-rod dystrophy 22 (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955493 6929477 6940109 + 102024921 AGCD01061148;AGCD01061149;GBDF01049970;XM_005405196;XM_005405197;XM_005405198;XM_005405199 XP_005405253;XP_005405254;XP_005405255;XP_005405256 MODEL 39133348 snrna U4 U4 spliceosomal RNA 8838809 trna Trnar-ccg transfer RNA arginine (anticodon CCG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004957365;NW_004955442;NW_004955465 7;14214277;13880906 79;14214349;13880978 +;-;+ 101978836 AGCD01037806;AGCD01050633;AGCD01080761 MODEL 8783559 ncrna LOC102012158 uncharacterized LOC102012158 NW_004955407 18483756 18702374 - 102012158 AGCD01007271;AGCD01007272;AGCD01007273;AGCD01007274;AGCD01007275;GBDF01046486;XR_001231621;XR_001231624;XR_001231625;XR_001231626;XR_001231627;XR_001231628;XR_259571 MODEL 8889169 protein-coding Spidr scaffold protein involved in DNA repair INVOLVED IN cellular response to camptothecin (ortholog); cellular response to hydroxyurea (ortholog); cellular response to ionizing radiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear chromosome (ortholog); nucleoplasm (ortholog); Shu complex (ortholog) NW_004955454 7360144 7710077 + 102021091 AGCD01045298;AGCD01045299;AGCD01045300;AGCD01045301;AGCD01045302;GBDF01249752;XM_005396031;XM_005396032;XM_013520203;XM_013520205 XP_005396088;XP_005396089;XP_013375657;XP_013375659 MODEL 9056307 protein-coding Ppp1r35 protein phosphatase 1 regulatory subunit 35 INVOLVED IN notochord morphogenesis (ortholog); positive regulation of centriole elongation (ortholog); positive regulation of cilium assembly (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) NW_004955573 523512 524979 + 102010428 AGCD01074988;AGCD01074989;GBBH01065691;GBDF01134060;XM_013509474 XP_013364928 MODEL 8925102 protein-coding Rd3l RD3 like NW_004955538 2678458 2680078 - 102020161 AGCD01071136;GBDF01108545;XM_005410817 XP_005410874 MODEL 10076501 protein-coding C1qtnf8 C1q and TNF related 8 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN positive regulation of cell motility (ortholog); ASSOCIATED WITH uveal melanoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955442 16159901 16162152 + 106149289 AGCD01037893;XM_013517653 XP_013373107 MODEL 8743330 protein-coding Erbb3 erb-b2 receptor tyrosine kinase 3 ENCODES a protein that exhibits ErbB-3 class receptor binding (ortholog); growth factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH amblyopia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN apical part of cell; apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955458 3683126 3701752 + 102028937 AGCD01047336;AGCD01047337;GBBH01093140;GBDJ01015857;XM_005397284 XP_005397341 MODEL 8992308 ncrna LOC102005624 uncharacterized LOC102005624 NW_004955518 1052939 1058556 - 102005624 AGCD01067755;GBDF01055606;XR_001231850;XR_264561;XR_264562 MODEL 8702851 protein-coding LOC102004199 trace amine-associated receptor 9 NW_004955436 13004804 13005842 + 102004199 AGCD01033849;XM_005415376 XP_005415433 MODEL 8898603 protein-coding Plod3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 ENCODES a protein that exhibits iron ion binding (ortholog); metal ion binding (ortholog); procollagen galactosyltransferase activity (ortholog); INVOLVED IN basement membrane assembly (ortholog); cellular response to hormone stimulus (ortholog); collagen biosynthetic process (ortholog); ASSOCIATED WITH BCARD syndrome (ortholog); Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955456 16082424 16090773 + 102023777 AGCD01046689;GBDF01156007;XM_005396861;XM_005396862 XP_005396918;XP_005396919 MODEL 8705053 protein-coding Prlh prolactin releasing hormone ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); prolactin-releasing peptide receptor binding (ortholog); INVOLVED IN autonomic nervous system development (ortholog); eating behavior (ortholog); energy reserve metabolic process (ortholog); PARTICIPATES IN obesity pathway; ASSOCIATED WITH obesity (ortholog); FOUND IN cytoplasm (ortholog) NW_004955542 2765578 2768057 - 102008030 AGCD01071537;GBDK01287743;XM_005411227 XP_005411284 MODEL 8907281 ncrna LOC102019901 uncharacterized LOC102019901 NW_004955468 1148115 1152636 + 102019901 AGCD01051758;GBDF01109347;XR_001236910;XR_001236911 MODEL 8891478 protein-coding Rars1 arginyl-tRNA synthetase 1 ENCODES a protein that exhibits arginine binding (ortholog); arginine-tRNA ligase activity (ortholog); ATP binding (ortholog); INVOLVED IN arginyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955408 21536426 21574683 + 102011958 AGCD01008554;AGCD01008555;GBDI01169815;XM_005376302 XP_005376359 MODEL 39133476 snrna U2 U2 spliceosomal RNA 9037605 protein-coding LOC102011357 death-inducer obliterator 1-like NW_004955528 1209085 1240649 + 102011357 AGCD01069553;AGCD01069554;AGCD01069555;AGCD01069556;GBDF01089866;XM_013507433 XP_013362887 MODEL 9049353 protein-coding Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel ENCODES a protein that exhibits alpha-actinin binding (ortholog); calcium channel activity (ortholog); calcium ion binding (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to pH (ortholog); detection of chemical stimulus involved in sensory perception of sour taste (ortholog); ASSOCIATED WITH lung cancer (ortholog); prostate cancer (ortholog); uterine carcinosarcoma (ortholog); FOUND IN calcium channel complex (ortholog); cation channel complex (ortholog); cell surface (ortholog) NW_004955507 6145981 6167152 - 102022313 AGCD01065697;GBDI01264560;XM_005407691;XM_005407692;XM_005407693;XM_005407694;XM_005407695;XM_005407696 XP_005407748;XP_005407749;XP_005407750;XP_005407751;XP_005407752;XP_005407753 MODEL 8716803 protein-coding Slc38a12 solute carrier family 38 member 12 ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955553 1664464 1726965 + 102014614 AGCD01072893;AGCD01072894;AGCD01072895;AGCD01072896;AGCD01072897;GBDF01039977;XM_005412255;XM_005412256;XM_013508654;XM_013508655 XP_005412312;XP_005412313;XP_013364108;XP_013364109 MODEL 8902864 protein-coding LOC102008603 forkhead box protein L1 NW_004955460 8202937 8204916 + 102008603 AGCD01048513;GBDF01028920;XM_005397773 XP_005397830 MODEL 9005016 protein-coding Lpcat1 lysophosphatidylcholine acyltransferase 1 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); 1-alkylglycerophosphocholine O-acetyltransferase activity (ortholog); INVOLVED IN negative regulation of phosphatidylcholine biosynthetic process (ortholog); phosphatidylcholine acyl-chain remodeling (ortholog); phosphatidylcholine biosynthetic process (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955504 760941 791996 - 102020588 AGCD01064829;GBBH01033177;GBDF01208884;XM_013505909 XP_013361363 MODEL 8919697 pseudo LOC102011811 PCNA-associated factor pseudogene NW_004955440 19528120 19528458 - 102011811 AGCD01036637 MODEL 8947478 protein-coding LOC102013365 vomeronasal type-1 receptor 4-like NW_004955609 69961 70845 - 102013365 AGCD01077050;XM_005414936 XP_005414993 MODEL 8700035 pseudo LOC102022452 ubiquitin thioesterase OTUB1-like NW_004955403 808314 811093 - 102022452 AGCD01001708 MODEL 8704220 protein-coding Rpl21 ribosomal protein L21 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH hypotrichosis (ortholog); hypotrichosis 12 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955497 6676584 6681776 + 102030442 AGCD01062643;AGCD01062644;AY533214;GBCQ01004975;NM_001282366 AAS59417;NP_001269295;Q6QN05 PROVISIONAL 730469135 snorna SNORA40 Small nucleolar RNA SNORA40 730469412 snorna SNORA18 Small nucleolar RNA SNORA18 8812860 pseudo LOC102016409 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955521 3670616 3671516 + 102016409 AGCD01068239 MODEL 9008640 ncrna LOC102005978 uncharacterized LOC102005978 NW_004955445 8848190 8852122 - 102005978 AGCD01039616;GBBH01088001;XR_001235594 MODEL 8933622 protein-coding Sema3g semaphorin 3G ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of axon extension (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955430 2409847 2433001 - 102016080 AGCD01029165;AGCD01029166;GBDK01008724;XM_005387316;XM_005387318 XP_005387373;XP_005387375 MODEL 9001480 protein-coding LOC102008992 collagen alpha-1(III) chain-like NW_004955442 14342214 14354918 - 102008992 AGCD01037812;AGCD01037813;GBDJ01377609;XM_013517858;XM_013517859;XM_013517860 XP_013373312;XP_013373313;XP_013373314 MODEL 626189148 snorna SNORD113 Small nucleolar RNA SNORD113/SNORD114 family 8800487 protein-coding Wdr6 WD repeat domain 6 ENCODES a protein that exhibits enzyme regulator activity (ortholog); enzyme-substrate adaptor activity (ortholog); insulin receptor substrate binding (ortholog); INVOLVED IN G1 to G0 transition (ortholog); negative regulation of cell population proliferation (ortholog); wobble position ribose methylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Dwarfism (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955532 1029857 1039020 + 102008347 AGCD01070161;AGCD01070162;GBCB01099321;XM_005410186;XM_013507579 XP_005410243;XP_013363033 MODEL 8876895 protein-coding Trarg1 trafficking regulator of GLUT4 (SLC2A4) 1 INVOLVED IN cellular response to insulin stimulus (ortholog); endosome to plasma membrane protein transport (ortholog); glucose import in response to insulin stimulus (ortholog); ASSOCIATED WITH lung cancer (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); endomembrane system (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955481 2775426 2789929 + 102029742 AGCD01056884;GBCE01105605;XM_005402650 XP_005402707 MODEL 8719494 ncrna LOC102019568 uncharacterized LOC102019568 NW_004955455 1787821 1789349 + 102019568 AGCD01045585;GBDF01251154;XR_001236284;XR_001236285 MODEL 9034410 protein-coding Sgk1 serum/glucocorticoid regulated kinase 1 ENCODES a protein that exhibits 3-phosphoinositide-dependent protein kinase binding (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to aldosterone (ortholog); cellular response to insulin stimulus (ortholog); DNA damage response (ortholog); PARTICIPATES IN glucocorticoid signaling pathway; insulin signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN nuclear speck (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955439 2399992 2406587 + 102006075 AGCD01035643;AGCD01035644;GBCE01001862;GBDK01016728;XM_013517384 XP_013372838 MODEL 9055703 protein-coding Psma2 proteasome 20S subunit alpha 2 ENCODES a protein that exhibits structural constituent of proteasome (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); P-body (ortholog) NW_004955460 880795 890718 + 102012836 AGCD01048350;GBDI01008253;XM_005397715 XP_005397772 MODEL 8819590 protein-coding LOC102010960 zinc finger protein 154-like NW_004955584 561048 567412 + 102010960 AGCD01075948;GBDF01281692;XM_005414367 XP_005414424 MODEL 8780291 protein-coding Rnf13 ring finger protein 13 ENCODES a protein that exhibits JUN kinase binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of JNK cascade (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clubfoot (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endosome (ortholog) NW_004955448 1053676 1195612 + 102022343 AGCD01041251;AGCD01041252;AGCD01041253;GBCQ01108869;XM_005393005;XM_013518631 XP_005393062;XP_013374085 MODEL 8890792 ncrna LOC102018379 uncharacterized LOC102018379 NW_004955470 856113 859567 - 102018379 AGCD01052624;GBDF01054789;XR_263455 MODEL 10187389 protein-coding LOC106147479 proline-rich protein 2-like NW_004955567 1865294 1866342 + 106147479 AGCD01074496;GBDF01087157;XM_013509235 XP_013364689 MODEL 8968131 protein-coding LOC102008239 prolyl-tRNA synthetase associated domain-containing protein 1 NW_004955424 27774507 27776459 - 102008239 AGCD01025126;GBCQ01153725;XM_005385777 XP_005385834 MODEL 8814875 protein-coding Phka2 phosphorylase kinase regulatory subunit alpha 2 INVOLVED IN protein phosphorylation (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN phosphorylase kinase complex (ortholog) NW_004955586 482353 549512 + 102006844 AGCD01076031;GBDJ01314660;XM_005414436;XM_005414437;XM_005414438 XP_005414493;XP_005414494;XP_005414495 MODEL 9060585 protein-coding Ptprc protein tyrosine phosphatase receptor type C ENCODES a protein that exhibits ankyrin binding (ortholog); heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); B cell receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN bleb (ortholog); cell periphery (ortholog); cell surface (ortholog) NW_004955406 35005577 35127395 + 102002992 AGCD01006516;AGCD01006517;GBDI01007524;XM_013521946;XM_013521949;XM_013521953;XM_013521962;XM_013521970;XM_013521971 XP_013377400;XP_013377403;XP_013377407;XP_013377416;XP_013377424;XP_013377425 MODEL 8914868 protein-coding LOC102012159 keratin-associated protein 11-1 NW_004955407 30616573 30617451 - 102012159 AGCD01007639;XM_005375656 XP_005375713 MODEL 730469551 snorna SNORD78 Small nucleolar RNA SNORD78 8934652 protein-coding Polr2e RNA polymerase II, I and III subunit E INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase II (ortholog); transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Dwarfism (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase I complex (ortholog) NW_004955495 6779557 6788241 + 102012554 AGCD01062093;AGCD01062094;GBDJ01005001;XM_005405996 XP_005406053 MODEL 8763089 protein-coding Ppp1r36 protein phosphatase 1 regulatory subunit 36 ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog) NW_004955466 5312602 5339402 - 102017969 AGCD01050873;AGCD01050874;AGCD01050875;GBDF01176713;XM_013521899;XM_013521900;XM_013521901 XP_013377353;XP_013377354;XP_013377355 MODEL 9020557 ncrna LOC102004925 uncharacterized LOC102004925 NW_004955478 8969460 9024925 - 102004925 AGCD01056049;GBBH01155294;XR_001230860;XR_001230861;XR_001230862;XR_001230863;XR_263711 MODEL 8852292 ncrna LOC102003164 uncharacterized LOC102003164 NW_004955428 25464176 25472249 + 102003164 AGCD01028284;GBDF01123213;XR_261308 MODEL 8706351 ncrna LOC102005629 uncharacterized LOC102005629 NW_004955526 3115354 3136784 + 102005629 AGCD01069328;XR_264659 MODEL 8949894 protein-coding LOC102006328 zinc finger protein 792-like NW_004955468 4283745 4310889 + 102006328 AGCD01051904;AGCD01051905;GBDK01043079;XM_005400008;XM_005400009;XM_005400010;XM_005400011;XM_013522364;XM_013522365 XP_005400065;XP_005400066;XP_005400067;XP_005400068;XP_013377818;XP_013377819 MODEL 9045561 protein-coding Plp1 proteolipid protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); structural constituent of myelin sheath (ortholog); INVOLVED IN AMPA selective glutamate receptor signaling pathway (ortholog); astrocyte development (ortholog); axon development (ortholog); ASSOCIATED WITH Chronic Relapsing Experimental Autoimmune Encephalomyelitis (ortholog); epilepsy (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN integrin alphav-beta3 complex (ortholog); myelin sheath (ortholog); plasma membrane (ortholog) NW_004955548 781522 797246 + 102028341 AGCD01072341;GBDK01179399;XM_005411997;XM_005411998 XP_005412054;XP_005412055 MODEL 39133477 snrna U2 U2 spliceosomal RNA 8765089 protein-coding Rhex regulator of hemoglobinization and erythroid cell expansion ENCODES a protein that exhibits erythropoietin receptor binding (ortholog); INVOLVED IN cellular response to erythropoietin (ortholog); erythropoietin-mediated signaling pathway (ortholog); positive regulation of erythrocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 41687577 41703282 + 102016446 AGCD01006688;GBDK01309194;XM_005375383;XM_005375384;XM_013523064 XP_005375440;XP_005375441;XP_013378518 MODEL 9032975 protein-coding Rsph3 radial spoke head 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cilium (ortholog) NW_004955439 3510076 3533924 + 102009763 AGCD01035678;GBDF01004160;XM_005415341 XP_005415398 MODEL 8746147 protein-coding Pkd2l2 polycystin 2 like 2, transient receptor potential cation channel ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); melanoma (ortholog); FOUND IN membrane (ortholog) NW_004955418 2443557 2488860 - 102007768 AGCD01018770;GBDF01088316;XM_013512989;XM_013512990;XM_013512991;XM_013512992;XR_001233530 XP_013368443;XP_013368444;XP_013368445;XP_013368446 MODEL 9033586 trna Trnar-ccu transfer RNA arginine (anticodon CCU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955553;NW_004955553;NW_004955442;NW_004955442;NW_004955494 1884364;1885977;14211807;14190493;3729252 1884436;1886049;14211879;14190565;3729324 +;+;-;-;- 101978840 AGCD01037805;AGCD01037806;AGCD01061481;AGCD01072903 MODEL 8916034 pseudo LOC102010187 glycerol-3-phosphate acyltransferase 3 pseudogene NW_004955512 1355820 1356600 + 102010187 AGCD01066640 MODEL 10256821 ncrna LOC106147480 uncharacterized LOC106147480 NW_004955567 18679 19665 - 106147480 AGCD01074372;GBCE01161374;XR_001232400;XR_001232401 MODEL 8770545 protein-coding Tlcd4 TLC domain containing 4 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955435 278795 351707 + 102020947 AGCD01032720;AGCD01032721;AGCD01032722;GBCQ01033522;XM_013516468;XM_013516469;XM_013516470;XM_013516471;XM_013516472;XM_013516473;XM_013516474;XM_013516475;XM_013516476 XP_013371922;XP_013371923;XP_013371924;XP_013371925;XP_013371926;XP_013371927;XP_013371928;XP_013371929;XP_013371930 MODEL 9025959 protein-coding Spin1 spindlin 1 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); histone reader activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of Wnt signaling pathway (ortholog); protein localization to chromatin (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog); FOUND IN chromatin (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955515 3470956 3518909 - 102019522 AGCD01067287;AGCD01067288;GBCQ01098007;GBDJ01091296;XM_005408884;XM_013506879 XP_005408941;XP_013362333 MODEL 730469250 snorna SNORA64 Small nucleolar RNA SNORA64/SNORA10 family 9061860 protein-coding Rdh10 retinol dehydrogenase 10 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); bud elongation involved in lung branching (ortholog); ear development (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Experimental Liver Cirrhosis (ortholog); Fetal Death (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog); membrane (ortholog) NW_004955444 6878722 6909421 - 102024388 AGCD01038876;GBDI01121275;GBDJ01318433;XM_005392094 XP_005392151 MODEL 8930882 protein-coding Erbb4 erb-b2 receptor tyrosine kinase 4 ENCODES a protein that exhibits epidermal growth factor receptor activity (ortholog); epidermal growth factor receptor binding (ortholog); GABA receptor binding (ortholog); INVOLVED IN cardiac muscle tissue regeneration (ortholog); cell fate commitment (ortholog); cell migration (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amblyopia (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); caveola (ortholog); dendrite (ortholog) NW_004955457 3177905 4236152 + 102026721 AGCD01046765;AGCD01046766;AGCD01046767;AGCD01046768;AGCD01046769;AGCD01046770;AGCD01046771;AGCD01046772;AGCD01046773;AGCD01046774;AGCD01046775;AGCD01046776;AGCD01046777;AGCD01046778;AGCD01046779;AGCD01046780;AGCD01046781;AGCD01046782;AGCD01046783;AGCD01046784;AGCD01046785;AGCD01046786;AGCD01046787;GBCQ01117703;GBCQ01117704;XM_005396937;XM_005396938;XM_005396939;XM_005396940;XM_013520736 XP_005396994;XP_005396995;XP_005396996;XP_005396997;XP_013376190 MODEL 8800240 protein-coding Srsf1 serine and arginine rich splicing factor 1 ENCODES a protein that exhibits DNA topoisomerase binding (ortholog); mRNA binding (ortholog); protein kinase B binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cardiac muscle contraction (ortholog); cellular response to interleukin-17 (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Cardiomegaly (ortholog); cervix uteri carcinoma in situ (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955451 4992634 4996619 + 102004545 AGCD01043157;GBDI01001036;XM_005394041;XR_262578 XP_005394098 MODEL 8983042 protein-coding Sohlh2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cell differentiation (ortholog); oocyte differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955431 9874783 9952044 + 102015557 AGCD01030196;AGCD01030197;AGCD01030198;AGCD01030199;GBDF01039703;XM_013515730 XP_013371184 MODEL 8826099 ncrna LOC102019903 uncharacterized LOC102019903 NW_004955469 5019919 5020907 - 102019903 AGCD01052342;GBDF01177369;XR_263430 MODEL 8803409 protein-coding Prlhr prolactin releasing hormone receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adult feeding behavior (ortholog); feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN obesity pathway; ASSOCIATED WITH esophageal cancer (ortholog); hypertension (ortholog); obesity (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); cilium (ortholog) NW_004955431 23192018 23193130 - 102004506 AGCD01030532;XM_005387879 XP_005387936 MODEL 9015689 ncrna LOC102011358 uncharacterized LOC102011358 NW_004955436 18358012 18378034 - 102011358 AGCD01033960;GBDF01225067;XR_001234940 MODEL 8749713 protein-coding Wdr62 WD repeat domain 62 INVOLVED IN centriole replication (ortholog); cerebral cortex development (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive primary microcephaly (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); nucleus (ortholog) NW_004955468 2504181 2545982 - 102011425 AGCD01051824;AGCD01051825;GBDF01003421;XM_013522434;XM_013522435;XM_013522436;XM_013522437 XP_013377888;XP_013377889;XP_013377890;XP_013377891 MODEL 8994774 protein-coding Psma3 proteasome 20S subunit alpha 3 ENCODES a protein that exhibits structural constituent of proteasome (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); proteasome-associated autoinflammatory syndrome 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); proteasome complex (ortholog) NW_004955466 11979482 11997952 + 102003955 AGCD01051106;GBDJ01081389;XM_005399214;XM_013521926 XP_005399271;XP_013377380 MODEL 9039010 protein-coding LOC102011813 keratin, type II cytoskeletal 74 NW_004955547 2973452 2981010 - 102011813 AGCD01072302;GBDF01116746;XM_005411949 XP_005412006 MODEL 9014614 protein-coding LOC102006333 olfactory receptor 52D1 NW_004955414 21395818 21396783 + 102006333 AGCD01015418;XM_005380089 XP_005380146 MODEL 9041535 protein-coding Rnf130 ring finger protein 130 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN programmed cell death (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955408 561719 660775 + 102029050 AGCD01007923;AGCD01007924;AGCD01007925;AY533211;GBBH01034397;XM_005376010 AAS59414;XP_005376067 MODEL 8810344 protein-coding Lpcat2 lysophosphatidylcholine acyltransferase 2 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); 1-alkylglycerophosphocholine O-acetyltransferase activity (ortholog); INVOLVED IN membrane organization (ortholog); phosphatidylcholine acyl-chain remodeling (ortholog); platelet activating factor biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) NW_004955433 13052480 13120197 + 102005957 AGCD01031674;AGCD01031675;AGCD01031676;GBDI01006652;GBDJ01353510;XM_005388319 XP_005388376 MODEL 730469468 snorna SNORA18 Small nucleolar RNA SNORA18 8724815 ncrna LOC102016414 uncharacterized LOC102016414 NW_004955527 3800944 3816667 - 102016414 AGCD01069485;AGCD01069486;GBDF01176376;XR_264675 MODEL 626189150 snorna SNORD113 Small nucleolar RNA SNORD113/SNORD114 family 8782082 protein-coding C1r complement C1r ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); zymogen activation (ortholog); ASSOCIATED WITH Ehlers-Danlos syndrome (ortholog); Ehlers-Danlos syndrome periodontal type 1 (ortholog); Ehlers-Danlos syndrome periodontal type 2 (ortholog); FOUND IN cell surface (ortholog); complement component C1 complex (ortholog); extracellular region (ortholog) NW_004955413 4652156 4660897 - 102011752 AGCD01013623;GBCE01007078;XM_005378856 XP_005378913 MODEL 8929827 pseudo LOC102004203 programmed cell death protein 5 pseudogene NW_004955543 543218 543599 + 102004203 AGCD01071590;XM_005411306 MODEL 8832261 protein-coding Phkb phosphorylase kinase regulatory subunit beta INVOLVED IN glucose homeostasis (ortholog); glycogen catabolic process (ortholog); positive regulation of glycogen catabolic process (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN phosphorylase kinase complex (ortholog) NW_004955474 7599657 7801083 - 102010476 AGCD01054526;AGCD01054527;AGCD01054528;AGCD01054529;AGCD01054530;GBCB01007397;XM_005401407;XM_005401408;XM_013502733;XM_013502734;XM_013502735 XP_005401464;XP_005401465;XP_013358187;XP_013358188;XP_013358189 MODEL 8914360 protein-coding Pkdcc protein kinase domain containing, cytoplasmic ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); protein kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN bone mineralization (ortholog); embryonic digestive tract development (ortholog); limb morphogenesis (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); genetic disease (ortholog); intrinsic asthma (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955441 9462530 9471446 + 102020720 AGCD01037022;GBCB01022196;GBDJ01006435;XM_005390915 XP_005390972 MODEL 8924496 protein-coding LOC102007472 hemoglobin subunit zeta NW_004955442 17015120 17016686 - 102007472 AGCD01037931;XM_005391674 XP_005391731 MODEL 8941499 ncrna LOC102004928 uncharacterized LOC102004928 NW_004955417 31446138 31470576 + 102004928 AGCD01018652;GBDI01165806;XR_001233455 MODEL 9023876 protein-coding Rars2 arginyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits arginine-tRNA ligase activity (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955411 14470479 14527895 - 102028171 AGCD01011920;AGCD01011921;GBDJ01276669;XM_005377731 XP_005377788 MODEL 9064356 pseudo LOC102008604 calcyclin-binding protein pseudogene NW_004955460 11101580 11102535 - 102008604 AGCD01048629;XR_263056 MODEL 8934067 protein-coding Slc38a2 solute carrier family 38 member 2 ENCODES a protein that exhibits acidic amino acid transmembrane transporter activity (ortholog); alanine:sodium symporter activity (ortholog); amino acid transmembrane transporter activity (ortholog); INVOLVED IN alanine transport (ortholog); amino acid import (ortholog); amino acid transmembrane transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); Contusions (ortholog); FOUND IN axon (ortholog); brush border (ortholog); cytoplasm (ortholog) NW_004955500 5517323 5530055 - 102012220 AGCD01063844;GBBH01063737;GBDI01139981;XM_005406598 XP_005406655 MODEL 8771718 ncrna LOC102005636 uncharacterized LOC102005636 NW_004955542 148238 153369 + 102005636 AGCD01071458;AGCD01071459;GBDF01025206;XR_264850 MODEL 9015823 pseudo LOC102018380 olfactory receptor 51F1-like NW_004955414 20378324 20379265 - 102018380 AGCD01015371 MODEL 39133349 snrna U4 U4 spliceosomal RNA 8835420 protein-coding LOC102010962 small proline-rich protein 3-like NW_004955592 393237 394484 - 102010962 AGCD01076311;GBDI01016409;XM_005414615 XP_005414672 MODEL 8838990 protein-coding LOC102013366 olfactory receptor 2L13-like NW_004955619 101327 102265 + 102013366 AGCD01077337;XM_005415005 XP_005415062 MODEL 730469183 snorna SNORA40 Small nucleolar RNA SNORA40 8974596 pseudo LOC102005982 DCN1-like protein 1 pseudogene NW_004955582 422159 422898 - 102005982 AGCD01075756 MODEL 8912148 protein-coding Sema4a semaphorin 4A INVOLVED IN axonogenesis (ortholog); negative regulation of angiogenesis (ortholog); positive regulation of excitatory synapse assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955545 2316402 2341873 + 102020845 AGCD01071895;AGCD01071896;AGCD01071897;GBDI01084803;XM_005411654;XM_005411655;XM_005411656 XP_005411711;XP_005411712;XP_005411713 MODEL 9017592 ncrna LOC102008997 uncharacterized LOC102008997 NW_004955402 56853757 56893100 + 102008997 AGCD01001479;GBDF01111279;XR_001230748;XR_259106 MODEL 8966528 ncrna LOC102010190 uncharacterized LOC102010190 NW_004955520 1134654 1136351 + 102010190 AGCD01068044;GBCQ01105007;XR_001231874;XR_264583 MODEL 39132861 snorna SNORD79 Small nucleolar RNA SNORD79 730469075 snorna SNORA64 Small nucleolar RNA SNORA64/SNORA10 family 8722007 pseudo LOC102019572 26S protease regulatory subunit 10B-like NW_004955409 2430344 2431601 - 102019572 AGCD01009199 MODEL 730469047 snorna SNORD113 Small nucleolar RNA SNORD113/SNORD114 family 9019370 protein-coding Polr2f RNA polymerase II, I and III subunit F INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase II (ortholog); transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 24300340 24309798 + 102013404 AGCD01014360;GBDF01005505;XM_005379236 XP_005379293 MODEL 39131310 protein-coding TRAV22 T cell receptor alpha variable 22 8996849 protein-coding Sgk2 serum/glucocorticoid regulated kinase 2 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955445 13581145 13625320 - 102026270 AGCD01039794;AGCD01039795;AGCD01039796;AGCD01039797;AGCD01039798;AGCD01039799;GBCQ01033867;XM_005392499;XM_013518253;XR_001235575 XP_005392556;XP_013373707 MODEL 8789109 pseudo LOC102004207 crooked neck-like protein 1 NW_004955442 6826753 6831353 - 102004207 AGCD01037599 MODEL 8947282 protein-coding Srsf10 serine and arginine rich splicing factor 10 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cytosolic transport (ortholog); mRNA splice site recognition (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Endometrial Neoplasms (ortholog); macular degeneration (ortholog); Ovarian Neoplasms (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); neuronal cell body (ortholog) NW_004955452 3831545 3846292 - 102024418 AGCD01043949;AGCD01043950;GBCE01032956;XM_005394789;XM_005394790;XM_005394791;XM_005394792;XM_005394794;XM_013519618 XP_005394846;XP_005394847;XP_005394848;XP_005394849;XP_005394851;XP_013375072 MODEL 8961505 protein-coding LOC102019906 olfactory receptor 52B4-like NW_004955414 19994648 19995592 + 102019906 AGCD01015350;XM_005380460 XP_005380517 MODEL 8875990 protein-coding Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); cellular response to UV (ortholog); DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleus (ortholog) NW_004955429 18408121 18415832 + 102024260 AGCD01028902;AGCD01028903;GBDF01047104;XM_005387125;XM_005387126;XM_005387127;XM_005387128;XM_013515475;XR_001234519;XR_001234520 XP_005387182;XP_005387183;XP_005387184;XP_005387185;XP_013370929 MODEL 8923870 protein-coding Prlr prolactin receptor ENCODES a protein that exhibits lipid binding (ortholog); peptide hormone binding (ortholog); prolactin receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to granulocyte macrophage colony-stimulating factor stimulus (ortholog); lactation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog) NW_004955426 20161406 20326688 - 102007036 AGCD01026564;AGCD01026565;AGCD01026566;GBDI01208671;XM_005386193;XM_005386194;XM_005386195;XM_013515018 XP_005386250;XP_005386251;XP_005386252;XP_013370472 MODEL 15036840 trna Trnar-gcg transfer RNA arginine (anticodon GCG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978838 8986430 protein-coding Wdr64 WD repeat domain 64 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955406 10317674 10439077 - 102017950 AGCD01005855;AGCD01005856;AGCD01005857;AGCD01005858;AGCD01005859;AGCD01005860;AGCD01005861;GBDF01159246;GBDF01159247;XM_013520508 XP_013375962 MODEL 9036098 ncrna LOC102012163 uncharacterized LOC102012163 NW_004955409 610554 611768 - 102012163 AGCD01009158;GBDF01126147;XR_259741 MODEL 8922520 protein-coding Rsph4a radial spoke head component 4A INVOLVED IN axoneme assembly (ortholog); cilium movement (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); radial spoke head (ortholog) NW_004955436 30638 43581 - 102006069 AGCD01033530;GBDK01359557;XM_005389115;XM_013516647;XM_013516648;XM_013516649 XP_005389172;XP_013372101;XP_013372102;XP_013372103 MODEL 39133350 snrna U4 U4 spliceosomal RNA 10289161 ncrna LOC106147481 uncharacterized LOC106147481 NW_004955567 60768 71971 + 106147481 AGCD01074376;GBCQ01143758;XR_001232402 MODEL 8754963 protein-coding Ptprcap protein tyrosine phosphatase receptor type C associated protein FOUND IN plasma membrane (ortholog) NW_004955422 18041094 18043687 + 102017463 AGCD01022936;GBDK01171715;XM_005384326 XP_005384383 MODEL 8992587 protein-coding LOC102016417 charged multivesicular body protein 1b-2 NW_004955529 693587 750753 - 102016417 AGCD01069651;AGCD01069652;AGCD01069653;AGCD01069654;AGCD01069655;AGCD01069656;GBDJ01164486;XM_005410068 XP_005410125 MODEL 9037775 gene LOC102018382 Ig heavy chain V-I region 5-like NW_004955470 467752 468318 - 102018382 AGCD01052614;XM_005400820 MODEL 8967142 protein-coding Spin4 spindlin family member 4 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH Lui-Jee-Baron syndrome (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955475 3967813 3971725 - 102030189 AGCD01054863;XM_005401549 XP_005401606 MODEL 8801082 protein-coding LOC102003167 olfactory receptor 5D13-like NW_004955511 533129 545086 + 102003167 AGCD01066333;XM_005408198 XP_005408255 MODEL 9044426 protein-coding C1rl complement C1r subcomponent like ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955413 4663643 4670454 - 102012081 AGCD01013623;GBDI01312342;XM_005378857;XM_005378858 XP_005378914;XP_005378915 MODEL 39131973 snorna SNORD81 Small nucleolar RNA SNORD81 9002611 protein-coding LOC102022458 translation initiation factor IF-2-like NW_004955405 16186365 16195618 + 102022458 AGCD01004963;GBDF01277426;XM_005374686 XP_005374743 MODEL 8704464 protein-coding Son SON DNA and RNA binding protein ENCODES a protein that exhibits RNA binding (ortholog); RS domain binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); mitotic cytokinesis (ortholog); mRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Apnea (ortholog); FOUND IN nuclear speck (ortholog) NW_004955407 32974656 33007073 + 102016237 AGCD01007692;AGCD01007693;GBDF01053041;XM_013504280;XM_013504282;XM_013504287;XM_013504291;XM_013504293 XP_013359734;XP_013359736;XP_013359741;XP_013359745;XP_013359747 MODEL 39133478 snrna U2 U2 spliceosomal RNA 8736520 protein-coding Rpl22 ribosomal protein L22 ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); translation at presynapse (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) NW_004955486 6302092 6310789 + 102013937 AGCD01059117;GBDF01001626;XM_005404100;XM_005404101 XP_005404157;XP_005404158 MODEL 8830531 protein-coding LOC102004930 disintegrin and metalloproteinase domain-containing protein 1b-like NW_004955482 8479193 8490619 + 102004930 AGCD01057525;AGCD01057526;AGCD01057527;GBDF01005618;XM_005403178 XP_005403235 MODEL 8770379 protein-coding Sgk3 serum/glucocorticoid regulated kinase family member 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of extrinsic apoptotic signaling pathway in absence of ligand (ortholog); ASSOCIATED WITH hypotrichosis (ortholog); prostate cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog) NW_004955444 12385747 12501589 - 102013659 AGCD01039071;AGCD01039072;AGCD01039073;AGCD01039074;GBCQ01126883;XM_005392140;XM_005392141;XM_005392143;XM_013518177;XM_013518178 XP_005392197;XP_005392198;XP_005392200;XP_013373631;XP_013373632 MODEL 8952633 pseudo LOC102006337 peptidyl-prolyl cis-trans isomerase G pseudogene NW_004955414 2350960 2358590 - 102006337 AGCD01014790;AGCD01014791;AGCD01014792 MODEL 8727496 ncrna LOC102010963 uncharacterized LOC102010963 NW_004955450 6116015 6122123 - 102010963 AGCD01042519;GBDF01296262;XR_262533 MODEL 9029858 protein-coding Psma4 proteasome 20S subunit alpha 4 ENCODES a protein that exhibits structural constituent of proteasome (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955450 925070 932237 + 102010961 AGCD01042346;GBDI01059858;XM_005393451;XM_005393452;XM_005393453;XM_005393454 XP_005393508;XP_005393509;XP_005393510;XP_005393511 MODEL 8727518 protein-coding Tlcd5 TLC domain containing 5 ASSOCIATED WITH exfoliation syndrome (ortholog); melanoma (ortholog) NW_004955412 21344464 21350675 + 102011421 AGCD01013021;GBCE01163283;XM_005378348;XM_005378349;XM_005378350 XP_005378405;XP_005378406;XP_005378407 MODEL 9041051 protein-coding Rnf133 ring finger protein 133 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955479 4318513 4319974 - 102011443 AGCD01056320;GBDF01046816;XM_005402322 XP_005402379 MODEL 730469289 snorna SNORA19 Small nucleolar RNA SNORA19 730469185 snorna SNORA40 Small nucleolar RNA SNORA40 8830637 protein-coding Lpcat3 lysophosphatidylcholine acyltransferase 3 ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); 1-acylglycerophosphoethanolamine O-acyltransferase activity (ortholog); 1-acylglycerophosphoserine O-acyltransferase activity (ortholog); INVOLVED IN chylomicron assembly (ortholog); endoplasmic reticulum membrane organization (ortholog); intestinal stem cell homeostasis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955413 4571028 4605097 - 102011100 AGCD01013621;GBDK01076822;XM_005378854 XP_005378911 MODEL 8887067 protein-coding LOC102011365 immunoglobulin iota chain NW_004955442 17173705 17174412 - 102011365 AGCD01037944;GBBH01018271;XM_005391688 XP_005391745 MODEL 8980768 protein-coding Ppp1r3a protein phosphatase 1 regulatory subunit 3A PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH arrhythmogenic right ventricular dysplasia 9 (ortholog); diabetes mellitus (ortholog); hypoglycemia (ortholog) NW_004955432 19854649 19893148 - 102007460 AGCD01031193;GBCB01005118;XM_005388110;XM_005388111 XP_005388167;XP_005388168 MODEL 8963439 protein-coding Sema4b semaphorin 4B ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); lymphoma (ortholog); FOUND IN glutamatergic synapse (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955416 15107258 15143338 - 102014246 AGCD01017301;AGCD01017302;GBBH01034143;GBDJ01007563;XM_013512481;XM_013512482 XP_013367935;XP_013367936 MODEL 9049882 protein-coding Erbin erbb2 interacting protein ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); negative regulation of monocyte chemotactic protein-1 production (ortholog); negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell junction (ortholog); cytoplasm (ortholog) NW_004955446 3046268 3151796 - 102017075 AGCD01039998;AGCD01039999;AGCD01040000;AGCD01040001;AGCD01040002;GBBH01209360;GBDJ01086651;XM_013518424;XM_013518425;XM_013518427;XM_013518428;XM_013518429;XM_013518430;XM_013518431;XM_013518432 XP_013373878;XP_013373879;XP_013373881;XP_013373882;XP_013373883;XP_013373884;XP_013373885;XP_013373886 MODEL 8733592 protein-coding Rdh11 retinol dehydrogenase 11 ENCODES a protein that exhibits 11-cis-retinol dehydrogenase (NADP+) activity (ortholog); aldehyde dehydrogenase (NADP+) activity (ortholog); all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN cellular detoxification of aldehyde (ortholog); retinal metabolic process (ortholog); retinoid metabolic process (ortholog); PARTICIPATES IN retinoid cycle metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Retinal Dystrophy, Juvenile Cataracts, and Short Stature Syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); photoreceptor inner segment (ortholog); photoreceptor outer segment membrane (ortholog) NW_004955466 2506641 2521506 + 102011294 AGCD01050740;AGCD01050741;AGCD01050742;GBDI01113403;XM_005399068 XP_005399125 MODEL 8861623 ncrna LOC102016419 uncharacterized LOC102016419 NW_004955534 1133388 1134648 - 102016419 AGCD01070487;GBDF01212577;XR_264761 MODEL 9016803 protein-coding LOC102019573 olfactory receptor 6C6-like NW_004955458 2670696 2671655 - 102019573 AGCD01047240;XM_005397499 XP_005397556 MODEL 9014082 protein-coding Spindoc spindlin interactor and repressor of chromatin binding INVOLVED IN DNA damage response (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog); site of DNA damage (ortholog) NW_004955422 21190135 21198182 - 102022614 AGCD01023104;GBCQ01124597;GBDI01176756;XM_013514066;XM_013514067;XM_013514068 XP_013369520;XP_013369521;XP_013369522 MODEL 8844853 ncrna LOC102011816 uncharacterized LOC102011816 NW_004955443 10236461 10240981 - 102011816 AGCD01038372;GBDF01078584;XR_262203 MODEL 8719292 protein-coding LOC102013368 disintegrin and metalloproteinase domain-containing protein 20-like NW_004955656 248 2205 - 102013368 AGCD01077844;GBDF01010724;GBDF01010725;XM_005415057 XP_005415114 MODEL 8744496 ncrna LOC102019914 uncharacterized LOC102019914 NW_004955481 6647496 6652310 + 102019914 AGCD01057032;GBDF01036886;XR_263787 MODEL 8823950 protein-coding Rasa1 RAS p21 protein activator 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); GTPase binding (ortholog); kinase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); angiogenesis (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); arteriovenous malformation (ortholog); basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) NW_004955418 23807740 23897699 - 102008221 AGCD01019313;AGCD01019314;GBDI01008697;GBDK01184895;XM_005382300 XP_005382357 MODEL 9033653 protein-coding LOC102005637 cytochrome c oxidase subunit 8C, mitochondrial FOUND IN mitochondrion (ortholog) NW_004955438 15480509 15481812 + 102005637 AGCD01035370;GBDF01049097;XM_005390345 XP_005390402 MODEL 9068074 ncrna LOC102010191 uncharacterized LOC102010191 NW_004955521 1508637 1515821 + 102010191 AGCD01068187;GBDF01220340;XR_264600;XR_264602 MODEL 9055848 protein-coding Rsph6a radial spoke head 6 homolog A INVOLVED IN manchette disassembly (ortholog); sperm flagellum assembly (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN axoneme (ortholog); radial spoke (ortholog); radial spoke head (ortholog) NW_004955574 247728 264238 - 102022342 AGCD01075095;AGCD01075096;AGCD01075097;GBDJ01355094;XM_005413817 XP_005413874 MODEL 9028747 protein-coding LOC102007473 N-formyl peptide receptor 2-like NW_004955558 724982 760617 - 102007473 AGCD01073387;AGCD01073388;AGCD01073389;GBDK01358972;XM_005412669;XM_013508868;XM_013508869 XP_005412726;XP_013364322;XP_013364323 MODEL 9057667 protein-coding Phkg1 phosphorylase kinase catalytic subunit gamma 1 ENCODES a protein that exhibits ATP binding (ortholog); enzyme binding (ortholog); phosphorylase kinase activity (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycogen metabolic process (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); FOUND IN phosphorylase kinase complex (ortholog) NW_004955456 8251789 8259205 - 102003092 AGCD01046465;GBCB01003996;XM_005396702 XP_005396759 MODEL 8942963 protein-coding Plp2 proteolipid protein 2 ENCODES a protein that exhibits chemokine binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955543 658617 662441 + 102009544 AGCD01071597;AGCD01071598;GBDK01020755;GBDK01020756;XM_005411327 XP_005411384 MODEL 8767676 ncrna LOC102008245 uncharacterized LOC102008245 NW_004955429 19596397 19597902 - 102008245 AGCD01028966;GBCB01088322;XR_261365 MODEL 626189170 snorna SNORD113 Small nucleolar RNA SNORD113/SNORD114 family 8943653 ncrna LOC102008606 uncharacterized LOC102008606 NW_004955410 29146901 29160996 - 102008606 AGCD01011276;GBDF01148292;XR_001232701;XR_001232702 MODEL 153211019 protein-coding TRBV12-5 T cell receptor beta variable 12-5 8828615 protein-coding Slc38a3 solute carrier family 38 member 3 ENCODES a protein that exhibits L-alanine transmembrane transporter activity (ortholog); L-asparagine transmembrane transporter activity (ortholog); L-asparagine, sodium:proton antiporter activity (ortholog); INVOLVED IN asparagine transmembrane transport (ortholog); asparagine transport (ortholog); cellular response to potassium ion starvation (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 102 (ortholog); Dwarfism (ortholog); Endotoxemia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); membrane (ortholog) NW_004955532 2023694 2046556 + 102026468 AGCD01070209;AGCD01070210;AGCD01070211;GBCQ01114446;XM_005410248;XM_005410249 XP_005410305;XP_005410306 MODEL 8970434 ncrna LOC102022464 uncharacterized LOC102022464 NW_004955407 26752371 26760950 - 102022464 AGCD01007537;GBDF01242626;XR_001231703;XR_259588 MODEL 8751649 protein-coding Srsf11 serine and arginine rich splicing factor 11 ENCODES a protein that exhibits identical protein binding (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nuclear speck (ortholog) NW_004955423 21669925 21706260 - 102007445 AGCD01023946;AGCD01023947;GBBH01032130;GBCQ01062255;XM_013514400;XM_013514401;XM_013514402 XP_013369854;XP_013369855;XP_013369856 MODEL 8957773 protein-coding Prm3 protamine 3 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN cytoplasm (ortholog) NW_004955442 7308621 7309105 + 102030572 AGCD01037623;GBDF01008604;XM_005391167 XP_005391224 MODEL 8929960 protein-coding LOC102009002 KN motif and ankyrin repeat domain-containing protein 2-like NW_004955774 14744 24159 - 102009002 AGCD01078322;AGCD01078323;AGCD01078324;GBCQ01009072;GBDJ01022892;XM_013510190 XP_013365644 MODEL 8978481 protein-coding Rnf135 ring finger protein 135 ENCODES a protein that exhibits identical protein binding (ortholog); ribonucleoprotein complex binding (ortholog); RIG-I binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); free ubiquitin chain polymerization (ortholog); positive regulation of interferon-beta production (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); ribonucleoprotein complex (ortholog) NW_004955481 7111760 7122800 + 102011661 AGCD01057054;GBBH01113146;GBCQ01000813;XM_005402930;XM_013503524;XM_013503526 XP_005402987;XP_013358978;XP_013358980 MODEL 8873695 ncrna LOC102010965 uncharacterized LOC102010965 NW_004955403 1991898 2019275 + 102010965 AGCD01001728;GBDF01163403;XR_001233151;XR_259135 MODEL 626189190 snorna SNORA64 Small nucleolar RNA SNORA64/SNORA10 family 730468949 snorna SNORA19 Small nucleolar RNA SNORA19 8754871 ncrna LOC102012171 uncharacterized LOC102012171 NW_004955462 1256543 1258197 + 102012171 AGCD01049105;GBDF01021159;XR_263088 MODEL 10346777 protein-coding LOC106147482 uncharacterized LOC106147482 NW_004955567 1149476 1179237 - 106147482 AGCD01074460;AGCD01074461;XM_013509289 XP_013364743 MODEL 8974742 pseudo LOC102011366 protein RUFY3 pseudogene NW_004955442 14907176 14908675 + 102011366 AGCD01037848 MODEL 8749865 protein-coding Ppp1r3b protein phosphatase 1 regulatory subunit 3B ENCODES a protein that exhibits [phosphorylase] phosphatase activity (ortholog); enzyme binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN negative regulation of glycogen catabolic process (ortholog); positive regulation of glycogen biosynthetic process (ortholog); regulation of glycogen biosynthetic process (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN glycogen granule (ortholog); protein phosphatase type 1 complex (ortholog) NW_004955463 5208127 5220970 - 102019783 AGCD01049637;GBBH01150362;XM_005398360;XM_005398361 XP_005398417;XP_005398418 MODEL 39131971 snorna SNORD81 Small nucleolar RNA SNORD81 8780783 protein-coding C1s complement C1s ENCODES a protein that exhibits identical protein binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); glial cell differentiation (ortholog); protein maturation (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); autoimmune hepatitis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); complement component C1 complex (ortholog); extracellular region (ortholog) NW_004955413 4620450 4630860 + 102011424 AGCD01013621;GBDF01017372;XM_005378855 XP_005378912 MODEL 8808078 protein-coding Rdh12 retinol dehydrogenase 12 ENCODES a protein that exhibits 11-cis-retinol dehydrogenase (NADP+) activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN cellular detoxification of aldehyde (ortholog); retinol metabolic process (ortholog); visual perception (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); Leber congenital amaurosis (ortholog); FOUND IN ciliary transition zone (ortholog); endoplasmic reticulum membrane (ortholog); photoreceptor inner segment (ortholog) NW_004955466 2473145 2485779 - 102010351 AGCD01050739;GBCE01139121;XM_005399065 XP_005399122 MODEL 39133479 snrna U2 U2 spliceosomal RNA 8832071 trna Trnar-ucg transfer RNA arginine (anticodon UCG) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955483;NW_004955416;NW_004955553;NW_004955553 745122;769025;15772231;1885684;1885407 745194;769097;15772303;1885756;1885479 -;-;-;+;- 101978837 AGCD01017343;AGCD01057629;AGCD01057630;AGCD01072903 MODEL 8897858 protein-coding LOC102004931 olfactory receptor 1L6-like NW_004955419 5194803 5195732 - 102004931 AGCD01019788;XM_005382521 XP_005382578 MODEL 9045102 protein-coding Sorbs1 sorbin and SH3 domain containing 1 ENCODES a protein that exhibits insulin receptor binding (ortholog); protein kinase binding (ortholog); signaling receptor complex adaptor activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); cellular response to insulin stimulus (ortholog); focal adhesion assembly (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); autistic disorder (ortholog); FOUND IN adherens junction (ortholog); cell-substrate junction (ortholog); cytoskeleton (ortholog) NW_004955507 1622567 1849047 - 102007575 AGCD01065569;AGCD01065570;AGCD01065571;AGCD01065572;AGCD01065573;GBCE01159755;XM_013506166;XM_013506167;XM_013506168;XM_013506169;XM_013506170;XM_013506171;XM_013506173;XM_013506174;XM_013506175;XM_013506176;XM_013506177;XM_013506178;XM_013506179;XM_013506180;XM_013506181;XM_013506182;XM_013506183;XM_013506184;XM_013506185;XM_013506186;XM_013506187;XM_013506188;XM_013506189 XP_013361620;XP_013361621;XP_013361622;XP_013361623;XP_013361624;XP_013361625;XP_013361627;XP_013361628;XP_013361629;XP_013361630;XP_013361631;XP_013361632;XP_013361633;XP_013361634;XP_013361635;XP_013361636;XP_013361637;XP_013361638;XP_013361639;XP_013361640;XP_013361641;XP_013361642;XP_013361643 MODEL 8916145 pseudo LOC102013370 serine/Arginine-related protein 53 pseudogene NW_004955403 40310550 40311721 - 102013370 AGCD01002680;XM_005373899 MODEL 39133351 snrna U4 U4 spliceosomal RNA 730469021 snorna SNORA40 Small nucleolar RNA SNORA40 9023214 protein-coding Rasa2 RAS p21 protein activator 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955508 4097455 4199954 - 102029422 AGCD01065862;GBDK01323932;XM_013506264 XP_013361718 MODEL 9001350 protein-coding C2 complement C2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); complement activation (ortholog); complement activation, classical pathway (ortholog); ASSOCIATED WITH age related macular degeneration 14 (ortholog); Alzheimer's disease (ortholog); atypical hemolytic-uremic syndrome (ortholog); FOUND IN cell surface (ortholog); classical-complement-pathway C3/C5 convertase complex (ortholog); symbiont cell surface (ortholog) NW_004955437 449171 460898 + 102004317 AGCD01034137;GBCE01029038;XM_005389395 XP_005389452 MODEL 8734054 ncrna LOC102003168 uncharacterized LOC102003168 NW_004955513 4074732 4078682 + 102003168 AGCD01066914;GBDF01146373;XR_264473 MODEL 8796653 protein-coding LOC102004209 uncharacterized LOC102004209 NW_004955444 19152362 19215916 - 102004209 AGCD01039271;AGCD01039272;AGCD01039273;AGCD01039274;XM_005392186 XP_005392243 MODEL 8925462 protein-coding Polr2g RNA polymerase II subunit G INVOLVED IN transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II, core complex (ortholog) NW_004955599 469233 471761 - 102008278 AGCD01076651;GBDI01120679;XM_005414767 XP_005414824 MODEL 8863175 protein-coding Ptprd protein tyrosine phosphatase receptor type D ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); heterophilic cell-cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); presynaptic membrane (ortholog) NW_004955434 12033825 14132636 - 102009647 AGCD01032383;AGCD01032384;AGCD01032385;AGCD01032386;AGCD01032387;AGCD01032388;AGCD01032389;AGCD01032390;AGCD01032391;AGCD01032392;AGCD01032393;AGCD01032394;AGCD01032395;AGCD01032396;AGCD01032397;AGCD01032398;AGCD01032399;AGCD01032400;AGCD01032401;AGCD01032402;AGCD01032403;AGCD01032404;AGCD01032405;AGCD01032406;AGCD01032407;AGCD01032408;AGCD01032409;AGCD01032410;AGCD01032411;AGCD01032412;AGCD01032413;AGCD01032414;AGCD01032415;AGCD01032416;AGCD01032417;AGCD01032418;GBBH01036507;XM_013516328;XM_013516329;XM_013516330;XM_013516331;XM_013516332;XM_013516333;XM_013516334;XM_013516335;XM_013516336;XM_013516337 XP_013371782;XP_013371783;XP_013371784;XP_013371785;XP_013371786;XP_013371787;XP_013371788;XP_013371789;XP_013371790;XP_013371791 MODEL 9023503 protein-coding Pkdrej polycystin family receptor for egg jelly INVOLVED IN regulation of acrosome reaction (ortholog); FOUND IN nucleus (ortholog); plasma membrane (ortholog) NW_004955413 30377627 30384749 - 102009824 AGCD01014608;GBDF01003380;XM_005379503;XM_005379505;XM_005379506 XP_005379560;XP_005379562;XP_005379563 MODEL 8868620 protein-coding LOC102007476 putative methyl-CpG-binding domain protein 3-like 5 NW_004955563 661965 676066 + 102007476 AGCD01074073;AGCD01074074;AGCD01074075;GBDF01166412;XM_005413108 XP_005413165 MODEL 8824276 protein-coding LOC102019576 uncharacterized LOC102019576 NW_004955460 10273715 10276083 + 102019576 AGCD01048576;GBBH01064357;XM_013521115 XP_013376569 MODEL 8861867 protein-coding Sema4c semaphorin 4C INVOLVED IN cell migration in hindbrain (ortholog); cerebellum development (ortholog); muscle cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic density membrane (ortholog) NW_004955470 4213006 4220167 - 102023897 AGCD01052728;GBCE01075898;GBDI01172471;XM_013522747 XP_013378201 MODEL 626189175 snorna SNORD113 Small nucleolar RNA SNORD113/SNORD114 family 8831386 protein-coding Rho rhodopsin ENCODES a protein that exhibits retinal binding (ortholog); spectrin binding (ortholog); INVOLVED IN absorption of visible light (ortholog); cellular response to light stimulus (ortholog); detection of light stimulus (ortholog); PARTICIPATES IN altered visual phototransduction pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH blindness (ortholog); cataract (ortholog); Coats disease (ortholog); FOUND IN cell-cell junction (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955429 17787337 17791982 - 102012673 AGCD01028867;GBBH01131777;XM_005387085 XP_005387142 MODEL 9048317 protein-coding Sgms1 sphingomyelin synthase 1 ENCODES a protein that exhibits ceramide cholinephosphotransferase activity (ortholog); ceramide phosphoethanolamine synthase activity (ortholog); phosphatidylcholine phospholipase C activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); ceramide biosynthetic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN Golgi membrane (ortholog); Golgi trans cisterna (ortholog); Golgi trans cisterna membrane (ortholog) NW_004955425 5507905 5819357 + 102030096 AGCD01025350;AGCD01025351;AGCD01025352;AGCD01025353;AGCD01025354;AGCD01025355;AGCD01025356;AGCD01025357;GBDI01187376;XM_005385896;XM_005385897;XM_013514835;XM_013514836;XM_013514837;XM_013514838;XM_013514839 XP_005385953;XP_005385954;XP_013370289;XP_013370290;XP_013370291;XP_013370292;XP_013370293 MODEL 8835678 protein-coding Tldc2 TBC/LysM-associated domain containing 2 INVOLVED IN negative regulation of cellular response to oxidative stress (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955422 24781476 24795112 - 102018842 AGCD01023235;AGCD01023236;GBBH01208237;XM_005384726;XM_013514016;XM_013514017;XM_013514018;XM_013514020 XP_005384783;XP_013369470;XP_013369471;XP_013369472;XP_013369474 MODEL 9051278 protein-coding LOC102011817 40S ribosomal protein S27-like NW_004955444 12300883 12301137 - 102011817 AGCD01039067;XM_005392136 XP_005392193 MODEL 8737937 ncrna LOC102005638 uncharacterized LOC102005638 NW_004955439 17644083 17645810 + 102005638 AGCD01036042;GBDF01110804;XR_001235185;XR_261994 MODEL 9062331 protein-coding Ptpre protein tyrosine phosphatase receptor type E ENCODES a protein that exhibits identical protein binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cell surface receptor protein tyrosine phosphatase signaling pathway (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); regulation of mast cell activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955477 5688936 5838264 + 102014893 AGCD01055598;GBDF01075904;XM_005402013;XM_005402014;XM_005402018;XM_005402019;XM_013503075;XM_013503076;XM_013503077;XM_013503078 XP_005402070;XP_005402071;XP_005402075;XP_005402076;XP_013358529;XP_013358530;XP_013358531;XP_013358532 MODEL 8802791 ncrna LOC102006338 uncharacterized LOC102006338 NW_004955472 12747044 12750245 - 102006338 AGCD01053814;GBDJ01152684;XR_263575 MODEL 39131516 protein-coding SRSF12 serine and arginine rich splicing factor 12 9007428 protein-coding Psma5 proteasome 20S subunit alpha 5 ENCODES a protein that exhibits structural constituent of proteasome (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955435 12823137 12845631 - 102026037 AGCD01033168;AGCD01033169;GBBH01061856;XM_005388853;XM_013516454 XP_005388910;XP_013371908 MODEL 9024781 protein-coding Prmt1 protein arginine methyltransferase 1 ENCODES a protein that exhibits arginine N-methyltransferase activity (ortholog); enzyme binding (ortholog); GATOR1 complex binding (ortholog); INVOLVED IN cardiac muscle tissue development (ortholog); cellular response to methionine (ortholog); DNA damage response (ortholog); PARTICIPATES IN androgen signaling pathway; estrogen signaling pathway; histone modification pathway; ASSOCIATED WITH asthma (ortholog); cervical cancer (ortholog); cleft palate (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lysosomal membrane (ortholog) NW_004955559 1205340 1215672 - 102009115 AGCD01073634;AGCD01073635;AGCD01073636;GBBH01032002;XM_005412853;XM_005412854;XM_005412855;XM_005412856;XM_013508977;XM_013508978 XP_005412910;XP_005412911;XP_005412912;XP_005412913;XP_013364431;XP_013364432 MODEL 8839520 protein-coding Lpcat4 lysophosphatidylcholine acyltransferase 4 ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); 1-acylglycerophosphoethanolamine O-acyltransferase activity (ortholog); 1-acylglycerophosphoserine O-acyltransferase activity (ortholog); INVOLVED IN phosphatidylcholine acyl-chain remodeling (ortholog); phosphatidylethanolamine acyl-chain remodeling (ortholog); phosphatidylserine acyl-chain remodeling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955416 251057 257379 + 102003235 AGCD01016791;GBBH01034974;GBBH01034975;XM_013512655 XP_013368109 MODEL 9007053 protein-coding LOC102010966 uncharacterized LOC102010966 NW_004955450 12785559 12807014 + 102010966 AGCD01042708;AGCD01042709;GBDJ01327161;XM_013518835 XP_013374289 MODEL 8816062 protein-coding Rnf138 ring finger protein 138 ENCODES a protein that exhibits protein kinase binding (ortholog); single-stranded DNA binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); DNA double-strand break processing involved in repair via single-strand annealing (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); high grade glioma (ortholog); FOUND IN chromosome (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955402 19344480 19358799 + 102024745 AGCD01000561;GBDF01008387;GBDK01238354;XM_013507405 XP_013362859 MODEL 8988403 protein-coding LOC102016421 uncharacterized LOC102016421 NW_004955538 2155703 2159116 - 102016421 AGCD01071102;GBDF01120673;XM_013507821 XP_013363275 MODEL 8742137 protein-coding LOC102010200 protein S100-A6-like NW_004955545 34876 36059 - 102010200 AGCD01071760;GBDI01224351;XM_005411403 XP_005411460 MODEL 8907916 protein-coding Erc1 ELKS/RAB6-interacting/CAST family member 1 ENCODES a protein that exhibits PDZ domain binding (ortholog); small GTPase binding (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); regulation of calcium-dependent activation of synaptic vesicle fusion (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955454 3584910 4036276 + 102023327 AGCD01045094;AGCD01045095;AGCD01045096;AGCD01045097;AGCD01045098;AGCD01045099;AGCD01045100;AGCD01045101;AGCD01045102;AGCD01045103;AGCD01045104;AGCD01045105;AGCD01045106;AGCD01045107;AGCD01045108;GBBH01147455;XM_005395944;XM_005395945;XM_005395946;XM_005395947;XM_005395948;XM_005395949;XM_013520185;XM_013520186;XM_013520187;XM_013520189;XM_013520190;XM_013520191;XM_013520192 XP_005396001;XP_005396002;XP_005396003;XP_005396004;XP_005396005;XP_005396006;XP_013375639;XP_013375640;XP_013375641;XP_013375643;XP_013375644;XP_013375645;XP_013375646 MODEL 8974311 protein-coding LOC102019919 acylcarnitine hydrolase-like NW_004955484 9640245 9648664 - 102019919 AGCD01058424;GBCQ01093038;XM_013504018 XP_013359472 MODEL 8817383 protein-coding Rsph9 radial spoke head component 9 INVOLVED IN axonemal central apparatus assembly (ortholog); axoneme assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); motile cilium (ortholog) NW_004955437 9437281 9448514 + 102013447 AGCD01034531;GBDF01000568;XM_005389787;XM_013516944 XP_005389844;XP_013372398 MODEL 8790149 protein-coding Rpl22l1 ribosomal protein L22 like 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog) NW_004955420 1016175 1020028 - 102022086 AGCD01020560;GBDJ01016978;XM_005382984;XM_005382985 XP_005383041;XP_005383042 MODEL 8859249 protein-coding Spink1 serine peptidase inhibitor Kazal type 1 ENCODES a protein that exhibits peptidase inhibitor activity (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN cellular response to peptide hormone stimulus (ortholog); negative regulation of calcium ion import (ortholog); negative regulation of nitric oxide-cGMP mediated signal transduction (ortholog); ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); cervical adenocarcinoma (ortholog); Chronic Experimental Pancreatitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955415 6328672 6378611 + 102010474 AGCD01016014;GBDF01155364;XM_005380652;XM_005380653 XP_005380709;XP_005380710 MODEL 8788376 pseudo LOC102008246 olfactory receptor 5A1-like NW_004955511 3810447 3812052 - 102008246 AGCD01066476 MODEL 9004579 pseudo LOC102011370 olfactory receptor 7G1-like NW_004955563 374406 376655 + 102011370 AGCD01074064 MODEL 8864151 protein-coding Phkg2 phosphorylase kinase catalytic subunit gamma 2 ENCODES a protein that exhibits ATP binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycogen metabolic process (ortholog); positive regulation of glycogen catabolic process (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytosol (ortholog); phosphorylase kinase complex (ortholog) NW_004955493 7612251 7622486 + 102017783 AGCD01061205;AGCD01061206;GBDI01084312;XM_005405269;XM_013504763;XM_013504764 XP_005405326;XP_013360217;XP_013360218 MODEL 9049061 protein-coding LOC102005985 uncharacterized LOC102005985 NW_004955450 13197296 13199813 + 102005985 AGCD01042729;XM_005393815 XP_005393872 MODEL 9060294 ncrna LOC102019577 uncharacterized LOC102019577 NW_004955462 2824711 2834104 - 102019577 AGCD01049187;AGCD01049188;GBDJ01047276;XR_263091 MODEL 8749243 pseudo LOC102018383 E3 ubiquitin-protein ligase RNF13 pseudogene NW_004955472 5453123 5454314 + 102018383 AGCD01053579 MODEL 8982631 protein-coding Rpl23 ribosomal protein L23 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); transcription coactivator binding (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN cytoplasmic translation (ortholog); G1 to G0 transition (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN p53 signaling pathway; ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955451 13892880 13898079 - 102021074 AGCD01043513;GBCQ01007594;XM_005394288 XP_005394345 MODEL 8876912 trna Trnar-ucu transfer RNA arginine (anticodon UCU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955423;NW_004955511;NW_004955465;NW_004955468;NW_004955467 841104;4044405;13275754;10939794;8841103 841188;4044489;13275843;10939867;8841189 -;+;+;-;- 101978839 AGCD01023421;AGCD01050596;AGCD01051475;AGCD01052109;AGCD01066488 MODEL 8985295 protein-coding Wdr7 WD repeat domain 7 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN synaptic vesicle (ortholog) NW_004955402 41071895 41437717 + 102004341 AGCD01001008;AGCD01001009;AGCD01001010;AGCD01001011;AGCD01001012;AGCD01001013;AGCD01001014;AGCD01001015;GBDF01080343;XM_013510978;XM_013510979 XP_013366432;XP_013366433 MODEL 8837936 protein-coding Sgms2 sphingomyelin synthase 2 ENCODES a protein that exhibits ceramide cholinephosphotransferase activity (ortholog); ceramide phosphoethanolamine synthase activity (ortholog); phosphatidylcholine phospholipase C activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); ceramide phosphoethanolamine biosynthetic process (ortholog); regulation of bone mineralization (ortholog); ASSOCIATED WITH calvarial doughnut lesions with bone fragility (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); plasma membrane (ortholog) NW_004955496 1909347 1955004 - 102004618 AGCD01062261;GBCE01007641;XM_005406206;XM_005406207;XM_005406208;XM_005406209;XM_005406210;XM_005406211;XM_005406212;XM_013505416;XM_013505417 XP_005406263;XP_005406264;XP_005406265;XP_005406266;XP_005406267;XP_005406268;XP_005406269;XP_013360870;XP_013360871 MODEL 8793199 pseudo LOC102013371 40S ribosomal protein S3a pseudogene NW_004955451 12173170 12175229 - 102013371 AGCD01043377 MODEL 730469023 snorna SNORA40 Small nucleolar RNA SNORA40 10364396 protein-coding LOC106147484 collagen alpha-1(I) chain-like NW_004955567 744459 745214 + 106147484 AGCD01074429;GBBH01210980;XM_013509303 XP_013364757 MODEL 8950227 protein-coding Polr2h RNA polymerase II, I and III subunit H ENCODES a protein that exhibits single-stranded DNA binding (ortholog); INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase II (ortholog); transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleus (ortholog); protein-DNA complex (ortholog); RNA polymerase I complex (ortholog) NW_004955420 23132053 23136954 - 102017989 AGCD01021228;GBCQ01122427;XM_005383311 XP_005383368 MODEL 39131969 snorna SNORD81 Small nucleolar RNA SNORD81 8908763 protein-coding Psma6 proteasome 20S subunit alpha 6 ENCODES a protein that exhibits NF-kappaB binding (ortholog); RNA binding (ortholog); structural constituent of proteasome (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); myocardial infarction (ortholog); FOUND IN ciliary tip (ortholog); cytoplasm (ortholog); myofibril (ortholog) NW_004955409 25751578 25787533 - 102030047 AGCD01010134;AGCD01010135;AGCD01010136;AGCD01010137;AGCD01010138;GBDF01006465;XM_005376923;XM_005376924 XP_005376980;XP_005376981 MODEL 8789881 protein-coding Plpbp pyridoxal phosphate binding protein ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955463 13467965 13498544 + 102012515 AGCD01049867;AGCD01049868;AGCD01049869;GBCQ01038272;XM_005398413;XM_005398414 XP_005398470;XP_005398471 MODEL 8906626 pseudo LOC102022468 NHP2-like protein 1 pseudogene NW_004955408 13974627 13976107 - 102022468 AGCD01008379 MODEL 39131441 protein-coding TRDC T cell receptor delta constant 8860824 protein-coding Slc38a4 solute carrier family 38 member 4 ENCODES a protein that exhibits alanine:sodium symporter activity (ortholog); amino acid transmembrane transporter activity (ortholog); amino acid:sodium symporter activity (ortholog); INVOLVED IN L-alanine import across plasma membrane (ortholog); L-alanine transmembrane transport (ortholog); L-arginine transmembrane transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN microvillus membrane (ortholog); plasma membrane (ortholog) NW_004955500 5859566 5925084 - 102012776 AGCD01063858;AGCD01063859;AGCD01063860;AGCD01063861;GBCB01056315;XM_005406599;XM_005406600;XM_005406601;XM_013505723 XP_005406656;XP_005406657;XP_005406658;XP_013361177 MODEL 39133480 snrna U2 U2 spliceosomal RNA 8778180 protein-coding Rdh13 retinol dehydrogenase 13 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN eye photoreceptor cell development (ortholog); response to high light intensity (ortholog); retina layer formation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955567 1091636 1108648 + 102007379 AGCD01074459;AGCD01074460;GBBH01076835;XM_005413365;XM_005413366 XP_005413422;XP_005413423 MODEL 8985207 protein-coding Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); cell-cell junction organization (ortholog); cilium assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant polycystic kidney disease (ortholog); autosomal recessive polycystic kidney disease (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); apical plasma membrane (ortholog); centrosome (ortholog) NW_004955411 5988100 6434369 + 102003100 AGCD01011668;AGCD01011669;AGCD01011670;AGCD01011671;AGCD01011672;AGCD01011673;AGCD01011674;AGCD01011675;AGCD01011676;AGCD01011677;AGCD01011678;AGCD01011679;AGCD01011680;AGCD01011681;GBCQ01098601;GBCQ01098620;XM_013510899 XP_013366353 MODEL 730469555 snorna SNORA65 Small nucleolar RNA SNORA65 39133352 snrna U4 U4 spliceosomal RNA 8838219 ncrna LOC102011818 uncharacterized LOC102011818 NW_004955567 1491834 1498408 + 102011818 AGCD01074476;GBDK01309694;XR_001232411;XR_001232412 MODEL 730468941 snorna SNORA19 Small nucleolar RNA SNORA19 8892623 protein-coding Rasa3 RAS p21 protein activator 3 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN cellular response to heat (ortholog); platelet activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aplastic anemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog) NW_004955404 140906 225278 + 102026386 AGCD01003197;AGCD01003198;GBDI01126335;XM_005373923;XM_005373928;XM_013515439;XM_013515445;XM_013515454 XP_005373980;XP_005373985;XP_013370893;XP_013370899;XP_013370908 MODEL 8734318 pseudo LOC102012173 60S ribosomal protein L39 pseudogene NW_004955463 13487897 13488102 + 102012173 AGCD01049868;XM_005398412 MODEL 9019224 pseudo LOC102003174 transcription factor E2F6 pseudogene NW_004955437 13053465 13055563 + 102003174 AGCD01034639 MODEL 39131363 protein-coding C20orf204 chromosome 20 open reading frame 204 8914688 protein-coding Ppp1r3c protein phosphatase 1 regulatory subunit 3C ENCODES a protein that exhibits [phosphorylase] phosphatase activity (ortholog); enzyme binding (ortholog); glycogen binding (ortholog); INVOLVED IN glycogen biosynthetic process (ortholog); glycogen metabolic process (ortholog); regulation of glycogen biosynthetic process (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); prostate cancer (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN cytosol (ortholog); glycogen granule (ortholog) NW_004955425 1606069 1611001 + 102007916 AGCD01025235;AGCD01025236;GBDI01326617;XM_005385829 XP_005385886 MODEL 8803010 pseudo LOC102016422 tubulin alpha-1C chain-like NW_004955437 6993985 6999689 + 102016422 AGCD01034448 MODEL 8870333 ncrna LOC102010203 uncharacterized LOC102010203 NW_004955551 286892 305957 - 102010203 AGCD01072653;AGCD01072654;GBDK01406556;XR_001232275;XR_264923 MODEL 9067374 pseudo LOC102007478 ferritin light chain pseudogene NW_004955566 8758 10353 - 102007478 AGCD01074343;XM_005413274 MODEL 8792174 protein-coding Spink2 serine peptidase inhibitor Kazal type 2 INVOLVED IN acrosome assembly (ortholog); fertilization (ortholog); male germ cell proliferation (ortholog); ASSOCIATED WITH spermatogenic failure 29 (ortholog); uterine carcinosarcoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); neuron projection (ortholog) NW_004955447 14285248 14291835 + 102024175 AGCD01040998;GBDF01007420;XM_005392865 XP_005392922 MODEL 8913500 protein-coding Sema4d semaphorin 4D ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); semaphorin receptor binding (ortholog); INVOLVED IN bone trabecula morphogenesis (ortholog); leukocyte aggregation (ortholog); negative regulation of cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN extracellular region (ortholog); GABA-ergic synapse (ortholog); plasma membrane (ortholog) NW_004955515 2573816 2676387 + 102016085 AGCD01067257;AGCD01067258;AGCD01067259;GBCB01020045;GBCQ01041776;XM_005408875;XM_005408877 XP_005408932;XP_005408934 MODEL 8957539 protein-coding Sorbs2 sorbin and SH3 domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); cell growth involved in cardiac muscle cell development (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); dendrite (ortholog); neuronal cell body (ortholog) NW_004955403 23295887 23503654 + 102021196 AGCD01002242;AGCD01002243;AGCD01002244;AGCD01002245;AGCD01002246;GBBH01186974;XM_013512887;XM_013512888;XM_013512891;XM_013512898;XM_013512906 XP_013368341;XP_013368342;XP_013368345;XP_013368352;XP_013368360 MODEL 8852360 protein-coding LOC102005641 sialic acid-binding Ig-like lectin 13 NW_004955558 974508 988735 + 102005641 AGCD01073408;AGCD01073409;GBBH01177448;XM_013508883 XP_013364337 MODEL 8827158 ncrna LOC102006342 uncharacterized LOC102006342 NW_004955415 25402361 25405667 + 102006342 AGCD01016581;GBDF01097468;XR_260314 MODEL 8903401 protein-coding Tle1 TLE family member 1, transcriptional corepressor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of anoikis (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955530 1936936 2028803 + 102008658 AGCD01069903;AGCD01069904;GBBH01187430;GBCB01002607;XM_005410111;XM_005410112;XM_005410113;XM_005410114;XM_013507549 XP_005410168;XP_005410169;XP_005410170;XP_005410171;XP_013363003 MODEL 8724632 protein-coding LOC102008614 cytochrome c oxidase subunit 7A1, mitochondrial ENCODES a protein that exhibits cytochrome-c oxidase activity (ortholog); INVOLVED IN oxidative phosphorylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); dilated cardiomyopathy (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog); respiratory chain complex IV (ortholog) NW_004955468 2442819 2445169 + 102008614 AGCD01051817;GBCQ01010676;XM_005399919 XP_005399976 MODEL 8822371 protein-coding LOC102004210 uncharacterized LOC102004210 NW_004955445 12207949 12220949 + 102004210 AGCD01039744;AGCD01039745;XM_013518243 XP_013373697 MODEL 9009075 protein-coding Prmt2 protein arginine methyltransferase 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); histone H3 methyltransferase activity (ortholog); histone methyltransferase activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955407 42991305 43019332 + 102021733 AGCD01007902;GBDF01089964;XM_013505814 XP_013361268 MODEL 8783238 protein-coding Ptprf protein tyrosine phosphatase receptor type F ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); chondroitin sulfate proteoglycan binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN cell migration (ortholog); homophilic cell-cell adhesion (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH Aplasia or Hypoplasia of Breasts and/or Nipples 2 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endosome (ortholog); excitatory synapse (ortholog); growth cone (ortholog) NW_004955537 3096601 3185682 + 102029007 AGCD01070946;AGCD01070947;AGCD01070948;GBDI01341617;XM_005410662;XM_005410663;XM_005410664;XM_005410665;XM_005410670 XP_005410719;XP_005410720;XP_005410721;XP_005410722;XP_005410727 MODEL 8854492 ncrna LOC102010969 uncharacterized LOC102010969 NW_004955452 5395349 5427078 - 102010969 AGCD01044025;AGCD01044026;AGCD01044027;AGCD01044028;AGCD01044029;AGCD01044030;AGCD01044031;GBCB01057543;XR_001236120;XR_262656 MODEL 8776752 protein-coding Lpgat1 lysophosphatidylglycerol acyltransferase 1 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); 2-acylglycerophosphocholine O-acyltransferase activity (ortholog); lysophosphatidylethanolamine acyltransferase activity (ortholog); INVOLVED IN phosphatidylethanolamine acyl-chain remodeling (ortholog); positive regulation of fatty acid biosynthetic process (ortholog); triglyceride biosynthetic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955406 5441923 5506575 + 102024422 AGCD01005725;GBDF01084224;GBDJ01317991;XM_013520199 XP_013375653 MODEL 8798337 protein-coding Rnf139 ring finger protein 139 ENCODES a protein that exhibits protease binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-like protein transferase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of translation (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); renal cell carcinoma (ortholog); FOUND IN Derlin-1 retrotranslocation complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955540 3140649 3153546 + 102008664 AGCD01071335;GBCE01117033;XM_005410943 XP_005411000 MODEL 8740140 pseudo LOC102019921 heterogeneous nuclear ribonucleoprotein A3 pseudogene NW_004955420 2725878 2732123 + 102019921 AGCD01020607 MODEL 8943199 protein-coding LOC102004932 histone H2A type 1 NW_004955483 982626 983142 + 102004932 AGCD01057638;XM_013503792 XP_013359246 MODEL 39131435 protein-coding C21orf62 chromosome 21 open reading frame 62 8740003 ncrna LOC102011372 uncharacterized LOC102011372 NW_004955445 18244255 18269680 - 102011372 AGCD01039901;GBCQ01003080;XR_001235583;XR_001235584;XR_001235585;XR_001235586;XR_001235587;XR_001235588;XR_001235589;XR_001235590;XR_001235591;XR_001235592 MODEL 8805780 protein-coding Rhoa ras homolog family member A ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); alpha-beta T cell lineage commitment (ortholog); androgen receptor signaling pathway (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; E-cadherin signaling pathway; eicosanoid signaling pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); acute myocardial infarction (ortholog); alopecia (ortholog); FOUND IN apical junction complex (ortholog); axon (ortholog); cell cortex (ortholog) NW_004955532 1300821 1347453 - 102012473 AGCD01070177;AGCD01070178;AGCD01070179;GBDF01010839;XM_005410198;XM_005410200 XP_005410255;XP_005410257 MODEL 8740892 protein-coding LOC102009003 glutamate receptor ionotropic, NMDA 2C NW_004956136 343 7674 - 102009003 AGCD01079116;GBCQ01125682;XM_005415170 XP_005415227 MODEL 39132471 snorna SNORD82 Small nucleolar RNA SNORD82 8709536 ncrna LOC102022469 uncharacterized LOC102022469 NW_004955408 24472374 24475060 - 102022469 AGCD01008610;GBCE01106540;XR_001231905;XR_001231907 MODEL 8922919 protein-coding Slc38a5 solute carrier family 38 member 5 ENCODES a protein that exhibits alanine transmembrane transporter activity (ortholog); amino acid transmembrane transporter activity (ortholog); glycine transmembrane transporter activity (ortholog); INVOLVED IN amino acid export across plasma membrane (ortholog); amino acid import across plasma membrane (ortholog); asparagine transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Endotoxemia (ortholog); FOUND IN plasma membrane (ortholog) NW_004955543 15968 24644 - 102017059 AGCD01071554;GBCE01162641;XM_005415372 XP_005415429 MODEL 9047246 protein-coding Psma7 proteasome 20S subunit alpha 7 ENCODES a protein that exhibits identical protein binding (ortholog); structural constituent of proteasome (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); proteasome complex (ortholog) NW_004955528 1882397 1887811 + 102005631 AGCD01069575;GBDI01163625;GBDJ01371214;XM_005410038 XP_005410095 MODEL 9045840 protein-coding LOC102005986 cytochrome P450 2B6-like NW_004955642 41045 46562 - 102005986 AGCD01077714;AGCD01077715;GBBH01208704;XM_005415047 XP_005415104 MODEL 15036853 trna Trnas-acu transfer RNA serine (anticodon ACU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978841 8890081 protein-coding Rpl23a ribosomal protein L23a ENCODES a protein that exhibits large ribosomal subunit rRNA binding (ortholog); structural constituent of ribosome (ortholog); TORC2 complex binding (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) NW_004955481 4433367 4437838 - 102022598 AGCD01056938;GBDI01012741;XM_005402719 XP_005402776 MODEL 9024250 protein-coding Srsf12 serine and arginine rich splicing factor 12 INVOLVED IN mRNA 5'-splice site recognition (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway NW_004955411 15851482 15918864 - 102017108 AGCD01011954;AGCD01011955;AGCD01011956;AGCD01011957;AGCD01011958;AGCD01011959;GBDF01042758;XM_013510715 XP_013366169 MODEL 8908293 protein-coding Sgo1 shugoshin 1 ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); centriole-centriole cohesion (ortholog); chromosome segregation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog) NW_004955430 12200601 12216845 - 102006155 AGCD01029489;AGCD01029490;GBDF01279460;XM_005387467;XM_005387468;XM_013515668;XM_013515669 XP_005387524;XP_005387525;XP_013371122;XP_013371123 MODEL 9015286 protein-coding Wdr70 WD repeat domain 70 ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN spliceosomal complex (ortholog); U2-type catalytic step 1 spliceosome (ortholog) NW_004955426 22062872 22344596 + 102016728 AGCD01026604;AGCD01026605;AGCD01026606;AGCD01026607;AGCD01026608;AGCD01026609;AGCD01026610;AGCD01026611;AGCD01026612;AGCD01026613;AGCD01026614;AGCD01026615;AGCD01026616;GBDF01125379;XM_013514960;XM_013514961 XP_013370414;XP_013370415 MODEL 8861500 protein-coding Rdh14 retinol dehydrogenase 14 ENCODES a protein that exhibits 11-cis-retinol dehydrogenase (NADP+) activity (ortholog); alcohol dehydrogenase (NADP+) activity (ortholog); all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN retinol metabolic process (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); nucleoplasm (ortholog) NW_004955469 1281391 1287334 - 102009593 AGCD01052251;GBCQ01066491;XM_005400336 XP_005400393 MODEL 8943708 ncrna LOC102013376 uncharacterized LOC102013376 NW_004955453 7378233 7386961 + 102013376 AGCD01044743;GBDF01180127;XR_262716 MODEL 9033119 protein-coding Rasa4b RAS p21 protein activator 4B ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955456 15114525 15143493 + 102012611 AGCD01046662;GBDI01067417;XM_005396825;XM_005396826;XM_013520629;XM_013520630;XM_013520631;XM_013520632;XM_013520633;XR_001236353;XR_001236354 XP_005396882;XP_005396883;XP_013376083;XP_013376084;XP_013376085;XP_013376086;XP_013376087 MODEL 9055027 pseudo LOC102011820 kelch repeat and BTB domain-containing protein 2 pseudogene NW_004955446 5926616 5937581 - 102011820 AGCD01040081 MODEL 8770323 protein-coding LOC102012181 G2/mitotic-specific cyclin-B1-like NW_004955413 26407831 26409562 - 102012181 AGCD01014441;XM_013511379 XP_013366833 MODEL 39133742 snorna SNORD115 Small nucleolar RNA SNORD115 9057826 protein-coding Erc2 ELKS/RAB6-interacting/CAST family member 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein-containing complex binding (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN regulation of calcium-dependent activation of synaptic vesicle fusion (ortholog); regulation of presynaptic cytosolic calcium ion concentration (ortholog); synapse organization (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); Golgi-associated vesicle (ortholog) NW_004955430 5345191 6308909 - 102008018 AGCD01029260;AGCD01029261;AGCD01029262;AGCD01029263;AGCD01029264;AGCD01029265;AGCD01029266;AGCD01029267;AGCD01029268;AGCD01029269;AGCD01029270;AGCD01029271;AGCD01029272;AGCD01029273;AGCD01029274;AGCD01029275;AGCD01029276;AGCD01029277;AGCD01029278;AGCD01029279;AGCD01029280;AGCD01029281;AGCD01029282;AGCD01029283;AGCD01029284;AGCD01029285;GBDI01215309;XM_005387385;XM_005387388;XM_013515684;XM_013515685;XM_013515686;XM_013515687;XM_013515688;XM_013515689;XM_013515690;XR_001234567 XP_005387442;XP_005387445;XP_013371138;XP_013371139;XP_013371140;XP_013371141;XP_013371142;XP_013371143;XP_013371144 MODEL 8863334 ncrna LOC102016427 uncharacterized LOC102016427 NW_004955442 4388403 4394267 - 102016427 AGCD01037526;GBDF01208690;XR_262113 MODEL 8762323 ncrna LOC102019579 uncharacterized LOC102019579 NW_004955464 1398380 1406201 + 102019579 AGCD01049949;GBDK01036642;XR_263190 MODEL 8791806 protein-coding Polr2i RNA polymerase II subunit I INVOLVED IN transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II, core complex (ortholog) NW_004955468 2494120 2495578 + 102009928 AGCD01051823;GBDI01059799;XM_005399922 XP_005399979 MODEL 8832485 protein-coding LOC102018388 zinc finger protein 791-like NW_004955415 33148948 33168071 - 102018388 AGCD01016753;AGCD01016754;GBDF01124083;XM_005381109;XM_005381111;XM_013512175;XM_013512176 XP_005381166;XP_005381168;XP_013367629;XP_013367630 MODEL 9021666 protein-coding Trdmt1 tRNA aspartic acid methyltransferase 1 ENCODES a protein that exhibits tRNA (cytidine-N5)-methyltransferase activity (ortholog); tRNA methyltransferase activity (ortholog); INVOLVED IN response to amphetamine (ortholog); tRNA methylation (ortholog); tRNA modification (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955429 10741512 10774268 + 102028115 AGCD01028679;GBCE01009529;XM_005386963;XM_005386964 XP_005387020;XP_005387021 MODEL 8872080 protein-coding LOC102007481 UDP-glucuronosyltransferase 2A3-like NW_004955447 3273792 3279756 + 102007481 AGCD01040590;GBDF01017429;GBDF01017432;XM_013518565 XP_013374019 MODEL 39133481 snrna U2 U2 spliceosomal RNA 39132457 snorna SNORD82 Small nucleolar RNA SNORD82 39133353 snrna U4 U4 spliceosomal RNA 8920015 protein-coding Pkhd1l1 PKHD1 like 1 INVOLVED IN sensory perception of sound (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive nonsyndromic deafness 124 (ortholog); esophageal cancer (ortholog); FOUND IN stereocilium coat (ortholog); stereocilium tip (ortholog) NW_004955417 16776674 16923058 + 102023805 AGCD01018273;AGCD01018274;AGCD01018275;AGCD01018276;AGCD01018277;GBCE01024956;XM_005381882;XM_013512746 XP_005381939;XP_013368200 MODEL 626189194 snorna SNORA19 Small nucleolar RNA SNORA19 8774901 ncrna LOC102003180 uncharacterized LOC102003180 NW_004955547 143678 152995 + 102003180 AGCD01072134;GBBH01161629;XR_264896 MODEL 8950652 protein-coding Sorbs3 sorbin and SH3 domain containing 3 ENCODES a protein that exhibits vinculin binding (ortholog); INVOLVED IN cell-substrate adhesion (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); nucleus (ortholog) NW_004955403 45973381 46003807 + 102009004 AGCD01002845;AGCD01002846;AGCD01002847;GBBH01031911;XM_005373666;XM_005373668;XM_005373669;XM_005373670;XM_005373671;XM_005373674;XM_005373675;XM_005373676;XM_013513844;XM_013513847 XP_005373723;XP_005373725;XP_005373726;XP_005373727;XP_005373728;XP_005373731;XP_005373732;XP_005373733;XP_013369298;XP_013369301 MODEL 8791738 pseudo LOC102008247 anaphase-promoting complex subunit 7 pseudogene NW_004955430 15868219 15872040 - 102008247 AGCD01029620 MODEL 8898080 protein-coding Rspo1 R-spondin 1 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); heparin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN male meiotic nuclear division (ortholog); negative regulation of eating behavior (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH genetic disease (ortholog); lung cancer (ortholog); obesity (ortholog); FOUND IN extracellular region (ortholog); nucleus (ortholog) NW_004955452 15415417 15435616 - 102012602 AGCD01044486;GBDK01265544;XM_005395212;XM_005395213 XP_005395269;XP_005395270 MODEL 9061502 pseudo LOC102010970 dnaJ homolog subfamily B member 6-like NW_004955452 1116250 1116893 - 102010970 AGCD01043831 MODEL 8932735 protein-coding Phlda1 pleckstrin homology like domain family A member 1 INVOLVED IN forebrain neuron differentiation (ortholog); glycoprotein biosynthetic process (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); atrial fibrillation (ortholog); cognitive disorder (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); nucleolus (ortholog) NW_004955405 15318785 15321316 - 102010219 AGCD01004942;AGCD01004943;GBCE01084948;XM_005374337 XP_005374394 MODEL 8926968 ncrna LOC102019922 uncharacterized LOC102019922 NW_004955421 21691485 21692961 + 102019922 AGCD01022115;GBDF01236999;XR_260803;XR_260804 MODEL 8851735 protein-coding Rasal1 RAS protein activator like 1 INVOLVED IN positive regulation of dendrite extension (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955482 9447984 9471852 - 102013722 AGCD01057570;AGCD01057571;GBBH01069782;GBCQ01151933;XM_013503712 XP_013359166 MODEL 8880724 protein-coding Plpp1 phospholipid phosphatase 1 ENCODES a protein that exhibits ceramide-1-phosphate phosphatase activity (ortholog); diacylglycerol diphosphate phosphatase activity (ortholog); lipid phosphatase activity (ortholog); INVOLVED IN ceramide metabolic process (ortholog); phospholipid catabolic process (ortholog); phospholipid dephosphorylation (ortholog); PARTICIPATES IN D-glycericacidemia pathway; Fabry disease pathway; familial lipoprotein lipase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Disease Progression (ortholog); FOUND IN apical plasma membrane (ortholog); caveola (ortholog); membrane (ortholog) NW_004955446 12201678 12279992 + 102018446 AGCD01040227;AGCD01040228;GBCC01038817;GBDF01046744;XM_013518405 XP_013373859 MODEL 9015159 protein-coding LOC102011373 zinc finger protein 664-like NW_004955569 341373 356350 + 102011373 AGCD01074574;AGCD01074575;XM_005413508 XP_005413565 MODEL 9066198 ncrna LOC102009007 uncharacterized LOC102009007 NW_004955404 50480603 50488989 + 102009007 AGCD01004531;GBDF01057260;XR_259345 MODEL 8731158 protein-coding LOC102022471 olfactory receptor 6C2 NW_004955458 2877948 2878895 + 102022471 AGCD01047255;XM_005397503 XP_005397560 MODEL 150537116 snorna SNORA65 Small nucleolar RNA SNORA65 730469029 snorna SNORA40 Small nucleolar RNA SNORA40 9007688 protein-coding LOC102006343 cystatin-C-like NW_004955415 30580664 30583924 - 102006343 AGCD01016666;GBDF01051588;XM_005380974;XR_001233254 XP_005381031 MODEL 8868414 protein-coding Tle2 TLE family member 2, transcriptional corepressor ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear body (ortholog) NW_004955495 5347496 5366743 + 102026761 AGCD01062002;GBBH01012059;GBDI01296754;XM_013505226 XP_013360680 MODEL 8855451 protein-coding Psma8 proteasome 20S subunit alpha 8 INVOLVED IN meiotic cell cycle (ortholog); proteasomal protein catabolic process (ortholog); regulation of meiosis I (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN nucleus (ortholog); spermatoproteasome complex (ortholog) NW_004955402 14230119 14278987 + 102013668 AGCD01000422;AGCD01000423;GBDF01088864;XM_005372729 XP_005372786 MODEL 8842163 protein-coding Rpl24 ribosomal protein L24 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); exit from mitosis (ortholog); optic nerve development (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); gastrointestinal stromal tumor (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955427 3201173 3204516 - 102004300 AGCD01026924;AGCD01026925;XM_013515048 XP_013370502 MODEL 9064216 ncrna LOC102004211 uncharacterized LOC102004211 NW_004955574 1056116 1065039 + 102004211 AGCD01075147;AGCD01075148;GBDF01127794;XR_265063 MODEL 10282773 protein-coding LOC106147485 uncharacterized LOC106147485 NW_004955567 428690 441840 - 106147485 AGCD01074404;GBDK01233099;XM_013509305;XM_013509306;XM_013509307 XP_013364759;XP_013364760;XP_013364761 MODEL 730469458 snorna SNORA65 Small nucleolar RNA SNORA65 39133355 snrna U4 U4 spliceosomal RNA 9059391 protein-coding Wdr72 WD repeat domain 72 INVOLVED IN ameloblast differentiation (ortholog); amelogenesis (ortholog); enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta hypomaturation type 2A3 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); endosome (ortholog) NW_004955409 1451506 1631976 + 102016672 AGCD01009176;AGCD01009177;AGCD01009178;AGCD01009179;AGCD01009180;GBCQ01031346;XM_005376626;XM_013510272;XM_013510273;XM_013510274 XP_005376683;XP_013365726;XP_013365727;XP_013365728 MODEL 8739944 protein-coding Prmt3 protein arginine methyltransferase 3 ENCODES a protein that exhibits histone H4R3 methyltransferase activity (ortholog); methyltransferase activity (ortholog); modified amino acid binding (ortholog); INVOLVED IN dendritic spine morphogenesis (ortholog); negative regulation of protein ubiquitination (ortholog); negative regulation of retinoic acid biosynthetic process (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955476 1222579 1331582 + 102006767 AGCD01055203;AGCD01055204;GBBH01149628;GBDJ01388986;XM_005401723 XP_005401780 MODEL 8820091 protein-coding Ptprg protein tyrosine phosphatase receptor type G ENCODES a protein that exhibits identical protein binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN negative regulation of epithelial cell migration (ortholog); negative regulation of neuron projection development (ortholog); regulation of homophilic cell adhesion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955517 3676342 4352909 - 102003052 AGCD01067669;AGCD01067670;AGCD01067671;AGCD01067672;AGCD01067673;AGCD01067674;AGCD01067675;AGCD01067676;AGCD01067677;AGCD01067678;AGCD01067679;AGCD01067680;AGCD01067681;AGCD01067682;AGCD01067683;AGCD01067684;AGCD01067685;AGCD01067686;AGCD01067687;AGCD01067688;AGCD01067689;GBDF01090393;GBDF01090403;XM_013506946 XP_013362400 MODEL 8838226 pseudo LOC102012184 U1 small nuclear ribonucleoprotein A pseudogene NW_004955413 587042 587756 + 102012184 AGCD01013481 MODEL 8978239 protein-coding LOC102004934 uncharacterized LOC102004934 NW_004955419 19866435 19869461 + 102004934 AGCD01020220;GBDF01239719;XM_005382936 XP_005382993 MODEL 8936517 protein-coding C2cd2 C2 calcium dependent domain containing 2 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955407 39627435 39665156 + 102021097 AGCD01007832;GBBH01214687;GBDJ01064517;XM_013505230 XP_013360684 MODEL 9067969 protein-coding Lpin1 lipin 1 ENCODES a protein that exhibits histone deacetylase binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); phosphatidate phosphatase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); animal organ regeneration (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Acute Recurrent Myoglobinuria, Autosomal Recessive (ortholog); Cachexia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955487 6139188 6207316 + 102008002 AGCD01059358;AGCD01059359;AGCD01059360;AGCD01059361;AGCD01059362;GBCB01006082;XM_005404433;XM_005404434;XM_005404435 XP_005404490;XP_005404491;XP_005404492 MODEL 8979326 protein-coding Rhob ras homolog family member B ENCODES a protein that exhibits GDP binding (ortholog); INVOLVED IN cell adhesion (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to ionizing radiation (ortholog); ASSOCIATED WITH Avian Sarcoma (ortholog); breast cancer (ortholog); cerebral palsy (ortholog); FOUND IN cleavage furrow (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955469 2964968 2966998 + 102015099 AGCD01052289;GBCB01076295;GBCQ01002704;XM_005400352 XP_005400409 MODEL 8872807 protein-coding Spink4 serine peptidase inhibitor Kazal type 4 INVOLVED IN response to xenobiotic stimulus (ortholog); ASSOCIATED WITH melanoma (ortholog) NW_004955472 2406279 2415668 - 102010471 AGCD01053459;AGCD01053460;GBDI01140848;XM_005401107;XM_013522954 XP_005401164;XP_013378408 MODEL 8886486 protein-coding Polr2j RNA polymerase II subunit J ENCODES a protein that exhibits LRR domain binding (ortholog); INVOLVED IN transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II, core complex (ortholog) NW_004955456 15146713 15151320 + 102014745 AGCD01046662;GBDI01007145;XM_005396834 XP_005396891 MODEL 8758239 protein-coding Slc38a6 solute carrier family 38 member 6 ENCODES a protein that exhibits L-glutamate transmembrane transporter activity (ortholog); L-glutamine transmembrane transporter activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955466 8626193 8679764 - 102014433 AGCD01050995;AGCD01050996;AGCD01050997;GBDI01324016;XM_005399168;XM_005399169;XM_013521932;XM_013521933 XP_005399225;XP_005399226;XP_013377386;XP_013377387 MODEL 8952678 protein-coding LOC102008615 zinc finger protein 792 NW_004955468 4295637 4302563 - 102008615 AGCD01051905;GBCQ01021284;XM_013522370;XM_013522371;XM_013522372;XM_013522373 XP_013377824;XP_013377825;XP_013377826;XP_013377827 MODEL 8742095 ncrna LOC102009009 uncharacterized LOC102009009 NW_004955452 14645767 14677079 + 102009009 AGCD01044474;AGCD01044475;AGCD01044476;GBDF01115467;XR_001236027 MODEL 8817378 ncrna LOC102013385 uncharacterized LOC102013385 NW_004955456 7020296 7021629 + 102013385 AGCD01046384;GBDF01208136;XR_262885 MODEL 39133743 snorna SNORD115 Small nucleolar RNA SNORD115 9021221 protein-coding LOC102011821 putative olfactory receptor 2B8 NW_004955576 1362244 1363185 + 102011821 AGCD01075374;XM_005413954 XP_005414011 MODEL 9027502 protein-coding Sorcs1 sortilin related VPS10 domain containing receptor 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease 6 (ortholog); lung cancer (ortholog); FOUND IN membrane (ortholog) NW_004955485 3719006 4222143 + 102020807 AGCD01058546;AGCD01058547;AGCD01058548;AGCD01058549;AGCD01058550;AGCD01058551;AGCD01058552;AGCD01058553;AGCD01058554;AGCD01058555;AGCD01058556;GBBH01078182;XM_013504127 XP_013359581 MODEL 8715752 protein-coding Rspo2 R-spondin 2 ENCODES a protein that exhibits heparin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN bone mineralization (ortholog); dopaminergic neuron differentiation (ortholog); embryonic forelimb morphogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); Humerofemoral Hypoplasia with Radiotibial Ray Deficiency (ortholog); lung cancer (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) NW_004955417 30643554 30704497 - 102023033 AGCD01018628;GBDK01061470;XM_005382000 XP_005382057 MODEL 8769250 protein-coding Sema4f ssemaphorin 4F INVOLVED IN axon guidance (ortholog); negative regulation of axon extension (ortholog); retinal ganglion cell axon guidance (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955424 11123326 11152909 - 102020136 AGCD01024549;AGCD01024550;GBDK01316796;XM_005385478;XM_005385479;XM_005385480;XM_005385481 XP_005385535;XP_005385536;XP_005385537;XP_005385538 MODEL 8729758 pseudo LOC102018393 U3 small nucleolar RNA-associated protein 15 homolog NW_004955416 25347769 25351583 - 102018393 AGCD01017587 MODEL 9014010 protein-coding Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ENCODES a protein that exhibits 3' overhang single-stranded DNA endonuclease activity (ortholog); damaged DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cell development (ortholog); cell population proliferation (ortholog); chromosome organization (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); ERCC4-ERCC1 complex (ortholog) NW_004955555 2393510 2430180 - 102012252 AGCD01073149;AGCD01073150;AGCD01073151;AGCD01073152;AGCD01073153;GBCB01023844;XM_005412522;XM_005412523;XM_005412524;XM_013508709;XM_013508710 XP_005412579;XP_005412580;XP_005412581;XP_013364163;XP_013364164 MODEL 8705710 protein-coding LOC102005997 keratin-associated protein 20-2-like NW_004955407 30123405 30123560 + 102005997 AGCD01007628;XM_005375637 XP_005375694 MODEL 8702201 pseudo LOC102005642 T-complex protein 1 subunit theta pseudogene NW_004955443 13804351 13806658 - 102005642 AGCD01038484 MODEL 8931798 trna Trnas-aga transfer RNA serine (anticodon AGA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978802 AGCD01018131;AGCD01050593;AGCD01050595;AGCD01050596;AGCD01051466;AGCD01057629 MODEL 39132715 snorna SNORD83 Small nucleolar RNA SNORD83 8769002 protein-coding Ppp1r3d protein phosphatase 1 regulatory subunit 3D ENCODES a protein that exhibits enzyme binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN regulation of glycogen biosynthetic process (ortholog); regulation of glycogen catabolic process (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; glycogen biosynthetic pathway; glycogen degradation pathway; FOUND IN glycogen granule (ortholog) NW_004955528 3804557 3807309 + 102014282 AGCD01069611;GBBH01225092;XM_013507523 XP_013362977 MODEL 730469211 snorna SNORA40 Small nucleolar RNA SNORA40 8855920 protein-coding Sgo2 shugoshin 2 INVOLVED IN female meiotic nuclear division (ortholog); intracellular protein localization (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog); kinetochore (ortholog) NW_004955403 879354 905605 - 102005871 AGCD01001709;AGCD01001710;AGCD01001711;GBDF01051842;XM_005373247;XM_005373248;XM_013511911 XP_005373304;XP_005373305;XP_013367365 MODEL 8995680 pseudo LOC102010208 protein kinase C iota type pseudogene NW_004955446 317633 321748 - 102010208 AGCD01039938;XM_005392595 MODEL 8914239 protein-coding Lpin2 lipin 2 ENCODES a protein that exhibits phosphatidate phosphatase activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); triglyceride biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chediak-Higashi syndrome (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955402 7457408 7505829 + 102016763 AGCD01000175;GBCQ01033663;XM_005372657;XM_005372661 XP_005372714;XP_005372718 MODEL 8726565 protein-coding LOC102003182 protamine-2 NW_004955442 7306731 7307449 + 102003182 AGCD01037623;GBDF01007122;XM_005391168 XP_005391225 MODEL 8875141 protein-coding Rnf14 ring finger protein 14 ENCODES a protein that exhibits nuclear androgen receptor binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-like protein transferase activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); protein K6-linked ubiquitination (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955415 11797287 11826936 - 102028957 AGCD01016176;AGCD01016177;AGCD01016178;GBBH01061472;GBDF01087296;XM_013512340 XP_013367794 MODEL 8942368 pseudo LOC102016428 high mobility group protein B2 pseudogene NW_004955442 15397676 15398555 - 102016428 AGCD01037870 MODEL 10345860 ncrna LOC106147487 uncharacterized LOC106147487 NW_004955567 817228 820682 + 106147487 AGCD01074433;AGCD01074434;GBDF01016436;XR_001232414;XR_001232415;XR_001232416;XR_001232417 MODEL 9017232 protein-coding Psmb1 proteasome 20S subunit beta 1 ENCODES a protein that exhibits structural constituent of proteasome (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, HYPOTONIA, AND ABSENT LANGUAGE (ortholog); osteoarthritis (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955411 3285610 3304210 + 102015387 AGCD01011545;GBDF01010051;XM_005377618;XM_005377619 XP_005377675;XP_005377676 MODEL 8944462 protein-coding LOC102004212 cytochrome P450 2F3 ENCODES a protein that exhibits monooxygenase activity (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen (ortholog); INVOLVED IN naphthalene catabolic process (ortholog); response to toxic substance (ortholog); trichloroethylene metabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Experimental Liver Neoplasms (ortholog); hepatocellular carcinoma (ortholog) NW_004955578 530094 541951 + 102004212 AGCD01075488;GBCQ01007573;XM_005414015 XP_005414072 MODEL 8991337 protein-coding Trdn triadin ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); endoplasmic reticulum membrane organization (ortholog); heart contraction (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); cardiovascular system disease (ortholog); catecholaminergic polymorphic ventricular tachycardia (ortholog); FOUND IN calcium channel complex (ortholog); junctional membrane complex (ortholog); junctional sarcoplasmic reticulum membrane (ortholog) NW_004955436 4963945 5266727 - 102027896 AGCD01033674;AGCD01033675;AGCD01033676;AGCD01033677;GBDI01303360;XM_005389153 XP_005389210 MODEL 8720110 protein-coding Rdh5 retinol dehydrogenase 5 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); androstan-3-alpha,17-beta-diol dehydrogenase (NAD+) activity (ortholog); androsterone dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN retinoid metabolic process (ortholog); steroid metabolic process (ortholog); PARTICIPATES IN retinoid cycle metabolic pathway; ASSOCIATED WITH Congenital Abnormalities (ortholog); fundus albipunctatus (ortholog); myopia (ortholog); FOUND IN cell body (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955458 3356324 3361701 + 102020090 AGCD01047296;GBDI01078451;XM_005397255;XM_005397256;XM_005397257 XP_005397312;XP_005397313;XP_005397314 MODEL 8979419 protein-coding LOC102019580 serpin B9-like NW_004955465 10259941 10270945 + 102019580 AGCD01050506;GBDI01306837;XM_005398910;XM_013521828;XM_013521829 XP_005398967;XP_013377282;XP_013377283 MODEL 8974001 protein-coding LOC102012188 vomeronasal type-1 receptor 90-like NW_004955414 14997711 14998679 - 102012188 AGCD01015167;XM_005380441 XP_005380498 MODEL 8884158 protein-coding Rasal2 RAS protein activator like 2 INVOLVED IN adipose tissue development (ortholog); gene expression (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955406 17602584 17904611 + 102020977 AGCD01006012;AGCD01006013;AGCD01006014;AGCD01006015;AGCD01006016;GBDF01123106;XM_005374920;XM_005374922;XM_005374926;XM_005374927;XM_013521024;XM_013521034;XM_013521035;XM_013521039;XM_013521043;XM_013521052 XP_005374977;XP_005374979;XP_005374983;XP_005374984;XP_013376478;XP_013376488;XP_013376489;XP_013376493;XP_013376497;XP_013376506 MODEL 8773270 protein-coding Srsf2 serine and arginine rich splicing factor 2 ENCODES a protein that exhibits pre-mRNA binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); response to vitamin E (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN interchromatin granule (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955506 5569280 5572164 + 102017685 AGCD01065373;AGCD01065374;GBDK01018068;XM_013506028 XP_013361482 MODEL 9027148 pseudo LOC102007484 arylacetamide deacetylase-like 2 pseudogene NW_004955448 3318723 3319795 - 102007484 AGCD01041327 MODEL 39133482 snrna U2 U2 spliceosomal RNA 8896472 protein-coding LOC102011379 histone H2B type 1-B-like NW_004955581 88920 89732 + 102011379 AGCD01075657;XM_005414228 XP_005414285 MODEL 8981151 pseudo LOC102022476 protein sprouty homolog 4-like NW_004955460 12524558 12531163 - 102022476 AGCD01048659 MODEL 8898684 protein-coding C2cd2l C2CD2 like ENCODES a protein that exhibits insulin binding (ortholog); phosphatidylinositol binding (ortholog); phosphatidylinositol transfer activity (ortholog); INVOLVED IN positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); cytoplasmic side of apical plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955412 20214915 20232260 + 102026620 AGCD01012997;AGCD01012998;AGCD01012999;GBBH01060462;GBDF01279346;XM_005378305;XM_013511211 XP_005378362;XP_013366665 MODEL 730469406 snorna SNORA19 Small nucleolar RNA SNORA19 8902238 protein-coding LOC102006347 syncytin-1-like NW_004955417 31573854 31588270 + 102006347 AGCD01018657;GBDF01112288;GBDK01015773;XM_005381976;XM_013512777 XP_005382033;XP_013368231 MODEL 8958132 protein-coding Rhobtb1 Rho related BTB domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955425 14299128 14366732 - 102017254 AGCD01025558;AGCD01025559;GBDI01355365;XM_005385941;XM_005385942;XM_013514879 XP_005385998;XP_005385999;XP_013370333 MODEL 9010934 protein-coding LOC102008619 E3 ISG15--protein ligase HERC5-like NW_004955474 12020037 12065002 - 102008619 AGCD01054645;AGCD01054646;GBBH01011708;GBCE01069694;XM_013502751 XP_013358205 MODEL 8767137 protein-coding Rpl26 ribosomal protein L26 ENCODES a protein that exhibits mRNA 5'-UTR binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); cellular response to ionizing radiation (ortholog); cellular response to UV (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH cervical cancer (ortholog); Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 11 (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) NW_004955467 8519760 8525514 + 102018071 AGCD01051452;GBCE01002403;XM_005399411 XP_005399468 MODEL 8741546 ncrna LOC102010975 uncharacterized LOC102010975 NW_004955457 7328755 7340258 + 102010975 AGCD01046876;GBDF01145843;XR_262928 MODEL 39133354 snorna SNORA66 Small nucleolar RNA SNORA66 39133359 snrna U4 U4 spliceosomal RNA 39131962 snorna SNORD116 Small nucleolar RNA SNORD116 8957829 pseudo LOC102004938 40S ribosomal protein S14 pseudogene NW_004955421 13418076 13419433 + 102004938 AGCD01021946 MODEL 9049218 protein-coding Wdr73 WD repeat domain 73 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); nucleus organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Athetosis (ortholog); cervical cancer (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955416 14471479 14485416 + 102012643 AGCD01017270;AGCD01017271;GBCB01039745;XM_005381498 XP_005381555 MODEL 9051638 protein-coding Ptprh protein tyrosine phosphatase receptor type H ENCODES a protein that exhibits cadherin binding (ortholog); protein tyrosine phosphatase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); microvillus (ortholog) NW_004955567 992880 1018343 + 102024391 AGCD01074450;AGCD01074451;AGCD01074452;AGCD01074453;GBDK01387246;XM_013509243;XM_013509244;XM_013509245;XR_001232403 XP_013364697;XP_013364698;XP_013364699 MODEL 8801141 protein-coding Sorcs2 sortilin related VPS10 domain containing receptor 2 INVOLVED IN intracellular protein transport (ortholog); long-term synaptic depression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); early endosome membrane (ortholog); perikaryon (ortholog) NW_004955514 3053127 3390125 - 102008341 AGCD01067092;AGCD01067093;AGCD01067094;GBBH01141459;GBDJ01136170;XM_005408856 XP_005408913 MODEL 8752967 pseudo LOC102012190 heat shock factor-binding protein 1 pseudogene NW_004955415 16038711 16039206 + 102012190 AGCD01016366;XM_005380832 MODEL 8705978 protein-coding Pkia cAMP-dependent protein kinase inhibitor alpha ENCODES a protein that exhibits cAMP-dependent protein kinase inhibitor activity (ortholog); protein kinase A catalytic subunit binding (ortholog); INVOLVED IN negative regulation of cAMP/PKA signal transduction (ortholog); negative regulation of protein import into nucleus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955444 2498785 2532881 - 102013561 AGCD01038768;GBDK01234704;XM_005392066;XM_005392067;XM_013518200 XP_005392123;XP_005392124;XP_013373654 MODEL 8901152 trna Trnas-cga transfer RNA serine (anticodon CGA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955501;NW_004955465;NW_004955465;NW_004955467 1580746;13301831;13138748;8814367 1580827;13301912;13138829;8814448 +;-;+;+ 101978805 AGCD01050590;AGCD01050597;AGCD01051472;AGCD01064055 MODEL 8793967 ncrna LOC102009015 uncharacterized LOC102009015 NW_004955407 17180370 17193372 + 102009015 AGCD01007241;XR_259563 MODEL 8738033 protein-coding Sgpl1 sphingosine-1-phosphate lyase 1 ENCODES a protein that exhibits sphinganine-1-phosphate aldolase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); apoptotic signaling pathway (ortholog); ceramide metabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955437 20489641 20547105 - 102009318 AGCD01034874;AGCD01034875;AGCD01034876;AGCD01034877;GBCE01031815;XM_005390043;XM_013517017 XP_005390100;XP_013372471 MODEL 8814360 protein-coding Phlda2 pleckstrin homology like domain family A member 2 INVOLVED IN animal organ morphogenesis (ortholog); carbohydrate storage (ortholog); placenta development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); lung non-small cell carcinoma (ortholog); osteosarcoma (ortholog) NW_004955422 14617794 14619595 - 102011671 AGCD01022861;GBDJ01182328;XM_005384213 XP_005384270 MODEL 8934244 pseudo LOC102019925 60S ribosomal protein L15-like NW_004955494 2720745 2723079 + 102019925 AGCD01061448 MODEL 8753680 protein-coding Ppp1r3e protein phosphatase 1 regulatory subunit 3E ENCODES a protein that exhibits [phosphorylase] phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN positive regulation of glycogen biosynthetic process (ortholog); regulation of glycogen biosynthetic process (ortholog); regulation of glycogen catabolic process (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; FOUND IN glycogen granule (ortholog) NW_004955409 37016851 37025125 + 102022055 AGCD01010488;AGCD01010489;GBDF01113415;XM_013510438;XM_013510439 XP_013365892;XP_013365893 MODEL 8939384 protein-coding Rnf141 ring finger protein 141 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH stomach cancer (ortholog); thymoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955414 26117073 26144845 - 102007108 AGCD01015638;GBCB01025783;XM_005380280;XM_005380281;XM_005380282 XP_005380337;XP_005380338;XP_005380339 MODEL 8764093 protein-coding Prmt5 protein arginine methyltransferase 5 ENCODES a protein that exhibits chromatin binding (ortholog); E-box binding (ortholog); histone H2AR3 methyltransferase activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); chromatin remodeling (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN histone modification pathway; homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955409 37369507 37378034 + 102028833 AGCD01010511;GBDF01049663;XM_005377107;XM_005377109;XM_005377110 XP_005377164;XP_005377166;XP_005377167 MODEL 8873736 pseudo LOC102016431 prefoldin subunit 4 pseudogene NW_004955443 6937105 6937491 - 102016431 AGCD01038268 MODEL 8866111 protein-coding Plpp2 phospholipid phosphatase 2 ENCODES a protein that exhibits ceramide-1-phosphate phosphatase activity (ortholog); phosphatidate phosphatase activity (ortholog); sphingosine-1-phosphate phosphatase activity (ortholog); INVOLVED IN ceramide metabolic process (ortholog); phospholipid dephosphorylation (ortholog); phospholipid metabolic process (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN caveola (ortholog); early endosome (ortholog); early endosome membrane (ortholog) NW_004955495 7307079 7310898 + 102027996 AGCD01062130;GBCB01088570;GBDJ01189155;XM_005406052 XP_005406109 MODEL 10284868 ncrna LOC106147488 uncharacterized LOC106147488 NW_004955567 1119931 1121246 + 106147488 AGCD01074460;XR_001232418 MODEL 9004067 protein-coding Psmb10 proteasome 20S subunit beta 10 INVOLVED IN cell morphogenesis (ortholog); T cell proliferation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); human immunodeficiency virus infectious disease (ortholog); immunodeficiency 121 (ortholog); FOUND IN proteasome complex (ortholog); proteasome core complex (ortholog); spermatoproteasome complex (ortholog) NW_004955484 8777618 8780393 + 102019175 AGCD01058396;GBDJ01009560;XM_005403610;XM_005403611;XM_005403612 XP_005403667;XP_005403668;XP_005403669 MODEL 8927299 protein-coding Rspo3 R-spondin 3 ENCODES a protein that exhibits frizzled binding (ortholog); heparin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel remodeling (ortholog); branching involved in labyrinthine layer morphogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); esophageal cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955436 8151122 8235183 + 102007271 AGCD01033727;AGCD01033728;AGCD01033729;AGCD01033730;AGCD01033731;GBCE01131532;GBDJ01092589;XM_005389165 XP_005389222 MODEL 8933303 protein-coding Treh trehalase ENCODES a protein that exhibits alpha,alpha-trehalase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); trehalose catabolic process (ortholog); PARTICIPATES IN trehalose degradation pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); stomach cancer (ortholog) NW_004955412 19801153 19815394 - 102016901 AGCD01012978;GBCE01024811;XM_005378269;XM_005378270;XM_005378271;XM_005378273 XP_005378326;XP_005378327;XP_005378328;XP_005378330 MODEL 8994308 ncrna LOC102018395 uncharacterized LOC102018395 NW_004955417 9450900 9469286 + 102018395 AGCD01018052;GBDF01211316;XR_001233466;XR_260468 MODEL 8970740 protein-coding LOC102008248 retinal dehydrogenase 1 NW_004955512 5877696 5918693 + 102008248 AGCD01066780;GBCQ01010586;GBDI01006910;XM_013506548 XP_013362002 MODEL 8781509 protein-coding Slc38a7 solute carrier family 38 member 7 ENCODES a protein that exhibits L-asparagine:sodium symporter activity (ortholog); L-glutamine:sodium symporter activity (ortholog); INVOLVED IN asparagine transport (ortholog); L-glutamine transport (ortholog); sodium ion transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN axon (ortholog); lysosomal membrane (ortholog); neuronal cell body (ortholog) NW_004955433 16086747 16100185 - 102016190 AGCD01031785;GBDJ01127120;XM_013516230;XM_013516231 XP_013371684;XP_013371685 MODEL 8794771 protein-coding Polr2k RNA polymerase II, I and III subunit K INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase II (ortholog); transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); lung cancer (ortholog); FOUND IN fibrillar center (ortholog); nucleus (ortholog); RNA polymerase I complex (ortholog) NW_004955417 15412527 15416090 + 102015404 AGCD01018232;GBDF01122589;XM_005381864 XP_005381921 MODEL 8849679 ncrna LOC102006000 uncharacterized LOC102006000 NW_004955408 27481149 27486049 + 102006000 AGCD01008679;GBDF01076903;XR_259721 MODEL 8964625 protein-coding LOC102005646 zinc finger protein 136-like NW_004955569 1261038 1282057 - 102005646 AGCD01074645;GBDI01011361;XM_005413498;XM_013509376 XP_005413555;XP_013364830 MODEL 8757371 protein-coding Spink5 serine peptidase inhibitor Kazal type 5 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN epidermal cell differentiation (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); angioedema (ortholog); aspirin-induced respiratory disease (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955415 6118616 6186632 - 102009598 AGCD01016012;GBCC01001605;XM_013512362;XM_013512363;XM_013512364 XP_013367816;XP_013367817;XP_013367818 MODEL 39132709 snorna SNORD83 Small nucleolar RNA SNORD83 730469219 snorna SNORA40 Small nucleolar RNA SNORA40 8908392 pseudo LOC102011382 ubiquitin carboxyl-terminal hydrolase 1 pseudogene NW_004955402 52962185 52963700 + 102011382 AGCD01001352 MODEL 9022016 ncrna LOC102011824 uncharacterized LOC102011824 NW_004955402 7083653 7093047 - 102011824 AGCD01000165;GBDF01118415;XR_259035 MODEL 39133483 snrna U2 U2 spliceosomal RNA 8877689 pseudo LOC102003185 protein phosphatase inhibitor 2 pseudogene NW_004955562 2132567 2195973 - 102003185 AGCD01074022;AGCD01074023;AGCD01074024;AGCD01074025;AGCD01074026;AGCD01074027;AGCD01074028;XM_005413094 MODEL 8787536 protein-coding Lpin3 lipin 3 ENCODES a protein that exhibits phosphatidate phosphatase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955445 15600510 15616452 - 102029806 AGCD01039848;GBDI01324590;XM_013518277;XM_013518278;XM_013518279;XM_013518280;XM_013518281;XM_013518282 XP_013373731;XP_013373732;XP_013373733;XP_013373734;XP_013373735;XP_013373736 MODEL 39133357 snorna SNORA66 Small nucleolar RNA SNORA66 8793239 protein-coding Phlda3 pleckstrin homology like domain family A member 3 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); myocardial infarction (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 37579006 37582230 - 102016017 AGCD01006576;GBDI01066919;XM_005375183 XP_005375240 MODEL 8803414 protein-coding Sema4g semaphorin 4G NW_004955485 9201078 9211100 - 102004936 AGCD01058752;GBBH01006973;GBCQ01000916;XM_005403895 XP_005403952 MODEL 8831292 pseudo LOC102007485 BTB/POZ domain-containing protein 7 pseudogene NW_004955588 764940 776028 - 102007485 AGCD01076122 MODEL 8743582 pseudo LOC102010209 zinc finger CCCH domain-containing protein 15 pseudogene NW_004955446 1347899 1403306 + 102010209 AGCD01039963;AGCD01039964;AGCD01039965 MODEL 8905832 protein-coding Tle3 TLE family member 3, transcriptional corepressor ENCODES a protein that exhibits transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955450 6604915 6645305 + 102011928 AGCD01042523;GBDJ01015569;XM_005393646;XM_005393647;XM_005393648;XM_005393649;XM_005393650;XM_005393651;XM_005393652;XM_005393654;XM_005393655;XM_005393656;XM_005393657;XM_013518996;XM_013518998 XP_005393703;XP_005393704;XP_005393705;XP_005393706;XP_005393707;XP_005393708;XP_005393709;XP_005393711;XP_005393712;XP_005393713;XP_005393714;XP_013374450;XP_013374452 MODEL 8909981 protein-coding LOC102022478 ATP synthase F(0) complex subunit C1, mitochondrial-like NW_004955464 4261213 4261795 - 102022478 AGCD01049986;XM_013521673 XP_013377127 MODEL 8756240 protein-coding Sorcs3 sortilin related VPS10 domain containing receptor 3 INVOLVED IN learning (ortholog); memory (ortholog); positive regulation of synaptic transmission (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic density (ortholog) NW_004955485 5474081 6048912 - 102013176 AGCD01058597;AGCD01058598;AGCD01058599;AGCD01058600;AGCD01058601;AGCD01058602;AGCD01058603;AGCD01058604;AGCD01058605;GBDF01016069;XM_005403919 XP_005403976 MODEL 730469192 snorna SNORA19 Small nucleolar RNA SNORA19 8703550 ncrna LOC102005651 uncharacterized LOC102005651 NW_004955449 5758290 5762221 + 102005651 AGCD01041942;XR_262490 MODEL 8832187 pseudo LOC102008250 cytochrome c oxidase assembly protein COX16 homolog, mitochondrial pseudogene NW_004955434 4045849 4046615 - 102008250 AGCD01032154;XM_005388576;XM_005388577 MODEL 8750635 protein-coding Rhobtb2 Rho related BTB domain containing 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog) NW_004955403 46367390 46390551 + 102016123 AGCD01002856;GBBH01177038;XM_005373692;XM_005373693;XM_013513944 XP_005373749;XP_005373750;XP_013369398 MODEL 9019876 protein-coding LOC102010978 vegetative cell wall protein gp1-like NW_004955410 12702718 12714924 - 102010978 AGCD01010864;GBDJ01264475;XM_005377303;XM_013510591 XP_005377360;XP_013366045 MODEL 8888702 pseudo LOC102004215 RAC-gamma serine/threonine-protein kinase pseudogene NW_004955582 211110 212482 - 102004215 AGCD01075749 MODEL 8885877 pseudo LOC102019582 angio-associated migratory cell protein-like NW_004955466 6148040 6157739 + 102019582 AGCD01050911 MODEL 8995647 protein-coding Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); bone mineralization (ortholog); cell population proliferation (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acquired immunodeficiency syndrome (ortholog); acute leukemia (ortholog); FOUND IN CAK-ERCC2 complex (ortholog); cytoplasm (ortholog); MMXD complex (ortholog) NW_004955555 2355005 2369599 - 102009659 AGCD01073148;GBDF01126874;XM_005412511;XM_005412512;XM_013508701 XP_005412568;XP_005412569;XP_013364155 MODEL 9035162 protein-coding Wdr74 WD repeat domain 74 INVOLVED IN blastocyst formation (ortholog); ribosomal large subunit biogenesis (ortholog); RNA metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN nuclear exosome (RNase complex) (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955599 408076 413770 + 102005655 AGCD01076646;GBCE01053828;XM_005414759;XM_005414760 XP_005414816;XP_005414817 MODEL 8835897 protein-coding Srsf3 serine and arginine rich splicing factor 3 ENCODES a protein that exhibits phospholipase binding (ortholog); pre-mRNA binding (ortholog); primary miRNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); mRNA export from nucleus (ortholog); primary miRNA processing (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955437 6306151 6314332 - 102028575 AGCD01034427;AGCD01034428;GBDI01019802;XM_005389649 XP_005389706 MODEL 8827192 protein-coding Trem2 triggering receptor expressed on myeloid cells 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); apolipoprotein A-I binding (ortholog); apolipoprotein binding (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); apoptotic cell clearance (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Alzheimer's disease 17 (ortholog); cervical cancer (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); plasma membrane raft (ortholog) NW_004955437 7780886 7785597 - 102009649 AGCD01034467;GBCE01052348;XM_005389679 XP_005389736 MODEL 8892110 protein-coding C2cd3 C2 domain containing 3 centriole elongation regulator INVOLVED IN brain development (ortholog); centriole elongation (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955414 17444299 17557912 + 102008934 AGCD01015241;AGCD01015242;AGCD01015243;GBDF01118457;XM_013511935;XM_013511936;XM_013511937 XP_013367389;XP_013367390;XP_013367391 MODEL 9002863 protein-coding Ptprj protein tyrosine phosphatase receptor type J ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); delta-catenin binding (ortholog); INVOLVED IN B cell differentiation (ortholog); blood coagulation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; platelet-derived growth factor signaling pathway; somatostatin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon carcinoma (ortholog); FOUND IN cell junction (ortholog); cell surface (ortholog); cell-cell junction (ortholog) NW_004955422 396266 438792 - 102005815 AGCD01022405;AGCD01022406;GBDJ01233455;GBDJ01239540;XM_013514213 XP_013369667 MODEL 8884105 protein-coding Rasal3 RAS protein activator like 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of Ras protein signal transduction (ortholog); positive regulation of NK T cell proliferation (ortholog); ASSOCIATED WITH acute megakaryocytic leukemia (ortholog); acute myeloid leukemia (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of membrane (ortholog); plasma membrane (ortholog) NW_004955495 7795619 7808674 + 102019290 AGCD01062164;AGCD01062165;AGCD01062166;GBCE01135351;GBDK01007096;XM_013505123;XM_013505124 XP_013360577;XP_013360578 MODEL 8858681 pseudo LOC102012193 proteasome subunit alpha type-6 pseudogene NW_004955416 8425977 8426698 - 102012193 AGCD01017052 MODEL 8936900 pseudo LOC102006348 transcription factor 4 pseudogene NW_004955418 11676381 11678020 + 102006348 AGCD01019007 MODEL 9033306 protein-coding Sema5a semaphorin 5A ENCODES a protein that exhibits axon guidance receptor activity (ortholog); chondroitin sulfate proteoglycan binding (ortholog); heparan sulfate proteoglycan binding (ortholog); INVOLVED IN axon extension (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN membrane (ortholog) NW_004955504 6343747 6691945 - 102019086 AGCD01064921;AGCD01064922;AGCD01064923;AGCD01064924;AGCD01064925;AGCD01064926;AGCD01064927;AGCD01064928;AGCD01064929;GBCQ01101626;XM_005407077;XM_013505908 XP_005407134;XP_013361362 MODEL 8915234 trna Trnas-gcu transfer RNA serine (anticodon GCU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978842 AGCD01012398;AGCD01016984;AGCD01022970;AGCD01050591;AGCD01050613;AGCD01050626;AGCD01051471;AGCD01057630;AGCD01063790 MODEL 150537121 snorna SNORD86 Small nucleolar RNA SNORD86 8856089 pseudo LOC102009017 60S ribosomal protein L14 pseudogene NW_004955408 1564719 1565405 - 102009017 AGCD01007965 MODEL 8782912 protein-coding Tle4 TLE family member 4, transcriptional corepressor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955530 3795336 3932596 - 102014942 AGCD01069963;AGCD01069964;GBCC01033359;GBDF01281043;XM_013507550 XP_013363004 MODEL 8781796 protein-coding Rpl26l1 ribosomal protein L26 like 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); COVID-19 (ortholog) NW_004955408 25650385 25659365 + 102027818 AGCD01008648;AGCD01008649;GBDI01074917;XM_005376344 XP_005376401 MODEL 8941054 protein-coding Sgpp1 sphingosine-1-phosphate phosphatase 1 ENCODES a protein that exhibits dihydrosphingosine-1-phosphate phosphatase activity (ortholog); sphingosine-1-phosphate phosphatase activity (ortholog); INVOLVED IN ER to Golgi ceramide transport (ortholog); extrinsic apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955466 6075507 6103739 + 102019255 AGCD01050906;AGCD01050907;GBDF01223287;XM_013522009 XP_013377463 MODEL 39131974 snorna SNORD116 Small nucleolar RNA SNORD116 39133360 snrna U4 U4 spliceosomal RNA 8977918 pseudo LOC102019926 heterogeneous nuclear ribonucleoprotein A1-like NW_004955423 1559337 1559990 - 102019926 AGCD01023443 MODEL 8872034 ncrna LOC102004943 uncharacterized LOC102004943 NW_004955423 3395039 3416041 + 102004943 AGCD01023511;AGCD01023512;GBDF01085995;XR_001234034;XR_001234035;XR_001234036 MODEL 8743377 ncrna LOC102003187 uncharacterized LOC102003187 NW_004955574 857172 858868 - 102003187 AGCD01075135;GBBH01101002;XR_265062 MODEL 8751119 ncrna LOC102016433 uncharacterized LOC102016433 NW_004955447 7660586 7680211 - 102016433 AGCD01040821;GBDF01160216;XR_001235705;XR_001235706;XR_262413 MODEL 8875513 protein-coding Rnf144a ring finger protein 144A ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN pattern recognition receptor signaling pathway (ortholog); protein K6-linked ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); endoplasmic reticulum membrane (ortholog); endosome membrane (ortholog) NW_004955487 1884179 1985559 - 102010592 AGCD01059253;AGCD01059254;AGCD01059255;AGCD01059256;GBDJ01229979;XM_005404351;XM_005404353;XM_005404357;XM_005404360;XM_005404361;XM_013504375;XM_013504376 XP_005404408;XP_005404410;XP_005404414;XP_005404417;XP_005404418;XP_013359829;XP_013359830 MODEL 9059253 protein-coding Rspo4 R-spondin 4 INVOLVED IN nail development (ortholog); positive regulation of Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Abdominal Pain (ortholog); acute myeloid leukemia (ortholog); autistic disorder (ortholog) NW_004955596 265282 295283 - 102009786 AGCD01076512;AGCD01076513;AGCD01076514;GBCE01111001;XM_005414687 XP_005414744 MODEL 8736581 protein-coding Psmb11 proteasome subunit beta 11 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN CD8-positive, alpha-beta T cell differentiation (ortholog); proteolysis (ortholog); T cell differentiation in thymus (ortholog); FOUND IN proteasome core complex (ortholog) NW_004955409 37260080 37260866 - 102020775 AGCD01010501;GBDI01282560;GBDI01342134;XM_013510447 XP_013365901 MODEL 8832570 protein-coding Plpp3 phospholipid phosphatase 3 ENCODES a protein that exhibits ceramide-1-phosphate phosphatase activity (ortholog); delta-catenin binding (ortholog); integrin binding (ortholog); INVOLVED IN Bergmann glial cell differentiation (ortholog); blood vessel development (ortholog); cell adhesion (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); clear cell renal cell carcinoma (ortholog); coronary artery disease (ortholog); FOUND IN adherens junction (ortholog); basolateral plasma membrane (ortholog); endoplasmic reticulum exit site (ortholog) NW_004955464 3122420 3197359 + 102021743 AGCD01049971;AGCD01049972;GBDJ01134336;XM_013521597;XM_013521598 XP_013377051;XP_013377052 MODEL 10191528 ncrna LOC106147489 uncharacterized LOC106147489 NW_004955567 797119 801109 + 106147489 AGCD01074433;GBCQ01145493;XR_001232419 MODEL 8994392 protein-coding Slc38a8 solute carrier family 38 member 8 INVOLVED IN aspartate metabolic process (ortholog); neuron projection development (ortholog); optic nerve development (ortholog); ASSOCIATED WITH Albinism (ortholog); cellulitis (ortholog); cervical cancer (ortholog); FOUND IN membrane (ortholog) NW_004955564 233796 252565 + 102021608 AGCD01074192;AGCD01074193;GBDF01041455;XM_005413230 XP_005413287 MODEL 9054941 pseudo LOC102007487 uncharacterized LOC102007487 NW_004955402 44529952 44533463 + 102007487 AGCD01001118 MODEL 8703320 protein-coding Srsf4 serine and arginine rich splicing factor 4 ENCODES a protein that exhibits sequence-specific mRNA binding (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); response to insulin (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear speck (ortholog) NW_004955452 8143850 8174830 - 102023221 AGCD01044211;GBDJ01016011;XM_005394977;XM_013519479;XM_013519480 XP_005395034;XP_013374933;XP_013374934 MODEL 730469221 snorna SNORA40 Small nucleolar RNA SNORA40 8734292 ncrna LOC102011385 uncharacterized LOC102011385 NW_004955403 10477798 10481600 + 102011385 AGCD01001922;GBDF01013779;XR_259170 MODEL 39133484 snrna U2 U2 spliceosomal RNA 9036369 protein-coding Sord sorbitol dehydrogenase ENCODES a protein that exhibits (R,R)-butanediol dehydrogenase activity (ortholog); D-xylulose reductase activity (ortholog); identical protein binding (ortholog); INVOLVED IN D-glucuronate catabolic process (ortholog); D-sorbitol catabolic process (ortholog); D-sorbitol metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH autosomal recessive distal hereditary motor neuronopathy 8 (ortholog); Breast Cancer, Familial (ortholog); cataract (ortholog); FOUND IN cytosol (ortholog); extracellular exosome (ortholog); membrane (ortholog) NW_004955409 8305819 8333733 - 102024653 AGCD01009393;AGCD01009394;GBCQ01010097;XM_005376745;XM_013510316 XP_005376802;XP_013365770 MODEL 8754591 protein-coding Rdh8 retinol dehydrogenase 8 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN retinol metabolic process (ortholog); visual perception (ortholog); PARTICIPATES IN retinoid cycle metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955495 1388385 1393209 + 102027317 AGCD01061685;GBDJ01396679;XM_005405579 XP_005405636 MODEL 8927906 protein-coding LOC102005653 cytochrome c oxidase subunit 5A, mitochondrial ENCODES a protein that exhibits cytochrome-c oxidase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); mitochondrial complex IV deficiency nuclear type 20 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955450 3036387 3049121 + 102005653 AGCD01042420;GBCQ01008019;XM_005393528;XM_005393529 XP_005393585;XP_005393586 MODEL 9065681 protein-coding LOC102013387 olfactory receptor 10A2-like NW_004955458 2450590 2451552 - 102013387 AGCD01047233;XM_005397241 XP_005397298 MODEL 730469005 snorna SNORA67 Small nucleolar RNA SNORA67 9065194 ncrna LOC102018396 uncharacterized LOC102018396 NW_004955417 27113467 27122607 + 102018396 AGCD01018533;GBCE01184006;XR_260504 MODEL 8901837 protein-coding Tle5 TLE family member 5, transcriptional modulator ENCODES a protein that exhibits identical protein binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955495 5328299 5336195 + 102011556 AGCD01062000;GBCE01002154;GBDI01010761;XM_013505260 XP_013360714 MODEL 8759570 ncrna LOC102004217 uncharacterized LOC102004217 NW_004955449 14240223 14246011 - 102004217 AGCD01042162;AGCD01042163;XR_262502 MODEL 8827214 protein-coding LOC102011826 60S ribosomal protein L17 NW_004955402 34568222 34571290 - 102011826 AGCD01000865;GBDF01002140;XM_013510590 XP_013366044 MODEL 9040384 protein-coding Phldb1 pleckstrin homology like domain family B member 1 INVOLVED IN basement membrane organization (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN basal cortex (ortholog) NW_004955412 19754997 19800984 + 102013398 AGCD01012977;AGCD01012978;GBCQ01037579;XM_005378253;XM_005378254;XM_005378255;XM_005378256;XM_005378257;XM_005378258;XM_005378259;XM_005378260;XM_005378261;XM_005378262;XM_005378263;XM_005378265;XM_005378268 XP_005378310;XP_005378311;XP_005378312;XP_005378313;XP_005378314;XP_005378315;XP_005378316;XP_005378317;XP_005378318;XP_005378319;XP_005378320;XP_005378322;XP_005378325 MODEL 8990685 ncrna LOC102006003 uncharacterized LOC102006003 NW_004955409 4395307 4403847 + 102006003 AGCD01009288;XR_259753 MODEL 39131440 protein-coding SPINK5 serine peptidase inhibitor, Kazal type 5 8858107 protein-coding Pkib cAMP-dependent protein kinase inhibitor beta ENCODES a protein that exhibits cAMP-dependent protein kinase inhibitor activity (ortholog); INVOLVED IN positive regulation of telomere maintenance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955436 4433065 4600967 + 102022958 AGCD01033664;AGCD01033665;AGCD01033666;AGCD01033667;AGCD01033668;AGCD01033669;GBBH01005987;XM_005389139;XM_005389141;XM_005389142;XM_005389143;XM_005389144;XM_005389147;XM_013516610;XM_013516611;XM_013516612;XM_013516613 XP_005389196;XP_005389198;XP_005389199;XP_005389200;XP_005389201;XP_005389204;XP_013372064;XP_013372065;XP_013372066;XP_013372067 MODEL 8970328 protein-coding Rnf144b ring finger protein 144B ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Endometrial Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955483 7784522 7862917 - 102017773 AGCD01057813;GBCB01075903;GBDJ01133578;XM_005403388;XM_013503838 XP_005403445;XP_013359292 MODEL 8966638 protein-coding Ptprk protein tyrosine phosphatase receptor type K ENCODES a protein that exhibits beta-catenin binding (ortholog); gamma-catenin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell migration (ortholog); cellular response to reactive oxygen species (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); cell junction (ortholog); cell surface (ortholog) NW_004955436 8975742 9371608 - 102012681 AGCD01033755;AGCD01033756;AGCD01033757;AGCD01033758;AGCD01033759;GBBH01167041;XM_013516643 XP_013372097 MODEL 8911149 protein-coding LOC102006353 sodium- and chloride-dependent transporter XTRP3A NW_004955420 26159281 26191883 + 102006353 AGCD01021392;GBCE01175467;XM_005383468 XP_005383525 MODEL 15036854 trna Trnas-gga transfer RNA serine (anticodon GGA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978803 8929315 protein-coding Ppp1r3f protein phosphatase 1 regulatory subunit 3F ENCODES a protein that exhibits glycogen binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN regulation of glycogen biosynthetic process (ortholog); ASSOCIATED WITH Ataxia (ortholog); epilepsy (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955543 750094 767894 + 102011247 AGCD01071600;GBCB01002712;XM_005411333;XM_005411334 XP_005411390;XP_005411391 MODEL 39132887 snorna SNORD87 Small nucleolar RNA SNORD87 8902365 protein-coding Sema5b semaphorin 5B INVOLVED IN axon extension (ortholog); detection of light stimulus involved in visual perception (ortholog); neuron projection extension (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955427 22109946 22219497 - 102013432 AGCD01027464;AGCD01027465;GBCQ01113375;XM_005386522;XM_005386523;XM_013515029 XP_005386579;XP_005386580;XP_013370483 MODEL 8715172 protein-coding Rhobtb3 Rho related BTB domain containing 3 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); small GTPase binding (ortholog); INVOLVED IN male gonad development (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955418 16772363 16839347 - 102028966 AGCD01019128;AGCD01019129;GBCE01159877;GBDK01193526;XM_013512974 XP_013368428 MODEL 8815434 protein-coding Rpl27 ribosomal protein L27 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); response to aldosterone (ortholog); rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Diamond-Blackfan anemia 16 (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955451 16788505 16790468 + 102028708 AGCD01043707;GBDJ01025873;XM_005394492;XM_005394493 XP_005394549;XP_005394550 MODEL 8873928 protein-coding LOC102019587 taste receptor type 2 member 7-like NW_004955413 6997395 7003912 + 102019587 AGCD01013788;XM_005379616 XP_005379673 MODEL 10256792 protein-coding Polr2l RNA polymerase II, I and III subunit L ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase II (ortholog); transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase I complex (ortholog) NW_004955476 11291215 11293536 + 106146378 AGCD01055447;AY533215;GBDI01017433;XM_013502959 AAS59418;Q6QN04;XP_013358413 MODEL 8926373 ncrna LOC102016436 uncharacterized LOC102016436 NW_004955402 16539771 16580734 - 102016436 AGCD01000481;AGCD01000482;AGCD01000483;GBDF01208470;XR_259055 MODEL 8956492 pseudo LOC102008621 josephin-1 pseudogene NW_004955477 274210 274810 + 102008621 AGCD01055485 MODEL 9010891 protein-coding Wdr75 WD repeat domain 75 INVOLVED IN positive regulation of rRNA processing (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955403 9352615 9383206 - 102008367 AGCD01001905;GBDJ01219698;XM_005373322 XP_005373379 MODEL 8842198 protein-coding Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN apoptotic process (ortholog); DNA repair (ortholog); DNA topological change (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Arsenic Poisoning (ortholog); asphyxia neonatorum (ortholog); FOUND IN nucleoplasm (ortholog); transcription factor TFIID complex (ortholog); transcription factor TFIIH core complex (ortholog) NW_004955459 3210936 3238401 + 102005903 AGCD01048010;AGCD01048011;GBDJ01135141;XM_005397616;XM_005397617;XM_013521085 XP_005397673;XP_005397674;XP_013376539 MODEL 730469070 snorna SNORA19 Small nucleolar RNA SNORA19 10320700 ncrna LOC106147490 uncharacterized LOC106147490 NW_004955567 419170 428642 - 106147490 AGCD01074404;GBDK01255717;XR_001232420 MODEL 8785865 protein-coding Rasd1 ras related dexamethasone induced 1 INVOLVED IN cellular response to nitric oxide (ortholog); intracellular signaling cassette (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955577 452993 454659 + 102018241 AGCD01075396;GBCB01059855;GBDJ01004132;XM_005413972 XP_005414029 MODEL 8962710 pseudo LOC102012194 single-stranded DNA-binding protein 2 pseudogene NW_004955477 6506741 6507624 - 102012194 AGCD01055610 MODEL 8869555 protein-coding LOC102011387 serine/threonine-protein phosphatase with EF-hands 2-like NW_004955797 7064 18498 + 102011387 AGCD01078368;GBCQ01026990;GBDJ01093079;XM_013510194 XP_013365648 MODEL 8970273 protein-coding Prmt6 protein arginine methyltransferase 6 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H2AR3 methyltransferase activity (ortholog); INVOLVED IN cellular senescence (ortholog); chromatin remodeling (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH cocaine dependence (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955435 10816787 10818047 + 102015441 AGCD01033100;GBCB01051915;XM_005388819 XP_005388876 MODEL 8817269 pseudo LOC102008251 60S ribosomal protein L17 pseudogene NW_004955523 12998 13552 + 102008251 AGCD01068430 MODEL 39133361 snrna U4 U4 spliceosomal RNA 9005094 protein-coding Sgpp2 sphingosine-1-phosphate phosphatase 2 ENCODES a protein that exhibits dihydrosphingosine-1-phosphate phosphatase activity (ortholog); sphingosine-1-phosphate phosphatase activity (ortholog); INVOLVED IN regulation of type B pancreatic cell proliferation (ortholog); sphingosine metabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955453 11244077 11361990 - 102024083 AGCD01044806;AGCD01044807;GBDJ01238332;XM_005395495;XM_005395497 XP_005395552;XP_005395554 MODEL 39131972 snorna SNORD116 Small nucleolar RNA SNORD116 8952951 pseudo LOC102019927 olfactory receptor 7A10-like NW_004955495 8071501 8074360 + 102019927 AGCD01062178 MODEL 8956392 ncrna LOC102004949 uncharacterized LOC102004949 NW_004955424 14423944 14430745 - 102004949 AGCD01024654;GBDF01279057;XR_261065 MODEL 8732721 protein-coding LOC102003190 class I histocompatibility antigen, B alpha chain-like NW_004955583 377680 382207 + 102003190 AGCD01075815;AGCD01075816;GBCE01000219;GBDK01001528;XM_013509791 XP_013365245 MODEL 8993443 protein-coding Treml1 triggering receptor expressed on myeloid cells like 1 INVOLVED IN calcium-mediated signaling (ortholog); platelet activation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955437 7773279 7778197 - 102009104 AGCD01034467;GBDI01367631;XM_005389677;XM_005389678 XP_005389734;XP_005389735 MODEL 8837596 pseudo LOC102018399 heterogeneous nuclear ribonucleoprotein A1-like NW_004955484 1981678 1990275 + 102018399 AGCD01058075;AGCD01058076 MODEL 9020243 protein-coding Rspry1 ring finger and SPRY domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Developmental Disabilities (ortholog); Dwarfism (ortholog) NW_004955433 14843521 14884083 + 102022845 AGCD01031730;GBDF01121224;XM_005388375;XM_005388377 XP_005388432;XP_005388434 MODEL 8713038 protein-coding C2cd4c C2 calcium dependent domain containing 4C FOUND IN cytosol (ortholog) NW_004955495 7236627 7243099 + 102025260 AGCD01062125;GBDF01192259;XM_005406041 XP_005406098 MODEL 8749301 protein-coding LOC102022480 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase NW_004955465 3703513 3740356 - 102022480 AGCD01050388;AGCD01050389;GBBH01089251;XM_005398839 XP_005398896 MODEL 8990220 protein-coding Polr2m RNA polymerase II subunit M ENCODES a protein that exhibits RNA polymerase II complex binding (ortholog); INVOLVED IN maintenance of ER location (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); FOUND IN neuronal cell body (ortholog); nuclear envelope (ortholog); nucleus (ortholog) NW_004955450 16633975 16642085 - 102018875 AGCD01042847;AGCD01042848;GBDI01062092;XM_005393846 XP_005393903 MODEL 8723520 protein-coding Plpp4 phospholipid phosphatase 4 ENCODES a protein that exhibits diacylglycerol diphosphate phosphatase activity (ortholog); identical protein binding (ortholog); phosphatidate phosphatase activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); phospholipid dephosphorylation (ortholog); regulation of calcium ion import (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog) NW_004955551 1328652 1458714 + 102015056 AGCD01072692;AGCD01072693;AGCD01072694;GBDJ01262036;XM_005412174 XP_005412231 MODEL 8762028 protein-coding LOC102007488 vomeronasal type-1 receptor 2-like NW_004955603 278326 279225 + 102007488 AGCD01076825;XM_005414837 XP_005414894 MODEL 8985544 protein-coding Slc38a9 solute carrier family 38 member 9 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); cholesterol binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN amino acid transmembrane transport (ortholog); asparagine transport (ortholog); cellular response to amino acid stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); late endosome membrane (ortholog) NW_004955446 12042848 12132211 + 102016114 AGCD01040222;AGCD01040223;AGCD01040224;AGCD01040225;GBBH01113101;XM_005392695;XM_013518400;XM_013518401;XM_013518402;XM_013518403;XM_013518404 XP_005392752;XP_013373854;XP_013373855;XP_013373856;XP_013373857;XP_013373858 MODEL 730469226 snorna SNORA40 Small nucleolar RNA SNORA40 8958761 protein-coding Rnf145 ring finger protein 145 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955408 13169276 13207424 - 102020210 AGCD01008349;AGCD01008350;GBBH01116610;GBDJ01190776;XM_013508847 XP_013364301 MODEL 39133380 snrna U2 U2 spliceosomal RNA 9049507 trna Trnas-uga transfer RNA serine (anticodon UGA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955483;NW_004955425;NW_004955465 756793;20176554;13268508 756874;20176635;13268589 +;+;+ 101978804 AGCD01025718;AGCD01050595;AGCD01057629 MODEL 126903056 snorna SNORD88 Small nucleolar RNA SNORD88 8983276 protein-coding Rdm1 RAD52 motif containing 1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog) NW_004955451 15002098 15011338 + 102022039 AGCD01043590;AGCD01043591;GBBH01050938;GBDF01220846;XM_013519359 XP_013374813 MODEL 730468975 snorna SNORA67 Small nucleolar RNA SNORA67 8879498 protein-coding LOC102010210 transmembrane protease serine 11A NW_004955447 4915932 4966492 + 102010210 AGCD01040736;GBDI01055640;XM_005392828 XP_005392885 MODEL 39131444 protein-coding PSMB11 proteasome subunit beta 11 39131970 snorna SNORD116 Small nucleolar RNA SNORD116 8904475 pseudo LOC102004220 protein quaking-like NW_004955591 59735 61241 + 102004220 AGCD01076238;AGCD01076239 MODEL 8999499 ncrna LOC102011827 uncharacterized LOC102011827 NW_004955592 446843 448929 - 102011827 AGCD01076315;GBCC01022945;XR_265138 MODEL 8933510 ncrna LOC102008623 uncharacterized LOC102008623 NW_004955479 10170741 10180244 - 102008623 AGCD01056526;AGCD01056527;GBDI01103470;XR_263739 MODEL 8735666 ncrna LOC102006004 uncharacterized LOC102006004 NW_004955461 3891790 3962423 - 102006004 AGCD01048855;AGCD01048856;AGCD01048857;GBDK01220667;XR_263078 MODEL 39131975 snorna SNORA2 Small nucleolar RNA SNORA2/SNORA34 family 8806269 protein-coding Srsf5 serine and arginine rich splicing factor 5 ENCODES a protein that exhibits protein kinase B binding (ortholog); RNA binding (ortholog); RS domain binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); liver development (ortholog); liver regeneration (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); cervical cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955466 612221 617087 - 102026619 AGCD01050667;GBDJ01008234;XM_005399030;XM_005399031 XP_005399087;XP_005399088 MODEL 8968855 ncrna LOC102012196 uncharacterized LOC102012196 NW_004955417 7422583 7435827 - 102012196 AGCD01018004;GBDF01079001;XR_260462 MODEL 9027019 protein-coding Lpl lipoprotein lipase ENCODES a protein that exhibits apolipoprotein binding (ortholog); calcium ion binding (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cellular response to nutrient (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); Abdominal Pain (ortholog); alcohol-associated liver disease (ortholog); FOUND IN catalytic complex (ortholog); cell surface (ortholog); extracellular region (ortholog) NW_004955403 43646084 43672116 + 102023218 AGCD01002783;GBDI01018698;XM_005373625 XP_005373682 MODEL 10164899 ncrna LOC106147491 uncharacterized LOC106147491 NW_004955567 764426 768708 - 106147491 AGCD01074432;GBDF01306347;XR_001232421 MODEL 9023530 protein-coding LOC102010984 sentrin-specific protease 3 NW_004955467 9351956 9374126 - 102010984 AGCD01051498;GBDJ01134691;XM_005399477;XM_005399478;XM_005399483;XM_013522078;XM_013522079;XM_013522080;XM_013522081;XM_013522082 XP_005399534;XP_005399535;XP_005399540;XP_013377532;XP_013377533;XP_013377534;XP_013377535;XP_013377536 MODEL 9025092 protein-coding Ptprm protein tyrosine phosphatase receptor type M ENCODES a protein that exhibits cadherin binding (ortholog); identical protein binding (ortholog); phosphatase activity (ortholog); INVOLVED IN homophilic cell-cell adhesion (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of endothelial cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN adherens junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955402 3243447 3756457 - 102030364 AGCD01000098;AGCD01000099;AGCD01000100;AGCD01000101;AGCD01000102;AGCD01000103;GBBH01229558;GBCE01153361;XM_005372618 XP_005372675 MODEL 8843225 protein-coding Sorl1 sortilin related receptor 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); aspartic-type endopeptidase inhibitor activity (ortholog); cargo receptor activity (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); cell migration (ortholog); diet induced thermogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Alzheimer's disease 9 (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); early endosome membrane (ortholog) NW_004955412 22421984 22576179 + 102015704 AGCD01013047;AGCD01013048;AGCD01013049;AGCD01013050;AGCD01013051;AGCD01013052;GBBH01091931;XM_005378364 XP_005378421 MODEL 8793096 protein-coding LOC102009018 up-regulator of cell proliferation NW_004955456 7974915 7999963 + 102009018 AGCD01046440;AGCD01046441;AGCD01046442;AGCD01046443;GBBH01208050;GBCE01137430;XM_013520521 XP_013375975 MODEL 8922679 protein-coding Ppp1r3g protein phosphatase 1 regulatory subunit 3G ENCODES a protein that exhibits glycogen binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); positive regulation of glycogen biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog); protein phosphatase type 1 complex (ortholog) NW_004955465 8485273 8488181 - 102023127 AGCD01050474;AGCD01050475;GBBH01188992;GBDK01306249;XM_013521768 XP_013377222 MODEL 9048480 protein-coding LOC102005656 retinol dehydrogenase 7-like NW_004955641 46039 49565 - 102005656 AGCD01077703;AGCD01077704;XM_005415046 XP_005415103 MODEL 8999557 pseudo LOC102013388 calcium-transporting ATPase type 2C member 1 pseudogene NW_004955408 2427135 2428006 + 102013388 AGCD01008006 MODEL 39133384 snrna U2 U2 spliceosomal RNA 8974328 protein-coding Rpl27a ribosomal protein L27a ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); cerebellar ataxia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955414 24461997 24464828 + 102020239 AGCD01015547;GBDK01021711;XM_005380229;XM_013511887 XP_005380286;XP_013367341 MODEL 8986726 ncrna LOC102004950 uncharacterized LOC102004950 NW_004955425 26645515 26663869 - 102004950 AGCD01025951;GBDF01303336;XR_261175;XR_261176 MODEL 8889659 protein-coding Spink6 serine peptidase inhibitor Kazal type 6 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); sarcoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955415 6041712 6053963 - 102007221 AGCD01016009;GBDJ01248322;XM_005380642 XP_005380699 MODEL 10101754 protein-coding C2cd4d C2 calcium dependent domain containing 4D NW_004955589 582261 583519 + 106147595 AGCD01076176;GBDI01079516;XM_013509939 XP_013365393 MODEL 9063202 protein-coding Pkig cAMP-dependent protein kinase inhibitor gamma ENCODES a protein that exhibits cAMP-dependent protein kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of protein import into nucleus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog) NW_004955445 12717962 12818734 - 102017284 AGCD01039761;AGCD01039762;GBDJ01085855;XM_005392468;XM_005392470 XP_005392525;XP_005392527 MODEL 8708424 protein-coding Wdr76 WD repeat domain 76 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN DNA damage response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN heterochromatin (ortholog); nucleus (ortholog); site of DNA damage (ortholog) NW_004955416 10280112 10337963 + 102015196 AGCD01017129;AGCD01017130;AGCD01017131;AGCD01017132;AGCD01017133;AGCD01017134;AGCD01017135;GBDF01163138;XM_005381415;XM_013512615;XM_013512616;XM_013512617 XP_005381472;XP_013368069;XP_013368070;XP_013368071 MODEL 8876439 protein-coding LOC102008252 cartilage oligomeric matrix protein NW_004955524 2879519 2884305 + 102008252 AGCD01068843;GBDI01053407;GBDK01101224;XM_013507182 XP_013362636 MODEL 8856723 protein-coding LOC102006354 small ubiquitin-related modifier 2-like NW_004955491 597140 597413 + 102006354 AGCD01060341;XM_005404728;XM_005404729 XP_005404785;XP_005404786 MODEL 9025242 protein-coding LOC102011388 cytochrome P450 2D16-like NW_004956190 7085 8242 + 102011388 AGCD01079215;GBCQ01011641;GBDK01146022;XM_005415175 XP_005415232 MODEL 9013998 protein-coding Rasd2 RASD family member 2 ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); GTP binding (ortholog); phosphatidylinositol 3-kinase binding (ortholog); INVOLVED IN locomotory behavior (ortholog); negative regulation of protein ubiquitination (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955405 43191530 43196057 + 102009248 AGCD01005602;GBCE01039258;GBDF01077051;XM_005374667 XP_005374724 MODEL 8990237 pseudo LOC102019588 40S ribosomal protein S16 pseudogene NW_004955469 3930223 3930657 - 102019588 AGCD01052310 MODEL 8826709 protein-coding Ercc4 ERCC excision repair 4, endonuclease catalytic subunit ENCODES a protein that exhibits 3' overhang single-stranded DNA endonuclease activity (ortholog); damaged DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); ERCC4-ERCC1 complex (ortholog) NW_004955442 4833453 4861201 - 102018773 AGCD01037543;AGCD01037544;AGCD01037545;GBDI01017324;XM_005391144;XM_013517964 XP_005391201;XP_013373418 MODEL 8926674 protein-coding Prmt7 protein arginine methyltransferase 7 ENCODES a protein that exhibits histone binding (ortholog); histone H4 methyltransferase activity (ortholog); histone H4R3 methyltransferase activity (ortholog); INVOLVED IN genomic imprinting (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); brachydactyly (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955484 8299427 8352465 - 102009842 AGCD01058374;AGCD01058375;AGCD01058376;XM_005403584;XM_013503916;XM_013503917 XP_005403641;XP_013359370;XP_013359371 MODEL 15036842 trna Trnastop-cua transfer RNA amber suppressor (anticodon CUA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978848 8949887 protein-coding Rhoc ras homolog family member C INVOLVED IN apical junction assembly (ortholog); mitotic cytokinesis (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cleavage furrow (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955435 16115095 16117736 - 102005962 AGCD01033294;GBBH01000714;GBCQ01011782;XM_005388967 XP_005389024 MODEL 9005751 pseudo LOC102019931 cytospin-B pseudogene NW_004955424 4173433 4175625 + 102019931 AGCD01024341 MODEL 8838810 ncrna LOC102003191 uncharacterized LOC102003191 NW_004955402 40910787 40919051 - 102003191 AGCD01001005;GBDF01110513;XR_259082 MODEL 9022324 protein-coding Phldb2 pleckstrin homology like domain family B member 2 INVOLVED IN basement membrane organization (ortholog); cell migration (ortholog); establishment of cell polarity (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN basal cortex (ortholog); cell cortex (ortholog); cell leading edge (ortholog) NW_004955427 12284100 12385755 + 102022107 AGCD01027207;AGCD01027208;AGCD01027209;AGCD01027210;AGCD01027211;AGCD01027212;GBCQ01064005;XM_005386372;XM_013515158;XM_013515159;XM_013515160;XM_013515161;XM_013515162 XP_005386429;XP_013370612;XP_013370613;XP_013370614;XP_013370615;XP_013370616 MODEL 8820526 protein-coding Treml2 triggering receptor expressed on myeloid cells like 2 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN T cell activation (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); thymoma (ortholog); FOUND IN cell surface (ortholog) NW_004955437 7812005 7824344 - 102017382 AGCD01034469;GBDI01279546;XM_013517049;XM_013517050;XM_013517051 XP_013372503;XP_013372504;XP_013372505 MODEL 626189171 snorna SNORA67 Small nucleolar RNA SNORA67 9008890 protein-coding LOC102016440 uncharacterized protein C1orf198-like NW_004956284 273 5382 - 102016440 AGCD01079373;GBCQ01042040;GBDI01083284;XM_005415190 XP_005415247 MODEL 8708731 ncrna LOC102022481 uncharacterized LOC102022481 NW_004955465 10453747 10455158 + 102022481 AGCD01050510;GBCQ01164306;XR_263266 MODEL 8927755 protein-coding Rsrc1 arginine and serine rich coiled-coil 1 INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); mRNA splicing, via spliceosome (ortholog); nucleocytoplasmic transport (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 70 (ortholog); genetic disease (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955448 8947553 9249465 + 102025411 AGCD01041456;AGCD01041457;AGCD01041458;AGCD01041459;AGCD01041460;AGCD01041461;AGCD01041462;AGCD01041463;AGCD01041464;AGCD01041465;AGCD01041466;AGCD01041467;XM_013518587 XP_013374041 MODEL 8961284 protein-coding Tle6 TLE family member 6, subcortical maternal complex member ENCODES a protein that exhibits structural constituent of cytoplasmic lattice (ortholog); INVOLVED IN actin filament organization (ortholog); embryonic process involved in female pregnancy (ortholog); endoplasmic reticulum localization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytoplasmic lattice (ortholog) NW_004955495 5367237 5369601 - 102011885 AGCD01062002;GBDF01076043;XM_013505057 XP_013360511 MODEL 8881119 ncrna LOC102006005 uncharacterized LOC102006005 NW_004955462 6714177 6722753 - 102006005 AGCD01049288;GBDI01311251;XR_263100;XR_263101 MODEL 8896804 protein-coding Srsf6 serine and arginine rich splicing factor 6 ENCODES a protein that exhibits pre-mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); mRNA splice site recognition (ortholog); negative regulation of gene expression (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955445 13663474 13669102 - 102026583 AGCD01039800;GBCE01012102;XM_005392500 XP_005392557 MODEL 9021688 protein-coding Sema6a semaphorin 6A ENCODES a protein that exhibits identical protein binding (ortholog); semaphorin receptor binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN axon guidance (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to vascular endothelial growth factor stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955408 36219814 36344131 - 102028382 AGCD01008979;AGCD01008980;GBDF01280169;XM_005376537;XM_005376538;XM_005376540;XM_005376541;XM_013506973;XM_013506976 XP_005376594;XP_005376595;XP_005376597;XP_005376598;XP_013362427;XP_013362430 MODEL 8779097 protein-coding Rnf146 ring finger protein 146 ENCODES a protein that exhibits enzyme binding (ortholog); poly-ADP-D-ribose binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Brain Hypoxia-Ischemia (ortholog); osteochondrodysplasia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955436 8312096 8331648 + 102007587 AGCD01033737;GBDF01002316;GBDJ01177708;XM_005389166 XP_005389223 MODEL 8729168 protein-coding Sgsh N-sulfoglucosamine sulfohydrolase ENCODES a protein that exhibits N-sulfoglucosamine sulfohydrolase activity (ortholog); INVOLVED IN glycosaminoglycan catabolic process (ortholog); heparan sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); carbohydrate metabolic disorder (ortholog); FOUND IN lysosome (ortholog) NW_004955506 2701901 2713431 + 102019718 AGCD01065301;GBDJ01225391;XM_005407325;XM_005407326;XM_013505991;XM_013505992;XM_013505993;XR_264337;XR_264338 XP_005407382;XP_005407383;XP_013361445;XP_013361446;XP_013361447 MODEL 8885187 protein-coding Lpo lactoperoxidase ENCODES a protein that exhibits peroxidase activity (ortholog); thiocyanate peroxidase activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955451 4754572 4769380 - 102028602 AGCD01043140;AGCD01043141;GBBH01077688;GBDI01358196;XM_005394031 XP_005394088 MODEL 8974197 protein-coding LOC102018404 death domain-containing membrane protein NRADD-like NW_004955420 25181345 25184190 - 102018404 AGCD01021346;GBBH01164455;XM_013513387;XM_013513388 XP_013368841;XP_013368842 MODEL 10260254 ncrna LOC106147492 uncharacterized LOC106147492 NW_004955567 883151 885150 - 106147492 AGCD01074443;GBDF01251944;XR_001232422 MODEL 8860777 protein-coding Ppp1r42 protein phosphatase 1 regulatory subunit 42 ENCODES a protein that exhibits actin binding (ortholog); dynein complex binding (ortholog); tubulin binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN centrosome (ortholog); manchette (ortholog); microtubule cytoskeleton (ortholog) NW_004955444 12255381 12294605 + 102012136 AGCD01039067;GBDF01008759;XM_005392137;XM_005392138;XM_013518133 XP_005392194;XP_005392195;XP_013373587 MODEL 8804924 protein-coding LOC102010212 olfactory receptor 2B6-like NW_004955576 1169060 1171950 - 102010212 AGCD01075362;XM_005413949 XP_005414006 MODEL 8877987 protein-coding LOC102013390 uncharacterized LOC102013390 NW_004955409 845678 869527 + 102013390 AGCD01009168;GBDI01372716;XM_005376615;XM_005376617;XM_005376619;XM_005376621;XM_013510467;XM_013510468;XM_013510469;XM_013510470;XM_013510471;XM_013510472;XR_001232685;XR_001232686;XR_001232687 XP_005376672;XP_005376674;XP_005376676;XP_005376678;XP_013365921;XP_013365922;XP_013365923;XP_013365924;XP_013365925;XP_013365926 MODEL 8933076 ncrna LOC102004954 uncharacterized LOC102004954 NW_004955429 12838202 12852498 + 102004954 AGCD01028732;GBDI01266187;XR_261326 MODEL 15036846 trna Trnastop-uca transfer RNA opal suppressor (anticodon UCA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978847 8837445 protein-coding LOC102007489 melanoma antigen preferentially expressed in tumors-like NW_004955608 370665 408600 - 102007489 AGCD01077038;AGCD01077039;AGCD01077040;XM_013510119 XP_013365573 MODEL 8891467 pseudo LOC102011828 transcription initiation factor TFIID subunit 13 pseudogene NW_004955402 57682424 57682792 + 102011828 AGCD01001507 MODEL 8769330 protein-coding Rpl28 ribosomal protein L28 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955567 860351 862853 - 102022752 AGCD01074440;GBCE01003979;XM_005413320 XP_005413377 MODEL 8787737 ncrna LOC102008635 uncharacterized LOC102008635 NW_004955493 5964146 5970478 + 102008635 AGCD01061081;GBBH01168010;XR_264086 MODEL 730468928 snorna SNORA2 Small nucleolar RNA SNORA2/SNORA34 family 8869137 protein-coding Slc39a1 solute carrier family 39 member 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN embryonic cranial skeleton morphogenesis (ortholog); in utero embryonic development (ortholog); limb development (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Prostatic Neoplasms (ortholog); respiratory allergy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955545 556210 559732 - 102024613 AGCD01071800;GBDK01075053;XM_005411458;XM_013508228 XP_005411515;XP_013363682 MODEL 8838553 protein-coding Polr3a RNA polymerase III subunit A ENCODES a protein that exhibits 5'-3' RNA polymerase activity (ortholog); DNA-directed RNA polymerase activity (ortholog); DNA/RNA hybrid binding (ortholog); INVOLVED IN innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); termination of RNA polymerase III transcription (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alacrima (ortholog); Ataxia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 14446059 14483336 + 102021175 AGCD01034672;AGCD01034673;GBDI01264392;XM_005389899 XP_005389956 MODEL 8822157 pseudo LOC102022482 transcription initiation factor TFIID subunit 11 pseudogene NW_004955465 7669723 7670348 - 102022482 AGCD01050465 MODEL 730469231 snorna SNORA40 Small nucleolar RNA SNORA40 9025440 protein-coding Plpp5 phospholipid phosphatase 5 ENCODES a protein that exhibits diacylglycerol diphosphate phosphatase activity (ortholog); phosphatidate phosphatase activity (ortholog); INVOLVED IN phospholipid dephosphorylation (ortholog); FOUND IN plasma membrane (ortholog) NW_004955463 13859492 13864104 - 102023340 AGCD01049892;GBDJ01276219;XM_005398444;XM_005398446 XP_005398501;XP_005398503 MODEL 39133362 snrna U4 U4 spliceosomal RNA 626189154 snorna SNORD88 Small nucleolar RNA SNORD88 8997329 ncrna LOC102012202 uncharacterized LOC102012202 NW_004955420 8650206 8667134 - 102012202 AGCD01020729;AGCD01020730;GBDF01286252;XR_260684 MODEL 8856041 protein-coding Ptprn protein tyrosine phosphatase receptor type N ENCODES a protein that exhibits GTPase binding (ortholog); protein tyrosine phosphatase activity (ortholog); spectrin binding (ortholog); INVOLVED IN dense core granule maturation (ortholog); insulin secretion (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebrotendinous xanthomatosis (ortholog); colon adenocarcinoma (ortholog); FOUND IN axon terminus (ortholog); endosome (ortholog); Golgi apparatus (ortholog) NW_004955453 14126416 14145347 + 102008815 AGCD01044858;GBBH01175455;XM_005395533;XM_005395534;XM_005395537 XP_005395590;XP_005395591;XP_005395594 MODEL 9054629 protein-coding Sort1 sortilin 1 ENCODES a protein that exhibits cargo receptor activity (ortholog); enzyme binding (ortholog); nerve growth factor binding (ortholog); INVOLVED IN endocytosis (ortholog); endosome to lysosome transport (ortholog); endosome transport via multivesicular body sorting pathway (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Breast Cancer, Familial (ortholog); cardiovascular system disease (ortholog); FOUND IN cell surface (ortholog); cerebellar climbing fiber to Purkinje cell synapse (ortholog); clathrin-coated pit (ortholog) NW_004955435 12725952 12819280 - 102026666 AGCD01033163;AGCD01033164;AGCD01033165;AGCD01033166;AGCD01033167;GBBH01142331;GBCQ01063656;XM_013516443;XM_013516444 XP_013371897;XP_013371898 MODEL 8723248 ncrna LOC102006006 uncharacterized LOC102006006 NW_004955462 11471552 11476166 - 102006006 AGCD01049391;GBDF01209715;XR_001236585 MODEL 8817967 protein-coding LOC102009019 glycosylation-dependent cell adhesion molecule 1-like NW_004955458 1841699 1848240 - 102009019 AGCD01047206;GBCB01051309;XM_005397231 XP_005397288 MODEL 39133388 snrna U2 U2 spliceosomal RNA 39131968 snorna SNORD116 Small nucleolar RNA SNORD116 8823812 protein-coding LOC102004222 zinc finger protein 75D-like NW_004955602 279198 334998 + 102004222 AGCD01076768;AGCD01076769;AGCD01076770;AGCD01076771;AGCD01076772;AGCD01076773;AGCD01076774;AGCD01076775;AGCD01076776;GBDF01124561;XM_005414830;XM_005414831 XP_005414887;XP_005414888 MODEL 8838023 protein-coding Sema6b semaphorin 6B ENCODES a protein that exhibits semaphorin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); central nervous system development (ortholog); hippocampus development (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Ataxia (ortholog); cerebellar ataxia (ortholog); FOUND IN plasma membrane (ortholog) NW_004955495 4387147 4399430 + 102008329 AGCD01061920;AGCD01061921;GBCE01168220;GBDF01281169;XM_013505185 XP_013360639 MODEL 8963787 protein-coding Rhod ras homolog family member D ENCODES a protein that exhibits GTP binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament polymerization (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN early endosome (ortholog) NW_004955422 18343611 18353269 - 102026536 AGCD01022946;GBCQ01039817;XM_005384359 XP_005384416 MODEL 8723613 protein-coding C2cd5 C2 calcium dependent domain containing 5 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); intracellular protein transmembrane transport (ortholog); positive regulation of D-glucose import across plasma membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell cortex (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog) NW_004955413 17883411 17972865 - 102022582 AGCD01014165;AGCD01014166;GBDJ01129965;GBDJ01129976;XM_005379074 XP_005379131 MODEL 9019728 protein-coding LOC102004956 olfactory receptor 5B2-like NW_004955511 3124063 3128525 - 102004956 AGCD01066444;XM_013506383 XP_013361837 MODEL 8832321 pseudo LOC102013392 ribosomal L1 domain-containing protein 1 pseudogene NW_004955409 26666765 26667942 - 102013392 AGCD01010196 MODEL 8968201 protein-coding LOC102011390 kynurenine/alpha-aminoadipate aminotransferase, mitochondrial-like NW_004955403 36263930 36284758 + 102011390 AGCD01002535;AGCD01002536;GBCQ01008057;GBCQ01008066;XM_013513334 XP_013368788 MODEL 8764356 protein-coding Rasef RAS and EF-hand domain containing ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); identical protein binding (ortholog); INVOLVED IN zymogen granule exocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955530 690748 747415 + 102012359 AGCD01069863;AGCD01069864;GBBH01098179;XM_013507551;XM_013507552;XM_013507553;XM_013507554;XM_013507555;XM_013507556 XP_013363005;XP_013363006;XP_013363007;XP_013363008;XP_013363009;XP_013363010 MODEL 8881808 ncrna LOC102005660 uncharacterized LOC102005660 NW_004955404 45053525 45082173 - 102005660 AGCD01004437;XR_001234995;XR_259339 MODEL 8945799 protein-coding LOC102018405 uncharacterized protein C2orf78-like NW_004955486 1403402 1408342 - 102018405 AGCD01058952;AGCD01058953;XM_013504140 XP_013359594 MODEL 8985724 protein-coding LOC102019937 olfactory receptor 8K1-like NW_004955511 1459503 1460444 + 102019937 AGCD01066367;XM_013506406 XP_013361860 MODEL 8944509 protein-coding Rdx radixin ENCODES a protein that exhibits actin binding (ortholog); ATPase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN apical protein localization (ortholog); barbed-end actin filament capping (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 24 (ortholog); cervical cancer (ortholog); cholestasis (ortholog); FOUND IN adherens junction (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955412 12100436 12184444 - 102009923 AGCD01012805;AGCD01012806;AGCD01012807;AGCD01012808;AGCD01012809;AGCD01012810;AGCD01012811;AGCD01012812;GBCB01000997;XM_005378052;XM_005378053;XM_013511100;XM_013511101;XM_013511102 XP_005378109;XP_005378110;XP_013366554;XP_013366555;XP_013366556 MODEL 9017909 pseudo LOC102003193 proliferation-associated protein 2G4 pseudogene NW_004955450 4817696 4818898 + 102003193 AGCD01042479;AGCD01042480 MODEL 616940617 snorna SNORA68 Small nucleolar RNA SNORA68 8852628 ncrna LOC102010215 uncharacterized LOC102010215 NW_004955449 8016115 8072779 - 102010215 AGCD01042007;AGCD01042008;XR_262494 MODEL 9058021 ncrna LOC102016447 uncharacterized LOC102016447 NW_004955407 25449838 25458467 - 102016447 AGCD01007510;GBDF01226215;XR_001231470;XR_259581;XR_259583 MODEL 8941360 protein-coding Rsrc2 arginine and serine rich coiled-coil 2 ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955482 6119810 6138984 + 102029182 AGCD01057374;GBDF01053615;XM_005403076;XM_005403077;XM_013503706 XP_005403133;XP_005403134;XP_013359160 MODEL 8941545 ncrna LOC102008254 uncharacterized LOC102008254 NW_004955436 16825530 16828910 + 102008254 AGCD01033933;GBDF01144258;XR_261796 MODEL 8923840 protein-coding Pklr pyruvate kinase L/R ENCODES a protein that exhibits monosaccharide binding (ortholog); pyruvate kinase activity (ortholog); INVOLVED IN cellular response to epinephrine stimulus (ortholog); cellular response to insulin stimulus (ortholog); glycolytic process (ortholog); PARTICIPATES IN Fanconi syndrome pathway; forkhead class A signaling pathway; glycogen storage disease type VII pathway; ASSOCIATED WITH amenorrhea (ortholog); anemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955545 1742432 1749632 - 102004859 AGCD01071869;GBCQ01174475;XM_005411597;XM_005411598;XM_013508344;XM_013508345;XM_013508346;XM_013508347 XP_005411654;XP_005411655;XP_013363798;XP_013363799;XP_013363800;XP_013363801 MODEL 9051180 protein-coding LOC102010985 C-type lectin domain family 2 member F-like NW_004955413 7883706 7902234 + 102010985 AGCD01013835;GBDK01420751;XM_013511366;XM_013511367 XP_013366820;XP_013366821 MODEL 8743813 protein-coding Rpl29 ribosomal protein L29 ENCODES a protein that exhibits heparin binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cell population proliferation (ortholog); cell-substrate adhesion (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955532 3633260 3636068 - 102025617 AGCD01070292;GBCB01003564;XM_005410341;XM_005410342 XP_005410398;XP_005410399 MODEL 730469236 snorna SNORA40 Small nucleolar RNA SNORA40 151707880 snorna SNORD89 Small nucleolar RNA SNORD89 39131449 protein-coding RNF146 ring finger protein 146 39133364 snrna U4 U4 spliceosomal RNA 8727936 protein-coding Prmt8 protein arginine methyltransferase 8 ENCODES a protein that exhibits enzyme binding (ortholog); histone H4 methyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN regulation of modification of postsynaptic actin cytoskeleton (ortholog); ASSOCIATED WITH Cocaine-Related Disorders (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) NW_004955413 1323436 1409188 + 102025449 AGCD01013520;AGCD01013521;GBDF01034290;XM_005378717 XP_005378774 MODEL 9065783 protein-coding Ercc5 ERCC excision repair 5, endonuclease ENCODES a protein that exhibits bubble DNA binding (ortholog); damaged DNA binding (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN base-excision repair, AP site formation (ortholog); determination of adult lifespan (ortholog); DNA repair (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH cerebrooculofacioskeletal syndrome 3 (ortholog); Cockayne syndrome (ortholog); Colorectal Neoplasms (ortholog); FOUND IN chromosome (ortholog); DNA replication factor A complex (ortholog); nucleoplasm (ortholog) NW_004955404 8294506 8321505 - 102028608 AGCD01003350;GBDK01132700;XM_005374021 XP_005374078 MODEL 8706583 protein-coding LOC102012203 dual specificity protein phosphatase 5-like NW_004955485 904628 909295 - 102012203 AGCD01058465;GBDK01430993;XM_005403917 XP_005403974 MODEL 8724161 protein-coding LOC102022485 intelectin-1a-like NW_004955468 12676510 12685740 - 102022485 AGCD01052176;GBCQ01163630;XM_005400223;XM_005400224;XM_013522494 XP_005400280;XP_005400281;XP_013377948 MODEL 8953547 protein-coding Treml4 triggering receptor expressed on myeloid cells like 4 INVOLVED IN intracellular protein localization (ortholog); phagocytosis, engulfment (ortholog); positive regulation of defense response to virus by host (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); uterine carcinosarcoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955437 7827329 7846406 - 102010521 AGCD01034469;GBDK01021729;XM_005389682;XM_013517108;XM_013517109 XP_005389739;XP_013372562;XP_013372563 MODEL 8967293 protein-coding Spink7 serine peptidase inhibitor Kazal type 7 INVOLVED IN inflammatory response (ortholog); negative regulation of cytokine production involved in inflammatory response (ortholog); FOUND IN extracellular region (ortholog) NW_004955415 5954880 5958319 + 102006340 AGCD01016004;GBDJ01221132;XM_013512295 XP_013367749 MODEL 10251910 protein-coding LOC106147493 leukocyte immunoglobulin-like receptor subfamily A member 5 NW_004955567 1756350 1772884 + 106147493 AGCD01074489;XM_013509314 XP_013364768 MODEL 8721183 protein-coding Phldb3 pleckstrin homology like domain family B member 3 ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955555 1241728 1261531 - 102015777 AGCD01073067;AGCD01073068;GBDI01004272;XM_005412439;XM_013508778;XM_013508779 XP_005412496;XP_013364232;XP_013364233 MODEL 8891689 protein-coding Lpp LIM domain containing preferred translocation partner in lipoma PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955420 19014398 19634102 - 102020674 AGCD01021053;AGCD01021054;AGCD01021055;AGCD01021056;AGCD01021057;AGCD01021058;AGCD01021059;AGCD01021060;AGCD01021061;AGCD01021062;AGCD01021063;AGCD01021064;AGCD01021065;AGCD01021066;GBDK01265106;XM_005383241;XM_005383243 XP_005383298;XP_005383300 MODEL 8917437 protein-coding Ppp1r7 protein phosphatase 1 regulatory subunit 7 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome (ortholog) NW_004955542 520605 539699 - 102011697 AGCD01071474;GBDK01076342;XM_005411141;XM_013508062;XM_013508063;XM_013508064 XP_005411198;XP_013363516;XP_013363517;XP_013363518 MODEL 15036845 trna Trnastop-uua transfer RNA ochre suppressor(anticodon UUA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978849 8894367 protein-coding LOC102004225 PRAME family member 3-like NW_004955615 103500 106083 - 102004225 AGCD01077249;XM_005414980 XP_005415037 MODEL 730469125 snorna SNORA2 Small nucleolar RNA SNORA2/SNORA34 family 8769525 protein-coding LOC102006357 cytochrome c oxidase subunit 6A2, mitochondrial ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 18 (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex IV (ortholog) NW_004955493 8261297 8261961 - 102006357 AGCD01061282;GBCB01005316;XM_005405318 XP_005405375 MODEL 8743211 protein-coding Psmb2 proteasome 20S subunit beta 2 ENCODES a protein that exhibits structural constituent of proteasome (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 13688218 13725318 - 102021514 AGCD01044431;GBBH01033049;XM_005395153 XP_005395210 MODEL 8888937 ncrna LOC102013393 uncharacterized LOC102013393 NW_004955410 13697777 13709802 - 102013393 AGCD01010893;GBDF01251247;XR_259838 MODEL 8991169 protein-coding Polr3b RNA polymerase III subunit B ENCODES a protein that exhibits 5'-3' RNA polymerase activity (ortholog); DNA-directed RNA polymerase activity (ortholog); DNA/RNA hybrid binding (ortholog); INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); snRNA transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); amblyopia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); RNA polymerase III complex (ortholog) NW_004955405 40353289 40451445 + 102021939 AGCD01005515;AGCD01005516;AGCD01005517;GBDF01078628;XM_005374620;XM_013519054 XP_005374677;XP_013374508 MODEL 8861736 protein-coding LOC102019591 olfactory receptor 52K1-like NW_004955414 19909126 19910145 - 102019591 AGCD01015341;XM_005380459 XP_005380516 MODEL 8870400 pseudo LOC102011391 dnaJ homolog subfamily B member 6-like NW_004955451 11366508 11386075 + 102011391 AGCD01043350;AGCD01043351;AGCD01043352 MODEL 8947445 protein-coding Sgsm1 small G protein signaling modulator 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog) NW_004955455 258472 343079 - 102011400 AGCD01045555;GBDF01281537;XM_005396135;XM_005396136 XP_005396192;XP_005396193 MODEL 8790384 protein-coding LOC102005661 hematopoietic prostaglandin D synthase-like NW_004955405 437618 453991 + 102005661 AGCD01004560;GBDK01126143;XM_005374245;XR_001235167;XR_001235168;XR_259351 XP_005374302 MODEL 39133390 snrna U2 U2 spliceosomal RNA 8844673 protein-coding LOC102006008 cysteine-rich secretory protein 2 NW_004955411 8242364 8257545 + 102006008 AGCD01011720;GBDF01010088;XM_005377669;XM_005377670;XM_005377671;XM_013510701;XM_013510702 XP_005377726;XP_005377727;XP_005377728;XP_013366155;XP_013366156 MODEL 8789865 protein-coding Prmt9 protein arginine methyltransferase 9 ENCODES a protein that exhibits protein-arginine N-methyltransferase activity (ortholog); protein-arginine omega-N symmetric methyltransferase activity (ortholog); INVOLVED IN mRNA processing (ortholog); ASSOCIATED WITH Cocaine-Related Disorders (ortholog); Meckel syndrome 9 (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog) NW_004955428 3215335 3243569 - 102012456 AGCD01027650;GBDF01251549;XM_005386669 XP_005386726 MODEL 8982303 pseudo LOC102007492 serine/threonine-protein kinase pim-2 pseudogene NW_004955769 5 841 - 102007492 AGCD01078313;XM_005415103 MODEL 9012513 pseudo LOC102011829 cytochrome c oxidase subunit 7A2, mitochondrial pseudogene NW_004955402 1161682 1162083 - 102011829 AGCD01000049;XM_005373139 MODEL 8995124 pseudo LOC102019938 vesicle-trafficking protein SEC22b pseudogene NW_004955513 2495130 2495635 + 102019938 AGCD01066880 MODEL 616940641 snorna SNORA69 Small nucleolar RNA SNORA69 8897919 protein-coding Sema6c semaphorin 6C ENCODES a protein that exhibits semaphorin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); negative regulation of axon extension (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog) NW_004955588 490581 504436 - 102006845 AGCD01076114;AGCD01076115;GBCB01005149;GBDF01125414;XM_013509907 XP_013365361 MODEL 8948531 protein-coding LOC102003196 alanyl-tRNA editing protein Aarsd1-like NW_004955451 16762844 16769585 - 102003196 AGCD01043704;AGCD01043705;GBDJ01008508;XM_013519243 XP_013374697 MODEL 9021138 protein-coding Rhof ras homolog family member F, filopodia associated INVOLVED IN actin filament organization (ortholog) NW_004955482 6631327 6643634 + 102003447 AGCD01057408;AGCD01057409;GBBH01188779;GBDF01044096;XM_005403257 XP_005403314 MODEL 9001375 protein-coding LOC102004957 ral guanine nucleotide dissociation stimulator-like NW_004955430 7909582 7912000 - 102004957 AGCD01029377;GBDF01163102;XM_013515594 XP_013371048 MODEL 8870401 protein-coding Srsf7 serine and arginine rich splicing factor 7 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); RNA splicing (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955441 6416709 6423185 - 102011592 AGCD01036918;AGCD01036919;AGCD01036920;GBCC01000687;XM_005390889;XM_005390891;XR_001235300;XR_001235301 XP_005390946;XP_005390948 MODEL 8887516 protein-coding Plpp6 phospholipid phosphatase 6 ENCODES a protein that exhibits farnesyl diphosphatase activity (ortholog); hydrolase activity (ortholog); isoprenoid diphosphate phosphatase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); farnesyl diphosphate catabolic process (ortholog); geranyl diphosphate metabolic process (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) NW_004955434 8953069 8955866 + 102024606 AGCD01032281;GBCE01162872;XM_005415386 XP_005415443 MODEL 8843280 protein-coding Rsrp1 arginine and serine rich protein 1 INVOLVED IN spliceosomal complex assembly (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular dysplasia 14 (ortholog); Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955452 4865330 4871049 - 102016127 AGCD01043997;AGCD01043998;GBBH01030866;GBCQ01035581;XM_013519667 XP_013375121 MODEL 9013929 protein-coding Ptprn2 protein tyrosine phosphatase receptor type N2 INVOLVED IN insulin secretion involved in cellular response to glucose stimulus (ortholog); negative regulation of GTPase activity (ortholog); neurotransmitter secretion (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); presynapse (ortholog); secretory granule (ortholog) NW_004955579 366441 862837 - 102006083 AGCD01075546;AGCD01075547;AGCD01075548;AGCD01075549;AGCD01075550;AGCD01075551;AGCD01075552;AGCD01075553;AGCD01075554;AGCD01075555;AGCD01075556;AGCD01075557;GBDF01250942;XM_005414104 XP_005414161 MODEL 8945075 protein-coding Rasgef1a RasGEF domain family member 1A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cell migration (ortholog); positive regulation of Ras protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955546 1304126 1332436 - 102006827 AGCD01072047;AGCD01072048;GBDI01288475;XM_013508392;XM_013508393 XP_013363846;XP_013363847 MODEL 39131967 snorna SNORD116 Small nucleolar RNA SNORD116 8847831 protein-coding Rpl3 ribosomal protein L3 ENCODES a protein that exhibits 5S rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955413 25217777 25224052 - 102028075 AGCD01014399;GBCE01000155;XM_005379286 XP_005379343 MODEL 8952691 protein-coding Tle7 TLE family member 7 NW_004955484 4138324 4150092 - 102009184 AGCD01058202;AGCD01058203;GBDF01074192;GBDJ01410386;NM_001370855;XM_013503981 NP_001357784;XP_013359435 VALIDATED 8958015 protein-coding Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); B cell receptor signaling pathway (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnodactyly (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); GTPase complex (ortholog) NW_004955441 6649895 6724271 - 102013878 AGCD01036937;AGCD01036938;GBCB01041404;XM_005391044 XP_005391101 MODEL 730469020 snorna SNORD89 Small nucleolar RNA SNORD89 8927680 pseudo LOC102018407 probable C-mannosyltransferase DPY19L2 pseudogene NW_004955493 1188575 1191835 + 102018407 AGCD01060884 MODEL 8703468 protein-coding Ercc6 ERCC excision repair 6, chromatin remodeling factor ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); INVOLVED IN base-excision repair (ortholog); DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); age related macular degeneration 5 (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN B-WICH complex (ortholog); chromosome (ortholog); nuclear body (ortholog) NW_004955556 745175 812215 + 102029672 AGCD01073179;GBCE01126926;XM_005412569 XP_005412626 MODEL 9013697 protein-coding Wdr77 WD repeat domain 77 ENCODES a protein that exhibits methyl-CpG binding (ortholog); transcription coactivator activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of epithelial cell proliferation involved in prostate gland development (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); lymphoma (ortholog); FOUND IN Cul4B-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955435 14929202 14940439 - 102027005 AGCD01033258;GBDF01183170;XM_005388949;XM_013516496 XP_005389006;XP_013371950 MODEL 10384357 pseudo LOC102010218 Ig heavy chain V-III region 23-like NW_004957635 267 750 + 102010218 AGCD01081031 MODEL 8799405 protein-coding Rec114 REC114 meiotic recombination protein INVOLVED IN meiotic DNA double-strand break formation (ortholog); oogenesis (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 10 (ortholog); FOUND IN chromosome (ortholog) NW_004955450 4002734 4076292 - 102023415 AGCD01042453;AGCD01042454;GBDF01155136;XM_005393591;XM_005393592;XM_005393593;XM_005393594 XP_005393648;XP_005393649;XP_005393650;XP_005393651 MODEL 39131495 protein-coding C2orf69 chromosome 2 open reading frame 69 8779019 protein-coding LOC102004229 leukocyte immunoglobulin-like receptor subfamily A member 6 NW_004957048 669 1949 - 102004229 AGCD01080444;GBCE01054558;GBDJ01017271;XM_013510242 XP_013365696 MODEL 730469242 snorna SNORA2 Small nucleolar RNA SNORA2/SNORA34 family 8808126 pseudo LOC102010986 tubulin polyglutamylase complex subunit 2 pseudogene NW_004955468 4276509 4282049 + 102010986 AGCD01051904 MODEL 8883029 protein-coding Ercc6l ERCC excision repair 6 like, spindle assembly checkpoint helicase ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA translocase activity (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung adenocarcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN chromosome (ortholog) NW_004955475 11596405 11629186 - 102012755 AGCD01055158;AGCD01055159;AGCD01055160;AGCD01055161;AGCD01055162;GBDI01367112;XM_005401684 XP_005401741 MODEL 8965225 protein-coding LOC102009024 pentatricopeptide repeat-containing protein 1, mitochondrial NW_004955460 15091557 15111456 - 102009024 AGCD01048768;GBDI01065355;XM_005397942;XM_005397943 XP_005397999;XP_005398000 MODEL 9019886 protein-coding Rnf148 ring finger protein 148 NW_004955479 4322099 4323349 - 102011115 AGCD01056320;GBDF01050598;XM_005402321 XP_005402378 MODEL 8833028 ncrna LOC102012206 uncharacterized LOC102012206 NW_004955421 24912739 24916609 - 102012206 AGCD01022223;XR_260826 MODEL 8933714 protein-coding Slc39a10 solute carrier family 39 member 10 ENCODES a protein that exhibits protein tyrosine phosphatase activator activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); intracellular zinc ion homeostasis (ortholog); negative regulation of B cell apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955403 4426538 4479693 - 102021070 AGCD01001786;AGCD01001787;GBCB01119952;XM_005373283;XM_005373284 XP_005373340;XP_005373341 MODEL 8886301 ncrna LOC102005663 uncharacterized LOC102005663 NW_004955405 42749975 42752628 - 102005663 AGCD01005586;GBDF01179322;XR_259461 MODEL 8861182 protein-coding LOC102022486 taste receptor type 2 member 8-like NW_004955413 7969812 7970744 - 102022486 AGCD01013841;XM_005379624 XP_005379681 MODEL 8901398 protein-coding Rpl30 ribosomal protein L30 ENCODES a protein that exhibits selenocysteine insertion sequence binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cytoplasmic translation (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); herpes simplex (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) NW_004955417 13764814 13767698 - 102009281 AGCD01018191;GBDF01007139;XM_005381844 XP_005381901 MODEL 9006180 protein-coding Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN circadian rhythm (ortholog); entrainment of circadian clock (ortholog); hippocampus development (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); nuclear membrane (ortholog) NW_004955402 46563918 46773349 + 102008802 AGCD01001160;AGCD01001161;AGCD01001162;AGCD01001163;AGCD01001164;AGCD01001165;AGCD01001166;AGCD01001167;GBCE01044666;GBDF01080387;XM_013511215 XP_013366669 MODEL 8758171 protein-coding LOC102011830 leucine-rich repeat-containing protein 37A3-like NW_004955651 5178 17838 + 102011830 AGCD01077802;AGCD01077803;AGCD01077804;AGCD01077805;AGCD01077806;AGCD01077807;AGCD01077808;GBDF01009797;XM_013510174 XP_013365628 MODEL 9002377 protein-coding Ppp1r8 protein phosphatase 1 regulatory subunit 8 ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); protein phosphatase regulator activity (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN cell population proliferation (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955452 7022114 7042770 + 102009908 AGCD01044131;GBBH01186991;XM_005394930;XM_005394931 XP_005394987;XP_005394988 MODEL 9046561 ncrna LOC102006358 uncharacterized LOC102006358 NW_004955494 958163 966632 + 102006358 AGCD01061389;GBDI01027847;XR_264101 MODEL 8811858 ncrna LOC102003197 uncharacterized LOC102003197 NW_004955404 43067814 43068635 - 102003197 AGCD01004373;GBDF01288559;XR_259335 MODEL 730469249 snorna SNORA40 Small nucleolar RNA SNORA40 8762004 ncrna LOC102004962 uncharacterized LOC102004962 NW_004955432 17596653 17600631 - 102004962 AGCD01031128;GBDF01122165;XR_261532 MODEL 9029606 pseudo LOC102019594 uncharacterized protein KIAA1143 pseudogene NW_004955475 12157531 12158860 + 102019594 AGCD01055183 MODEL 39133370 snrna U4 U4 spliceosomal RNA 8919161 protein-coding Polr3c RNA polymerase III subunit C ENCODES a protein that exhibits single-stranded DNA binding (ortholog); INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); termination of RNA polymerase III transcription (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase III complex (ortholog) NW_004955568 242834 263053 - 102021492 AGCD01074506;AGCD01074507;AGCD01074508;AGCD01074509;GBCB01109428;GBDJ01127774;XM_013509335 XP_013364789 MODEL 39133392 snrna U2 U2 spliceosomal RNA 9001458 protein-coding Spink8 serine peptidase inhibitor Kazal type 8 (putative) ASSOCIATED WITH cholangiocarcinoma (ortholog) NW_004955420 24283223 24298948 + 102007666 AGCD01021288;AGCD01021289;AGCD01021290;GBCB01057695;GBCQ01003584;XM_013513475 XP_013368929 MODEL 8817072 protein-coding Rsu1 Ras suppressor protein 1 INVOLVED IN cell-matrix adhesion (ortholog); positive regulation of neural precursor cell proliferation (ortholog); Ras protein signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chloracne (ortholog); FOUND IN focal adhesion (ortholog) NW_004955429 11043205 11234698 + 102029209 AGCD01028685;GBBH01187919;XM_005386967;XM_005386968;XR_261324 XP_005387024;XP_005387025 MODEL 8928379 protein-coding Rasgef1b RasGEF domain family member 1B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955433 5605548 6388880 - 102030339 AGCD01031513;AGCD01031514;AGCD01031515;AGCD01031516;AGCD01031517;AGCD01031518;AGCD01031519;AGCD01031520;AGCD01031521;AGCD01031522;AGCD01031523;AGCD01031524;AGCD01031525;AGCD01031526;AGCD01031527;AGCD01031528;AGCD01031529;AGCD01031530;AGCD01031531;AGCD01031532;AGCD01031533;GBCE01011897;XM_005388230;XM_005388233;XM_005388234;XM_013516120;XM_013516121 XP_005388287;XP_005388290;XP_005388291;XP_013371574;XP_013371575 MODEL 8825690 protein-coding Sgsm2 small G protein signaling modulator 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN late endosome to Golgi transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); melanosome (ortholog) NW_004955481 871719 907326 - 102010902 AGCD01056816;GBDF01081055;XM_005402592;XM_005402593;XM_005402594 XP_005402649;XP_005402650;XP_005402651 MODEL 39131707 snorna SNORD90 Small nucleolar RNA SNORD90 9059192 protein-coding LOC102006012 C-type lectin domain family 10 member A NW_004955467 9788155 9791911 + 102006012 AGCD01051525;GBDK01397253;XM_005399570 XP_005399627 MODEL 10296267 protein-coding LOC106147494 leukocyte immunoglobulin-like receptor subfamily A member 5 NW_004955567 1820363 1824975 + 106147494 AGCD01074491;GBDF01000431;XM_013509315 XP_013364769 MODEL 8942198 protein-coding LOC102008255 steroid 21-hydroxylase ENCODES a protein that exhibits 17-hydroxyprogesterone 21-hydroxylase activity (ortholog); heme binding (ortholog); progesterone 21-hydroxylase activity (ortholog); INVOLVED IN C21-steroid hormone biosynthetic process (ortholog); cellular response to peptide hormone stimulus (ortholog); cortisol biosynthetic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH anxiety disorder (ortholog); autism spectrum disorder (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955437 513052 516792 + 102008255 AGCD01034140;GBCE01017755;XM_005389407 XP_005389464 MODEL 8916773 protein-coding LOC102018410 vomeronasal type-2 receptor 116-like NW_004955495 45276 78599 - 102018410 AGCD01061594;AGCD01061595;AGCD01061596;XM_013505040 XP_013360494 MODEL 8714450 trna Trnat-agu transfer RNA threonine (anticodon AGU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978810 AGCD01035275;AGCD01037196;AGCD01050588;AGCD01050597;AGCD01051466;AGCD01051472;AGCD01051842;AGCD01057606;AGCD01071886 MODEL 8925764 ncrna LOC102019944 uncharacterized LOC102019944 NW_004955521 4529085 4554924 + 102019944 AGCD01068269;AGCD01068270;AGCD01068271;GBDF01076829;XR_264609 MODEL 8717885 protein-coding LOC102016449 mucin-17 NW_004955456 16203150 16214796 - 102016449 AGCD01046694;GBDF01024236;XM_005396900 XP_005396957 MODEL 730469202 snorna SNORA7 Small nucleolar RNA SNORA7 8946228 protein-coding Lpxn leupaxin ENCODES a protein that exhibits transcription coregulator activity (ortholog); INVOLVED IN negative regulation of B cell receptor signaling pathway (ortholog); negative regulation of cell adhesion (ortholog); regulation of cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955511 3459521 3500181 - 102003676 AGCD01066461;AGCD01066462;AGCD01066463;AGCD01066464;GBDJ01229881;XM_005408039;XM_005408040;XM_013506480;XM_013506481;XM_013506483 XP_005408096;XP_005408097;XP_013361934;XP_013361935;XP_013361937 MODEL 9022864 protein-coding Sema6d semaphorin 6D ENCODES a protein that exhibits receptor ligand activity (ortholog); semaphorin receptor binding (ortholog); INVOLVED IN negative regulation of axon extension (ortholog); negative regulation of smooth muscle cell migration (ortholog); positive regulation of smooth muscle cell migration (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog) NW_004955409 6086178 6143702 - 102015930 AGCD01009330;GBCE01134341;XM_005376714;XM_005376717;XM_005376718;XM_005376719;XM_005376720;XM_013510307;XM_013510308;XM_013510309;XM_013510310;XM_013510311 XP_005376771;XP_005376774;XP_005376775;XP_005376776;XP_005376777;XP_013365761;XP_013365762;XP_013365763;XP_013365764;XP_013365765 MODEL 9020772 pseudo LOC102013402 DNA-directed RNA polymerase III subunit RPC7 pseudogene NW_004955413 383694 386168 - 102013402 AGCD01013462 MODEL 8942271 protein-coding Rec8 REC8 meiotic recombination protein INVOLVED IN double-strand break repair via homologous recombination (ortholog); fertilization (ortholog); homologous chromosome pairing at meiosis (ortholog); ASSOCIATED WITH azoospermia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); condensed chromosome (ortholog); condensed chromosome, centromeric region (ortholog) NW_004955409 36223783 36231749 - 102011511 AGCD01010453;GBCE01171312;XM_013510405;XM_013510406 XP_013365859;XP_013365860 MODEL 8912923 protein-coding Psmb3 proteasome 20S subunit beta 3 ENCODES a protein that exhibits structural constituent of proteasome (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); proteasome complex (ortholog) NW_004955451 13835173 13841626 + 102019348 AGCD01043507;AGCD01043508;GBBH01001656;XM_005394282 XP_005394339 MODEL 8724722 ncrna LOC102011392 uncharacterized LOC102011392 NW_004955404 682584 698750 + 102011392 AGCD01003207;XR_259283 MODEL 8729790 protein-coding Plpp7 phospholipid phosphatase 7 (inactive) ENCODES a protein that exhibits lipid phosphatase activity (ortholog); INVOLVED IN negative regulation of myotube differentiation (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nuclear envelope (ortholog) NW_004955513 1081748 1092025 + 102021379 AGCD01066840;AGCD01066841;GBCB01005805;XM_005408361 XP_005408418 MODEL 8715298 protein-coding Ptpro protein tyrosine phosphatase receptor type O ENCODES a protein that exhibits cadherin binding (ortholog); protein homodimerization activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN axon guidance (ortholog); cell morphogenesis (ortholog); glomerulus development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); dendritic spine (ortholog); GABA-ergic synapse (ortholog) NW_004955413 12019026 12248026 + 102005022 AGCD01013977;AGCD01013978;AGCD01013979;AGCD01013980;AGCD01013981;AGCD01013982;AGCD01013983;AGCD01013984;AGCD01013985;GBDJ01377144;XM_005379017;XM_013511680;XM_013511681 XP_005379074;XP_013367134;XP_013367135 MODEL 8816785 ncrna LOC102019600 uncharacterized LOC102019600 NW_004955484 5180341 5313392 - 102019600 AGCD01058248;AGCD01058249;AGCD01058250;AGCD01058251;AGCD01058252;GBDF01193757;XR_263887;XR_263888 MODEL 39133394 snrna U2 U2 spliceosomal RNA 8903392 protein-coding LOC102008637 C-type lectin domain family 2 member L NW_004955494 3562862 3573552 - 102008637 AGCD01061476;AGCD01061477;GBCE01072603;GBCQ01101254;XM_013504909 XP_013360363 MODEL 8932588 protein-coding Sos2 SOS Ras/Rho guanine nucleotide exchange factor 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); insulin receptor signaling pathway (ortholog); lymphocyte homeostasis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; insulin signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autistic disorder (ortholog) NW_004955409 12542353 12622165 + 102029054 AGCD01009552;AGCD01009553;AGCD01009554;AGCD01009555;AGCD01009556;GBBH01006505;GBCE01103866;XM_013510338 XP_013365792 MODEL 8777213 protein-coding Tlk1 tousled like kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN SNARE complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955449 3694624 3840468 + 102022033 AGCD01041863;AGCD01041864;AGCD01041865;AGCD01041866;AGCD01041867;AGCD01041868;GBDK01190119;XM_005393240 XP_005393297 MODEL 8935190 pseudo LOC102007494 glycoprotein endo-alpha-1,2-mannosidase pseudogene NW_004955403 21715243 21717598 - 102007494 AGCD01002203;XM_005373891 MODEL 8760333 protein-coding Pkm pyruvate kinase M1/2 ENCODES a protein that exhibits ADP binding (ortholog); histone H3T11 kinase activity (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); canonical glycolysis (ortholog); glucose metabolic process (ortholog); PARTICIPATES IN glycolysis pathway; hypoxia inducible factor pathway; pyruvate metabolic pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); carcinoma (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 4907962 4935179 + 102004440 AGCD01042486;GBCQ01008781;XM_005393620;XM_005393621;XM_005393622;XM_005393623 XP_005393677;XP_005393678;XP_005393679;XP_005393680 MODEL 8758141 pseudo LOC102010222 small nuclear ribonucleoprotein Sm D1 pseudogene NW_004955405 4117051 4117475 - 102010222 AGCD01004644;XM_005374670 MODEL 730469533 snorna SNORD91 Small nucleolar RNA SNORD91 family 153211025 protein-coding C2orf81 chromosome 2 open reading frame 81 8856865 protein-coding Rhog ras homolog family member G ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell chemotaxis (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); Common Variable Immunodeficiency 15 (ortholog); exanthem (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955414 19630564 19641722 - 102010894 AGCD01015326;GBCE01032932;XM_005380036;XM_005380037 XP_005380093;XP_005380094 MODEL 8968573 trna Trnat-cgu transfer RNA threonine (anticodon CGU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955442;NW_004955465;NW_004955465;NW_004955481 4512289;13846174;13285428;6565067 4512360;13846247;13285500;6565138 -;+;+;+ 101978813 AGCD01037528;AGCD01050597;AGCD01050627;AGCD01057031 MODEL 8843329 protein-coding LOC102018412 gastrokine-3-like NW_004955424 16081754 16088325 - 102018412 AGCD01024737;GBDI01336159;XM_005385655 XP_005385712 MODEL 8728036 pseudo LOC102003198 methylmalonic aciduria and homocystinuria type D protein, mitochondrial pseudogene NW_004955404 48607830 48609942 - 102003198 AGCD01004506 MODEL 626189163 snorna SNORA41 Small nucleolar RNA SNORA41 39131966 snorna SNORD116 Small nucleolar RNA SNORD116 8777792 protein-coding Trerf1 transcriptional regulating factor 1 ENCODES a protein that exhibits nuclear progesterone receptor binding (ortholog); transcription coactivator activity (ortholog); transcription coactivator binding (ortholog); INVOLVED IN cellular response to progesterone stimulus (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 8411951 8600283 - 102018648 AGCD01034489;AGCD01034490;AGCD01034491;AGCD01034492;GBDF01084113;GBDK01059855;XM_013516789 XP_013372243 MODEL 8968218 ncrna LOC102012211 uncharacterized LOC102012211 NW_004955422 23635752 23644682 - 102012211 AGCD01023199;GBCQ01013438;XR_260906 MODEL 8931922 protein-coding Ercc6l2 ERCC excision repair 6 like 2 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); DNA damage response (ortholog); double-strand break repair via classical nonhomologous end joining (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); atrial heart septal defect (ortholog); FOUND IN centrosome (ortholog); chromosome, centromeric region (ortholog); cytoplasm (ortholog) NW_004955422 22753008 22890339 + 102007243 AGCD01023165;AGCD01023166;AGCD01023167;AGCD01023168;AGCD01023169;AGCD01023170;AGCD01023171;AGCD01023172;GBDJ01044876;XM_005384686;XM_013514250;XM_013514251;XM_013514252 XP_005384743;XP_013369704;XP_013369705;XP_013369706 MODEL 9032245 protein-coding LOC102009028 uncharacterized LOC102009028 NW_004955411 2334442 2389596 - 102009028 AGCD01011505;AGCD01011506;XM_013510712 XP_013366166 MODEL 8876120 protein-coding Rnf149 ring finger protein 149 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); negative regulation of MAPK cascade (ortholog); regulation of protein stability (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955470 7051552 7074187 - 102029172 AGCD01052790;AGCD01052791;GBBH01172773;GBDF01008173;XM_013522794 XP_013378248 MODEL 8941727 protein-coding Slc39a11 solute carrier family 39 member 11 ENCODES a protein that exhibits copper ion transmembrane transporter activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN zinc ion import across plasma membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleus (ortholog) NW_004955478 123873 489704 + 102018284 AGCD01055732;AGCD01055733;AGCD01055734;AGCD01055735;AGCD01055736;AGCD01055737;AGCD01055738;GBDF01053360;XM_005402092;XM_005402093;XM_005402094;XM_005402095;XM_013503238;XM_013503239 XP_005402149;XP_005402150;XP_005402151;XP_005402152;XP_013358692;XP_013358693 MODEL 8834980 protein-coding LOC102022491 olfactory receptor 52I1-like NW_004955414 20188826 20191310 + 102022491 AGCD01015360;XM_013512019 XP_013367473 MODEL 9003764 protein-coding LOC102004231 alpha-L-fucosidase-like NW_004955403 19942836 19945318 + 102004231 AGCD01002152;XM_013514776 XP_013370230 MODEL 8813619 protein-coding Wdr81 WD repeat domain 81 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN aggrephagy (ortholog); early endosome to late endosome transport (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); anxiety disorder (ortholog); aplastic anemia (ortholog); FOUND IN autophagosome membrane (ortholog); cytosol (ortholog); early endosome membrane (ortholog) NW_004955481 1450127 1462564 - 102016808 AGCD01056832;AGCD01056833;GBCE01008518;XM_005402608;XM_013503510;XM_013503511 XP_005402665;XP_013358964;XP_013358965 MODEL 8860903 protein-coding Rpl31 ribosomal protein L31 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); clear cell renal cell carcinoma (ortholog); Diamond-Blackfan anemia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955470 6912109 6916232 + 102017116 AGCD01052782;GBDF01008250;XM_013522757 XP_013378211 MODEL 8977919 pseudo LOC102019946 mitochondrial import inner membrane translocase subunit TIM14 pseudogene NW_004955524 2240891 2241250 + 102019946 AGCD01068804 MODEL 10207234 protein-coding LOC106147495 natural cytotoxicity triggering receptor 1 NW_004955567 1855257 1856265 - 106147495 AGCD01074493;GBDJ01321609;XM_013509317 XP_013364771 MODEL 730469245 snorna SNORA2 Small nucleolar RNA SNORA2/SNORA34 family 8790510 protein-coding Srsf9 serine and arginine rich splicing factor 9 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); response to alkaloid (ortholog); response to toxic substance (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Experimental Autoimmune Encephalomyelitis (ortholog); human immunodeficiency virus infectious disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955455 11175760 11183597 + 102010549 AGCD01045985;AGCD01045986;GBDF01090183;XM_005396505 XP_005396562 MODEL 10200341 pseudo LOC102010988 Ig heavy chain V-I region 5-like NW_004955470 403274 403787 - 102010988 AGCD01052609 MODEL 8817993 ncrna LOC102011396 uncharacterized LOC102011396 NW_004955405 4622780 4660674 - 102011396 AGCD01004650;GBDF01088044;XR_001235203;XR_001235204 MODEL 9051784 pseudo LOC102005667 uncharacterized LOC102005667 NW_004955454 13267651 13286711 + 102005667 AGCD01045432 MODEL 8867141 protein-coding Rasgef1c RasGEF domain family member 1C ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian cancer (ortholog) NW_004955408 482107 515132 + 102008190 AGCD01007922;AGCD01007923;GBBH01010353;XM_013507276 XP_013362730 MODEL 8803226 protein-coding Rtbdn retbindin ENCODES a protein that exhibits riboflavin binding (ortholog); ASSOCIATED WITH Ependymomas (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); interphotoreceptor matrix (ortholog); plasma membrane (ortholog) NW_004955415 31895446 31899927 - 102023350 AGCD01016700;GBDF01121247;XM_005381033 XP_005381090 MODEL 8754620 protein-coding Spint1 serine peptidase inhibitor, Kunitz type 1 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN branching involved in labyrinthine layer morphogenesis (ortholog); cellular response to BMP stimulus (ortholog); embryonic placenta development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); biliary atresia (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955416 7715536 7728759 + 102028531 AGCD01017005;AGCD01017006;AGCD01017007;GBDK01070594;XM_005381266;XM_013512623;XM_013512624;XM_013512625 XP_005381323;XP_013368077;XP_013368078;XP_013368079 MODEL 8758835 protein-coding LOC102008260 PDZ domain-containing protein MAGIX NW_004955543 651286 655627 + 102008260 AGCD01071596;GBCE01116897;XM_005411322;XM_013508147;XM_013508148 XP_005411379;XP_013363601;XP_013363602 MODEL 8778322 pseudo LOC102011831 nuclear receptor-binding factor 2 pseudogene NW_004957988 521 1128 + 102011831 AGCD01081384 MODEL 8710554 protein-coding Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN hippocampus development (ortholog); protein dephosphorylation (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intercellular bridge (ortholog) NW_004955484 4353950 4419891 - 102012539 AGCD01058210;AGCD01058211;AGCD01058212;GBCE01149912;GBDF01195815;XM_013503948 XP_013359402 MODEL 8954285 pseudo LOC102006015 cysteine-rich PDZ-binding protein pseudogene NW_004955469 267316 267629 + 102006015 AGCD01052216;XR_263422 MODEL 730469402 snorna SNORA7 Small nucleolar RNA SNORA7 8949909 pseudo LOC102006363 eukaryotic translation initiation factor 1 pseudogene NW_004955423 9833774 9834101 - 102006363 AGCD01023668 MODEL 8894513 protein-coding Tlk2 tousled like kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); nucleus localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN intermediate filament (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955478 9100863 9229448 - 102007009 AGCD01056054;AGCD01056055;GBDF01084206;GBDK01189111;XM_013503135 XP_013358589 MODEL 8935220 protein-coding Sgsm3 small G protein signaling modulator 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endosomal transport (ortholog); plasma membrane to endosome transport (ortholog); positive regulation of protein catabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Autosomal Recessive Intellectual Developmental Disorder 84 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); gap junction (ortholog) NW_004955413 26094170 26139062 + 102008837 AGCD01014423;AGCD01014424;GBDF01054066;XM_005379314;XM_005379315;XM_005379318;XM_005379319;XM_005379320;XM_005379321;XM_013511485;XM_013511486 XP_005379371;XP_005379372;XP_005379375;XP_005379376;XP_005379377;XP_005379378;XP_013366939;XP_013366940 MODEL 8732965 protein-coding Pkmyt1 protein kinase, membrane associated tyrosine/threonine 1 ENCODES a protein that exhibits kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN negative regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955442 14368110 14372365 + 102009552 AGCD01037815;GBDF01004416;GBDJ01355796;XM_013517861 XP_013373315 MODEL 8952810 protein-coding Ppp1r9a protein phosphatase 1 regulatory subunit 9A ENCODES a protein that exhibits actin filament binding (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to toxic substance (ortholog); excitatory postsynaptic potential (ortholog); negative regulation of long-term synaptic potentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoskeleton (ortholog); dendrite (ortholog) NW_004955432 11607269 11891568 + 102015138 AGCD01030954;AGCD01030955;AGCD01030956;AGCD01030957;GBCQ01126778;XM_005388052;XM_005388053;XM_005388054;XM_005388055;XM_005388056;XM_005388057;XM_005388058;XM_005388059;XM_013516008;XM_013516009 XP_005388109;XP_005388110;XP_005388111;XP_005388112;XP_005388113;XP_005388114;XP_005388115;XP_005388116;XP_013371462;XP_013371463 MODEL 730469385 snorna SNORD91 Small nucleolar RNA SNORD91 family 15036855 trna Trnat-ggu transfer RNA threonine (anticodon GGU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978811 8821472 protein-coding Rhoh ras homolog family member H ENCODES a protein that exhibits GTP binding (ortholog); kinase inhibitor activity (ortholog); INVOLVED IN mast cell activation (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of T cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); coronin-1A deficiency (ortholog); FOUND IN cytoplasm (ortholog); immunological synapse (ortholog); plasma membrane (ortholog) NW_004955443 7227751 7269984 - 102019443 AGCD01038274;AGCD01038275;GBBH01183545;XM_005391959;XM_005391960;XM_005391961;XM_005391962;XM_013518115;XM_013518116 XP_005392016;XP_005392017;XP_005392018;XP_005392019;XP_013373569;XP_013373570 MODEL 8785016 protein-coding Reck reversion inducing cysteine rich protein with kazal motifs ENCODES a protein that exhibits coreceptor activity (ortholog); endopeptidase inhibitor activity (ortholog); metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN blood vessel maturation (ortholog); canonical Wnt signaling pathway (ortholog); embryo implantation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog); plasma membrane raft (ortholog); Wnt signalosome (ortholog) NW_004955472 222261 276869 - 102008717 AGCD01053322;AGCD01053323;GBCE01055236;GBDJ01311384;XM_013523013 XP_013378467 MODEL 8798305 protein-coding Prnd prion like protein doppel ENCODES a protein that exhibits copper ion binding (ortholog); INVOLVED IN acrosome reaction (ortholog); intracellular copper ion homeostasis (ortholog); single fertilization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955415 15469500 15474817 + 102008218 AGCD01016345;GBDF01009044;XM_005380819 XP_005380876 MODEL 8731399 protein-coding Plppr1 phospholipid phosphatase related 1 ENCODES a protein that exhibits lysophosphatidic acid phosphatase activity (ortholog); INVOLVED IN nervous system development (ortholog); phospholipid dephosphorylation (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); stomach cancer (ortholog); FOUND IN neuron projection (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955419 24544868 24809419 - 102010266 AGCD01020350;AGCD01020351;AGCD01020352;AGCD01020353;AGCD01020354;AGCD01020355;AGCD01020356;GBCE01026760;XM_005382804;XM_005382805;XM_013513312 XP_005382861;XP_005382862;XP_013368766 MODEL 9009390 protein-coding Polr3d RNA polymerase III subunit D ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); termination of RNA polymerase III transcription (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase III complex (ortholog) NW_004955403 45721266 45727214 + 102005657 AGCD01002826;GBDK01187148;XM_005373655 XP_005373712 MODEL 8820626 protein-coding Ptprq protein tyrosine phosphatase receptor type Q INVOLVED IN detection of mechanical stimulus involved in sensory perception of sound (ortholog); hematopoietic progenitor cell differentiation (ortholog); inner ear morphogenesis (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 73 (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 84A (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); stereocilium base (ortholog) NW_004955405 19123905 19318619 + 102021834 AGCD01005031;AGCD01005032;AGCD01005033;AGCD01005034;AGCD01005035;GBCE01116834;XM_005374365;XM_013517925 XP_005374422;XP_013373379 MODEL 8742067 ncrna LOC102007499 uncharacterized LOC102007499 NW_004955404 47564519 47595536 - 102007499 AGCD01004483;GBDF01290414;XR_001235118;XR_259342 MODEL 9009426 protein-coding Ereg epiregulin ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN cell-cell signaling (ortholog); cytokine-mediated signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholesteatoma (ortholog); erythropoietic protoporphyria (ortholog); FOUND IN extracellular region (ortholog) NW_004955474 612440 627606 + 102006571 AGCD01054224;GBCC01052167;XM_005401312 XP_005401369 MODEL 9011773 protein-coding Rnf150 ring finger protein 150 ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955471 2026779 2255816 + 102013075 AGCD01052997;AGCD01052998;AGCD01052999;AGCD01053000;AGCD01053001;AGCD01053002;AGCD01053003;AGCD01053004;GBBH01073042;XM_005400865 XP_005400922 MODEL 8953690 protein-coding LOC102012212 putative DBH-like monooxygenase protein 2 NW_004955494 1292620 1301008 + 102012212 AGCD01061393;GBDF01104482;XM_005405397 XP_005405454 MODEL 8766279 pseudo LOC102008641 zinc finger protein OZF-like NW_004955425 1882091 1882998 - 102008641 AGCD01025249 MODEL 9009844 pseudo LOC102016450 60S ribosomal protein L32 pseudogene NW_004955457 8712306 8712791 - 102016450 AGCD01046916 MODEL 8803570 pseudo LOC102010227 coenzyme Q-binding protein COQ10 homolog B, mitochondrial pseudogene NW_004955406 14637868 14638870 + 102010227 AGCD01005967 MODEL 39133371 snrna U4 U4 spliceosomal RNA 8905193 pseudo LOC102018416 uncharacterized LOC102018416 NW_004955427 9744289 9780161 - 102018416 AGCD01027104;XR_261251 MODEL 9043676 pseudo LOC102004965 desumoylating isopeptidase 2-like NW_004955521 50420 60020 - 102004965 AGCD01068127;AGCD01068128 MODEL 9055088 protein-coding Rpl32 ribosomal protein L32 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cytoplasmic translation (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955429 17886048 17890536 + 102014697 AGCD01028869;GBCQ01010569;XM_005387092 XP_005387149 MODEL 8943864 protein-coding Wdr82 WD repeat domain 82 ENCODES a protein that exhibits chromatin binding (ortholog); lncRNA binding (ortholog); INVOLVED IN gene expression (ortholog); lncRNA catabolic process (ortholog); negative regulation of DNA-templated transcription, elongation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955532 3860785 3880714 - 102027900 AGCD01070302;GBDK01090445;XM_005410348 XP_005410405 MODEL 730469261 snorna SNORA2 Small nucleolar RNA SNORA2/SNORA34 family 8773963 protein-coding LOC102010989 putative olfactory receptor 52P1 NW_004955414 21657267 21659390 + 102010989 AGCD01015425;GBDJ01377827;XM_005380103 XP_005380160 MODEL 730469276 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 39131965 snorna SNORD116 Small nucleolar RNA SNORD116 8719892 protein-coding Tll1 tolloid like 1 ENCODES a protein that exhibits collagen binding (ortholog); ASSOCIATED WITH atrial heart septal defect 6 (ortholog); cervical cancer (ortholog); congenital heart disease (ortholog) NW_004955403 39299461 39491638 - 102011072 AGCD01002627;AGCD01002628;AGCD01002629;AGCD01002630;GBCE01123233;GBCQ01016540;XM_005373585 XP_005373642 MODEL 39133398 snrna U2 U2 spliceosomal RNA 10267286 pseudo LOC106147496 serine/threonine-protein kinase 3 pseudogene NW_004955408 24746083 24747709 + 106147496 AGCD01008625 MODEL 8988706 protein-coding Trex1 three prime repair exonuclease 1 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); adenyl deoxyribonucleotide binding (ortholog); INVOLVED IN activation of immune response (ortholog); adaptive immune response (ortholog); apoptotic cell clearance (ortholog); PARTICIPATES IN DNA replication pathway; G2/M DNA damage checkpoint pathway; ASSOCIATED WITH Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 1 (ortholog); brain disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955532 533877 535767 + 102025941 AGCD01070130;GBBH01050782;XM_005410151 XP_005410208 MODEL 8750916 protein-coding Sost sclerostin ENCODES a protein that exhibits carbohydrate binding (ortholog); DNA-binding transcription factor binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN cellular response to parathyroid hormone stimulus (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH autosomal dominant craniodiaphyseal dysplasia (ortholog); genetic disease (ortholog); osteochondrodysplasia (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog); protein-containing complex (ortholog) NW_004955451 17054939 17058027 - 102004446 AGCD01043715;AGCD01043716;GBCE01062769;XM_005394641 XP_005394698 MODEL 8772274 pseudo LOC102011398 ubiquitin-conjugating enzyme E2 D2 pseudogene NW_004955406 14133361 14133789 - 102011398 AGCD01005958 MODEL 39131456 protein-coding RASGEF1C RasGEF domain family member 1C 8909756 protein-coding Sema7a semaphorin 7A (JohnMiltonHagen blood group) ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN axon extension (ortholog); integrin-mediated signaling pathway (ortholog); neuron projection development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); GABA-ergic synapse (ortholog); presynapse (ortholog) NW_004955450 3401732 3424547 + 102014629 AGCD01042432;AGCD01042433;AGCD01042434;GBBH01193875;GBDK01084141;XM_005393558;XM_013519016 XP_005393615;XP_013374470 MODEL 8791391 protein-coding Spint2 serine peptidase inhibitor, Kunitz type 2 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN basement membrane organization (ortholog); cellular response to BMP stimulus (ortholog); epithelial cell morphogenesis involved in placental branching (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); biliary atresia (ortholog); carcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955468 1142718 1181210 - 102020551 AGCD01051757;AGCD01051758;AGCD01051759;AGCD01051760;GBBH01003770;XM_005399867;XM_005399868;XM_013522432 XP_005399924;XP_005399925;XP_013377886 MODEL 8763784 protein-coding Lrat lecithin retinol acyltransferase ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); O-palmitoyltransferase activity (ortholog); phosphatidylcholine-retinol O-acyltransferase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); lipid storage (ortholog); positive regulation of lipid transport (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoic acid metabolic pathway; ASSOCIATED WITH celiac disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); multivesicular body (ortholog) NW_004955471 2603395 2610988 + 102015310 AGCD01053024;GBCQ01142329;GBDJ01353884;XM_005400870 XP_005400927 MODEL 8821763 pseudo LOC102004232 40S ribosomal protein S3 pseudogene NW_004955451 1507223 1508030 - 102004232 AGCD01042972 MODEL 8995791 protein-coding LOC102013405 cytochrome P450 2D17-like NW_004955413 27621018 27639195 - 102013405 AGCD01014521;AGCD01014522;AGCD01014523;AGCD01014524;AGCD01014525;AGCD01014526;GBBH01145942;XM_013511462 XP_013366916 MODEL 8734543 protein-coding Psmb4 proteasome 20S subunit beta 4 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); structural constituent of proteasome (ortholog); INVOLVED IN negative regulation of inflammatory response to antigenic stimulus (ortholog); proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955589 976216 978566 - 102022554 AGCD01076185;GBDF01001317;XM_005414579 XP_005414636 MODEL 9019225 ncrna LOC102003199 uncharacterized LOC102003199 NW_004955405 11281717 11443213 - 102003199 AGCD01004830;AGCD01004831;AGCD01004832;AGCD01004833;GBDJ01324103;XR_001235325;XR_001235327;XR_001235329 MODEL 8719081 protein-coding C3 complement C3 ENCODES a protein that exhibits antigen binding (ortholog); C5L2 anaphylatoxin chemotactic receptor binding (ortholog); chemokine activity (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); B cell activation (ortholog); complement activation (ortholog); PARTICIPATES IN classical complement pathway; ASSOCIATED WITH otitis media; acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cell surface (ortholog); classical-complement-pathway C3/C5 convertase complex (ortholog); cytoplasmic side of Golgi membrane (ortholog) NW_004955495 2796601 2824233 + 102006475 AGCD01061799;AGCD01061800;AGCD01061801;AGCD01061802;GBDJ01009718;XM_005405700 XP_005405757 MODEL 8995980 pseudo LOC102019601 N-alpha-acetyltransferase 50 pseudogene NW_004955419 564842 565381 + 102019601 AGCD01019595 MODEL 8706603 protein-coding Pkn1 protein kinase N1 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN B cell apoptotic process (ortholog); B cell homeostasis (ortholog); epithelial cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955415 33040868 33062753 + 102014448 AGCD01016747;AGCD01016748;GBDK01001917;XM_005381094;XM_005381095;XM_005381096;XM_005381097;XM_005381098;XM_013512169 XP_005381151;XP_005381152;XP_005381153;XP_005381154;XP_005381155;XP_013367623 MODEL 9007987 protein-coding LOC102019949 vomeronasal type-2 receptor 116-like NW_004955524 3644005 3713103 + 102019949 AGCD01068918;AGCD01068919;AGCD01068920;AGCD01068921;AGCD01068922;AGCD01068923;AGCD01068924;XM_013507198 XP_013362652 MODEL 9002121 trna Trnat-ugu transfer RNA threonine (anticodon UGU) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955530;NW_004955550;NW_004955431;NW_004955550;NW_004955550 130485;1411138;19443004;1499781;1425424 130557;1411210;19443075;1499853;1425496 +;-;+;+;- 101978812 AGCD01030449;AGCD01069830;AGCD01072566;AGCD01072577 MODEL 8791839 protein-coding LOC102011839 keratin-associated protein 7-1 NW_004955407 30545079 30553536 - 102011839 AGCD01007636;GBDF01259648;XM_005375655 XP_005375712 MODEL 8906627 pseudo LOC102022495 leucine-rich repeat-containing protein 58 pseudogene NW_004955475 2731063 2732539 - 102022495 AGCD01054818 MODEL 8830301 protein-coding Slc39a12 solute carrier family 39 member 12 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN positive regulation of sprouting angiogenesis (ortholog); regulation of microtubule polymerization (ortholog); regulation of neuron projection development (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN membrane (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955429 10053022 10116713 - 102026241 AGCD01028665;AGCD01028666;XM_005386957;XM_013515346;XM_013515347;XM_013515348;XM_013515349 XP_005387014;XP_013370800;XP_013370801;XP_013370802;XP_013370803 MODEL 8882660 protein-coding Rtca RNA 3'-terminal phosphate cyclase ENCODES a protein that exhibits RNA-3'-phosphate cyclase activity (ortholog); INVOLVED IN negative regulation of optical nerve axon regeneration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955435 5019654 5041611 + 102005077 AGCD01032871;AGCD01032872;AGCD01032873;GBBH01092988;XM_005388796 XP_005388853 MODEL 8940370 protein-coding Tll2 tolloid like 2 INVOLVED IN negative regulation of skeletal muscle tissue growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955507 2591619 2718161 - 102017483 AGCD01065591;AGCD01065592;GBBH01045943;XM_005407577 XP_005407634 MODEL 9065594 ncrna LOC102007503 uncharacterized LOC102007503 NW_004955453 6872218 6875092 - 102007503 AGCD01044732;GBDF01261600;XR_001236134 MODEL 9039029 protein-coding LOC102012215 aldose reductase-related protein 2-like NW_004955494 7960872 8029450 - 102012215 AGCD01061559;AGCD01061560;AGCD01061561;AGCD01061562;AGCD01061563;AGCD01061564;AGCD01061565;AGCD01061566;AGCD01061567;AGCD01061568;AGCD01061569;GBBH01186150;XM_013505016 XP_013360470 MODEL 8777773 pseudo LOC102016456 phosphoglycerate kinase 1-like NW_004955410 16272427 16273969 - 102016456 AGCD01010954;XR_259840 MODEL 8736405 protein-coding LOC102006019 olfactory receptor 51I2-like NW_004955414 21379795 21380742 - 102006019 AGCD01015417;XM_005380088 XP_005380145 MODEL 8906784 protein-coding Srxn1 sulfiredoxin 1 ENCODES a protein that exhibits oxidoreductase activity, acting on a sulfur group of donors (ortholog); sulfiredoxin activity (ortholog); INVOLVED IN response to oxidative stress (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); thymoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955597 483358 487555 - 102026821 AGCD01076557;GBCQ01038168;GBDI01255809;XM_013510033 XP_013365487 MODEL 39133372 snrna U4 U4 spliceosomal RNA 8983166 protein-coding Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha ENCODES a protein that exhibits BAT3 complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of ERAD pathway (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) NW_004955495 5025038 5051810 - 102018300 AGCD01061970;AGCD01061971;AGCD01061972;GBCE01081756;XM_005405830;XM_005405831;XM_005405832;XM_013505255;XM_013505256;XM_013505257 XP_005405887;XP_005405888;XP_005405889;XP_013360709;XP_013360710;XP_013360711 MODEL 616940629 snorna SNORD93 Small nucleolar RNA SNORD93 8864798 protein-coding LOC102009030 olfactory receptor 8B12-like NW_004955412 25540272 25542114 - 102009030 AGCD01013160;GBDI01315433;XM_005378423 XP_005378480 MODEL 8982276 ncrna LOC102005668 uncharacterized LOC102005668 NW_004955408 4130103 4136421 + 102005668 AGCD01008089;GBDF01241145;XR_259658 MODEL 8741495 protein-coding Rhoj ras homolog family member J ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); regulation of cell shape (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); clear cell renal cell carcinoma (ortholog); Colonic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) NW_004955466 6476822 6564890 - 102010140 AGCD01050928;GBBH01186921;XM_005399158 XP_005399215 MODEL 8862512 protein-coding Wdr83 WD repeat domain 83 INVOLVED IN inflammatory response to wounding (ortholog); mRNA splicing, via spliceosome (ortholog); neural tube closure (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); lysosome (ortholog) NW_004955415 31774017 31778737 + 102018387 AGCD01016697;GBDF01114913;XM_005381017 XP_005381074 MODEL 39131964 snorna SNORD116 Small nucleolar RNA SNORD116 8818216 protein-coding Plppr2 phospholipid phosphatase related 2 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog) NW_004955495 2270323 2279688 + 102021683 AGCD01061760;GBBH01044136;XM_005405660;XM_005405661 XP_005405717;XP_005405718 MODEL 8890226 protein-coding Trex2 three prime repair exonuclease 2 ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); DNA binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN DNA metabolic process (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); intellectual disability (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955580 207903 209426 - 102010534 AGCD01075591;GBDF01123808;XM_005414119 XP_005414176 MODEL 8796332 protein-coding Trnau1ap tRNA selenocysteine 1 associated protein 1 ENCODES a protein that exhibits tRNA binding (ortholog); INVOLVED IN selenocysteine incorporation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955452 7645715 7663165 + 102017838 AGCD01044179;AGCD01044180;GBDF01189732;XM_005394958 XP_005395015 MODEL 8782775 protein-coding LOC102008265 keratin, type II cuticular Hb6 NW_004955547 2650341 2656801 + 102008265 AGCD01072290;AGCD01072291;GBDF01140560;XM_005411939 XP_005411996 MODEL 8993438 pseudo LOC102008645 glycolipid transfer protein pseudogene NW_004955501 6968136 6973149 + 102008645 AGCD01064202;XM_005406840 MODEL 8776952 pseudo LOC102006370 non-histone chromosomal protein HMG-17 pseudogene NW_004955427 21180390 21189979 - 102006370 AGCD01027432;AGCD01027433;XR_261284 MODEL 8930811 protein-coding Pkn2 protein kinase N2 ENCODES a protein that exhibits histone deacetylase binding (ortholog); kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN apical junction assembly (ortholog); epithelial cell migration (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN anchoring junction (ortholog); apical junction complex (ortholog); cleavage furrow (ortholog) NW_004955423 5467017 5575435 - 102024815 AGCD01023561;AGCD01023562;AGCD01023563;GBDI01221436;XM_013514513 XP_013369967 MODEL 8838681 protein-coding Erf ETS2 repressor factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN chorio-allantoic fusion (ortholog); ectodermal cell differentiation (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Anorectal Malformations (ortholog); Arnold-Chiari Malformation (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955555 654945 661097 + 102027684 AGCD01073042;GBBH01090836;GBCE01095401;XM_005412381;XM_005412382;XM_013508752 XP_005412438;XP_005412439;XP_013364206 MODEL 8879513 protein-coding LOC102010229 keratin-associated protein 20-2-like NW_004955407 30229986 30230156 + 102010229 AGCD01007628;XM_005375650 XP_005375707 MODEL 8719443 pseudo LOC102018418 putative ATP-dependent RNA helicase Pl10 NW_004955427 10783970 10784631 + 102018418 AGCD01027157 MODEL 9052062 protein-coding Rasgrf1 Ras protein specific guanine nucleotide releasing factor 1 ENCODES a protein that exhibits glutamate receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); cell population proliferation (ortholog); cellular response to antibiotic (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); Drug-Induced Dyskinesia (ortholog); FOUND IN apical dendrite (ortholog); apicolateral plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955533 69736 167626 - 102012360 AGCD01070312;GBDK01432528;XM_005410378;XM_013507688;XM_013507689;XM_013507690 XP_005410435;XP_013363142;XP_013363143;XP_013363144 MODEL 8890650 protein-coding Ppp1r9b protein phosphatase 1 regulatory subunit 9B ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); D2 dopamine receptor binding (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament organization (ortholog); calcium-mediated signaling (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Cognitive Dysfunction (ortholog); Colorectal Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); cortical actin cytoskeleton (ortholog); cytoplasm (ortholog) NW_004955451 11516548 11530263 + 102015685 AGCD01043357;GBDF01098962;XM_005394179 XP_005394236 MODEL 730469312 snorna SNORA2 Small nucleolar RNA SNORA2/SNORA34 family 730469028 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 8913573 protein-coding Recql RecQ like helicase ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); DNA helicase activity (ortholog); INVOLVED IN replication fork processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 17115443 17148708 - 102017214 AGCD01014129;AGCD01014130;GBCQ01179121;XM_005379058;XM_013511493 XP_005379115;XP_013366947 MODEL 9051825 protein-coding Prnp prion protein (Kanno blood group) ENCODES a protein that exhibits amyloid-beta binding (ortholog); aspartic-type endopeptidase inhibitor activity (ortholog); ATP-dependent protein binding (ortholog); INVOLVED IN amyloid precursor protein metabolic process (ortholog); cellular response to amyloid-beta (ortholog); cellular response to copper ion (ortholog); PARTICIPATES IN glypican signaling pathway; iron uptake pathway; Notch signaling pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) NW_004955415 15442313 15454644 + 102007546 AGCD01016345;GBDJ01175870;XM_005380818 XP_005380875 MODEL 8813534 protein-coding Polr3e RNA polymerase III subunit E INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase III (ortholog); transcription initiation at RNA polymerase III promoter (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase III complex (ortholog) NW_004955493 933381 962314 + 102012547 AGCD01060873;GBDF01119676;XM_005405071;XM_005405076;XM_005405077;XM_013504853 XP_005405128;XP_005405133;XP_005405134;XP_013360307 MODEL 39133400 snrna U2 U2 spliceosomal RNA 8854175 protein-coding Ptprr protein tyrosine phosphatase receptor type R ENCODES a protein that exhibits protein kinase binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN ERBB2 signaling pathway (ortholog); in utero embryonic development (ortholog); negative regulation of epithelial cell migration (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955405 10767548 11133695 - 102029696 AGCD01004822;AGCD01004823;AGCD01004824;AGCD01004825;AGCD01004826;AGCD01004827;GBDJ01213984;XM_005374316;XM_005374317 XP_005374373;XP_005374374 MODEL 8801302 protein-coding Rnf151 ring finger protein 151 ASSOCIATED WITH sarcoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955442 15300228 15303645 - 102013763 AGCD01037864;GBDF01007492;XM_005391495;XM_005391496 XP_005391552;XP_005391553 MODEL 730469455 snorna SNORA7 Small nucleolar RNA SNORA7 8741404 protein-coding LOC102004966 ubiquitin-conjugating enzyme E2 variant 2 NW_004955434 3903987 3905023 - 102004966 AGCD01032148;XM_005388563 XP_005388620 MODEL 10237270 pseudo LOC106147497 RNA-binding motif, single-stranded-interacting protein 1 pseudogene NW_004955568 1191751 1194361 + 106147497 AGCD01074543 MODEL 8754672 trna Trnav-aac transfer RNA valine (anticodon AAC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978798 AGCD01020530;AGCD01050590;AGCD01050597;AGCD01050600;AGCD01057602;AGCD01069830;AGCD01071614 MODEL 39131431 protein-coding SPINT4 serine peptidase inhibitor, Kunitz type 4 9033097 ncrna LOC102012219 uncharacterized LOC102012219 NW_004955495 5440402 5443188 - 102012219 AGCD01062007;GBDF01145786;XR_001231364 MODEL 8746306 protein-coding LOC102013406 olfactory receptor 6-like NW_004955414 22692862 22693770 - 102013406 AGCD01015471;GBBH01130436;XM_005380511 XP_005380568 MODEL 8784774 protein-coding Rpl34 ribosomal protein L34 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955496 1374959 1378971 - 102028986 AGCD01062252;AY533224;GBDK01006354;XM_005406197 AAS59426;XP_005406254 MODEL 8728223 protein-coding LOC102008649 olfactory receptor 5M11-like NW_004955511 1679591 1680559 - 102008649 AGCD01066377;XM_005407971 XP_005408028 MODEL 8888047 ncrna LOC102010990 uncharacterized LOC102010990 NW_004955471 9880793 9917131 + 102010990 AGCD01053222;GBDF01194926;XR_263532 MODEL 8757948 protein-coding C3ar1 complement C3a receptor 1 ENCODES a protein that exhibits complement component C3a binding (ortholog); complement component C3a receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); complement receptor mediated signaling pathway (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); asthma (ortholog); atypical hemolytic-uremic syndrome (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 6707003 6715689 - 102028398 AGCD01013772;GBBH01222006;XM_005378913;XM_005378914;XM_005378915;XM_013511497;XM_013511498 XP_005378970;XP_005378971;XP_005378972;XP_013366951;XP_013366952 MODEL 39133373 snrna U4 U4 spliceosomal RNA 8868994 pseudo LOC102019950 peptidyl-prolyl cis-trans isomerase H pseudogene NW_004955435 1668113 1668740 - 102019950 AGCD01032749 MODEL 8807755 protein-coding Sostdc1 sclerostin domain containing 1 ENCODES a protein that exhibits BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN hair follicle morphogenesis (ortholog); mammary gland bud morphogenesis (ortholog); negative regulation of BMP signaling pathway (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog) NW_004955410 19657805 19662121 - 102022057 AGCD01011027;GBDI01025966;XM_005377334 XP_005377391 MODEL 8964443 protein-coding Phospho1 phosphoethanolamine/phosphocholine phosphatase 1 ENCODES a protein that exhibits phosphatidylcholine phospholipase C activity (ortholog); phosphocholine phosphatase activity (ortholog); phosphoethanolamine phosphatase activity (ortholog); INVOLVED IN bone mineralization (ortholog); bone mineralization involved in bone maturation (ortholog); endochondral ossification (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH lung squamous cell carcinoma (ortholog); Metabolic Bone Diseases (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular matrix (ortholog); extracellular membrane-bounded organelle (ortholog); extracellular vesicle (ortholog) NW_004955451 12232465 12240864 + 102026280 AGCD01043379;GBDK01415172;XM_005394214;XM_005394215;XM_005394216;XM_005394217;XM_005394218;XM_013519112 XP_005394271;XP_005394272;XP_005394273;XP_005394274;XP_005394275;XP_013374566 MODEL 8726721 ncrna LOC102011840 uncharacterized LOC102011840 NW_004955407 35818286 35827944 - 102011840 AGCD01007751;GBCQ01178585;XR_001231235;XR_001231237;XR_001231238;XR_259614 MODEL 8904754 pseudo LOC102022501 olfactory receptor 1361-like NW_004955419 5358140 5359599 - 102022501 AGCD01019802 MODEL 8804785 ncrna LOC102004236 uncharacterized LOC102004236 NW_004955406 7288327 7301552 - 102004236 AGCD01005768;XR_259482 MODEL 8868311 protein-coding Senp1 SUMO specific peptidase 1 ENCODES a protein that exhibits deSUMOylase activity (ortholog); SUMO-specific endopeptidase activity (ortholog); INVOLVED IN negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein desumoylation (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) NW_004955500 6924445 6978482 - 102025139 AGCD01063895;GBCE01013150;GBDF01049796;XM_005406636 XP_005406693 MODEL 616940622 protein-coding TRGC1 T cell receptor gamma constant 1 9060848 pseudo LOC102016457 alpha-enolase pseudogene NW_004955410 9065318 9066649 - 102016457 AGCD01010758 MODEL 8938040 ncrna LOC102006020 uncharacterized LOC102006020 NW_004955414 22872844 22875573 - 102006020 AGCD01015483;GBCQ01017796;XR_260188 MODEL 8825508 protein-coding Tln1 talin 1 ENCODES a protein that exhibits integrin binding (ortholog); LIM domain binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN cell-substrate junction assembly (ortholog); cortical actin cytoskeleton organization (ortholog); cortical microtubule organization (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN adherens junction (ortholog); centriolar satellite (ortholog); cytosol (ortholog) NW_004955472 568939 603676 + 102007109 AGCD01053341;GBCB01022575;XM_005401002;XM_005401004;XM_013522935 XP_005401059;XP_005401061;XP_013378389 MODEL 9041553 ncrna LOC102003205 uncharacterized LOC102003205 NW_004955454 12305249 12309122 - 102003205 AGCD01045408;XR_262790 MODEL 9039327 protein-coding Psmb5 proteasome 20S subunit beta 5 ENCODES a protein that exhibits peptidase activity (ortholog); threonine-type endopeptidase activity (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH melanoma (ortholog); Myocardial Ischemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955409 37269319 37278957 + 102025768 AGCD01010503;AGCD01010504;GBCE01000116;XM_005377095 XP_005377152 MODEL 8818191 protein-coding LOC102019604 7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase ENCODES a protein that exhibits sterol 12-alpha-hydroxylase activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); positive regulation of intestinal cholesterol absorption (ortholog); response to cholesterol (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); extrahepatic cholestasis (ortholog) NW_004955420 27988067 27990637 + 102019604 AGCD01021466;GBCQ01087698;XM_005383508 XP_005383565 MODEL 8722856 protein-coding LOC102018423 vomeronasal type-1 receptor 90-like NW_004955429 12408891 12409616 + 102018423 AGCD01028715;XM_005387249 XP_005387306 MODEL 8771755 protein-coding Spire1 spire type actin nucleation factor 1 INVOLVED IN actin cytoskeleton organization (ortholog); behavioral fear response (ortholog); cleavage furrow formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell cortex (ortholog); cleavage furrow (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955402 920730 1011339 + 102010213 AGCD01000038;AGCD01000039;AGCD01000040;AGCD01000041;AGCD01000042;GBCB01058656;XM_005372557;XM_005372558;XM_005372559;XM_005372560 XP_005372614;XP_005372615;XP_005372616;XP_005372617 MODEL 8701060 pseudo LOC102011405 chromodomain Y-like protein pseudogene NW_004955407 28152182 28153855 - 102011405 AGCD01007576 MODEL 8830541 ncrna LOC102005676 uncharacterized LOC102005676 NW_004955460 10833953 10838057 + 102005676 AGCD01048618;AGCD01048619;GBDI01033534;XR_263054 MODEL 730469337 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 39133402 snrna U2 U2 spliceosomal RNA 8943699 protein-coding Rhoq ras homolog family member Q ENCODES a protein that exhibits GBD domain binding (ortholog); GTPase activity (ortholog); profilin binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cortical actin cytoskeleton organization (ortholog); GTP metabolic process (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin filament (ortholog); membrane raft (ortholog); plasma membrane (ortholog) NW_004955441 13457757 13495221 + 102013343 AGCD01037151;GBBH01164132;GBDK01318868;XM_005390979;XM_013517588 XP_005391036;XP_013373042 MODEL 8723562 protein-coding Wdr83os WD repeat domain 83 opposite strand ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN multi-pass transmembrane protein insertion into ER membrane (ortholog); protein insertion into ER membrane (ortholog); ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH VARIABLE FAMILIAL HYPERCHOLANEMIA (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); multi-pass translocon complex (ortholog); protein folding chaperone complex (ortholog) NW_004955415 31772401 31773916 - 102018721 AGCD01016697;GBCQ01011781;XM_005381018 XP_005381075 MODEL 8982321 ncrna LOC102008271 uncharacterized LOC102008271 NW_004955445 2704964 2707871 - 102008271 AGCD01039363;GBCE01111187;XR_262299 MODEL 8752326 protein-coding Lratd1 LRAT domain containing 1 INVOLVED IN cell morphogenesis (ortholog); cell motility (ortholog); ASSOCIATED WITH cervical cancer (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog) NW_004955487 8452413 8454585 + 102010168 AGCD01059434;GBDF01089408;XM_005404438;XM_005404439 XP_005404495;XP_005404496 MODEL 8995426 protein-coding Rtcb RNA 2',3'-cyclic phosphate and 5'-OH ligase ENCODES a protein that exhibits protein guanylyltransferase activity (ortholog); RNA ligase (GTP) activity (ortholog); vinculin binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); IRE1-mediated unfolded protein response (ortholog); mRNA splicing, via endonucleolytic cleavage and ligation (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955405 41360370 41375215 - 102029147 AGCD01005548;AGCD01005549;GBCC01046704;XM_013519150 XP_013374604 MODEL 9043330 protein-coding Plppr3 phospholipid phosphatase related 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); sarcoma (ortholog) NW_004955495 6980213 6990331 + 102020352 AGCD01062108;AGCD01062109;GBDI01386422;XM_013505337 XP_013360791 MODEL 8912587 protein-coding LOC102006372 olfactory receptor 13G1-like NW_004955507 6393509 6394453 + 102006372 AGCD01065713;XM_005407722 XP_005407779 MODEL 8924430 protein-coding LOC102004967 vomeronasal type-2 receptor 116-like NW_004955524 2220139 2229192 + 102004967 AGCD01068802;XM_013507194 XP_013362648 MODEL 8917558 protein-coding Erfe erythroferrone ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of autophagy (ortholog); FOUND IN extracellular region (ortholog) NW_004955542 2408504 2415522 - 102016097 AGCD01071522;GBDF01279710;XM_013508015;XM_013508016 XP_013363469;XP_013363470 MODEL 8990206 protein-coding Rnf152 ring finger protein 152 ENCODES a protein that exhibits small GTPase binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); negative regulation of TORC1 signaling (ortholog); positive regulation of autophagy (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN lysosomal membrane (ortholog); lysosome (ortholog) NW_004955402 45774565 45846649 - 102018547 AGCD01001142;GBCQ01153583;XM_005373011;XM_005373012;XM_005373013;XM_005373014;XM_013511141 XP_005373068;XP_005373069;XP_005373070;XP_005373071;XP_013366595 MODEL 8968174 protein-coding LOC102010231 uncharacterized LOC102010231 NW_004955408 30891040 30894592 + 102010231 AGCD01008817;GBDF01045340;XM_005376478;XR_259728 XP_005376535 MODEL 39132060 snorna SNORD94 Small nucleolar RNA SNORD94 730469446 snorna SNORA2 Small nucleolar RNA SNORA2/SNORA34 family 8782177 protein-coding Ppp2ca protein phosphatase 2 catalytic subunit alpha ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); enzyme binding (ortholog); GABA receptor binding (ortholog); INVOLVED IN cardiac ventricle development (ortholog); cellular response to calcium ion (ortholog); cellular response to cytokine stimulus (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ataxia telangiectasia-mutated (ATM) signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, centromeric region (ortholog) NW_004955408 5435117 5460361 - 102012929 AGCD01008137;AGCD01008138;GBCQ01004946;XM_005376137 XP_005376194 MODEL 8791764 ncrna LOC102009031 uncharacterized LOC102009031 NW_004955413 3100551 3144356 - 102009031 AGCD01013567;AGCD01013568;GBBH01229827;XR_001233023;XR_001233024;XR_001233025;XR_001233026;XR_001233027 MODEL 8941572 protein-coding LOC102010999 uncharacterized LOC102010999 NW_004955415 28977064 28978164 + 102010999 AGCD01016646;XM_005381137 XP_005381194 MODEL 8723601 protein-coding Rpl35 ribosomal protein L35 ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to UV-B (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Diamond-Blackfan anemia 19 (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955419 3371109 3374555 + 102021014 AGCD01019719;GBDF01006252;XM_005382482 XP_005382539 MODEL 8806108 protein-coding Prob1 proline rich basic protein 1 ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955418 1163993 1169968 + 102023699 AGCD01018711;AGCD01018712;GBCQ01097583;GBDJ01097373;XM_005382339 XP_005382396 MODEL 39131963 snorna SNORD116 Small nucleolar RNA SNORD116 9057404 pseudo LOC102019952 UMP-CMP kinase pseudogene NW_004955529 1375292 1375976 - 102019952 AGCD01069683 MODEL 9067021 protein-coding Polr3f RNA polymerase III subunit F ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); termination of RNA polymerase III transcription (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog); RNA polymerase III complex (ortholog) NW_004955415 27022081 27036475 + 102016803 AGCD01016621;AGCD01016622;GBDF01221498;XM_013512230;XM_013512231 XP_013367684;XP_013367685 MODEL 39132537 snorna SNORA70 Small nucleolar RNA SNORA70 8785268 protein-coding Slc39a13 solute carrier family 39 member 13 ENCODES a protein that exhibits protein homodimerization activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cell migration (ortholog); cellular response to stress (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955422 845076 852772 - 102022302 AGCD01022437;AGCD01022438;AGCD01022439;GBBH01093129;GBDF01081895;XM_005383973 XP_005384030 MODEL 10353899 ncrna LOC106147498 uncharacterized LOC106147498 NW_004955568 121850 122561 + 106147498 AGCD01074503;GBCE01011332;XR_001232424 MODEL 8880586 protein-coding Senp2 SUMO specific peptidase 2 ENCODES a protein that exhibits deSUMOylase activity (ortholog); protein domain specific binding (ortholog); SUMO-specific endopeptidase activity (ortholog); INVOLVED IN dorsal/ventral axis specification (ortholog); fat cell differentiation (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955420 21969537 22005094 - 102010373 AGCD01021176;AGCD01021177;GBBH01117914;GBDF01051391;XM_005383292 XP_005383349 MODEL 8741444 protein-coding Rtel1 regulator of telomere elongation helicase 1 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); DNA helicase activity (ortholog); INVOLVED IN DNA strand displacement (ortholog); mitotic telomere maintenance via semi-conservative replication (ortholog); negative regulation of DNA recombination (ortholog); ASSOCIATED WITH autosomal recessive dyskeratosis congenita 5 (ortholog); childhood astrocytic tumor (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear membrane (ortholog); nuclear speck (ortholog) NW_004955528 531680 578003 - 102007691 AGCD01069537;AGCD01069538;GBDJ01227066;XM_013507437;XM_013507438;XM_013507439;XM_013507440;XM_013507441;XM_013507442;XM_013507443;XM_013507444;XM_013507445;XR_001231981 XP_013362891;XP_013362892;XP_013362893;XP_013362894;XP_013362895;XP_013362896;XP_013362897;XP_013362898;XP_013362899 MODEL 8788416 ncrna LOC102012223 uncharacterized LOC102012223 NW_004955506 891734 899069 - 102012223 AGCD01065239;AGCD01065240;GBBH01030954;XR_264313 MODEL 8772217 ncrna LOC102007508 uncharacterized LOC102007508 NW_004955406 43082611 43102023 - 102007508 AGCD01006724;XR_001230800 MODEL 9034625 protein-coding Recql4 RecQ like helicase 4 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); bubble DNA binding (ortholog); DNA/DNA annealing activity (ortholog); INVOLVED IN DNA replication (ortholog); negative regulation of sister chromatid cohesion (ortholog); pigmentation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Baller-Gerold syndrome (ortholog); brain disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955454 3136097 3142525 - 102012055 AGCD01045057;GBDF01177422;XM_005395909;XM_005395911;XM_005395913 XP_005395966;XP_005395968;XP_005395970 MODEL 8810339 pseudo LOC102003206 cysteine and histidine-rich domain-containing protein 1-like NW_004955407 13581947 13582930 - 102003206 AGCD01007151 MODEL 8735089 protein-coding LOC102013407 uncharacterized LOC102013407 NW_004955415 13302201 13314397 + 102013407 AGCD01016246;GBDF01006431;XM_005380747;XM_005380748;XM_005380749;XR_001233193;XR_001233194;XR_001233195;XR_001233196;XR_260288 XP_005380804;XP_005380805;XP_005380806 MODEL 39131475 protein-coding C3orf85 chromosome 3 open reading frame 85 8762066 pseudo LOC102008651 olfactory receptor 5W2-like NW_004955511 816950 817885 + 102008651 AGCD01066344 MODEL 8771908 protein-coding Sgtb small glutamine rich tetratricopeptide repeat co-chaperone beta ENCODES a protein that exhibits Hsp70 protein binding (ortholog); identical protein binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN protein heterooligomerization (ortholog); protein homooligomerization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955446 3374363 3426284 + 102018871 AGCD01040011;AGCD01040012;AGCD01040013;AGCD01040014;AGCD01040015;GBDF01157752;XM_005392623;XM_005392624 XP_005392680;XP_005392681 MODEL 730469483 snorna SNORA2 Small nucleolar RNA SNORA2/SNORA34 family 8886854 protein-coding Phospho2 phosphatase, orphan 2 ENCODES a protein that exhibits pyridoxal phosphatase activity (ortholog) NW_004955449 4877521 4885927 - 102026056 AGCD01041902;GBDJ01062648;XM_005393250;XM_005393251;XM_013518730;XM_013518731 XP_005393307;XP_005393308;XP_013374184;XP_013374185 MODEL 8896606 protein-coding Spire2 spire type actin nucleation factor 2 INVOLVED IN actin cytoskeleton organization (ortholog); cleavage furrow formation (ortholog); establishment of meiotic spindle localization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cell cortex (ortholog); cleavage furrow (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955541 3341705 3359646 + 102017814 AGCD01071442;GBDJ01072643;GBDJ01072649;XM_013507994;XM_013507995;XM_013507997 XP_013363448;XP_013363449;XP_013363451 MODEL 9039655 protein-coding LOC102011841 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial ENCODES a protein that exhibits calcidiol 1-monooxygenase activity (ortholog); secalciferol 1-monooxygenase activity (ortholog); INVOLVED IN bone mineralization (ortholog); calcium ion homeostasis (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH Acidoses (ortholog); acute kidney failure (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955458 5472404 5477001 - 102011841 AGCD01047494;GBDF01140801;XM_005397416 XP_005397473 MODEL 39132526 snorna SNORA70 Small nucleolar RNA SNORA70 8814856 ncrna LOC102004241 uncharacterized LOC102004241 NW_004955407 29963859 29996079 + 102004241 AGCD01007621;GBDF01307914;XR_001231683;XR_259593 MODEL 8896208 trna Trnav-cac transfer RNA valine (anticodon CAC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978801 AGCD01050589;AGCD01052199;AGCD01057606;AGCD01061910;AGCD01069830;AGCD01076044;AGCD01080385 MODEL 8718303 protein-coding Lratd2 LRAT domain containing 2 ASSOCIATED WITH melanoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955461 1623114 1627515 - 102003740 AGCD01048818;GBBH01142184;XM_013521345 XP_013376799 MODEL 9056170 protein-coding Pkn3 protein kinase N3 INVOLVED IN epithelial cell migration (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955570 1121803 1131296 + 102006720 AGCD01074791;GBDF01093773;GBDI01353130;XM_005413576;XM_005413578 XP_005413633;XP_005413635 MODEL 8927609 pseudo LOC102016458 methylosome subunit pICln pseudogene NW_004955411 13133891 13135932 - 102016458 AGCD01011873 MODEL 8764834 protein-coding Rasgrf2 Ras protein specific guanine nucleotide releasing factor 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN long-term synaptic potentiation (ortholog); postsynaptic modulation of chemical synaptic transmission (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955418 28930666 29126495 - 102005807 AGCD01019448;AGCD01019449;AGCD01019450;AGCD01019451;AGCD01019452;AGCD01019453;GBDK01432521;XM_013512878 XP_013368332 MODEL 8781863 protein-coding Rnf157 ring finger protein 157 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of dendrite extension (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog) NW_004955506 6043473 6125157 + 102029421 AGCD01065398;AGCD01065399;AGCD01065400;AGCD01065401;AGCD01065402;GBBH01035030;GBDF01006339;XM_005407442;XM_005407444 XP_005407499;XP_005407501 MODEL 730468968 snorna SNORD94 Small nucleolar RNA SNORD94 8905494 protein-coding Tln2 talin 2 INVOLVED IN presynaptic actin cytoskeleton organization (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fascia adherens (ortholog) NW_004955450 12391049 12740232 - 102004540 AGCD01042701;AGCD01042702;AGCD01042703;AGCD01042704;AGCD01042705;AGCD01042706;AGCD01042707;AGCD01042708;GBCQ01035607;GBDJ01088994;XM_005393813 XP_005393870 MODEL 8703164 protein-coding Psmb6 proteasome 20S subunit beta 6 ENCODES a protein that exhibits threonine-type endopeptidase activity (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955467 10220435 10222470 + 102015495 AGCD01051555;GBDJ01010777;XM_005399601 XP_005399658 MODEL 8917460 pseudo LOC102013409 tubulin beta-4B chain pseudogene NW_004955415 32953159 32960953 + 102013409 AGCD01016743;AGCD01016744 MODEL 8932753 protein-coding Ss18 SS18 subunit of BAF chromatin remodeling complex ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); cytoskeleton organization (ortholog); ephrin receptor signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN microtubule cytoskeleton (ortholog); npBAF complex (ortholog); SWI/SNF complex (ortholog) NW_004955402 14140261 14210467 - 102012593 AGCD01000420;AGCD01000421;GBCB01109031;XM_005372726;XM_005372727;XM_005372728 XP_005372783;XP_005372784;XP_005372785 MODEL 8917430 pseudo LOC102011002 dolichol-phosphate mannosyltransferase subunit 1 pseudogene NW_004955416 12229992 12241469 - 102011002 AGCD01017202 MODEL 8752224 ncrna LOC102005678 uncharacterized LOC102005678 NW_004955461 3800451 3869319 - 102005678 AGCD01048855;GBDF01224739;XR_001236555;XR_263076;XR_263077 MODEL 8748199 protein-coding LOC102009035 uncharacterized LOC102009035 NW_004955413 33713020 33714649 + 102009035 AGCD01014688;GBDI01173861;XM_013511547;XM_013511548 XP_013367001;XP_013367002 MODEL 39131961 snorna SNORD116 Small nucleolar RNA SNORD116 730469377 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 8873519 protein-coding Proc protein C, inactivator of coagulation factors Va and VIIIa ENCODES a protein that exhibits identical protein binding (ortholog); oligopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN liver development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of blood coagulation (ortholog); PARTICIPATES IN coagulation cascade pathway; protease mediated signaling via protease-activated receptor 1; protein C anticoagulant pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955459 3097229 3105566 - 102004570 AGCD01048008;GBDJ01271470;XM_005397611;XM_005397612;XM_005397613;XM_005397614;XM_013521066;XM_013521067 XP_005397668;XP_005397669;XP_005397670;XP_005397671;XP_013376520;XP_013376521 MODEL 8858332 protein-coding Ptprs protein tyrosine phosphatase receptor type S ENCODES a protein that exhibits chondroitin sulfate binding (ortholog); heparin binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN cerebellum development (ortholog); cerebral cortex development (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); perikaryon (ortholog); plasma membrane (ortholog) NW_004955495 3943075 3991361 + 102029307 AGCD01061889;AGCD01061890;AGCD01061891;AGCD01061892;AGCD01061893;GBCB01088757;GBDF01128475;XM_013505293 XP_013360747 MODEL 8854456 protein-coding Trh thyrotropin releasing hormone ENCODES a protein that exhibits thyrotropin-releasing hormone activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adult walking behavior (ortholog); eating behavior (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amnestic disorder (ortholog); Bradycardia (ortholog); FOUND IN extracellular region (ortholog); secretory granule (ortholog) NW_004955429 17487275 17489385 - 102010610 AGCD01028858;GBBH01103008;XM_005387079;XM_013515365 XP_005387136;XP_013370819 MODEL 9062605 protein-coding Rhot1 ras homolog family member T1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); calcium ion binding (ortholog); GDP binding (ortholog); INVOLVED IN cellular homeostasis (ortholog); establishment of mitochondrion localization by microtubule attachment (ortholog); mitochondrial outer membrane permeabilization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955481 7149836 7199296 + 102023596 AGCD01057056;AGCD01057057;GBCE01134334;XM_005402812;XM_005402814;XM_013503493;XM_013503494;XM_013503495 XP_005402869;XP_005402871;XP_013358947;XP_013358948;XP_013358949 MODEL 8861434 protein-coding Wdr86 WD repeat domain 86 ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955491 5739715 5765469 - 102008115 AGCD01060499;AGCD01060500;AGCD01060501;GBCE01031431;GBCQ01153453;XM_005404830 XP_005404887 MODEL 9031716 pseudo LOC102006021 calcyclin-binding protein pseudogene NW_004955470 12066013 12067427 + 102006021 AGCD01052919 MODEL 8870227 pseudo LOC102004969 putative protein FAM10A5 NW_004955435 22847866 22848965 + 102004969 AGCD01033522 MODEL 8708380 pseudo LOC102010232 suppressor of cytokine signaling 5-like NW_004955458 3896343 3898873 + 102010232 AGCD01047353 MODEL 39133375 snrna U4 U4 spliceosomal RNA 8874220 protein-coding Erfl ETS repressor factor like NW_004955555 929984 941311 + 102008465 AGCD01073053;AGCD01073054;GBCE01120286;XM_005412413;XM_013508718 XP_005412470;XP_013364172 MODEL 8812200 pseudo LOC102018424 interferon-related developmental regulator 1 pseudogene NW_004955431 7302705 7305140 - 102018424 AGCD01030084;XR_261460 MODEL 8878168 protein-coding LOC102019609 sulfotransferase 1A1 NW_004955493 6774927 6778161 - 102019609 AGCD01061137;GBCB01070177;XM_005405179;XM_013504816 XP_005405236;XP_013360270 MODEL 8993276 protein-coding Pknox1 PBX/knotted 1 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); camera-type eye development (ortholog); erythrocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955407 38949060 38982984 - 102006875 AGCD01007815;AGCD01007816;GBCE01008569;XM_005375800;XM_005375801;XM_005375802 XP_005375857;XP_005375858;XP_005375859 MODEL 9066919 protein-coding LOC102007509 uncharacterized LOC102007509 NW_004955406 41604564 41614798 + 102007509 AGCD01006688;GBDI01238964;XM_013523033;XR_001237101;XR_001237102;XR_001237104;XR_001237106;XR_001237107 XP_013378487 MODEL 8871370 protein-coding Sowaha sosondowah ankyrin repeat domain family member A NW_004955408 4187724 4189059 + 102015929 AGCD01008091;GBCQ01088487;GBDI01055419;XM_005376574 XP_005376631 MODEL 8825724 protein-coding LOC102011407 olfactory receptor 9K2-like NW_004955458 2281743 2282727 + 102011407 AGCD01047223;XM_013520797 XP_013376251 MODEL 8710848 protein-coding C4bpa complement component 4 binding protein alpha INVOLVED IN binding of sperm to zona pellucida (ortholog); negative regulation of complement activation, classical pathway (ortholog); positive regulation of protein catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN acrosomal matrix (ortholog); acrosomal vesicle (ortholog); cell body (ortholog) NW_004955406 42613659 42641918 + 102028495 AGCD01006712;AGCD01006713;GBDI01193239;XM_005375423;XM_013502872;XM_013502874 XP_005375480;XP_013358326;XP_013358328 MODEL 8716929 protein-coding LOC102019954 DLA class II histocompatibility antigen, DR-1 beta chain-like NW_004955437 1153576 1167424 - 102019954 AGCD01034190;GBDI01262878;XM_005389451;XM_013517127;XM_013517128 XP_005389508;XP_013372581;XP_013372582 MODEL 8805685 protein-coding LOC102006374 olfactory receptor 5AL1-like NW_004955511 1550026 1550967 + 102006374 AGCD01066371;XM_005407965 XP_005408022 MODEL 8808493 protein-coding Plppr4 phospholipid phosphatase related 4 ENCODES a protein that exhibits lipid phosphatase activity (ortholog); lysophosphatidic acid phosphatase activity (ortholog); INVOLVED IN axonogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); inner ear development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN external side of plasma membrane (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955435 4085918 4112207 + 102021275 AGCD01032819;GBDF01303712;XM_005389095 XP_005389152 MODEL 8803046 protein-coding Phox2a paired like homeobox 2A ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN locus ceruleus development (ortholog); midbrain development (ortholog); noradrenergic neuron differentiation (ortholog); ASSOCIATED WITH congenital fibrosis of the extraocular muscles 2 (ortholog); Fibrosis (ortholog); genetic disease (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955414 19141589 19145486 + 102017975 AGCD01015300;AGCD01015301;XM_005380455 XP_005380512 MODEL 8933752 protein-coding Polr3g RNA polymerase III subunit G ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN cell population proliferation (ortholog); positive regulation of innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955418 21116812 21149818 - 102027072 AGCD01019257;AGCD01019258;AGCD01019259;AGCD01019260;GBDK01321607;XM_005382276;XM_005382277;XM_005382278;XM_005382279;XM_013512972 XP_005382333;XP_005382334;XP_005382335;XP_005382336;XP_013368426 MODEL 8873551 protein-coding Slc39a14 solute carrier family 39 member 14 ENCODES a protein that exhibits cadmium ion transmembrane transporter activity (ortholog); ferrous iron transmembrane transporter activity (ortholog); iron ion transmembrane transporter activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to insulin stimulus (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); congenital heart disease (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); early endosome membrane (ortholog) NW_004955403 45828247 45867309 + 102006304 AGCD01002837;AGCD01002838;GBCB01120359;XM_005373657;XM_013513817;XM_013513820;XM_013513823;XM_013513825;XM_013513828 XP_005373714;XP_013369271;XP_013369274;XP_013369277;XP_013369279;XP_013369282 MODEL 15036841 trna Trnav-gac transfer RNA valine (anticodon GAC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978799 8712782 protein-coding Senp5 SUMO specific peptidase 5 ENCODES a protein that exhibits SUMO-specific endopeptidase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN postsynaptic cytosol (ortholog); presynaptic cytosol (ortholog) NW_004955420 12943783 12975239 + 102016274 AGCD01020907;AGCD01020908;GBBH01137461;XM_005383146;XM_005383147;XM_005383149;XM_005383150 XP_005383203;XP_005383204;XP_005383206;XP_005383207 MODEL 39133404 snrna U2 U2 spliceosomal RNA 8992097 protein-coding Rpl35a ribosomal protein L35a ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); ribosomal large subunit biogenesis (ortholog); rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia 5 (ortholog); glioblastoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) NW_004955420 11957070 11960713 - 102026983 AGCD01020848;GBCQ01001912;XM_005383082;XM_005383083 XP_005383139;XP_005383140 MODEL 9050389 protein-coding Ppp2cb protein phosphatase 2 catalytic subunit beta ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of gene expression (ortholog); PARTICIPATES IN dopamine signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); FAR/SIN/STRIPAK complex (ortholog); nucleoplasm (ortholog) NW_004955463 7229717 7249490 - 102009155 AGCD01049725;GBCB01038556;XM_013521563 XP_013377017 MODEL 730469511 snorna SNORA2 Small nucleolar RNA SNORA2/SNORA34 family 8820360 protein-coding LOC102008652 heterogeneous nuclear ribonucleoprotein A1-like NW_004955514 3637451 3647575 + 102008652 AGCD01067102;XM_013506747 XP_013362201 MODEL 8831302 pseudo LOC102008273 cytochrome c, somatic pseudogene NW_004955446 3719779 3720140 - 102008273 AGCD01040028 MODEL 8925499 ncrna LOC102011004 uncharacterized LOC102011004 NW_004955418 480761 481468 + 102011004 AGCD01018677;GBDK01046238;XR_260530 MODEL 9066134 ncrna LOC102005685 uncharacterized LOC102005685 NW_004955412 2045158 2062851 - 102005685 AGCD01012534;GBDF01262267;XR_259966 MODEL 39132516 snorna SNORA70 Small nucleolar RNA SNORA70 8858668 protein-coding LOC102011844 cytochrome c oxidase assembly factor 1 homolog INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN mitochondrial complex I intermediate assembly complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955460 182778 285053 + 102011844 AGCD01048337;AGCD01048338;AGCD01048339;GBDF01047278;XM_005397712 XP_005397769 MODEL 9042882 pseudo LOC102004247 ATP synthase subunit beta, mitochondrial-like NW_004955458 6124218 6126126 - 102004247 AGCD01047552 MODEL 8779211 ncrna LOC102012226 uncharacterized LOC102012226 NW_004955511 1865704 1875638 + 102012226 AGCD01066381;AGCD01066382;GBDF01188738;XR_264414 MODEL 10276258 ncrna LOC106147499 uncharacterized LOC106147499 NW_004955408 25659454 25665560 - 106147499 AGCD01008649;GBDK01249518;XR_001232425;XR_001232426 MODEL 9050654 protein-coding LOC102022507 acyl carrier protein, mitochondrial NW_004955493 2134657 2139543 - 102022507 AGCD01060927;GBCC01013347;GBCE01030161;XM_013504895 XP_013360349 MODEL 8961405 protein-coding LOC102016467 signal-regulatory protein beta-1-like NW_004955470 300335 320458 - 102016467 AGCD01052609;GBCE01114114;XM_005400819 XP_005400876 MODEL 8735671 protein-coding Trhde thyrotropin releasing hormone degrading enzyme ASSOCIATED WITH cholangiocarcinoma (ortholog); long QT syndrome (ortholog); lung cancer (ortholog) NW_004955405 12229448 12624753 + 102006536 AGCD01004850;AGCD01004851;AGCD01004852;AGCD01004853;AGCD01004854;AGCD01004855;AGCD01004856;AGCD01004857;AGCD01004858;AGCD01004859;GBDI01314318;XM_005374325 XP_005374382 MODEL 8776199 protein-coding Rtf1 RTF1 homolog, Paf1/RNA polymerase II complex component ENCODES a protein that exhibits single-stranded DNA binding (ortholog); INVOLVED IN blastocyst growth (ortholog); chromatin organization (ortholog); endodermal cell fate commitment (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); dilated cardiomyopathy (ortholog); esophageal cancer (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955416 8237439 8293802 + 102007761 AGCD01017038;AGCD01017039;AGCD01017040;GBDF01090358;XM_005381285;XM_013512486 XP_005381342;XP_013367940 MODEL 8951713 protein-coding Lrba LPS responsive beige-like anchor protein INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); mitophagy (ortholog); protein localization to phagophore assembly site (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955471 5052535 5649696 - 102021651 AGCD01053095;AGCD01053096;AGCD01053097;AGCD01053098;AGCD01053099;AGCD01053100;AGCD01053101;AGCD01053102;AGCD01053103;AGCD01053104;AGCD01053105;AGCD01053106;AGCD01053107;GBCQ01037607;GBCQ01037609;XM_013522882 XP_013378336 MODEL 8745526 ncrna LOC102010234 uncharacterized LOC102010234 NW_004955463 10201295 10205872 - 102010234 AGCD01049806;GBDF01116012;XR_263170 MODEL 8914738 protein-coding Rasgrp1 RAS guanyl releasing protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); diacylglycerol binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN B cell activation (ortholog); B cell proliferation (ortholog); inflammatory response to antigenic stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); antiphospholipid syndrome (ortholog); endometriosis (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955416 5494030 5561608 - 102009602 AGCD01016914;GBCE01059250;GBDK01242028;XM_013512606 XP_013368060 MODEL 8857651 protein-coding Recql5 RecQ like helicase 5 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA helicase activity (ortholog); helicase activity (ortholog); INVOLVED IN cellular response to camptothecin (ortholog); cellular response to xenobiotic stimulus (ortholog); chromosome separation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955506 6574802 6612763 + 102015425 AGCD01065432;GBDI01137109;XM_005407490;XM_005407491 XP_005407547;XP_005407548 MODEL 616940648 snorna SNORD95 Small nucleolar RNA SNORD95 8774894 protein-coding Phox2b paired like homeobox 2B ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN autonomic nervous system development (ortholog); brainstem development (ortholog); cell development (ortholog); ASSOCIATED WITH Apnea (ortholog); colorectal cancer (ortholog); congenital central hypoventilation syndrome (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955443 5935975 5938747 + 102029129 AGCD01038244;AGCD01038245;XM_013518031 XP_013373485 MODEL 8788954 protein-coding Polr3gl RNA polymerase III subunit GL ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog); RNA polymerase III complex (ortholog) NW_004955568 120475 129990 - 102030133 AGCD01074503;GBDJ01234667;XM_005413422;XM_005413423;XM_013509352;XM_013509353 XP_005413479;XP_005413480;XP_013364806;XP_013364807 MODEL 8890332 protein-coding LOC102007511 immunoglobulin omega chain-like NW_004955455 6477568 6478007 + 102007511 AGCD01045797;GBDI01376516;XM_013520310 XP_013375764 MODEL 8749048 protein-coding Sh2b1 SH2B adaptor protein 1 INVOLVED IN cell motility (ortholog); lamellipodium assembly (ortholog); positive regulation of mitotic nuclear division (ortholog); PARTICIPATES IN leptin system pathway; ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955493 6583415 6592690 - 102014577 AGCD01061119;GBBH01065760;XM_005405163;XM_013504844;XM_013504845;XM_013504846;XM_013504847;XM_013504848;XM_013504849 XP_005405220;XP_013360298;XP_013360299;XP_013360300;XP_013360301;XP_013360302;XP_013360303 MODEL 8722008 protein-coding LOC102019611 zinc finger protein 260-like NW_004955495 925423 929850 - 102019611 AGCD01061661;GBDJ01370795;GBDK01143905;XM_013505071 XP_013360525 MODEL 8888424 protein-coding Psmb7 proteasome 20S subunit beta 7 ENCODES a protein that exhibits threonine-type endopeptidase activity (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); coat/hair pigmentation trait (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955419 3706273 3761603 + 102024910 AGCD01019733;GBDF01010387;XM_005382496 XP_005382553 MODEL 8702923 protein-coding Ss18l1 SS18L1 subunit of BAF chromatin remodeling complex INVOLVED IN dendrite development (ortholog); positive regulation of dendrite morphogenesis (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN condensed chromosome, centromeric region (ortholog); cytosol (ortholog); kinetochore (ortholog) NW_004955528 1849457 1881138 - 102004749 AGCD01069574;GBCB01004872;XM_005410035;XM_005410036;XM_005410037;XM_013507508;XM_013507509;XM_013507510;XR_264698 XP_005410092;XP_005410093;XP_005410094;XP_013362962;XP_013362963;XP_013362964 MODEL 8716588 protein-coding LOC102009036 60S ribosomal protein L5 NW_004955469 9922760 9923788 - 102009036 AGCD01052521;XM_005400516 XP_005400573 MODEL 730469601 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 8884148 protein-coding LOC102019955 olfactory receptor 2A12-like NW_004955537 2688342 2689280 + 102019955 AGCD01070934;XM_005410630 XP_005410687 MODEL 8853049 protein-coding Rhot2 ras homolog family member T2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); GDP binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN cellular homeostasis (ortholog); mitochondrial outer membrane permeabilization (ortholog); mitochondrion transport along microtubule (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955442 16528886 16534856 - 102021053 AGCD01037901;GBCE01095142;XM_005391623;XM_005391624;XM_013517763 XP_005391680;XP_005391681;XP_013373217 MODEL 8754794 ncrna LOC102005686 uncharacterized LOC102005686 NW_004955465 6940344 6948806 - 102005686 AGCD01050449;GBCB01122620;XR_263246 MODEL 8805453 protein-coding Rnf166 ring finger protein 166 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955541 2604197 2607969 - 102026476 AGCD01071418;GBBH01089671;GBCQ01067513;XM_013507955;XM_013507956;XM_013507957;XM_013507958 XP_013363409;XP_013363410;XP_013363411;XP_013363412 MODEL 8996258 ncrna LOC102003208 uncharacterized LOC102003208 NW_004955407 34429774 34446403 + 102003208 AGCD01007721;AGCD01007722;GBDF01176950;XR_259606 MODEL 39133377 snrna U4 U4 spliceosomal RNA 8876170 trna Trnav-uac transfer RNA valine (anticodon UAC) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe NW_004955586;NW_004955418;NW_004955511;NW_004955511 762475;25922316;4044144;4043788 762547;25922388;4044216;4043860 +;-;-;- 101978800 AGCD01019379;AGCD01066488;AGCD01076044 MODEL 8859452 pseudo LOC102013413 peptidyl-prolyl cis-trans isomerase-like 4 pseudogene NW_004955417 10686148 10688391 + 102013413 AGCD01018086 MODEL 8812103 protein-coding Sowahb sosondowah ankyrin repeat domain family member B NW_004955433 1537658 1541574 - 102015040 AGCD01031361;GBDI01052984;XM_005388187 XP_005388244 MODEL 8981912 protein-coding Erg ETS transcription factor ERG ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 37372471 37613674 - 102019363 AGCD01007780;AGCD01007781;AGCD01007782;AGCD01007783;AGCD01007784;AGCD01007785;GBDK01013561;XM_005375759;XM_005375760;XM_005375761;XM_013504784 XP_005375816;XP_005375817;XP_005375818;XP_013360238 MODEL 39131960 snorna SNORD116 Small nucleolar RNA SNORD116 8719720 protein-coding Ppp2r1a protein phosphatase 2 scaffold subunit Aalpha ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein antigen binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN chromosome segregation (ortholog); female meiotic nuclear division (ortholog); meiotic sister chromatid cohesion, centromeric (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Adrenal Insufficiency (ortholog); astigmatism (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, centromeric region (ortholog) NW_004955558 381794 410485 + 102004524 AGCD01073369;GBBH01030900;XM_005412660 XP_005412717 MODEL 8722127 protein-coding Proca1 protein interacting with cyclin A1 ENCODES a protein that exhibits cyclin binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955481 4451649 4461296 + 102024675 AGCD01056941;AGCD01056942;GBBH01155525;XM_005402725;XM_005402726;XM_005402728;XM_005402729;XM_005402730;XM_005402731;XM_005402733;XM_005402736;XM_005402737;XM_013503392;XM_013503393;XM_013503394;XM_013503395;XM_013503396;XM_013503397;XM_013503398 XP_005402782;XP_005402783;XP_005402785;XP_005402786;XP_005402787;XP_005402788;XP_005402790;XP_005402793;XP_005402794;XP_013358846;XP_013358847;XP_013358848;XP_013358849;XP_013358850;XP_013358851;XP_013358852 MODEL 9024498 protein-coding Ptprt protein tyrosine phosphatase receptor type T ENCODES a protein that exhibits alpha-actinin binding (ortholog); alpha-catenin binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to interleukin-6 (ortholog); homophilic cell-cell adhesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955445 14185751 14961000 + 102026919 AGCD01039812;AGCD01039813;AGCD01039814;AGCD01039815;AGCD01039816;AGCD01039817;AGCD01039818;AGCD01039819;AGCD01039820;AGCD01039821;AGCD01039822;AGCD01039823;AGCD01039824;AGCD01039825;AGCD01039826;AGCD01039827;AGCD01039828;GBCE01157673;XM_005392501;XM_013518366 XP_005392558;XP_013373820 MODEL 8912805 ncrna LOC102011005 uncharacterized LOC102011005 NW_004955418 27966614 27993848 - 102011005 AGCD01019421;AGCD01019422;GBDF01041994;XR_260587;XR_260588 MODEL 9046488 pseudo LOC102004970 dnaJ homolog subfamily C member 10-like NW_004955532 396089 401693 - 102004970 AGCD01070116;AGCD01070117 MODEL 8893524 protein-coding LOC102006024 ovomucoid-like NW_004955415 5904647 5909835 - 102006024 AGCD01016002;GBDF01085593;XM_005380639 XP_005380696 MODEL 8878228 protein-coding Spmap1 sperm microtubule associated protein 1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955451 13888362 13891524 - 102020739 AGCD01043512;AGCD01043513;GBDF01000383;XM_005394287 XP_005394344 MODEL 8995111 pseudo LOC102018426 coiled-coil domain-containing protein 152-like NW_004955432 5609953 5610904 + 102018426 AGCD01030791 MODEL 8982640 protein-coding Tlnrd1 talin rod domain containing 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN stress fiber (ortholog) NW_004955416 11739879 11742381 + 102021877 AGCD01017190;AGCD01017191;GBBH01207356;GBDK01234268;XM_005381439 XP_005381496 MODEL 8699698 protein-coding LOC102011408 zinc finger protein 354A NW_004955408 1675669 1691620 + 102011408 AGCD01007971;AGCD01007972;AGCD01007973;GBCB01038314;GBCB01038318;XM_013507993 XP_013363447 MODEL 8737693 protein-coding Pknox2 PBX/knotted 1 homeobox 2 ENCODES a protein that exhibits actin filament binding (ortholog); actin monomer binding (ortholog); DNA binding (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); Familial Prostate Cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); microtubule cytoskeleton (ortholog) NW_004955412 26214671 26468737 + 102019898 AGCD01013185;AGCD01013186;AGCD01013187;AGCD01013188;AGCD01013189;AGCD01013190;GBCE01069857;XM_005378457;XM_005378458;XM_013511208;XM_013511209 XP_005378514;XP_005378515;XP_013366662;XP_013366663 MODEL 8766291 protein-coding Lrch1 leucine rich repeats and calponin homology domain containing 1 INVOLVED IN cellular response to chemokine (ortholog); negative regulation of T cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955431 404575 501268 + 102009747 AGCD01029867;AGCD01029868;GBDI01262523;XM_013515721 XP_013371175 MODEL 8937339 trna Trnaw-cca transfer RNA tryptophan (anticodon CCA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978834 AGCD01005375;AGCD01048768;AGCD01051216;AGCD01051466;AGCD01051471;AGCD01057629 MODEL 8841786 protein-coding Rpl36 ribosomal protein L36 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); negative regulation of phospholipid transport (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955495 3729626 3731043 - 102024695 AGCD01061879;GBBH01002072;XM_005405761 XP_005405818 MODEL 8709568 protein-coding C4bpb complement component 4 binding protein beta INVOLVED IN negative regulation of complement activation, classical pathway (ortholog); positive regulation of protein catabolic process (ortholog); regulation of opsonization (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955406 42601164 42608912 + 102024876 AGCD01006712;GBDF01118429;XM_005375411 XP_005375468 MODEL 8709149 protein-coding LOC102007512 keratin-associated protein 10-7-like NW_004955407 41555800 41557892 - 102007512 AGCD01007870;XM_005375893 XP_005375950 MODEL 8789174 pseudo LOC102008653 dual specificity mitogen-activated protein kinase kinase 1 pseudogene NW_004955515 3622654 3623565 - 102008653 AGCD01067294 MODEL 8714236 protein-coding LOC102019614 olfactory receptor 10T2-like NW_004955495 8054019 8062946 - 102019614 AGCD01062177;XM_005406177 XP_005406234 MODEL 8968508 protein-coding Ss18l2 SS18 like 2 NW_004955420 28203226 28205284 - 102027534 AGCD01021472;GBCE01117079;XM_005383539 XP_005383596 MODEL 8727354 protein-coding Sowahc sosondowah ankyrin repeat domain family member C FOUND IN sperm annulus (ortholog); sperm flagellum (ortholog) NW_004955470 12699007 12702332 + 102007004 AGCD01052937;GBDF01250483;GBDK01218176;XM_013522810 XP_013378264 MODEL 8891262 protein-coding LOC102008274 cytochrome P450 3A17-like NW_004955573 1579916 1582530 - 102008274 AGCD01075071;AGCD01075072;GBDI01160800;GBDK01284967;XM_013509483 XP_013364937 MODEL 39132628 snorna SNORA70 Small nucleolar RNA SNORA70 8885766 protein-coding Wdr88 WD repeat domain 88 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955468 551574 563630 + 102015187 AGCD01051712;GBDF01088193;XM_013522282 XP_013377736 MODEL 8738985 ncrna LOC102011849 uncharacterized LOC102011849 NW_004955411 18463238 18501880 - 102011849 AGCD01012008;AGCD01012009;GBDI01303319;XR_259937 MODEL 8989404 pseudo LOC102016469 heat shock protein HSP 90-beta pseudogene NW_004955472 2722752 2724357 - 102016469 AGCD01053489 MODEL 9008476 protein-coding Slc39a2 solute carrier family 39 member 2 ENCODES a protein that exhibits metal ion transmembrane transporter activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN cadmium ion transmembrane transport (ortholog); keratinocyte differentiation (ortholog); zinc ion transmembrane transport (ortholog); ASSOCIATED WITH lung cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955550 1762905 1765254 + 102029800 AGCD01072587;GBCC01045952;XM_005412076;XM_005412077 XP_005412133;XP_005412134 MODEL 8749426 protein-coding Rhou ras homolog family member U ENCODES a protein that exhibits GTPase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); G1/S transition of mitotic cell cycle (ortholog); positive regulation of focal adhesion disassembly (ortholog); ASSOCIATED WITH high grade glioma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN focal adhesion (ortholog); Golgi membrane (ortholog); plasma membrane (ortholog) NW_004955492 8949003 8955502 - 102027538 AGCD01060832;GBCB01088846;GBDJ01277125;XM_005405025 XP_005405082 MODEL 8857165 protein-coding Trhr thyrotropin releasing hormone receptor ENCODES a protein that exhibits identical protein binding (ortholog); thyrotropin-releasing hormone receptor activity (ortholog); INVOLVED IN positive regulation of cytosolic calcium ion concentration (ortholog); positive regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH congenital hypothyroidism (ortholog); congenital nongoitrous hypothyroidism 7 (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955417 16529293 16565359 + 102021761 AGCD01018264;AGCD01018265;AGCD01018266;XM_005381876 XP_005381933 MODEL 8769583 protein-coding Rtf2 replication termination factor 2 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cellular response to hydroxyurea (ortholog); regulation of DNA stability (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955445 2729658 2764447 - 102009331 AGCD01039364;GBDF01005514;XM_005392267 XP_005392324 MODEL 39133290 snrna U2 U2 spliceosomal RNA 39133447 snorna SNORD96 Small nucleolar RNA SNORD96 family 626189185 snorna SNORA20 Small nucleolar RNA SNORA20 8825151 protein-coding Phpt1 phosphohistidine phosphatase 1 ENCODES a protein that exhibits actin filament binding (ortholog); calcium channel inhibitor activity (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); lamellipodium organization (ortholog); negative regulation of T cell receptor signaling pathway (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); developmental and epileptic encephalopathy 14 (ortholog); FOUND IN cytosol (ortholog); leading edge of lamellipodium (ortholog) NW_004955513 4930951 4932509 + 102026562 AGCD01066943;AGCD01066944;GBDJ01218548;XM_005408564 XP_005408621 MODEL 8770191 protein-coding Rasgrp2 RAS guanyl releasing protein 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955422 20426241 20440540 + 102003249 AGCD01023080;AGCD01023081;GBDJ01030510;GBDK01273984;XM_005384568 XP_005384625 MODEL 9018760 protein-coding Pkp1 plakophilin 1 ENCODES a protein that exhibits DNA binding (ortholog); lamin binding (ortholog); INVOLVED IN ameloblast differentiation (ortholog); desmosome assembly (ortholog); desmosome maintenance (ortholog); ASSOCIATED WITH alopecia (ortholog); ectodermal dysplasia (ortholog); Ectodermal Dysplasia-Skin Fragility Syndrome (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); desmosome (ortholog) NW_004955406 37420019 37465588 + 102012608 AGCD01006576;GBBH01066844;XM_005375169 XP_005375226 MODEL 730469478 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 8931996 pseudo LOC102012227 DNA/RNA-binding protein KIN17 pseudogene NW_004955511 978926 980086 + 102012227 AGCD01066350 MODEL 8987697 protein-coding Procr protein C receptor INVOLVED IN negative regulation of coagulation (ortholog); PARTICIPATES IN protease mediated signaling via protease-activated receptor 1; protein C anticoagulant pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN centrosome (ortholog); extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955422 26215757 26220396 - 102014795 AGCD01023281;AGCD01023282;GBBH01160494;GBDK01431932;XM_013514115 XP_013369569 MODEL 8785322 protein-coding LOC102022508 zinc finger protein 426-like NW_004955495 1108859 1135681 - 102022508 AGCD01061673;GBDK01293405;XM_013505074;XM_013505075;XM_013505076 XP_013360528;XP_013360529;XP_013360530 MODEL 8872071 ncrna LOC102005689 uncharacterized LOC102005689 NW_004955467 6901040 6907444 - 102005689 AGCD01051425;GBDF01303832;XR_263347 MODEL 8915235 protein-coding Senp6 SUMO specific peptidase 6 ENCODES a protein that exhibits SUMO-specific endopeptidase activity (ortholog); INVOLVED IN protein desumoylation (ortholog); protein modification by small protein removal (ortholog); regulation of kinetochore assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); postsynaptic cytosol (ortholog); presynaptic cytosol (ortholog) NW_004955502 4082217 4180696 + 102003042 AGCD01064327;AGCD01064328;AGCD01064329;AGCD01064330;GBDF01157242;GBDI01138539;XM_013505827 XP_013361281 MODEL 8887927 pseudo LOC102006025 copine-8 pseudogene NW_004955474 8226314 8227620 + 102006025 AGCD01054546 MODEL 8745286 pseudo LOC102003213 chromobox protein homolog 3 pseudogene NW_004955408 30983925 30997950 + 102003213 AGCD01008818;AGCD01008819 MODEL 8871437 ncrna LOC102018430 uncharacterized LOC102018430 NW_004955434 6923205 7013018 - 102018430 AGCD01032221;AGCD01032222;AGCD01032223;GBBH01025474;XR_001234808;XR_261613;XR_261615 MODEL 8860960 protein-coding Polr3h RNA polymerase III subunit H ENCODES a protein that exhibits DNA-directed RNA polymerase activity (ortholog); INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase III (ortholog); transcription initiation at RNA polymerase III promoter (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH asthma (ortholog); choreatic disease (ortholog); Deglutition Disorders (ortholog); FOUND IN centrosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 27065785 27072432 - 102018585 AGCD01014491;GBDF01289959;XM_005379351;XM_013511356;XM_013511357 XP_005379408;XP_013366810;XP_013366811 MODEL 9053667 protein-coding Plppr5 phospholipid phosphatase related 5 INVOLVED IN positive regulation of filopodium assembly (ortholog); positive regulation of neuron projection development (ortholog); ASSOCIATED WITH thymoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955435 3700217 3818532 - 102020949 AGCD01032802;AGCD01032803;AGCD01032804;AGCD01032805;GBDF01209569;GBDJ01158982;XM_013516396 XP_013371850 MODEL 8989405 protein-coding Sh2b2 SH2B adaptor protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); SH2 domain binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); antigen receptor-mediated signaling pathway (ortholog); B cell receptor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin filament (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955456 15253711 15265874 - 102016564 AGCD01046665;AGCD01046666;GBCB01101553;GBDI01137601;XM_013520635 XP_013376089 MODEL 15036850 trna Trnay-aua transfer RNA tyrosine (anticodon AUA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe 101978818 39131959 snorna SNORD116 Small nucleolar RNA SNORD116 8961290 protein-coding LOC102013416 butyrophilin subfamily 2 member A2 NW_004955483 413795 498359 - 102013416 AGCD01057609;AGCD01057610;AGCD01057611;AGCD01057612;AGCD01057613;AGCD01057614;AGCD01057615;AGCD01057616;AGCD01057617;AGCD01057618;AGCD01057619;GBDJ01002979;XM_005403285;XM_013503774;XM_013503775;XM_013503776;XM_013503777;XM_013503779;XM_013503780;XM_013503781 XP_005403342;XP_013359228;XP_013359229;XP_013359230;XP_013359231;XP_013359233;XP_013359234;XP_013359235 MODEL 8755389 pseudo LOC102004250 nucleophosmin pseudogene NW_004955409 17023845 17033338 - 102004250 AGCD01009756;AGCD01009757;AGCD01009758;XM_005377160 MODEL 10185753 ncrna LOC106147501 uncharacterized LOC106147501 NW_004955569 1585930 1589649 - 106147501 AGCD01074671;GBDJ01218452;XR_001232428 MODEL 8966923 protein-coding LOC102019957 E3 ubiquitin-protein ligase RNF4-like NW_004955437 9151213 9163753 - 102019957 AGCD01034518;AGCD01034519;AGCD01034520;AGCD01034521;AGCD01034522;GBDF01012766;XM_005390135 XP_005390192 MODEL 8908613 protein-coding Erg28 ergosterol biosynthesis 28 homolog ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN transport vesicle (ortholog) NW_004955612 99107 109679 - 102022872 AGCD01077180;GBDK01014402;XM_005414961;XM_005414962 XP_005415018;XP_005415019 MODEL 8768942 protein-coding Sowahd sosondowah ankyrin repeat domain family member D ASSOCIATED WITH COVID-19 (ortholog) NW_004955534 220999 222550 - 102008980 AGCD01070441;GBBH01135014;XM_005410434 XP_005410491 MODEL 8959850 protein-coding LOC102009041 natural cytotoxicity triggering receptor 3 ligand 1-like NW_004955414 32155049 32171552 + 102009041 AGCD01015774;AGCD01015775;AGCD01015776;GBDF01277682;XM_005380380;XM_005380381;XM_013512029 XP_005380437;XP_005380438;XP_013367483 MODEL 8784437 protein-coding Ppp2r1b protein phosphatase 2 scaffold subunit Abeta INVOLVED IN apoptotic process involved in morphogenesis (ortholog); positive regulation of extrinsic apoptotic signaling pathway in absence of ligand (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); membrane raft (ortholog); synapse (ortholog) NW_004955412 13458078 13494583 - 102015938 AGCD01012836;AGCD01012837;AGCD01012838;GBDF01004755;XM_013511030;XM_013511031;XM_013511032;XM_013511033;XM_013511034;XM_013511035;XM_013511036;XM_013511037;XM_013511038 XP_013366484;XP_013366485;XP_013366486;XP_013366487;XP_013366488;XP_013366489;XP_013366490;XP_013366491;XP_013366492 MODEL 9029306 ncrna LOC102004973 uncharacterized LOC102004973 NW_004955438 10817523 10828435 - 102004973 AGCD01035218;GBDF01251958;XR_261926 MODEL 9027960 protein-coding Ptpru protein tyrosine phosphatase receptor type U ENCODES a protein that exhibits beta-catenin binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); homotypic cell-cell adhesion (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell-cell junction (ortholog) NW_004955452 8223773 8296769 + 102026069 AGCD01044212;AGCD01044213;AGCD01044214;GBDJ01076331;XM_005394989;XM_005394992;XM_005394993;XM_013519598;XM_013519599;XM_013519600 XP_005395046;XP_005395049;XP_005395050;XP_013375052;XP_013375053;XP_013375054 MODEL 8930364 protein-coding Spmap2 sperm microtubule associated protein 2 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955495 7261378 7269390 + 102025595 AGCD01062128;AGCD01062129;GBDF01007138;XM_005406042;XM_005406043;XM_005406044;XM_005406045 XP_005406099;XP_005406100;XP_005406101;XP_005406102 MODEL 8935375 protein-coding Rnf167 ring finger protein 167 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to leucine starvation (ortholog); lysosome localization (ortholog); negative regulation of cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endolysosome membrane (ortholog) NW_004955467 10352650 10357214 + 102018910 AGCD01051561;GBDF01052138;XM_005399611;XM_005399612 XP_005399668;XP_005399669 MODEL 8709129 protein-coding Wdr89 WD repeat domain 89 INVOLVED IN corpus callosum development (ortholog); ventricular system development (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955466 6171553 6204818 + 102007319 AGCD01050912;AGCD01050913;AGCD01050914;GBDF01276584;XM_005399148;XM_005399149;XM_005399150;XM_005399151;XM_013522006;XM_013522007 XP_005399205;XP_005399206;XP_005399207;XP_005399208;XP_013377460;XP_013377461 MODEL 39133378 snrna U4 U4 spliceosomal RNA 9050458 protein-coding LOC102010235 cytochrome P450 4X1 ENCODES a protein that exhibits anandamide 14,15 epoxidase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955464 11373217 11415433 - 102010235 AGCD01050149;AGCD01050150;AGCD01050151;AGCD01050152;AGCD01050153;GBDI01243736;XM_013521750;XM_013521751;XM_013521752;XR_001236710 XP_013377204;XP_013377205;XP_013377206 MODEL 8878986 pseudo LOC102022509 guanylate-binding protein 4-like NW_004955423 4993794 5018433 - 102022509 AGCD01023551 MODEL 8933653 ncrna LOC102016474 uncharacterized LOC102016474 NW_004955478 10412000 10415456 + 102016474 AGCD01056133;GBDF01003391;XR_263715 MODEL 8793566 protein-coding Slc39a3 solute carrier family 39 member 3 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); embryonic cranial skeleton morphogenesis (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN apical plasma membrane (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); plasma membrane (ortholog) NW_004955899 808 9721 + 102023969 AGCD01078617;GBDF01044519;XM_005415143 XP_005415200 MODEL 8877944 protein-coding Triap1 TP53 regulated inhibitor of apoptosis 1 ENCODES a protein that exhibits p53 binding (ortholog); phosphatidic acid transfer activity (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955455 11195399 11198402 + 102011402 AGCD01045986;GBCQ01036220;XM_005396508 XP_005396565 MODEL 8859125 protein-coding LOC102006375 olfactory receptor 5B3-like NW_004955511 3661944 3662882 - 102006375 AGCD01066472;XM_005408047 XP_005408104 MODEL 39133737 snorna SNORD97 Small nucleolar RNA SNORD97 8808660 protein-coding Rpl36a ribosomal protein L36a ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955503 7520530 7523593 + 102026551 AGCD01064794;AGCD01064795;GBBH01002041;GBDI01009649;XM_013505856 XP_013361310 MODEL 8809508 protein-coding Lrch2 leucine rich repeats and calponin homology domain containing 2 ASSOCIATED WITH cerebellar ataxia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955490 569526 678626 + 102026435 AGCD01060071;AGCD01060072;AGCD01060073;AGCD01060074;AGCD01060075;AGCD01060076;AGCD01060077;AGCD01060078;AGCD01060079;AGCD01060080;AGCD01060081;GBDF01306181;GBDJ01221232;XM_013504515 XP_013359969 MODEL 9009192 protein-coding Psmb8 proteasome 20S subunit beta 8 INVOLVED IN antigen processing and presentation (ortholog); fat cell differentiation (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); bronchiectasis (ortholog); Chediak-Higashi syndrome (ortholog); FOUND IN proteasome complex (ortholog); proteasome core complex (ortholog); spermatoproteasome complex (ortholog) NW_004955437 1500477 1504072 - 102022537 AGCD01034212;GBDJ01021170;XM_005389457 XP_005389514 MODEL 8748192 pseudo LOC102007514 COMM domain-containing protein 1-like NW_004955407 20893031 20899078 - 102007514 AGCD01007345 MODEL 8937492 protein-coding C5ar1 complement C5a receptor 1 ENCODES a protein that exhibits complement component C5a binding (ortholog); complement component C5a receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); amyloid-beta clearance (ortholog); animal organ regeneration (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); adult respiratory distress syndrome (ortholog); Alzheimer's disease (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955574 1221942 1229634 + 102008996 AGCD01075168;AGCD01075169;GBDK01317924;XM_005413864 XP_005413921 MODEL 8828788 protein-coding LOC102011006 olfactory receptor 2T11 NW_004955418 30157574 30163444 - 102011006 AGCD01019506;XM_005382367 XP_005382424 MODEL 8868704 pseudo LOC102008654 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 pseudogene NW_004955516 2082890 2085194 + 102008654 AGCD01067447 MODEL 8785651 protein-coding LOC102008275 olfactory receptor 2B6-like NW_004955576 1201716 1202654 - 102008275 AGCD01075364;XM_005413943 XP_005414000 MODEL 8831381 ncrna LOC102011851 uncharacterized LOC102011851 NW_004955412 12945686 12959032 - 102011851 AGCD01012826;GBDF01076106;XR_259986 MODEL 730469480 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 8825727 pseudo LOC102011411 60S ribosomal protein L18a pseudogene NW_004955459 4048909 4049495 + 102011411 AGCD01048022 MODEL 9021853 protein-coding Tlr1 toll like receptor 1 ENCODES a protein that exhibits identical protein binding (ortholog); lipopeptide binding (ortholog); lipopolysaccharide immune receptor activity (ortholog); INVOLVED IN cellular response to triacyl bacterial lipopeptide (ortholog); defense response (ortholog); detection of triacyl bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH aspergillosis (ortholog); asthma (ortholog); Brain Injuries (ortholog); FOUND IN Golgi apparatus (ortholog); membrane raft (ortholog); plasma membrane (ortholog) NW_004955443 8442419 8450318 + 102004332 AGCD01038326;GBBH01222008;GBCE01080086;XM_005391996 XP_005392053 MODEL 730469525 snorna SNORA20 Small nucleolar RNA SNORA20 8979095 protein-coding LOC102006026 cystatin-13-like NW_004955415 30473505 30482358 + 102006026 AGCD01016664;GBDF01008193;XM_005380973 XP_005381030 MODEL 9058790 protein-coding LOC102019616 melanoma-associated antigen 10-like NW_004955498 2708546 2709343 - 102019616 AGCD01062827;XM_005406472 XP_005406529 MODEL 9023803 protein-coding Pkp2 plakophilin 2 ENCODES a protein that exhibits alpha-catenin binding (ortholog); DNA binding (ortholog); intermediate filament binding (ortholog); INVOLVED IN adherens junction maintenance (ortholog); bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cardiac muscle cell action potential (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); cell junction (ortholog) NW_004955505 2878001 2959299 + 102026770 AGCD01065008;AGCD01065009;GBBH01214867;GBDK01128347;XM_013505957 XP_013361411 MODEL 8887140 protein-coding LOC102013418 actin-like NW_004955420 22322153 22323606 - 102013418 AGCD01021196;GBCQ01147818;XM_013513570 XP_013369024 MODEL 8829762 protein-coding Plrg1 pleiotropic regulator 1 INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of G1/S transition of mitotic cell cycle (ortholog); protein localization to nucleus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); DNA replication factor A complex (ortholog); fibrillar center (ortholog) NW_004955471 8764465 8777396 - 102007988 AGCD01053193;AGCD01053194;GBDJ01085184;XM_005400930 XP_005400987 MODEL 8975436 protein-coding Polr3k RNA polymerase III subunit K ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN termination of RNA polymerase III transcription (ortholog); transcription by RNA polymerase III (ortholog); transcription initiation at RNA polymerase III promoter (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acromesomelic dysplasia 4 (ortholog); acute myeloid leukemia (ortholog); Disease Progression (ortholog); FOUND IN RNA polymerase III complex (ortholog) NW_004955442 17101585 17106689 + 102010204 AGCD01037937;GBDI01260720;XM_005391684 XP_005391741 MODEL 8764700 protein-coding Rasgrp3 RAS guanyl releasing protein 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog) NW_004955441 1679258 1786397 + 102025514 AGCD01036756;AGCD01036757;GBCE01012394;XM_005390850;XM_005390851;XM_005390852;XM_005390853;XM_005390854;XM_005390855;XM_005390856;XM_013517629 XP_005390907;XP_005390908;XP_005390909;XP_005390910;XP_005390911;XP_005390912;XP_005390913;XP_013373083 MODEL 10315929 ncrna LOC106147502 uncharacterized LOC106147502 NW_004955569 1128461 1130913 - 106147502 AGCD01074640;GBDF01074837;XR_001232429 MODEL 8956473 ncrna LOC102005690 uncharacterized LOC102005690 NW_004955413 2434741 2435420 - 102005690 AGCD01013546;GBDF01017398;XR_260051 MODEL 8717643 protein-coding Ergic1 endoplasmic reticulum-golgi intermediate compartment 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); arthrogryposis multiplex congenita (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) NW_004955408 25540149 25644108 + 102027272 AGCD01008647;GBCB01057939;XM_005376342;XM_013509355;XM_013509357;XM_013509359 XP_005376399;XP_013364809;XP_013364811;XP_013364813 MODEL 39133299 snrna U2 U2 spliceosomal RNA 8792815 protein-coding Rtkn rhotekin ENCODES a protein that exhibits GTPase inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN regulation of apoptotic process (ortholog); Rho protein signal transduction (ortholog); signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955424 11344504 11358344 + 102027998 AGCD01024564;GBCB01061023;XM_005385506;XM_005385507;XM_005385508;XM_005385509;XM_013514740 XP_005385563;XP_005385564;XP_005385565;XP_005385566;XP_013370194 MODEL 39133379 snrna U4 U4 spliceosomal RNA 9055647 ncrna LOC102010236 uncharacterized LOC102010236 NW_004955465 1021083 1041695 - 102010236 AGCD01050329;GBDF01287130;XR_263230 MODEL 8915617 pseudo LOC102018433 60S ribosomal protein L23a pseudogene NW_004955527 2330626 2331113 + 102018433 AGCD01069431 MODEL 9029747 pseudo LOC102003214 graves disease carrier protein pseudogene NW_004955459 10102037 10104221 + 102003214 AGCD01048180 MODEL 39132936 snorna SNORD98 Small nucleolar RNA SNORD98 8752585 pseudo LOC102016475 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 pseudogene NW_004955416 20842499 20843310 + 102016475 AGCD01017471 MODEL 39132490 snorna SNORA70 Small nucleolar RNA SNORA70 8905457 trna Trnay-gua transfer RNA tyrosine (anticodon GUA) This record serves to anchor the annotations of this class of tRNAs at multiple locations on the chinchilla, long-tailed genome. The placements are predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMe MT 1 1 101978819 AGCD01039088;AGCD01052488;AGCD01057606;AGCD01072575;AGCD01072578 MODEL 8705616 protein-coding Redic1 regulator of DNA class I crossover intermediates 1 ASSOCIATED WITH spermatogenic failure (ortholog); FOUND IN chromosome (ortholog) NW_004955505 676988 763746 - 102029312 AGCD01064961;GBDF01155084;XM_005407103;XM_005407106;XM_013505952;XM_013505953;XM_013505954;XM_013505955;XM_013505956 XP_005407160;XP_005407163;XP_013361406;XP_013361407;XP_013361408;XP_013361409;XP_013361410 MODEL 39131958 snorna SNORD116 Small nucleolar RNA SNORD116 8809840 ncrna LOC102012234 uncharacterized LOC102012234 NW_004955433 7547240 7568531 + 102012234 AGCD01031573;GBDF01235477;XR_001234708;XR_001234709;XR_001234710 MODEL 8886398 pseudo LOC102009045 60S ribosomal protein L12-like NW_004955475 11058006 11058745 + 102009045 AGCD01055139 MODEL 8788525 protein-coding Sox10 SRY-box transcription factor 10 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN cell differentiation (ortholog); cell maturation (ortholog); cellular response to progesterone stimulus (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); Kallmann syndrome (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); mitochondrial outer membrane (ortholog) NW_004955413 24313311 24323112 - 102013710 AGCD01014360;GBBH01007145;XM_005379237 XP_005379294 MODEL 8837887 protein-coding Rhov ras homolog family member V ASSOCIATED WITH cervical cancer (ortholog); urinary bladder cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN endosome membrane (ortholog); plasma membrane (ortholog) NW_004955416 7741762 7743816 - 102029074 AGCD01017008;GBDI01297240;XM_005381268 XP_005381325 MODEL 9008992 protein-coding Ptprz1 protein tyrosine phosphatase receptor type Z1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); integrin binding (ortholog); phosphatase activity (ortholog); INVOLVED IN axonal fasciculation (ortholog); axonogenesis (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Brain Hypoxia-Ischemia (ortholog); Brain Injuries (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendritic spine (ortholog) NW_004955479 3611658 3734225 + 102021008 AGCD01056301;GBDI01323065;XM_013503257 XP_013358711 MODEL 8802521 protein-coding Ppp2r2a protein phosphatase 2 regulatory subunit Balpha ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); phosphoprotein phosphatase activity (ortholog); protein phosphatase 2A binding (ortholog); INVOLVED IN regulation of chromosome segregation (ortholog); response to morphine (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Chromosomal Instability (ortholog); colon adenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); protein phosphatase type 2A complex (ortholog); protein serine/threonine phosphatase complex (ortholog) NW_004955403 49042188 49113743 + 102026933 AGCD01002935;GBCB01025310;GBDI01135179;XM_013514116 XP_013369570 MODEL 8912663 protein-coding Spmap2l sperm microtubule associated protein 2 like ASSOCIATED WITH acute myeloid leukemia (ortholog) NW_004955447 14454884 14496320 - 102006511 AGCD01041006;GBDF01000151;XM_013518495;XM_013518496 XP_013373949;XP_013373950 MODEL 8699845 protein-coding Prodh2 proline dehydrogenase 2 ENCODES a protein that exhibits oxidoreductase activity, acting on the CH-NH group of donors (ortholog); oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor (ortholog); proline dehydrogenase activity (ortholog); INVOLVED IN trans-4-hydroxy-L-proline catabolic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955468 2747870 2754621 + 102017216 AGCD01051834;AGCD01051835;GBCQ01009142;XM_005399947 XP_005400004 MODEL 8948179 protein-coding Phrf1 PHD and ring finger domains 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); RNA polymerase binding (ortholog); INVOLVED IN mRNA processing (ortholog); transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955476 11446194 11476892 - 102015313 AGCD01055458;AGCD01055459;GBDI01217169;XM_005401832;XM_005401833 XP_005401889;XP_005401890 MODEL 8957493 protein-coding Wdr90 WD repeat domain 90 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN centriole elongation (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955442 16534951 16552856 - 102020724 AGCD01037901;GBDF01080193;XM_005391622;XM_013517761;XM_013517762;XR_001235382 XP_005391679;XP_013373215;XP_013373216 MODEL 8779862 protein-coding LOC102006376 olfactory receptor 5L1-like NW_004955511 671617 672567 + 102006376 AGCD01066337;XM_005408205 XP_005408262 MODEL 8883480 protein-coding Trib1 tribbles pseudokinase 1 ENCODES a protein that exhibits mitogen-activated protein kinase kinase binding (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of JNK cascade (ortholog); negative regulation of lipopolysaccharide-mediated signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); coronary artery disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955461 494003 501928 + 102030050 AGCD01048795;GBDF01159528;XM_005397987 XP_005398044 MODEL 8868589 protein-coding Sh2b3 SH2B adaptor protein 3 ENCODES a protein that exhibits phosphate ion binding (ortholog); protein tyrosine kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to chemokine (ortholog); cellular response to interleukin-3 (ortholog); PARTICIPATES IN erythropoietin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); Breast Cancer, Familial (ortholog); chronic myeloid leukemia (ortholog) NW_004955482 8079905 8100791 + 102006034 AGCD01057503;GBDI01138139;XM_013503649 XP_013359103 MODEL 8967940 protein-coding Rpl36al ribosomal protein L36a like ASSOCIATED WITH esophageal cancer (ortholog); thymoma (ortholog); FOUND IN nucleus (ortholog) NW_004955409 13032499 13033876 + 102030284 AGCD01009587;GBCQ01008014;XM_005376842;XM_005376843 XP_005376899;XP_005376900 MODEL 8985084 protein-coding Lrch3 leucine rich repeats and calponin homology domain containing 3 INVOLVED IN septin cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytosol (ortholog) NW_004955420 11998567 12086872 - 102027530 AGCD01020849;AGCD01020850;AGCD01020851;GBDI01011641;XM_005383084;XM_005383085;XM_005383086;XM_005383087;XM_005383088;XM_005383089;XM_013513362;XR_001233690 XP_005383141;XP_005383142;XP_005383143;XP_005383144;XP_005383145;XP_005383146;XP_013368816 MODEL 8901800 pseudo LOC102007517 swi5-dependent recombination DNA repair protein 1 homolog pseudogene NW_004955408 24197900 24198617 + 102007517 AGCD01008599 MODEL 8755528 protein-coding LOC102011010 steroid 17-alpha-hydroxylase/17,20 lyase ENCODES a protein that exhibits heme binding (ortholog); steroid 17-alpha-monooxygenase activity (ortholog); INVOLVED IN adrenal gland development (ortholog); androgen biosynthetic process (ortholog); cellular response to antibiotic (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH 17,20-Lyase Deficiency, Isolated (ortholog); amenorrhea (ortholog); breast cancer (ortholog); FOUND IN axon (ortholog); cell projection (ortholog); endoplasmic reticulum (ortholog) NW_004955485 7615132 7652899 + 102011010 AGCD01058665;AGCD01058666;AGCD01058667;AGCD01058668;AGCD01058669;GBDF01163210;XM_005403822 XP_005403879 MODEL 8990774 protein-coding C5ar2 complement C5a receptor 2 INVOLVED IN negative regulation of interleukin-6 production (ortholog); negative regulation of neutrophil chemotaxis (ortholog); negative regulation of tumor necrosis factor production (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical part of cell (ortholog); basal plasma membrane (ortholog); plasma membrane (ortholog) NW_004955574 1221950 1242547 + 102008790 AGCD01075168;AGCD01075169;AGCD01075170;AGCD01075171;XM_005413863;XM_013509538;XM_013509539 XP_005413920;XP_013364992;XP_013364993 MODEL 8791757 ncrna LOC102008655 uncharacterized LOC102008655 NW_004955434 11901814 11906490 - 102008655 AGCD01032382;GBDF01223017;XR_001234777 MODEL 8987885 protein-coding Pkp3 plakophilin 3 ENCODES a protein that exhibits alpha-catenin binding (ortholog); cell adhesion molecule binding (ortholog); enzyme binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); desmosome assembly (ortholog); desmosome organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); cell-cell junction (ortholog) NW_004955476 11611240 11619210 - 102024793 AGCD01055466;GBCQ01150316;XM_005401870 XP_005401927 MODEL 8812028 pseudo LOC102012238 ras GTPase-activating protein-binding protein 2 pseudogene NW_004955526 2838596 2839845 + 102012238 AGCD01069322 MODEL 730469507 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 8913414 protein-coding Pls1 plastin 1 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); intestinal D-glucose absorption (ortholog); microvillus assembly (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 76 (ortholog); FOUND IN brush border (ortholog); cytoplasm (ortholog); stereocilium (ortholog) NW_004955508 3215304 3324240 - 102012672 AGCD01065806;GBDI01000738;XM_005407737;XM_013506262 XP_005407794;XP_013361716 MODEL 8961650 protein-coding Senp7 SUMO specific peptidase 7 ENCODES a protein that exhibits SUMO-specific endopeptidase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); protein desumoylation (ortholog); ASSOCIATED WITH atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955427 2925159 3091932 - 102028108 AGCD01026907;AGCD01026908;AGCD01026909;AGCD01026910;AGCD01026911;AGCD01026912;AGCD01026913;AGCD01026914;GBCQ01128169;XM_005386320;XM_013515198;XM_013515199;XM_013515200;XM_013515201;XM_013515202;XM_013515203 XP_005386377;XP_013370652;XP_013370653;XP_013370654;XP_013370655;XP_013370656;XP_013370657 MODEL 9060796 protein-coding Rnf168 ring finger protein 168 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H2AK15 ubiquitin ligase activity (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response (ortholog); DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN DNA repair complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955420 12656815 12676836 - 102012653 AGCD01020881;AGCD01020882;AGCD01020883;AGCD01020884;GBBH01126409;GBCE01023807;XM_013513503 XP_013368957 MODEL 9032646 ncrna LOC102022510 uncharacterized LOC102022510 NW_004955424 1640539 1648980 + 102022510 AGCD01024243;XR_261026 MODEL 39133110 snrna U2 U2 spliceosomal RNA 8911021 protein-coding Ptrh1 peptidyl-tRNA hydrolase 1 homolog ENCODES a protein that exhibits peptidyl-tRNA hydrolase activity (ortholog); INVOLVED IN rescue of stalled cytosolic ribosome (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) NW_004955419 940508 942375 + 102028195 AGCD01019624;GBDI01009713;XM_005382417 XP_005382474 MODEL 8818519 protein-coding Tlr10 toll like receptor 10 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); pulmonary tuberculosis (ortholog); FOUND IN signaling receptor complex (ortholog) NW_004955443 8442439 8468966 + 102004650 AGCD01038326;AGCD01038327;XM_005391997;XM_013518055 XP_005392054;XP_013373509 MODEL 8794617 protein-coding LOC102006031 zinc finger protein 14-like NW_004955417 31556784 31573000 - 102006031 AGCD01018655;AGCD01018656;GBDJ01003802;XM_013512775 XP_013368229 MODEL 8834093 protein-coding Psmb9 proteasome 20S subunit beta 9 ENCODES a protein that exhibits proteasome binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to electrical stimulus (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH acrodermatitis (ortholog); adult respiratory distress syndrome (ortholog); ankylosing spondylitis (ortholog); FOUND IN cytosol (ortholog); proteasome complex (ortholog); proteasome core complex (ortholog) NW_004955437 1513425 1516164 + 102023191 AGCD01034213;GBBH01002903;GBCB01109043;XM_005389459 XP_005389516 MODEL 39132503 snorna SNORA70 Small nucleolar RNA SNORA70 8922097 protein-coding LOC102004253 kinesin-associated protein 3 NW_004955462 6220175 6390544 - 102004253 AGCD01049277;AGCD01049278;AGCD01049279;AGCD01049280;GBDI01178752;XM_005398164;XM_005398165;XM_005398168;XM_005398169;XM_013521457;XM_013521458 XP_005398221;XP_005398222;XP_005398225;XP_005398226;XP_013376911;XP_013376912 MODEL 8911051 trna trnC(gca) tRNA-Cys MT 5191 5257 - 15822223 8708668 pseudo LOC102019617 serine-rich coiled-coil domain-containing protein 2 pseudogene NW_004955424 3832086 3840893 + 102019617 AGCD01024331 MODEL 8803265 protein-coding Ssb small RNA binding exonuclease protection factor La ENCODES a protein that exhibits poly(U) RNA binding (ortholog); RNA binding (ortholog); sequence-specific mRNA binding (ortholog); INVOLVED IN IRES-dependent viral translational initiation (ortholog); nuclear histone mRNA catabolic process (ortholog); protein localization to cytoplasmic stress granule (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955449 4806468 4815175 - 102024070 AGCD01041895;AGCD01041896;AGCD01041897;AGCD01041898;GBCQ01004014;XM_013518786 XP_013374240 MODEL 9026784 pseudo LOC102004974 ras-related protein Rab-5A pseudogene NW_004955438 15450726 15451498 + 102004974 AGCD01035367 MODEL 8736415 protein-coding LOC102008276 olfactory receptor 2H1 NW_004955583 74419 75726 + 102008276 AGCD01075793;GBDI01145055;XM_005414287 XP_005414344 MODEL 8816594 protein-coding Rasgrp4 RAS guanyl releasing protein 4 ENCODES a protein that exhibits diacylglycerol binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of natural killer cell mediated immunity (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955468 1007082 1020744 + 102013157 AGCD01051748;GBDK01016923;XM_005399844;XM_013522410;XM_013522411;XM_013522412 XP_005399901;XP_013377864;XP_013377865;XP_013377866 MODEL 10288535 ncrna LOC106147503 uncharacterized LOC106147503 NW_004955570 1633402 1639631 + 106147503 AGCD01074820;GBDK01096877;XR_001232430 MODEL 39131487 protein-coding C6orf163 chromosome 6 open reading frame 163 9056454 pseudo LOC102012243 ubiquitin-like protein FUBI pseudogene NW_004955538 2573003 2573441 + 102012243 AGCD01071128 MODEL 8946485 protein-coding Sox11 SRY-box transcription factor 11 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN closure of optic fissure (ortholog); cornea development in camera-type eye (ortholog); embryonic digestive tract morphogenesis (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955487 2678961 2680869 - 102014907 AGCD01059264;XM_005404366 XP_005404423 MODEL 8770540 protein-coding Prok1 prokineticin 1 INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of MAPK cascade (ortholog); regulation of angiogenesis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog) NW_004955435 13930897 13935335 + 102018967 AGCD01033212;XM_005388924 XP_005388981 MODEL 730469131 snorna SNORA21 Small nucleolar RNA SNORA21 8994313 pseudo LOC102018434 60S ribosomal protein L9 pseudogene NW_004955436 21412782 21413746 + 102018434 AGCD01034053 MODEL 8775286 protein-coding Ergic2 ERGIC and golgi 2 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); craniolenticulosutural dysplasia (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) NW_004955505 5548588 5583503 + 102015131 AGCD01065152;GBDF01112264;XM_005407138;XM_005407139;XM_005407140;XM_013505937;XM_013505938 XP_005407195;XP_005407196;XP_005407197;XP_013361391;XP_013361392 MODEL 39133382 snrna U4 U4 spliceosomal RNA 8971050 protein-coding Rtkn2 rhotekin 2 INVOLVED IN adaptive immune response (ortholog); hemopoiesis (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955425 15484287 15563535 - 102020354 AGCD01025582;AGCD01025583;AGCD01025584;AGCD01025585;AGCD01025586;GBDF01039332;XM_005385949;XM_005385950;XM_013514864 XP_005386006;XP_005386007;XP_013370318 MODEL 8794510 ncrna LOC102003217 uncharacterized LOC102003217 NW_004955410 22917245 22920183 + 102003217 AGCD01011087;GBDF01124788;XR_259857 MODEL 39133363 snorna SNORD99 Small nucleolar RNA SNORD99 8861142 pseudo LOC102019961 60S ribosomal protein L6 pseudogene NW_004955440 18587382 18588882 + 102019961 AGCD01036614 MODEL 9058565 protein-coding Trib2 tribbles pseudokinase 2 ENCODES a protein that exhibits nucleotide binding (ortholog); protein kinase activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of fat cell differentiation (ortholog); negative regulation of interleukin-10 production (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH melanoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955487 6889571 6915068 + 102008735 AGCD01059386;GBCE01170233;XM_005404436;XM_013504382;XM_013504383 XP_005404493;XP_013359836;XP_013359837 MODEL 8717294 ncrna LOC102013421 uncharacterized LOC102013421 NW_004955487 9461547 9465656 - 102013421 AGCD01059459;XR_263994 MODEL 39133090 snorna SNORD116 Small nucleolar RNA SNORD116 8843816 protein-coding LOC102011853 uncharacterized LOC102011853 NW_004955466 8078031 8135745 + 102011853 AGCD01050979;GBDJ01302620;XM_005399163;XM_005399164;XM_013521878 XP_005399220;XP_005399221;XP_013377332 MODEL 8774746 protein-coding Polrmt RNA polymerase mitochondrial ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); DNA-directed RNA polymerase activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN mitochondrial transcription (ortholog); transcription initiation at mitochondrial promoter (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alpers-Huttenlocher syndrome (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955495 7111271 7124005 + 102022939 AGCD01062119;GBDJ01389358;XM_005406033 XP_005406090 MODEL 8982355 protein-coding LOC102009047 protein FAM122A-like NW_004955415 23111023 23111850 + 102009047 AGCD01016551;XM_013512167 XP_013367621 MODEL 8701061 protein-coding LOC102011427 chromosome unknown open reading frame, human C19orf12 INVOLVED IN apoptotic process (ortholog); autophagy (ortholog); lipid metabolic process (ortholog); ASSOCIATED WITH Ataxia (ortholog); Cognitive Dysfunction (ortholog); Developmental Disabilities (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) NW_004955468 7903438 7914038 + 102011427 AGCD01052015;AGCD01052016;GBCB01022853;XM_005400110 XP_005400167 MODEL 8795371 protein-coding Slc39a4 solute carrier family 39 member 4 ENCODES a protein that exhibits identical protein binding (ortholog); metal ion binding (ortholog); zinc ion binding (ortholog); INVOLVED IN cellular response to zinc ion starvation (ortholog); intracellular zinc ion homeostasis (ortholog); zinc ion transmembrane transport (ortholog); ASSOCIATED WITH acrodermatitis (ortholog); acrodermatitis enteropathica (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasmic vesicle (ortholog); endosome (ortholog) NW_004955454 3041316 3047419 - 102005106 AGCD01045048;AGCD01045049;GBDK01284146;XM_005395883 XP_005395940 MODEL 9019949 protein-coding Ppp2r2b protein phosphatase 2 regulatory subunit Bbeta ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN mitochondrial fission (ortholog); mitochondrial fragmentation involved in apoptotic process (ortholog); neuron differentiation (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain disease (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955415 7054296 7510179 + 102013283 AGCD01016035;AGCD01016036;AGCD01016037;AGCD01016038;AGCD01016039;AGCD01016040;AGCD01016041;AGCD01016042;AGCD01016043;AGCD01016044;GBDF01195584;XM_005380663;XM_005380664;XM_005380665;XM_013512388 XP_005380720;XP_005380721;XP_005380722;XP_013367842 MODEL 9009185 protein-coding LOC102022512 EKC/KEOPS complex subunit LAGE3-like NW_004955498 2623974 2625284 + 102022512 AGCD01062813;GBDF01081721;XM_005406401 XP_005406458 MODEL 8788402 protein-coding LOC102010238 olfactory receptor 151 NW_004955412 25594862 25595791 + 102010238 AGCD01013161;XM_005378427 XP_005378484 MODEL 9042486 protein-coding Phtf1 putative homeodomain transcription factor 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cis-Golgi network membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955435 16972120 17025861 - 102011904 AGCD01033343;GBDK01026270;XM_005388977;XM_005388978;XM_005388979;XM_013516424;XR_001234855;XR_001234856 XP_005389034;XP_005389035;XP_005389036;XP_013371878 MODEL 8876997 protein-coding Spmip1 sperm microtubule inner protein 1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog) NW_004955479 9667771 9670258 + 102005375 AGCD01056486;GBDK01149250;XM_005402397;XM_013503275 XP_005402454;XP_013358729 MODEL 8853681 protein-coding LOC102016479 histone H4 NW_004955483 808848 811799 - 102016479 AGCD01057632;GBDJ01338008;XM_005403295 XP_005403352 MODEL 8811103 ncrna LOC102006378 uncharacterized LOC102006378 NW_004955431 11018368 11079905 + 102006378 AGCD01030216;AGCD01030217;AGCD01030218;AGCD01030219;AGCD01030220;AGCD01030221;AGCD01030222;AGCD01030223;GBDF01303264;XR_001234572;XR_261463 MODEL 8760228 protein-coding Rpl37 ribosomal protein L37 ENCODES a protein that exhibits MDM2/MDM4 family protein binding (ortholog); structural constituent of ribosome (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN cytoplasmic translation (ortholog); positive regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH colorectal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) NW_004955426 25120024 25122559 - 102025926 AGCD01026702;GBDJ01023269;XM_005415269 XP_005415326 MODEL 8771502 protein-coding Lrch4 leucine rich repeats and calponin homology domain containing 4 INVOLVED IN membrane raft assembly (ortholog); positive regulation of toll-like receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog); PML body (ortholog) NW_004955573 315764 327833 + 102019449 AGCD01074974;GBDF01131942;XM_005413713;XM_005413714 XP_005413770;XP_005413771 MODEL 8729739 protein-coding Reep1 receptor accessory protein 1 ENCODES a protein that exhibits microtubule binding (ortholog); olfactory receptor binding (ortholog); INVOLVED IN endoplasmic reticulum tubular network organization (ortholog); protein insertion into membrane (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal dominant distal hereditary motor neuronopathy 12 (ortholog); autosomal dominant distal hereditary motor neuronopathy 5 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955424 1369490 1425611 + 102018107 AGCD01024237;GBCE01013291;XM_013514719 XP_013370173 MODEL 8723956 pseudo LOC102007523 NEDD8-conjugating enzyme Ubc12 pseudogene NW_004955409 21637990 21714722 + 102007523 AGCD01009975;AGCD01009976;AGCD01009977;AGCD01009978;XM_005377162 MODEL 9029789 protein-coding Rhoxf1 Rhox homeobox family member 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); positive regulation of gene expression (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955534 39060 39570 + 102005840 AGCD01070432;XM_005410424 XP_005410481 MODEL 8743547 protein-coding LOC102008662 uncharacterized LOC102008662 NW_004955538 2203100 2223177 - 102008662 AGCD01071109;GBDK01307063;XM_013507815;XM_013507816;XM_013507817 XP_013363269;XP_013363270;XP_013363271 MODEL 8875817 pseudo LOC102019621 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 pseudogene NW_004955504 420550 422042 - 102019621 AGCD01064819 MODEL 8919493 pseudo LOC102004978 DNA-directed RNA polymerases I, II, and III subunit RPABC4 pseudogene NW_004955547 2461150 2462490 - 102004978 AGCD01072282 MODEL 8793245 protein-coding Rnf169 ring finger protein 169 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); nucleosome binding (ortholog); ubiquitin-modified histone reader activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); negative regulation of double-strand break repair (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN chromosome (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955414 16899101 16962690 - 102016373 AGCD01015227;AGCD01015228;AGCD01015229;AGCD01015230;AGCD01015231;GBBH01158619;GBCQ01030560;XM_013511845 XP_013367299 MODEL 8946074 protein-coding Pls3 plastin 3 ENCODES a protein that exhibits structural constituent of presynaptic actin cytoskeleton (ortholog); INVOLVED IN bone development (ortholog); inner ear auditory receptor cell differentiation (ortholog); regulation of synaptic vesicle cycle (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH Anterior Diaphragmatic Hernia (ortholog); Bone Fractures (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuromuscular junction (ortholog) NW_004955490 125913 221152 - 102024576 AGCD01060059;AGCD01060060;AGCD01060061;GBCE01031000;XM_005404619;XM_013504543 XP_005404676;XP_013359997 MODEL 9019517 protein-coding Rasip1 Ras interacting protein 1 ENCODES a protein that exhibits GTPase binding (ortholog); protein homodimerization activity (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN angiogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); negative regulation of membrane permeability (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cell-cell junction (ortholog); protein-containing complex (ortholog) NW_004955559 1830574 1844107 + 102020728 AGCD01073672;AGCD01073673;AGCD01073674;AGCD01073675;GBBH01005709;GBDF01267130;XM_013508989 XP_013364443 MODEL 8742025 protein-coding LOC102005691 NKG2-D type II integral membrane protein ENCODES a protein that exhibits identical protein binding (ortholog); protein phosphatase binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN natural killer cell mediated cytotoxicity (ortholog); negative regulation of natural killer cell chemotaxis (ortholog); negative regulation of natural killer cell mediated cytotoxicity directed against tumor cell target (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955413 7489158 7503014 + 102005691 AGCD01013822;GBDK01000444;XM_013511691;XM_013511692;XR_260066 XP_013367145;XP_013367146 MODEL 8735729 pseudo LOC102009049 vascular endothelial zinc finger 1 pseudogene NW_004955476 8879444 8880316 - 102009049 AGCD01055375 MODEL 8796179 protein-coding Ptrh2 peptidyl-tRNA hydrolase 2 ENCODES a protein that exhibits peptidyl-tRNA hydrolase activity (ortholog); INVOLVED IN negative regulation of anoikis (ortholog); negative regulation of gene expression (ortholog); positive regulation of anoikis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); Infantile-Onset Multisystem Neurologic, Endocrine, and Pancreatic Disease (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955451 3370761 3375979 + 102013236 AGCD01043053;GBDF01192078;XM_005393981 XP_005394038 MODEL 39131764 snorna SNORA21 Small nucleolar RNA SNORA21 8995536 protein-coding Slc39a5 solute carrier family 39 member 5 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cellular response to zinc ion starvation (ortholog); eye development (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog) NW_004955458 3843492 3849794 + 102005568 AGCD01047351;GBDK01295504;XM_005397299;XM_005397300;XM_005397301 XP_005397356;XP_005397357;XP_005397358 MODEL 9020114 protein-coding Sh2d1a SH2 domain containing 1A ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN humoral immune response (ortholog); natural killer cell activation (ortholog); negative regulation of T cell receptor signaling pathway (ortholog); ASSOCIATED WITH Burkitt lymphoma (ortholog); cerebral infarction (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955473 10345407 10370535 - 102017976 AGCD01054093;AGCD01054094;GBCE01037166;XM_005401276 XP_005401333 MODEL 8792509 pseudo LOC102018445 heparan sulfate 2-O-sulfotransferase 1 pseudogene NW_004955569 1146936 1151749 + 102018445 AGCD01074643 MODEL 39132619 snorna SNORA70 Small nucleolar RNA SNORA70 8864924 protein-coding Psmc1 proteasome 26S subunit, ATPase 1 ENCODES a protein that exhibits TBP-class protein binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); proteasome accessory complex (ortholog) NW_004955438 12705328 12721050 + 102012685 AGCD01035267;GBDF01004856;XM_005390281 XP_005390338 MODEL 9024014 protein-coding Phtf2 putative homeodomain transcription factor 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955410 7344526 7442802 - 102009585 AGCD01010712;AGCD01010713;AGCD01010714;GBCB01020131;XM_005377206;XM_005377207;XM_005377208;XM_005377209;XM_013510512 XP_005377263;XP_005377264;XP_005377265;XP_005377266;XP_013365966 MODEL 8784137 protein-coding Tlr2 toll like receptor 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); diacyl lipopeptide binding (ortholog); identical protein binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); cell surface pattern recognition receptor signaling pathway (ortholog); cellular response to bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); acne (ortholog); acute kidney failure (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog); cell surface (ortholog) NW_004955471 8011710 8019063 + 102006336 AGCD01053173;AGCD01053174;GBDF01040609;XM_005400927;XM_013522906 XP_005400984;XP_013378360 MODEL 8994969 ncrna LOC102011013 uncharacterized LOC102011013 NW_004955487 9073542 9074205 + 102011013 AGCD01059449;AGCD01059450;GBDF01127916;XR_263991 MODEL 8787852 ncrna LOC102013431 uncharacterized LOC102013431 NW_004955504 2733042 2738476 - 102013431 AGCD01064859;AGCD01064860;GBDF01281745;XR_264289 MODEL 8888669 trna trnD(gtc) tRNA-Asp MT 6950 7017 + 15822226 730468976 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 8970130 protein-coding Pkp4 plakophilin 4 INVOLVED IN cell-cell junction assembly (ortholog); positive regulation of cytokinesis (ortholog); regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell junction (ortholog); cell-cell contact zone (ortholog); cell-cell junction (ortholog) NW_004955449 14835423 15050237 - 102009238 AGCD01042179;AGCD01042180;GBCE01076404;GBDJ01140016;XM_005393383;XM_005393387;XM_013518709;XM_013518710;XM_013518711;XM_013518712;XM_013518713;XM_013518714 XP_005393440;XP_005393444;XP_013374163;XP_013374164;XP_013374165;XP_013374166;XP_013374167;XP_013374168 MODEL 8717993 protein-coding Rtl1 retrotransposon Gag like 1 INVOLVED IN angiogenesis (ortholog); embryonic placenta development (ortholog); gene expression (ortholog); FOUND IN Z disc (ortholog) NW_004955538 177078 181557 - 102020050 AGCD01070991;XM_005410721 XP_005410778 MODEL 8845505 protein-coding Senp8 SUMO peptidase family member, NEDD8 specific ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955450 4978767 5001678 - 102005759 AGCD01042487;AGCD01042488;GBDF01278519;XM_005393625 XP_005393682 MODEL 8861444 ncrna LOC102008279 uncharacterized LOC102008279 NW_004955450 14296448 14299942 - 102008279 AGCD01042742;GBDF01052413;XR_001235869;XR_001235870 MODEL 39132951 snrna U2 U2 spliceosomal RNA 8835267 protein-coding LOC102008663 butyrophilin subfamily 3 member A1-like NW_004955437 1060528 1076067 + 102008663 AGCD01034189;XM_013516725 XP_013372179 MODEL 8745834 protein-coding Sox12 SRY-box transcription factor 12 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of regulatory T cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); spinal cord development (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-DNA complex (ortholog) NW_004955597 225796 229350 + 102026174 AGCD01076548;GBCB01087162;XM_013510026 XP_013365480 MODEL 8881740 protein-coding Prok2 prokineticin 2 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); chemotaxis (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); cervical cancer (ortholog) NW_004955421 16325519 16339458 + 102030322 AGCD01021998;GBDK01269636;XM_005383770;XM_005383771 XP_005383827;XP_005383828 MODEL 8942983 pseudo LOC102010239 mortality factor 4-like protein 1 pseudogene NW_004955412 28163408 28164375 + 102010239 AGCD01013249 MODEL 730469011 snorna SNORND104 Small nucleolar RNA SNORD104 8850755 protein-coding Ergic3 ERGIC and golgi 3 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Developmental Disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) NW_004955422 25884138 25893237 - 102010597 AGCD01023269;GBDF01008497;XM_005384790;XM_005384791 XP_005384847;XP_005384848 MODEL 730469115 snorna SNORA21 Small nucleolar RNA SNORA21 8865728 protein-coding Ssbp1 single stranded DNA binding protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN mitochondrial DNA replication (ortholog); mitochondrion organization (ortholog); positive regulation of mitochondrial DNA replication (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); cervical cancer (ortholog); fundus dystrophy (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955494 1807885 1826375 - 102013623 AGCD01061424;GBCE01077691;XM_005405404;XM_013505023 XP_005405461;XP_013360477 MODEL 39132939 snorna SNORD11B Small nucleolar RNA SNORD11B 8824140 protein-coding Sh2d1b SH2 domain containing 1B INVOLVED IN negative regulation of natural killer cell mediated cytotoxicity (ortholog); positive regulation of natural killer cell mediated cytotoxicity (ortholog); regulation of natural killer cell activation (ortholog); ASSOCIATED WITH sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog) NW_004955462 13909266 13934239 + 102013590 AGCD01049435;GBDK01188618;XM_005398275;XR_001236587 XP_005398332 MODEL 8787014 ncrna LOC102007524 uncharacterized LOC102007524 NW_004955462 7283476 7285145 - 102007524 AGCD01049299;GBDF01181580;XR_263102 MODEL 8967454 ncrna LOC102011431 uncharacterized LOC102011431 NW_004955414 6656760 6678985 + 102011431 AGCD01014926;GBBH01097014;XR_001233094;XR_001233095;XR_001233097;XR_260157 MODEL 8945436 protein-coding Reep2 receptor accessory protein 2 ENCODES a protein that exhibits taste receptor binding (ortholog); INVOLVED IN endoplasmic reticulum tubular network organization (ortholog); protein transport into membrane raft (ortholog); sensory perception of bitter taste (ortholog); ASSOCIATED WITH cerebral palsy (ortholog); genetic disease (ortholog); hereditary spastic paraplegia 5A (ortholog); FOUND IN cytoplasmic microtubule (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955418 2018891 2024545 - 102026866 AGCD01018739;GBCE01152326;XM_005382101;XM_005382102;XM_005382103 XP_005382158;XP_005382159;XP_005382160 MODEL 8815794 protein-coding Wdr91 WD repeat domain 91 ENCODES a protein that exhibits phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); regulation of protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); endosome membrane (ortholog) NW_004955494 7441880 7470174 + 102013426 AGCD01061552;GBDF01015655;XM_005405487;XM_005405488 XP_005405544;XP_005405545 MODEL 8999277 protein-coding Rhpn1 rhophilin Rho GTPase binding protein 1 INVOLVED IN focal adhesion assembly (ortholog); glomerular filtration (ortholog); kidney development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cell periphery (ortholog); plasma membrane (ortholog) NW_004955454 2086054 2099018 + 102029823 AGCD01045009;GBDF01155289;XM_005395768 XP_005395825 MODEL 9040341 protein-coding C7 complement C7 ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); intracellular sodium ion homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) NW_004955426 25173463 25230897 + 102012222 AGCD01026705;AGCD01026706;AGCD01026707;AGCD01026708;AGCD01026709;XM_013514936 XP_013370390 MODEL 8837504 pseudo LOC102012245 eukaryotic translation initiation factor 5 pseudogene NW_004955542 1250369 1252115 - 102012245 AGCD01071498 MODEL 9066884 pseudo LOC102004979 survival of motor neuron-related-splicing factor 30 pseudogene NW_004955548 1417585 1418300 - 102004979 AGCD01072375 MODEL 8964855 protein-coding Ppp2r2c protein phosphatase 2 regulatory subunit Bgamma ASSOCIATED WITH Breast Cancer, Familial (ortholog); Emphysema (ortholog); esophageal cancer (ortholog) NW_004955514 3863461 3893026 + 102009975 AGCD01067119;GBDF01253553;XM_005408859 XP_005408916 MODEL 39133383 snrna U4 U4 spliceosomal RNA 8899797 protein-coding Rnf17 ring finger protein 17 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN spermatid development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955497 282559 429999 + 102004948 AGCD01062405;AGCD01062406;AGCD01062407;AGCD01062408;AGCD01062409;AGCD01062410;AGCD01062411;GBDF01004700;XM_013505510;XM_013505511;XM_013505512;XM_013505513;XM_013505514 XP_013360964;XP_013360965;XP_013360966;XP_013360967;XP_013360968 MODEL 8748109 protein-coding LOC102003218 dimethylaniline monooxygenase [N-oxide-forming] 5-like NW_004955462 10184547 10214181 - 102003218 AGCD01049355;AGCD01049356;AGCD01049357;XM_005398324 XP_005398381 MODEL 8842428 protein-coding Sephs1 selenophosphate synthetase 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); L-selenocysteine biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); nuclear membrane (ortholog) NW_004955429 20849526 20871074 + 102011347 AGCD01028991;GBDK01092936;XM_005387165;XM_005387168 XP_005387222;XP_005387225 MODEL 8834295 protein-coding LOC102006032 ankyrin repeat and KH domain-containing protein 1 NW_004955418 134451 259259 - 102006032 AGCD01018668;AGCD01018669;AGCD01018670;GBDI01137461;XM_005382032;XM_005382034;XM_005382037;XM_013512890;XM_013512892;XM_013512893;XM_013512894;XM_013512895;XM_013512896;XM_013512897 XP_005382089;XP_005382091;XP_005382094;XP_013368344;XP_013368346;XP_013368347;XP_013368348;XP_013368349;XP_013368350;XP_013368351 MODEL 8708959 pseudo LOC102004256 archaemetzincin-2-like NW_004955463 752523 753108 + 102004256 AGCD01049497 MODEL 8991492 pseudo LOC102006382 non-histone chromosomal protein HMG-14 pseudogene NW_004955515 1139391 1139869 - 102006382 AGCD01067220 MODEL 8751816 protein-coding LOC102016481 arylacetamide deacetylase-like 4 NW_004955486 669925 732562 - 102016481 AGCD01058864;AGCD01058865;AGCD01058866;AGCD01058867;AGCD01058868;AGCD01058869;AGCD01058870;AGCD01058871;AGCD01058872;AGCD01058873;AGCD01058874;AGCD01058875;XM_005415332 XP_005415389 MODEL 8936915 protein-coding Pom121l12 POM121 transmembrane nucleoporin like 12 NW_004955465 8249402 8251149 + 102007750 AGCD01050471;GBDF01221912;XM_005398875 XP_005398932 MODEL 8935425 protein-coding Trib3 tribbles pseudokinase 3 ENCODES a protein that exhibits enzyme binding (ortholog); kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955597 259209 265896 + 102020072 AGCD01076551;AGCD01076552;GBBH01224966;XM_005414716 XP_005414773 MODEL 8921319 protein-coding LOC102011861 vomeronasal type-1 receptor 90-like NW_004955414 14978145 14979125 - 102011861 AGCD01015166;XM_005380440 XP_005380497 MODEL 39132610 snorna SNORA70 Small nucleolar RNA SNORA70 9011843 protein-coding Psmc2 proteasome 26S subunit, ATPase 2 ENCODES a protein that exhibits general transcription initiation factor binding (ortholog); proteasome-activating activity (ortholog); TBP-class protein binding (ortholog); INVOLVED IN ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) NW_004955410 8341218 8355515 + 102016988 AGCD01010744;GBDF01009573;XM_005377230 XP_005377287 MODEL 9064773 protein-coding Tlr3 toll like receptor 3 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); identical protein binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN cellular response to exogenous dsRNA (ortholog); cellular response to interferon-beta (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); alcohol dependence (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); early endosome (ortholog) NW_004955403 22977882 23001392 - 102019229 AGCD01002237;AGCD01002238;GBDK01060740;XM_005373437;XM_005373438;XM_005373439;XM_005373440;XM_013512872 XP_005373494;XP_005373495;XP_005373496;XP_005373497;XP_013368326 MODEL 730468989 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 8909123 protein-coding LOC102019962 protein FRG1 NW_004955552 1563891 1589239 + 102019962 AGCD01072778;AGCD01072779;GBCE01026674;XM_013508607 XP_013364061 MODEL 8890208 protein-coding Ptrhd1 peptidyl-tRNA hydrolase domain containing 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); intellectual disability (ortholog); FOUND IN mitochondrion (ortholog) NW_004955469 6909627 6913411 - 102030622 AGCD01052399;GBCQ01099830;XM_005400397 XP_005400454 MODEL 8867331 protein-coding Plscr1 phospholipid scramblase 1 ENCODES a protein that exhibits calcium ion binding (ortholog); CD4 receptor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN acute-phase response (ortholog); apoptotic process (ortholog); cellular response to cytokine stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955474 10953381 10989100 + 102017977 AGCD01054604;AGCD01054605;GBCQ01123186;XM_005401430;XM_005401431;XM_005401432;XM_013502784 XP_005401487;XP_005401488;XP_005401489;XP_013358238 MODEL 8742100 pseudo LOC102009053 ribosome biogenesis protein BRX1 homolog pseudogene NW_004955416 27989601 28018980 - 102009053 AGCD01017623;XM_005381644;XR_260424;XR_260425;XR_260426;XR_260427;XR_260428 MODEL 8790503 protein-coding LOC102008665 dnaJ homolog subfamily B member 6-like NW_004955438 5105330 5113520 - 102008665 AGCD01035057;GBDF01094584;GBDF01237045;XM_013517150 XP_013372604 MODEL 8906918 protein-coding LOC102005692 myosin-8 NW_004955467 6760351 6787249 + 102005692 AGCD01051422;AGCD01051423;GBBH01072423;GBCB01079090;XM_013522113 XP_013377567 MODEL 8816049 protein-coding Rpl37a ribosomal protein L37a ENCODES a protein that exhibits large ribosomal subunit rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) NW_004955453 16711597 16715253 - 102022780 AGCD01044909;AGCD01044910;GBDK01000039;XM_005395684 XP_005395741 MODEL 9045366 ncrna LOC102018451 uncharacterized LOC102018451 NW_004955402 60136650 60151376 + 102018451 AGCD01001579;AGCD01001580;XR_259112 MODEL 8909158 protein-coding Lrcol1 leucine rich colipase like 1 ASSOCIATED WITH cervical cancer (ortholog) NW_004955482 429882 431693 + 102021660 AGCD01057172;GBDF01213728;XM_005402958 XP_005403015 MODEL 8934636 protein-coding Phyh phytanoyl-CoA 2-hydroxylase ENCODES a protein that exhibits carboxylic acid binding (ortholog); catalytic activity (ortholog); ferrous iron binding (ortholog); INVOLVED IN 2-oxobutyrate catabolic process (ortholog); 2-oxoglutarate metabolic process (ortholog); fatty acid alpha-oxidation (ortholog); PARTICIPATES IN phytanic acid degradation pathway; Refsum disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Adult Refsum Disease, 1 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); peroxisome (ortholog) NW_004955462 1238622 1250731 - 102011630 AGCD01049103;GBCB01113496;GBDJ01135425;XM_005398098 XP_005398155 MODEL 8845134 protein-coding LOC102019623 olfactory receptor 8K5-like NW_004955511 1421949 1422887 + 102019623 AGCD01066366;XM_013506424 XP_013361878 MODEL 10213477 ncrna LOC106147504 uncharacterized LOC106147504 NW_004955570 1497324 1502789 - 106147504 AGCD01074815;GBDF01126186;XR_001232431 MODEL 8770373 protein-coding LOC102013433 ras-related protein Rab-7a-like NW_004955429 13690345 13691311 - 102013433 AGCD01028762;GBDI01000890;XM_013515500 XP_013370954 MODEL 8960601 pseudo LOC102011014 60S ribosomal protein L32 pseudogene NW_004955422 28865640 28866566 + 102011014 AGCD01023372 MODEL 9010182 trna trnE(ttc) tRNA-Glu MT 14092 14160 - 15822214 8904755 protein-coding LOC102022513 melanoma-associated antigen 10-like NW_004955498 4139854 4140936 - 102022513 AGCD01062973;XM_013505525 XP_013360979 MODEL 8887928 pseudo LOC102007526 actin-related protein 10 pseudogene NW_004955463 6222350 6224556 + 102007526 AGCD01049659 MODEL 39132566 snrna U2 U2 spliceosomal RNA 8775547 protein-coding Rasl10a RAS like family 10 member A NW_004955455 3618656 3621299 - 102005224 AGCD01045640;AGCD01045641;GBDF01268764;XM_005396200 XP_005396257 MODEL 8896792 protein-coding Reep3 receptor accessory protein 3 INVOLVED IN mitotic nuclear membrane reassembly (ortholog); nuclear envelope organization (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955425 16633900 16689549 + 102026234 AGCD01025615;AGCD01025616;AGCD01025617;GBDJ01126439;XM_013514852;XM_013514853;XM_013514854 XP_013370306;XP_013370307;XP_013370308 MODEL 9042515 protein-coding LOC102012249 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955546 2009351 2010344 + 102012249 AGCD01072081;XM_013508417 XP_013363871 MODEL 8736946 protein-coding Prokr1 prokineticin receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); Hyperalgesia (ortholog); long QT syndrome (ortholog) NW_004955424 16287666 16301713 - 102020460 AGCD01024738;GBDJ01323907;XM_005385662 XP_005385719 MODEL 150537115 snorna SNORND104 Small nucleolar RNA SNORD104 8938044 ncrna LOC102006033 uncharacterized LOC102006033 NW_004955481 9531180 9539647 + 102006033 AGCD01057102;GBDF01031476;XR_263796 MODEL 8815710 protein-coding Rnf170 ring finger protein 170 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN adult walking behavior (ortholog); gene expression (ortholog); innate immune response (ortholog); ASSOCIATED WITH autosomal dominant sensory ataxia 1 (ortholog); cervical cancer (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955457 13093914 13148800 - 102012285 AGCD01047037;AGCD01047038;GBCE01104280;GBCQ01155545;XM_005397069 XP_005397126 MODEL 8765759 protein-coding Sephs2 selenophosphate synthetase 2 ENCODES a protein that exhibits selenide, water dikinase activity (ortholog); INVOLVED IN L-selenocysteine biosynthetic process (ortholog); selenium compound metabolic process (ortholog); PARTICIPATES IN selenoamino acid metabolic pathway; ASSOCIATED WITH colorectal adenoma (ortholog); colorectal carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955493 7370869 7373121 - 102014913 AGCD01061184;GBBH01065362;XM_005415295 XP_005415352 MODEL 150537104 snorna SNORD12 Small nucleolar SNORD12/SNORD106 8970278 protein-coding Tril TLR4 interactor with leucine rich repeats ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN regulation of cytokine production involved in immune response (ortholog); toll-like receptor 4 signaling pathway (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN lipopolysaccharide receptor complex (ortholog) NW_004955410 30497953 30503444 - 102015485 AGCD01011308;GBDK01079499;XM_005377483 XP_005377540 MODEL 8704248 protein-coding Ssbp2 single stranded DNA binding protein 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955418 28562735 28813541 + 102005473 AGCD01019442;AGCD01019443;AGCD01019444;AGCD01019445;GBDF01111104;XM_013512973 XP_013368427 MODEL 8769222 protein-coding Pla1a phospholipase A1 member A ENCODES a protein that exhibits glycerophospholipid phospholipase A1 activity (ortholog); phosphatidylserine lysophospholipase A1 activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN acrosomal membrane (ortholog); extracellular region (ortholog) NW_004955427 19298004 19334454 + 102020033 AGCD01027365;GBDJ01230379;XM_005386450;XM_005386451 XP_005386507;XP_005386508 MODEL 8840693 protein-coding Sh2d2a SH2 domain containing 2A INVOLVED IN cell population proliferation (ortholog); PARTICIPATES IN Erk5 MAPK signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955545 2881954 2891021 - 102010633 AGCD01071927;GBBH01050829;XM_005411705;XM_005411707;XM_005411708;XM_005411709;XM_005411712;XM_013508210 XP_005411762;XP_005411764;XP_005411765;XP_005411766;XP_005411769;XP_013363664 MODEL 9045170 protein-coding LOC102008284 protocadherin gamma-B7-like NW_004957427 6 1475 - 102008284 AGCD01080823;GBDF01178990;XM_005415230 XP_005415287 MODEL 9054308 protein-coding LOC102011862 uncharacterized LOC102011862 NW_004955474 8241162 8246129 - 102011862 AGCD01054547;GBDF01264907;XM_013502768 XP_013358222 MODEL 8966236 ncrna LOC102019625 uncharacterized LOC102019625 NW_004955431 15052267 15054709 + 102019625 AGCD01030345;GBDF01291829;XR_001234581;XR_261475 MODEL 8864349 protein-coding Rhpn2 rhophilin Rho GTPase binding protein 2 INVOLVED IN glomerular filtration (ortholog); negative regulation of stress fiber assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955468 4932437 4976584 + 102022907 AGCD01051930;GBCQ01096955;GBDF01303848;XM_013522388 XP_013377842 MODEL 9014452 protein-coding Psmc3 proteasome 26S subunit, ATPase 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blastocyst development (ortholog); host-mediated perturbation of viral transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); DEAFNESS, CATARACT, IMPAIRED INTELLECTUAL DEVELOPMENT, AND POLYNEUROPATHY (ortholog); FOUND IN nucleus (ortholog); P-body (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955422 837934 843161 + 102021984 AGCD01022437;GBDF01010552;XM_005383972 XP_005384029 MODEL 9041705 ncrna LOC102010245 uncharacterized LOC102010245 NW_004955468 7542624 7555442 + 102010245 AGCD01052002;GBDF01145028;XR_263402 MODEL 8847762 protein-coding Wdr93 WD repeat domain 93 ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955416 15472866 15527853 - 102026636 AGCD01017332;AGCD01017333;AGCD01017334;AGCD01017335;GBDF01045871;XM_005381546;XM_005381547;XM_013512549;XM_013512550 XP_005381603;XP_005381604;XP_013368003;XP_013368004 MODEL 9019408 protein-coding Sox13 SRY-box transcription factor 13 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN gamma-delta T cell differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955406 39959458 39994214 + 102016667 AGCD01006649;AGCD01006650;GBCE01186528;XM_005375280;XM_005375281;XM_013522670 XP_005375337;XP_005375338;XP_013378124 MODEL 8891858 protein-coding Rtl4 retrotransposon Gag like 4 INVOLVED IN cognition (ortholog); norepinephrine metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955490 3403958 3497789 - 102029300 AGCD01060166;AGCD01060167;AGCD01060168;GBDF01086720;XM_013504514 XP_013359968 MODEL 39133385 snrna U4 U4 spliceosomal RNA 8922411 pseudo LOC102003219 calcyclin-binding protein pseudogene NW_004955411 30807769 30808487 + 102003219 AGCD01012264 MODEL 8707504 protein-coding C8a complement C8 alpha chain ENCODES a protein that exhibits complement binding (ortholog); protein-containing complex binding (ortholog); wide pore channel activity (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); killing of cells of another organism (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) NW_004955464 2806859 2874444 - 102023240 AGCD01049965;AGCD01049966;XM_005398770 XP_005398827 MODEL 9064179 protein-coding Pts 6-pyruvoyltetrahydropterin synthase ENCODES a protein that exhibits 6-pyruvoyltetrahydropterin synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN tetrahydrobiopterin biosynthetic process (ortholog); tetrahydrobiopterin metabolic process (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; Segawa syndrome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); BH4-deficient hyperphenylalaninemia A (ortholog); BH4-deficient hyperphenylalaninemia B (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955412 13880937 13888562 + 102030166 AGCD01012846;AGCD01012847;GBDJ01399101;XM_005378120 XP_005378177 MODEL 8706693 protein-coding Plscr3 phospholipid scramblase 3 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); lead ion binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to lipopolysaccharide (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); obesity (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955467 9534462 9539738 + 102016998 AGCD01051516;GBDI01305134;XM_005399507;XM_013522122 XP_005399564;XP_013377576 MODEL 730468970 snorna SNORA22 Small nucleolar RNA SNORA22 8997258 pseudo LOC102008668 protein S100-A10 pseudogene NW_004955547 477402 477949 + 102008668 AGCD01072162;XM_005411852 MODEL 8823825 pseudo LOC102004258 protein tyrosine phosphatase type IVA 1 pseudogene NW_004955464 8933302 8933760 - 102004258 AGCD01050099 MODEL 8760612 protein-coding LOC102018453 protocadherin alpha-11 NW_004955611 320712 330219 - 102018453 AGCD01077161;AGCD01077162;AGCD01077163;XM_005414947 XP_005415004 MODEL 8958384 protein-coding Pom121l2 POM121 transmembrane nucleoporin like 2 NW_004955465 13175383 13178722 - 102003954 AGCD01050591;GBDF01007095;XM_005399007 XP_005399064 MODEL 8845871 protein-coding Spmip10 sperm microtubule inner protein 10 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); uterine carcinosarcoma (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); sperm flagellum (ortholog) NW_004955521 4444948 4448702 + 102019630 AGCD01068262;GBDF01004269;XM_005409330 XP_005409387 MODEL 8959254 protein-coding Slc39a6 solute carrier family 39 member 6 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); intracellular zinc ion homeostasis (ortholog); lymphocyte activation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); endoplasmic reticulum (ortholog); lamellipodium membrane (ortholog) NW_004955402 22670598 22698455 - 102008795 AGCD01000608;GBDF01192816;XM_005372806 XP_005372863 MODEL 8993240 protein-coding LOC102004982 uncharacterized LOC102004982 NW_004955558 812403 851364 - 102004982 AGCD01073392;AGCD01073393;AGCD01073394;GBDF01050328;XM_013508873;XM_013508874;XM_013508875;XM_013508876;XM_013508877;XM_013508878;XM_013508879;XM_013508880;XR_001232320;XR_001232321;XR_001232322;XR_001232323 XP_013364327;XP_013364328;XP_013364329;XP_013364330;XP_013364331;XP_013364332;XP_013364333;XP_013364334 MODEL 8811856 trna trnF(gaa) tRNA-Phe MT 1 66 + 15822237 730469051 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 8893967 pseudo LOC102019626 vesicle transport through interaction with t-SNAREs homolog 1B pseudogene NW_004955513 712796 713445 - 102019626 AGCD01066830 MODEL 8888329 protein-coding LOC102019963 uncharacterized protein C12orf45-like NW_004955442 13763036 13765604 - 102019963 AGCD01037787;GBDF01105623;XM_005391324;XM_005391325;XM_013517635 XP_005391381;XP_005391382;XP_013373089 MODEL 8730835 pseudo LOC102012250 bromodomain-containing protein 7-like NW_004955441 5921864 5922609 - 102012250 AGCD01036892 MODEL 8817191 pseudo LOC102006386 muskelin-like NW_004955526 3588762 3591143 - 102006386 AGCD01069337 MODEL 9060726 protein-coding LOC102009054 uncharacterized LOC102009054 NW_004955416 11049189 11057164 - 102009054 AGCD01017171;AGCD01017172;GBDF01186388;XM_005381692 XP_005381749 MODEL 8805325 protein-coding Wdr97 WD repeat domain 97 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955454 2769356 2778024 + 102023430 AGCD01045033;GBCB01051894;XM_005395848;XM_013520172;XM_013520173;XM_013520174;XM_013520175;XR_001236234 XP_005395905;XP_013375626;XP_013375627;XP_013375628;XP_013375629 MODEL 8750954 protein-coding Rpl38 ribosomal protein L38 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN 90S preribosome assembly (ortholog); axial mesoderm development (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955553 1129607 1133896 + 102005422 AGCD01072871;GBDF01008122;XM_005412223;XM_005412224;XM_013508666 XP_005412280;XP_005412281;XP_013364120 MODEL 8939475 pseudo LOC102011433 zinc finger protein 35-like NW_004955414 19831492 19837666 - 102011433 AGCD01015339 MODEL 8916445 protein-coding Lrfn1 leucine rich repeat and fibronectin type III domain containing 1 INVOLVED IN regulation of postsynaptic density assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cell surface (ortholog); postsynaptic density membrane (ortholog) NW_004955468 231164 240924 + 102025993 AGCD01051686;GBDI01025109;GBDJ01423007;XM_005399787 XP_005399844 MODEL 8773064 protein-coding Phyhd1 phytanoyl-CoA dioxygenase domain containing 1 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955570 1298243 1308230 + 102012377 AGCD01074807;AGCD01074808;GBCB01020010;XM_013509414;XM_013509415 XP_013364868;XP_013364869 MODEL 8877656 protein-coding Pomc proopiomelanocortin ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); hormone activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); cell-cell signaling (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; altered energy homeostasis pathway; altered melanocortin system pathway; ASSOCIATED WITH ACTH Syndrome, Ectopic (ortholog); acute kidney failure (ortholog); acute kidney tubular necrosis (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); neuronal cell body (ortholog) NW_004955469 7217233 7220401 - 102003750 AGCD01052411;GBDF01002960;XM_005400399;XM_013522557 XP_005400456;XP_013378011 MODEL 8909713 protein-coding LOC102013434 uncharacterized LOC102013434 NW_004955430 2174725 2183009 + 102013434 AGCD01029156;GBDK01214826;XM_005387309 XP_005387366 MODEL 8745120 ncrna LOC102022516 uncharacterized LOC102022516 NW_004955425 24875518 24899720 - 102022516 AGCD01025896;AGCD01025897;AGCD01025898;GBDF01146023;XR_261169 MODEL 8887450 protein-coding Sepsecs Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase ENCODES a protein that exhibits O-phosphoseryl-tRNA(Sec) selenium transferase activity (ortholog); tRNA binding (ortholog); INVOLVED IN conversion of seryl-tRNAsec to selenocys-tRNAsec (ortholog); selenium compound metabolic process (ortholog); selenocysteine incorporation (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Ataxia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955443 19759772 19859188 + 102022336 AGCD01038634;AGCD01038635;AGCD01038636;AGCD01038637;GBDF01087437;XM_005392040;XM_005392041;XM_005392042 XP_005392097;XP_005392098;XP_005392099 MODEL 9012315 protein-coding Tlr4 toll like receptor 4 ENCODES a protein that exhibits identical protein binding (ortholog); lipopolysaccharide binding (ortholog); lipopolysaccharide immune receptor activity (ortholog); INVOLVED IN activation of innate immune response (ortholog); astrocyte development (ortholog); B cell proliferation involved in immune response (ortholog); PARTICIPATES IN titanium dioxide nanoparticle response pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acanthamoeba Keratitis (ortholog); Acne Conglobata (ortholog); Acute Coronary Syndrome (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endosome membrane (ortholog) NW_004955419 10190937 10201896 - 102030080 AGCD01019939;GBBH01209662;XM_005382606 XP_005382663 MODEL 8729841 protein-coding Ppp2r2d protein phosphatase 2 regulatory subunit Bdelta ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); protein phosphatase regulator activity (ortholog); INVOLVED IN regulation of chromosome segregation (ortholog); FOUND IN cytoplasm (ortholog); protein phosphatase type 2A complex (ortholog) NW_004955477 9571974 9611076 + 102022283 AGCD01055677;GBDF01108912;XM_005402033;XM_005402034 XP_005402090;XP_005402091 MODEL 9000017 protein-coding Reep4 receptor accessory protein 4 INVOLVED IN mitotic nuclear membrane reassembly (ortholog); nuclear envelope organization (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955403 45627750 45631481 - 102003719 AGCD01002824;GBBH01051322;XM_005373648;XM_013513770 XP_005373705;XP_013369224 MODEL 8954381 pseudo LOC102011864 up-regulated during skeletal muscle growth protein 5 pseudogene NW_004955416 8440518 8440842 - 102011864 AGCD01017056;XM_005381302 MODEL 8855044 trna trnG(tcc) tRNA-Gly MT 9396 9464 + 15822209 9000065 pseudo LOC102005693 heterogeneous nuclear ribonucleoprotein A3 pseudogene NW_004955413 21622743 21623904 - 102005693 AGCD01014258 MODEL 8904931 protein-coding Sh2d3a SH2 domain containing 3A ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955495 2758214 2769867 + 102003978 AGCD01061799;GBDJ01075053;XM_005405690;XM_005405691;XM_005405692;XM_005405693;XM_005405694 XP_005405747;XP_005405748;XP_005405749;XP_005405750;XP_005405751 MODEL 8927590 protein-coding Sox14 SRY-box transcription factor 14 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN entrainment of circadian clock (ortholog); regulation of neuron migration (ortholog); visual perception (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955501 1155920 1157870 - 102016077 AGCD01064045;XM_005406773 XP_005406830 MODEL 39132601 snorna SNORA70 Small nucleolar RNA SNORA70 8818527 ncrna LOC102006036 uncharacterized LOC102006036 NW_004955421 23412284 23447843 + 102006036 AGCD01022183;GBCQ01089850;XR_001233831;XR_260822 MODEL 9031882 protein-coding LOC102019628 chromosome unknown open reading frame, human C17orf58 ASSOCIATED WITH cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955432 9347128 9347594 + 102019628 AGCD01030904;XM_013515911 XP_013371365 MODEL 10361305 protein-coding LOC106147505 neutrophil gelatinase-associated lipocalin-like NW_004955570 290848 294987 + 106147505 AGCD01081655;XM_013509379 XP_013364833 MODEL 39131792 snorna SNORD12 Small nucleolar SNORD12/SNORD106 9034545 protein-coding LOC102011016 guanylate-binding protein 4 NW_004955423 4931941 4946708 + 102011016 AGCD01023550;GBBH01026001;GBCQ01139851;XM_013514413 XP_013369867 MODEL 8707726 protein-coding Rnf175 ring finger protein 175 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955471 8019842 8079565 - 102006022 AGCD01053174;AGCD01053175;AGCD01053176;GBDF01194289;XM_005400926 XP_005400983 MODEL 39131949 snrna U2 U2 spliceosomal RNA 8814980 ncrna LOC102007527 uncharacterized LOC102007527 NW_004955465 7812882 7828643 - 102007527 AGCD01050469;GBDF01276911;XR_263251 MODEL 8983925 protein-coding LOC102012257 lipopolysaccharide-binding protein NW_004955445 18358717 18389491 - 102012257 AGCD01039903;AGCD01039904;GBDJ01074877;XM_005392536;XR_001235614;XR_001235615;XR_001235616;XR_001235617;XR_262356 XP_005392593 MODEL 9042372 pseudo LOC102004984 60S ribosomal protein L7 pseudogene NW_004955443 10336436 10337202 - 102004984 AGCD01038376 MODEL 8870073 protein-coding Slc39a7 solute carrier family 39 member 7 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN B cell differentiation (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); intracellular zinc ion homeostasis (ortholog); ASSOCIATED WITH agammaglobulinemia 9 (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955437 1774301 1778092 + 102027785 AGCD01034233;GBDF01119218;XM_005389473;XM_013516972 XP_005389530;XP_013372426 MODEL 8854809 protein-coding Rasl10b RAS like family 10 member B INVOLVED IN positive regulation of peptide hormone secretion (ortholog); regulation of systemic arterial blood pressure by atrial natriuretic peptide (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955481 10183635 10192155 + 102019805 AGCD01057138;GBCB01022088;GBCE01123565;XM_005402887 XP_005402944 MODEL 9060830 protein-coding Pla2g10 phospholipase A2 group X ENCODES a protein that exhibits 1-alkyl-2-acetylglycerophosphocholine esterase activity (ortholog); A2-type glycerophospholipase activity (ortholog); glycerophospholipase activity (ortholog); INVOLVED IN axon guidance (ortholog); cellular response to leukemia inhibitory factor (ortholog); cholesterol homeostasis (ortholog); FOUND IN acrosomal vesicle (ortholog); extracellular region (ortholog); lysosome (ortholog) NW_004955442 4208497 4225893 + 102015776 AGCD01037522;AGCD01037523;AGCD01037524;GBCE01002387;XM_005391132 XP_005391189 MODEL 8785809 protein-coding LOC102016482 E3 SUMO-protein ligase PIAS2-like NW_004955420 30189775 30195685 + 102016482 AGCD01021538;GBCB01120667;XM_013513632 XP_013369086 MODEL 8931408 ncrna LOC102003223 uncharacterized LOC102003223 NW_004955467 6583158 6595059 - 102003223 AGCD01051417;GBDI01181558;XR_001236858;XR_263342;XR_263343;XR_263344 MODEL 8800190 protein-coding Erh ERH mRNA splicing and mitosis factor ENCODES a protein that exhibits methyl-CpG binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); sarcoma (ortholog); FOUND IN methylosome (ortholog); midbody (ortholog); nucleus (ortholog) NW_004955466 960245 976449 + 102027958 AGCD01050685;AGCD01050686;GBBH01031291;XM_005399034 XP_005399091 MODEL 150537118 snorna SNORA23 Small nucleolar RNA SNORA23 8860404 protein-coding Reep5 receptor accessory protein 5 INVOLVED IN endoplasmic reticulum membrane organization (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network (ortholog) NW_004955418 2504028 2539574 + 102024676 AGCD01018771;AGCD01018772;GBDJ01073123;GBDK01008237;XM_005382341 XP_005382398 MODEL 9040249 pseudo LOC102008670 40S ribosomal protein S13 pseudogene NW_004955441 317788 319866 + 102008670 AGCD01036700 MODEL 8988531 protein-coding Plscr4 phospholipid scramblase 4 ENCODES a protein that exhibits CD4 receptor binding (ortholog); enzyme binding (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN calcium activated phosphatidylcholine scrambling (ortholog); calcium activated phosphatidylserine scrambling (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleus (ortholog); plasma membrane (ortholog) NW_004955474 11299390 11331982 + 102020330 AGCD01054617;AGCD01054618;GBBH01116620;GBDI01075931;XM_005401439 XP_005401496 MODEL 8702855 pseudo LOC102004259 phosphoacetylglucosamine mutase pseudogene NW_004955465 13182009 13183562 + 102004259 AGCD01050592 MODEL 8788450 protein-coding Trim10 tripartite motif containing 10 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); erythrocyte differentiation (ortholog); host-mediated suppression of symbiont invasion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955583 268856 277079 - 102012818 AGCD01075808;GBBH01166081;XM_005414300 XP_005414357 MODEL 8838854 protein-coding Lrfn2 leucine rich repeat and fibronectin type III domain containing 2 INVOLVED IN modulation of chemical synaptic transmission (ortholog); regulation of postsynapse organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); hepatocellular carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); postsynapse (ortholog) NW_004955437 7202466 7358616 - 102004855 AGCD01034453;AGCD01034454;AGCD01034455;AGCD01034456;AGCD01034457;AGCD01034458;GBCB01112705;XM_005389663 XP_005389720 MODEL 8778525 protein-coding LOC102018455 actin-related protein T1-like NW_004955670 38169 39593 - 102018455 AGCD01077935;GBDF01251846;XM_005415068 XP_005415125 MODEL 8956351 protein-coding Ssbp3 single stranded DNA binding protein 3 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN head development (ortholog); head morphogenesis (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Developmental Disease (ortholog); FOUND IN protein-containing complex (ortholog); transcription regulator complex (ortholog) NW_004955464 4901150 5049341 + 102030505 AGCD01049997;AGCD01049998;GBCE01117941;GBCQ01040067;XM_005398528;XM_013521664 XP_005398585;XP_013377118 MODEL 8885489 ncrna LOC102008287 uncharacterized LOC102008287 NW_004955406 43139560 43143818 + 102008287 AGCD01006726;GBDF01122753;XR_259542 MODEL 9021950 pseudo LOC102010247 S-phase kinase-associated protein 1 pseudogene NW_004955413 5920746 5923360 + 102010247 AGCD01013695 MODEL 8984941 protein-coding Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); manganese ion binding (ortholog); INVOLVED IN basement membrane organization (ortholog); brain development (ortholog); dentate gyrus development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2O (ortholog); congenital muscular dystrophy (ortholog); congenital muscular dystrophy-dystroglycanopathy type A3 (ortholog); FOUND IN Golgi membrane (ortholog); membrane (ortholog) NW_004955464 12076815 12086961 + 102022683 AGCD01050179;AGCD01050180;GBBH01142608;GBCC01026286;XM_013521599 XP_013377053 MODEL 8778454 protein-coding Ribc1 RIB43A domain with coiled-coils 1 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); sperm flagellum (ortholog) NW_004955475 468435 486441 + 102015509 AGCD01054692;GBCE01170361;XM_005401496;XM_005401497;XM_005401498;XM_005401499;XM_005401502 XP_005401553;XP_005401554;XP_005401555;XP_005401556;XP_005401559 MODEL 9012764 protein-coding Psmc3ip PSMC3 interacting protein ENCODES a protein that exhibits DNA binding domain binding (ortholog); identical protein binding (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); estrogen receptor signaling pathway (ortholog); homologous chromosome pairing at meiosis (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); Breast Cancer, Familial (ortholog); ovarian dysgenesis 3 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955451 16464233 16467896 - 102020742 AGCD01043679;GBDF01020452;XM_005394467;XM_013519148 XP_005394524;XP_013374602 MODEL 39131524 protein-coding RTL5 retrotransposon Gag like 5 39133386 snrna U4 U4 spliceosomal RNA 8921758 protein-coding Prokr2 prokineticin receptor 2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN circadian rhythm (ortholog); ASSOCIATED WITH amenorrhea (ortholog); amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog) NW_004955415 15867017 15878471 - 102011652 AGCD01016363;GBCE01138495;XM_005380830;XM_005380831;XM_013512101 XP_005380887;XP_005380888;XP_013367555 MODEL 8783801 pseudo LOC102019964 chromatin modification-related protein MEAF6 pseudogene NW_004955555 1719514 1720177 + 102019964 AGCD01073097 MODEL 8707173 protein-coding LOC102007528 histone H2B type 1 NW_004955465 13392728 13393418 + 102007528 AGCD01050607;XM_005398952 XP_005399009 MODEL 8927681 protein-coding Slc39a8 solute carrier family 39 member 8 ENCODES a protein that exhibits monoatomic cation:bicarbonate symporter activity (ortholog); zinc:bicarbonate symporter activity (ortholog); INVOLVED IN arginine metabolic process (ortholog); bicarbonate transport (ortholog); cadmium ion transmembrane transport (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); congenital disorder of glycosylation type IIn (ortholog); epilepsy (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); lysosomal membrane (ortholog) NW_004955496 6016727 6106965 + 102019081 AGCD01062360;AGCD01062361;AGCD01062362;GBCQ01124663;GBDI01181151;XM_013505413;XM_013505414 XP_013360867;XP_013360868 MODEL 8964435 protein-coding Pla2g12a phospholipase A2 group XIIA ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955496 557379 568100 + 102025924 AGCD01062235;GBDK01017467;XM_005406188 XP_005406245 MODEL 9030355 ncrna LOC102006393 uncharacterized LOC102006393 NW_004955439 11260396 11262507 + 102006393 AGCD01035896;GBBH01057642;XR_261980 MODEL 8796385 protein-coding LOC102019966 sialic acid-binding Ig-like lectin 14 NW_004955558 1309181 1311821 - 102019966 AGCD01073434;GBDI01088489;XM_013508901;XR_001232335 XP_013364355 MODEL 8917431 ncrna LOC102011434 uncharacterized LOC102011434 NW_004955470 12696997 12745344 + 102011434 AGCD01052936;AGCD01052937;GBCE01144649;XR_001237028;XR_001237029;XR_263507 MODEL 730469063 snorna SNORA23 Small nucleolar RNA SNORA23 8785575 protein-coding Phyhip phytanoyl-CoA 2-hydroxylase interacting protein ENCODES a protein that exhibits protein tyrosine kinase binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955403 45698936 45710921 - 102005095 AGCD01002826;GBDJ01298008;XM_005373653;XM_005373654;XM_013513793;XM_013513796;XM_013513800;XM_013513803 XP_005373710;XP_005373711;XP_013369247;XP_013369250;XP_013369254;XP_013369257 MODEL 8957701 protein-coding Pttg1 PTTG1 regulator of sister chromatid separation, securin ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); heat shock protein binding (ortholog); molecular function activator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); homologous chromosome segregation (ortholog); mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Prostate Cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955408 14293704 14301357 + 102027493 AGCD01008391;GBDF01007519;XM_005376266;XM_005376267 XP_005376323;XP_005376324 MODEL 8852521 protein-coding Wdsub1 WD repeat, sterile alpha motif and U-box domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955449 14301798 14348735 + 102006968 AGCD01042164;GBDI01172204;XM_005393376;XM_005393377;XM_013518706;XM_013518707;XR_001235809 XP_005393433;XP_005393434;XP_013374160;XP_013374161 MODEL 8797503 protein-coding Eri1 exoribonuclease 1 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); exoribonuclease II activity (ortholog); histone pre-mRNA stem-loop binding (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); maturation of 5.8S rRNA (ortholog); rRNA 3'-end processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH amenorrhea (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); histone pre-mRNA 3'end processing complex (ortholog); nucleolus (ortholog) NW_004955463 5074921 5104341 + 102006224 AGCD01049629;AGCD01049630;AGCD01049631;AGCD01049632;GBBH01198207;XM_013521560 XP_013377014 MODEL 9015187 protein-coding LOC102013435 endogenous retrovirus group K member 18 Pol protein-like NW_004955511 4811817 4815683 + 102013435 AGCD01066527;XM_013506412 XP_013361866 MODEL 8994407 protein-coding LOC102022522 olfactory receptor 5M3-like NW_004955511 1626694 1627645 - 102022522 AGCD01066377;XM_013506375 XP_013361829 MODEL 730469066 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 730469363 snorna snosnR60_Z15 Small nucleolar RNA snR60/Z15/Z230/Z193/J17 9010445 protein-coding Tlr5 toll like receptor 5 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to mechanical stimulus (ortholog); male gonad development (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); alcohol use disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955520 1544840 1562081 + 102013533 AGCD01068058;GBDI01310659;XM_013507068;XM_013507069;XM_013507070;XM_013507071;XM_013507073;XM_013507074;XR_001231877;XR_001231878;XR_001231879;XR_001231880 XP_013362522;XP_013362523;XP_013362524;XP_013362525;XP_013362527;XP_013362528 MODEL 8950303 protein-coding Rnf180 ring finger protein 180 ENCODES a protein that exhibits ubiquitin conjugating enzyme binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN adult behavior (ortholog); norepinephrine metabolic process (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955446 4544128 4733295 - 102022979 AGCD01040039;AGCD01040040;AGCD01040041;AGCD01040042;AGCD01040043;AGCD01040044;GBDK01430945;XM_005392638;XM_013518461;XM_013518462;XM_013518463;XM_013518464;XM_013518465 XP_005392695;XP_013373915;XP_013373916;XP_013373917;XP_013373918;XP_013373919 MODEL 8862313 ncrna LOC102011865 uncharacterized LOC102011865 NW_004955477 3946286 3949237 + 102011865 AGCD01055577;GBDF01098162;XR_263654 MODEL 39132591 snorna SNORA70 Small nucleolar RNA SNORA70 8782075 pseudo LOC102011017 60S ribosomal protein L7 pseudogene NW_004955423 15037609 15043726 + 102011017 AGCD01023788;AGCD01023789 MODEL 39131362 protein-coding SPMIP11 sperm microtubule inner protein 11 8716221 ncrna LOC102012259 uncharacterized LOC102012259 NW_004955402 6847522 6850356 - 102012259 AGCD01000162;GBDF01162294;XR_001235451 MODEL 8721822 protein-coding Trim11 tripartite motif containing 11 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-macromolecule adaptor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); host-mediated suppression of symbiont invasion (ortholog); negative regulation of AIM2 inflammasome complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955581 114750 123410 + 102013126 AGCD01075657;GBDF01080297;XM_005414233;XM_005414234 XP_005414290;XP_005414291 MODEL 8763963 protein-coding Ppp2r3a protein phosphatase 2 regulatory subunit B''alpha ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN eye photoreceptor cell differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN dopamine signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN protein phosphatase type 2A complex (ortholog) NW_004955501 2648017 2751999 - 102018949 AGCD01064091;GBDJ01199144;XM_005406782;XM_005406783;XM_013505755;XM_013505757 XP_005406839;XP_005406840;XP_013361209;XP_013361211 MODEL 8983901 protein-coding LOC102010250 mitochondrial ornithine transporter 2 NW_004955415 12462640 12463852 + 102010250 AGCD01016197;GBDF01083463;XM_005380737 XP_005380794 MODEL 9062865 protein-coding Ribc2 RIB43A domain with coiled-coils 2 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) NW_004955413 29765119 29781206 + 102004155 AGCD01014594;GBCE01075814;XM_005379489 XP_005379546 MODEL 10371143 protein-coding LOC106147506 neutrophil gelatinase-associated lipocalin-like NW_004955570 474594 492183 + 106147506 AGCD01074728;AGCD01074729;AGCD01074730;XM_013509382 XP_013364836 MODEL 8861847 protein-coding C8b complement C8 beta chain ENCODES a protein that exhibits protein-containing complex binding (ortholog); wide pore channel activity (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); killing of cells of another organism (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN extracellular region (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) NW_004955464 2754655 2796423 + 102022897 AGCD01049965;GBDJ01208068;XM_013521573 XP_013377027 MODEL 8969950 ncrna LOC102005695 uncharacterized LOC102005695 NW_004955468 5827349 5829436 + 102005695 AGCD01051978;XR_263391 MODEL 10170186 protein-coding Rasl11a RAS like family 11 member A INVOLVED IN positive regulation of transcription by RNA polymerase I (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Colorectal Neoplasms (ortholog); endometriosis (ortholog); FOUND IN nucleolus (ortholog) NW_004955497 6695354 6697425 + 106146843 AGCD01062645;GBDF01251613;GBDJ01086656;XM_013505509 XP_013360963 MODEL 730469071 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 8792405 pseudo LOC102009055 60S ribosomal protein L24 pseudogene NW_004955481 3914939 3917042 - 102009055 AGCD01056922 MODEL 8926576 protein-coding LOC102006039 uncharacterized LOC102006039 NW_004955491 8353014 8354199 + 102006039 AGCD01060614;GBCB01010474;XM_013504570 XP_013360024 MODEL 8752149 protein-coding LOC102003224 olfactory receptor 151-like NW_004955412 25576967 25577911 + 102003224 AGCD01013160;XM_005378654 XP_005378711 MODEL 8802871 protein-coding Rpl39 ribosomal protein L39 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cytoplasmic translation (ortholog); innate immune response in mucosa (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) NW_004955534 200591 203827 + 102008660 AGCD01070441;GBDK01010441;XM_005410433 XP_005410490 MODEL 8903703 protein-coding Slc39a9 solute carrier family 39 member 9 ENCODES a protein that exhibits androgen binding (ortholog); G protein-coupled receptor activity (ortholog); zinc efflux transmembrane transporter activity (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); intracellular zinc ion homeostasis (ortholog); regulation of cellular response to testosterone stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955466 901813 960153 - 102028515 AGCD01050682;AGCD01050683;AGCD01050684;AGCD01050685;GBCQ01067034;XM_005399036;XM_013521986;XM_013521987 XP_005399093;XP_013377440;XP_013377441 MODEL 8837782 protein-coding Pla2g12b phospholipase A2 group XIIB INVOLVED IN cholesterol homeostasis (ortholog); low-density lipoprotein particle remodeling (ortholog); triglyceride homeostasis (ortholog) NW_004955437 18694496 18723311 + 102024846 AGCD01034808;AGCD01034809;AGCD01034810;AGCD01034811;GBCE01066878;XM_005390003;XM_013516765;XM_013516766;XM_013516767 XP_005390060;XP_013372219;XP_013372220;XP_013372221 MODEL 8762685 protein-coding Reep6 receptor accessory protein 6 INVOLVED IN detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); fundus dystrophy (ortholog); FOUND IN apical part of cell (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955764 17640 22996 - 102005875 AGCD01078306;GBCE01186476;XM_005415097;XM_005415099;XM_005415100;XM_013510188 XP_005415154;XP_005415156;XP_005415157;XP_013365642 MODEL 39131798 snorna SNORD12 Small nucleolar SNORD12/SNORD106 8938923 protein-coding Plscr5 phospholipid scramblase family member 5 ASSOCIATED WITH lung cancer (ortholog); stomach cancer (ortholog) NW_004955474 10855958 10903801 + 102017654 AGCD01054604;GBDF01041495;XM_005401429;XM_013502715 XP_005401486;XP_013358169 MODEL 39131951 snrna U2 U2 spliceosomal RNA 8864214 ncrna LOC102019971 uncharacterized LOC102019971 NW_004955448 7868274 7959819 - 102019971 AGCD01041427;AGCD01041428;AGCD01041429;AGCD01041430;AGCD01041431;AGCD01041432;GBCQ01031145;XR_001235792;XR_262463 MODEL 9022939 ncrna LOC102018460 uncharacterized LOC102018460 NW_004955452 939105 985800 - 102018460 AGCD01043828;GBDI01241145;XR_262631 MODEL 8813603 protein-coding Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 INVOLVED IN regulation of presynapse assembly (ortholog); regulation of synaptic membrane adhesion (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955468 2629781 2637497 - 102014997 AGCD01051829;GBDI01245282;XM_005399940 XP_005399997 MODEL 9007009 protein-coding LOC102008288 keratin-associated protein 20-2-like NW_004955407 30178341 30178529 + 102008288 AGCD01007628;XM_005375644 XP_005375701 MODEL 8837384 protein-coding LOC102004985 olfactory receptor 7G2-like NW_004955563 363283 413390 - 102004985 AGCD01074063;AGCD01074064;AGCD01074065;AGCD01074066;XM_013509126 XP_013364580 MODEL 8803660 protein-coding LOC102016486 eukaryotic translation initiation factor 3 subunit C NW_004955493 6664693 6679942 - 102016486 AGCD01061126;AGCD01061127;GBDI01017539;XM_005405168 XP_005405225 MODEL 39133387 snrna U4 U4 spliceosomal RNA 8944041 protein-coding Prom1 prominin 1 ENCODES a protein that exhibits actinin binding (ortholog); cadherin binding (ortholog); INVOLVED IN camera-type eye photoreceptor cell differentiation (ortholog); glomerular parietal epithelial cell differentiation (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); Colonic Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); cell surface (ortholog) NW_004955480 7955501 8059537 + 102013828 AGCD01056713;AGCD01056714;AGCD01056715;GBBH01213994;XM_005402515;XM_005402516;XM_005402519;XM_013503331 XP_005402572;XP_005402573;XP_005402576;XP_013358785 MODEL 8801140 pseudo LOC102007529 pre-mRNA-splicing factor CWC22 homolog NW_004955465 13700490 13703481 - 102007529 AGCD01050618;AGCD01050619 MODEL 9066622 protein-coding LOC102019632 zinc finger protein 14-like NW_004955524 494044 505928 - 102019632 AGCD01068679;AGCD01068680;GBDF01220106;XM_013507329 XP_013362783 MODEL 8881814 ncrna LOC102006395 uncharacterized LOC102006395 NW_004955440 17375532 17384121 + 102006395 AGCD01036569;GBDF01080603;XR_262034 MODEL 8780747 protein-coding LOC102008677 deoxynucleotidyltransferase terminal-interacting protein 2-like NW_004955572 1393253 1395378 - 102008677 AGCD01074950;XM_013509439 XP_013364893 MODEL 8866963 protein-coding Tlr6 toll like receptor 6 ENCODES a protein that exhibits diacyl lipopeptide binding (ortholog); identical protein binding (ortholog); lipopeptide binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); cellular response to amyloid-beta (ortholog); cellular response to diacyl bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); aspergillosis (ortholog); asthma (ortholog); FOUND IN Golgi apparatus (ortholog); membrane raft (ortholog); plasma membrane (ortholog) NW_004955443 8401461 8427175 + 102003592 AGCD01038323;AGCD01038324;AGCD01038325;AGCD01038326;GBDF01165081;XM_005391993;XM_005391995;XM_013518056;XM_013518057;XM_013518058;XM_013518059 XP_005392050;XP_005392052;XP_013373510;XP_013373511;XP_013373512;XP_013373513 MODEL 39132582 snorna SNORA70 Small nucleolar RNA SNORA70 8909440 protein-coding LOC102004261 beta-galactosidase-1-like protein 2 NW_004955412 35259632 35292661 + 102004261 AGCD01013408;GBDI01106604;XM_005378599;XM_005378600;XM_005378601;XM_005378602;XM_013511245;XM_013511246 XP_005378656;XP_005378657;XP_005378658;XP_005378659;XP_013366699;XP_013366700 MODEL 730469306 snorna SNORA23 Small nucleolar RNA SNORA23 9049183 ncrna LOC102011435 uncharacterized LOC102011435 NW_004955414 23356883 23359067 - 102011435 AGCD01015497;XR_260190 MODEL 39133365 snorna SNORD121A Small nucleolar RNA SNORD121A 8802130 protein-coding Phyhipl phytanoyl-CoA 2-hydroxylase interacting protein like ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955425 12841027 12885260 + 102012777 AGCD01025523;GBDF01003440;XM_005385926 XP_005385983 MODEL 8781257 protein-coding Ssbp4 single stranded DNA binding protein 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955524 3101935 3109178 - 102010194 AGCD01068856;AGCD01068857;GBBH01030747;GBDK01006965;XM_005409701 XP_005409758 MODEL 8967925 protein-coding Eri2 ERI1 exoribonuclease family member 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); thymoma (ortholog) NW_004955493 96758 103669 - 102029981 AGCD01060838;GBCC01027768;XM_005405034;XM_013504827 XP_005405091;XP_013360281 MODEL 8779538 pseudo LOC102022523 anaphase-promoting complex subunit 10 pseudogene NW_004955431 2848411 2848968 + 102022523 AGCD01029941;XR_261443 MODEL 8983600 trna trnH(gtg) tRNA-His MT 11549 11617 + 15822212 8771415 protein-coding Septin1 septin 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN meiotic metaphase chromosome alignment (ortholog); spindle assembly involved in female meiosis (ortholog); FOUND IN meiotic spindle (ortholog); midbody (ortholog) NW_004955493 7304472 7309022 - 102013424 AGCD01061177;AGCD01061178;GBDJ01178079;XM_005405254;XM_005405255;XM_005405257;XM_013504780 XP_005405311;XP_005405312;XP_005405314;XP_013360234 MODEL 730469149 snorna snosnR66 Small nucleolar RNA snR66 8945747 protein-coding LOC102012260 eukaryotic translation elongation factor 1 epsilon-1 NW_004955583 253526 254563 - 102012260 AGCD01075808;GBCC01054013;XM_005414299 XP_005414356 MODEL 8827671 protein-coding Sh2d3c SH2 domain containing 3C ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955419 891133 921062 + 102026425 AGCD01019621;AGCD01019622;AGCD01019623;GBDF01146187;XM_005382410 XP_005382467 MODEL 8862766 protein-coding Trim13 tripartite motif containing 13 ENCODES a protein that exhibits transcription coactivator activity (ortholog); ubiquitin-like protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); ERAD pathway (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); perinuclear endoplasmic reticulum (ortholog) NW_004955431 3324331 3395724 + 102028005 AGCD01029962;AGCD01029963;AGCD01029964;GBCE01111270;XM_005387600;XM_013515780 XP_005387657;XP_013371234 MODEL 9043097 pseudo LOC102010252 60S ribosomal protein L35a pseudogene NW_004955475 5564528 5564859 + 102010252 AGCD01054922 MODEL 626189211 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 8718908 protein-coding Rnf181 ring finger protein 181 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955424 1907745 1910037 - 102027657 AGCD01024250;GBCQ01010722;XM_005385422 XP_005385479 MODEL 8703793 pseudo LOC102011867 josephin-1-like NW_004955417 14417553 14418271 + 102011867 AGCD01018204 MODEL 8942972 protein-coding Pttg1ip PTTG1 interacting protein ENCODES a protein that exhibits p53 binding (ortholog); INVOLVED IN negative regulation of DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 41753855 41769107 - 102010126 AGCD01007879;AGCD01007880;AGCD01007881;GBCE01004518;GBDI01017833;XM_005375903 XP_005375960 MODEL 9047503 protein-coding Pomgnt2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); protein O-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN neuron migration (ortholog); protein O-linked glycosylation (ortholog); protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH congenital muscular dystrophy-dystroglycanopathy type A8 (ortholog); genetic disease (ortholog); hydrocephalus (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955420 27884262 27899293 + 102014572 AGCD01021462;GBCB01098321;XM_005383498;XM_005383499;XM_005383501;XM_013513533;XM_013513534;XR_001233753;XR_001233754;XR_001233755;XR_001233756;XR_001233757;XR_001233758;XR_001233759 XP_005383555;XP_005383556;XP_005383558;XP_013368987;XP_013368988 MODEL 8711742 protein-coding Pltp phospholipid transfer protein ENCODES a protein that exhibits ceramide binding (ortholog); cerebroside transfer activity (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN ceramide transport (ortholog); flagellated sperm motility (ortholog); glycolipid transport (ortholog); PARTICIPATES IN reverse cholesterol transport pathway; ASSOCIATED WITH atherosclerosis (ortholog); colon adenocarcinoma (ortholog); Coronary Disease (ortholog); FOUND IN extracellular region (ortholog); high-density lipoprotein particle (ortholog); nucleus (ortholog) NW_004955445 11384723 11399217 + 102026050 AGCD01039689;AGCD01039690;GBCE01006971;XM_005392402 XP_005392459 MODEL 8796878 ncrna LOC102013440 uncharacterized LOC102013440 NW_004955514 2930944 2934018 - 102013440 AGCD01067090;GBDF01225338;XR_264504 MODEL 8959674 protein-coding Wdtc1 WD and tetratricopeptide repeats 1 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); histone binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); glucose metabolic process (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN Cul4A-RING E3 ubiquitin ligase complex (ortholog); Cul4B-RING E3 ubiquitin ligase complex (ortholog); cytosol (ortholog) NW_004955452 6519628 6581333 + 102028819 AGCD01044114;AGCD01044115;AGCD01044116;AGCD01044117;GBDF01050605;XM_005394896;XM_005394898 XP_005394953;XP_005394955 MODEL 8938370 ncrna LOC102019974 uncharacterized LOC102019974 NW_004955451 8257772 8275112 - 102019974 AGCD01043266;AGCD01043267;AGCD01043268;GBDF01225497;XR_001235956;XR_262589 MODEL 10182818 protein-coding Ppp2r3b protein phosphatase 2 regulatory subunit B''beta ENCODES a protein that exhibits calcium-dependent protein serine/threonine phosphatase activity (ortholog); chromatin binding (ortholog); protein phosphatase regulator activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); protein phosphatase type 2A complex (ortholog) NW_004955499 596146 606079 - 106146859 AGCD01063247;AGCD01063248;AGCD01063249;AGCD01063250;AGCD01063251;GBCB01020000;GBDK01183067;XM_013505589 XP_013361043 MODEL 8763174 protein-coding Psmc4 proteasome 26S subunit, ATPase 4 INVOLVED IN blastocyst development (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); cytosolic proteasome complex (ortholog); inclusion body (ortholog) NW_004955578 1113445 1120050 - 102021402 AGCD01075510;GBCC01049534;XM_005414079 XP_005414136 MODEL 9020565 ncrna LOC102004986 uncharacterized LOC102004986 NW_004955445 2051400 2053337 + 102004986 AGCD01039349;GBDF01234218;XR_262295 MODEL 8996298 protein-coding Ric1 RIC1 partner of RAB6A GEF complex ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cranial skeletal system development (ortholog); negative regulation of protein catabolic process (ortholog); regulation of extracellular matrix constituent secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); CATIFA Syndrome (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); protein-containing complex (ortholog) NW_004955434 9675654 9770174 + 102004634 AGCD01032308;AGCD01032309;GBDK01079504;XM_005388664;XM_013516307 XP_005388721;XP_013371761 MODEL 9031139 protein-coding C9 complement C9 ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN cell killing (ortholog); complement activation (ortholog); complement activation, GZMK pathway (ortholog); ASSOCIATED WITH age related macular degeneration 15 (ortholog); autosomal dominant polycystic kidney disease (ortholog); complement component 9 deficiency (ortholog); FOUND IN extracellular region (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) NW_004955426 23790792 23824117 - 102010603 AGCD01026656;AGCD01026657;AGCD01026658;XM_013514935 XP_013370389 MODEL 9000066 pseudo LOC102005697 calcyclin-binding protein pseudogene NW_004955414 19427986 19428570 + 102005697 AGCD01015315 MODEL 39132281 snorna snoU105B Small nucleolar RNA U105B 8949334 ncrna LOC102009056 uncharacterized LOC102009056 NW_004955418 15612269 15614198 - 102009056 AGCD01019108;GBDF01097946;XR_260557 MODEL 8738868 protein-coding LOC102006044 uncharacterized LOC102006044 NW_004955423 26874436 26882443 - 102006044 AGCD01024108;GBDJ01373506;XM_013514385 XP_013369839 MODEL 8993926 pseudo LOC102003226 ubiquitin-conjugating enzyme E2 G1 pseudogene NW_004955413 33482340 33483687 - 102003226 AGCD01014672 MODEL 8790074 pseudo LOC102019635 60S acidic ribosomal protein P0 pseudogene NW_004955435 864236 865236 - 102019635 AGCD01032730 MODEL 8816574 protein-coding Rpl3l ribosomal protein L3 like ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN negative regulation of myotube differentiation (ortholog); regulation of striated muscle tissue development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosolic large ribosomal subunit (ortholog) NW_004955442 15311336 15322578 + 102012134 AGCD01037865;AGCD01037866;GBDF01082506;XM_005391489;XM_005391490 XP_005391546;XP_005391547 MODEL 8871452 protein-coding Reg4 regenerating family member 4 ENCODES a protein that exhibits calcium ion binding (ortholog); heparin binding (ortholog); mannan binding (ortholog); INVOLVED IN response to bacterium (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) NW_004955435 22886351 22895884 - 102018638 AGCD01033523;XM_005389090 XP_005389147 MODEL 8905778 protein-coding Pla2g15 phospholipase A2 group XV ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); acylglycerol O-acyltransferase activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); INVOLVED IN ceramide metabolic process (ortholog); diacylglycerol biosynthetic process (ortholog); glycerophospholipid metabolic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriosclerosis (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog); lysosome (ortholog); membrane (ortholog) NW_004955484 8386274 8412952 - 102010372 AGCD01058377;AGCD01058378;AGCD01058379;AGCD01058380;GBDF01154221;XM_005403586 XP_005403643 MODEL 9065111 ncrna LOC102011020 uncharacterized LOC102011020 NW_004955497 1318649 1323855 + 102011020 AGCD01062456;GBCB01078283;XR_264191 MODEL 9015323 protein-coding LOC102018462 sperm-tail PG-rich repeat-containing protein 2 NW_004955405 7862288 8221282 - 102018462 AGCD01004722;AGCD01004723;AGCD01004724;AGCD01004725;AGCD01004726;AGCD01004727;AGCD01004728;AGCD01004729;AGCD01004730;AGCD01004731;AGCD01004732;AGCD01004733;AGCD01004734;AGCD01004735;GBDF01276672;XM_013517444 XP_013372898 MODEL 8701984 protein-coding Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 INVOLVED IN regulation of postsynaptic density assembly (ortholog); regulation of presynapse assembly (ortholog); synaptic membrane adhesion (ortholog); FOUND IN cell surface (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955422 18524786 18527916 - 102027866 AGCD01022950;GBBH01150721;XM_005384362 XP_005384419 MODEL 8845557 ncrna LOC102008291 uncharacterized LOC102008291 NW_004955408 21058606 21068901 - 102008291 AGCD01008549;GBBH01016936;XR_001232367 MODEL 8918307 protein-coding Ssc4d scavenger receptor cysteine rich family member with 4 domains ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955456 14993250 15005664 - 102014535 AGCD01046659;AGCD01046660;AGCD01046661;GBDK01306473;XM_005396898 XP_005396955 MODEL 10189781 protein-coding LOC106147507 uncharacterized LOC106147507 NW_004955570 1757296 1759831 + 106147507 AGCD01074828;GBDK01070947;XM_013509384 XP_013364838 MODEL 8824490 trna trnI tRNA-Ile MT 3680 3747 + 15822203 8794174 protein-coding Eri3 ERI1 exoribonuclease family member 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955464 13855581 13984598 + 102017107 AGCD01050294;AGCD01050295;AGCD01050296;AGCD01050297;AGCD01050298;GBBH01114559;XM_005398762;XM_005398764;XM_013521692;XM_013521693;XM_013521694;XM_013521696;XM_013521697 XP_005398819;XP_005398821;XP_013377146;XP_013377147;XP_013377148;XP_013377150;XP_013377151 MODEL 8735079 ncrna LOC102012261 uncharacterized LOC102012261 NW_004955450 975310 979893 + 102012261 AGCD01042346;GBDF01286154;XR_262513 MODEL 8933571 protein-coding Rasl11b RAS like family 11 member B ENCODES a protein that exhibits transforming growth factor beta receptor binding (ortholog); INVOLVED IN negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH uterine carcinosarcoma (ortholog) NW_004955447 17755277 17758827 - 102010750 AGCD01041134;GBCE01186100;GBDI01325397;XM_013518526 XP_013373980 MODEL 8995846 protein-coding LOC102016489 olfactory receptor 7A17-like NW_004955495 8483137 8484102 - 102016489 AGCD01062212;XM_005406109 XP_005406166 MODEL 39133389 snrna U4 U4 spliceosomal RNA 8942319 protein-coding Prom2 prominin 2 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN negative regulation of caveolin-mediated endocytosis (ortholog); negative regulation of pinocytosis (ortholog); positive regulation of cell projection organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cilium (ortholog); cytoplasmic vesicle (ortholog) NW_004955470 3524900 3538882 + 102012185 AGCD01052703;GBCQ01040977;XM_005400644 XP_005400701 MODEL 8703608 protein-coding Sox15 SRY-box transcription factor 15 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell differentiation (ortholog); myoblast development (ortholog); negative regulation of striated muscle tissue development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955467 9333620 9335498 + 102008611 AGCD01051497;GBDI01384127;XM_005399474;XM_005399475 XP_005399531;XP_005399532 MODEL 9004400 protein-coding Slc3a1 solute carrier family 3 member 1 ENCODES a protein that exhibits L-amino acid transmembrane transporter activity (ortholog); protein heterodimerization activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN amino acid transport (ortholog); aspartate transmembrane transport (ortholog); gene expression (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) NW_004955441 11381390 11418193 + 102003589 AGCD01037107;GBCQ01008312;XM_005390946 XP_005391003 MODEL 39132573 snorna SNORA70 Small nucleolar RNA SNORA70 9065587 protein-coding LOC102006400 galactoside 2-alpha-L-fucosyltransferase 2-like NW_004955559 1877285 1894905 - 102006400 AGCD01073677;AGCD01073678;GBDF01145381;XM_005412939 XP_005412996 MODEL 9062199 ncrna LOC102008678 uncharacterized LOC102008678 NW_004955449 1311463 1320185 + 102008678 AGCD01041795;AGCD01041796;GBCB01051011;XR_001235820;XR_001235821;XR_262484 MODEL 730469547 snorna SNORA23 Small nucleolar RNA SNORA23 8878470 ncrna LOC102004265 uncharacterized LOC102004265 NW_004955413 25404187 25406406 - 102004265 AGCD01014405;GBDK01344235;XR_260113 MODEL 39133345 snorna SNORD123 Small nucleolar RNA SNORD123 8982150 protein-coding Tlr7 toll like receptor 7 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); pattern recognition receptor activity (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to mechanical stimulus (ortholog); cellular response to virus (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Acute Otitis Media (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); early phagosome (ortholog); endoplasmic reticulum (ortholog) NW_004955544 424897 443562 - 102029665 AGCD01071705;GBDJ01403647;XM_005411374 XP_005411431 MODEL 8714655 protein-coding LOC102011437 phospholipid-transporting ATPase FetA-like NW_004955472 770636 868645 - 102011437 AGCD01053355;AGCD01053356;AGCD01053357;AGCD01053358;AGCD01053359;AGCD01053360;AGCD01053361;AGCD01053362;AGCD01053363;GBDK01126213;XM_005401014;XM_005401015;XM_013523039;XM_013523040;XM_013523041;XM_013523042;XM_013523043 XP_005401071;XP_005401072;XP_013378493;XP_013378494;XP_013378495;XP_013378496;XP_013378497 MODEL 9024911 protein-coding Rtl5 retrotransposon Gag like 5 NW_004955475 11499717 11504438 - 102012191 AGCD01055154;GBDJ01165951;GBDK01005230;XM_005401683 XP_005401740 MODEL 8998142 protein-coding Ptx3 pentraxin 3 ENCODES a protein that exhibits (1->3)-beta-D-glucan binding (ortholog); complement component C1q complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); cystic fibrosis (ortholog); Diabetic Foot (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955448 8366795 8373010 + 102016862 AGCD01041442;AGCD01041443;GBBH01137479;GBCQ01115782;XM_013518628 XP_013374082 MODEL 8990010 protein-coding Phykpl 5-phosphohydroxy-L-lysine phospho-lyase ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955408 2038168 2062681 + 102012065 AGCD01007986;GBBH01041369;GBDK01019520;XM_013508019;XM_013508024;XM_013508035;XR_001232156 XP_013363473;XP_013363478;XP_013363489 MODEL 10093894 protein-coding Plvap plasmalemma vesicle associated protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN developmental process (ortholog); MAPK cascade (ortholog); positive regulation of cellular extravasation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); DIARRHEA 10, PROTEIN-LOSING ENTEROPATHY TYPE (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); plasma membrane (ortholog) NW_004955524 885245 895552 + 106146320 AGCD01068722;AGCD01068723;GBCQ01008248;XM_013507239 XP_013362693 MODEL 10266440 protein-coding Spmip2 sperm microtubule inner protein 2 ASSOCIATED WITH esophageal cancer (ortholog); sarcoma (ortholog); uterine carcinosarcoma (ortholog) NW_004955471 12437203 12537997 - 106150313 AGCD01053292;AGCD01053293;AGCD01053294;AGCD01053295;AGCD01053296;GBDF01127768;XM_013522880 XP_013378334 MODEL 8812474 protein-coding Ppp2r3c protein phosphatase 2 regulatory subunit B''gamma INVOLVED IN B cell homeostasis (ortholog); positive regulation of B cell differentiation (ortholog); regulation of antimicrobial humoral response (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Myoectodermal Gonadal Dysgenesis Syndrome (ortholog); spermatogenic failure 36 (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955409 25920973 25943985 + 102030609 AGCD01010141;AGCD01010142;AGCD01010143;GBDF01005289;XM_005376927;XM_005376928;XM_013510375 XP_005376984;XP_005376985;XP_013365829 MODEL 8730640 protein-coding LOC102005698 olfactory receptor 51I1-like NW_004955414 21369682 21370626 - 102005698 AGCD01015417;XM_005380087 XP_005380144 MODEL 8960409 pseudo LOC102007532 60S ribosomal protein L6 pseudogene NW_004955412 12501193 12501804 - 102007532 AGCD01012820 MODEL 730469141 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 8804822 protein-coding U2af1 U2 small nuclear RNA auxiliary factor 1 ENCODES a protein that exhibits RS domain binding (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); disease of cellular proliferation (ortholog); esophageal cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955407 38895741 38909820 + 102005108 AGCD01007813;AGCD01007814;GBBH01031743;XM_005375793;XM_005375794;XM_013505025 XP_005375850;XP_005375851;XP_013360479 MODEL 8909645 protein-coding LOC102011869 butyrophilin subfamily 1 member A1-like NW_004955483 371694 378761 - 102011869 AGCD01057606;AGCD01057607;XM_013503804 XP_013359258 MODEL 9036277 pseudo LOC102018464 40S ribosomal protein S10 pseudogene NW_004955406 4674448 4678458 - 102018464 AGCD01005699 MODEL 8744823 protein-coding Septin10 septin 10 ASSOCIATED WITH COVID-19 (ortholog); FOUND IN actin cytoskeleton (ortholog); microtubule cytoskeleton (ortholog); sperm annulus (ortholog) NW_004955470 12647145 12697616 - 102011648 AGCD01052935;AGCD01052936;GBCQ01097624;GBCQ01097637;XM_005415243;XM_013522808;XM_013522809 XP_005415300;XP_013378262;XP_013378263 MODEL 8891533 protein-coding LOC102013443 pancreatic alpha-amylase NW_004955435 8083712 8090769 - 102013443 AGCD01032994;GBDF01171554;XM_005388816;XM_005388817;XM_005388818 XP_005388873;XP_005388874;XP_005388875 MODEL 9009912 pseudo LOC102019975 leptin receptor overlapping transcript-like 1 pseudogene NW_004955451 15295677 15297374 - 102019975 AGCD01043604 MODEL 8720125 protein-coding Sh2d4a SH2 domain containing 4A ENCODES a protein that exhibits phosphatase binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955403 43111804 43170344 + 102020738 AGCD01002767;GBDK01136635;GBDK01136639;XM_005373614;XM_005373615 XP_005373671;XP_005373672 MODEL 9027719 pseudo LOC102008295 prefoldin subunit 4 pseudogene NW_004955410 29037966 29038370 - 102008295 AGCD01011273 MODEL 8781192 protein-coding LOC102004988 boophilin-H2-like NW_004955445 11800937 11812508 - 102004988 AGCD01039717;GBCE01062671;XM_005392424 XP_005392481 MODEL 8883181 protein-coding Ric3 RIC3 acetylcholine receptor chaperone ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN positive regulation of cytosolic calcium ion concentration (ortholog); positive regulation of protein localization to cell surface (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955414 23925149 23967772 - 102016259 AGCD01015530;AGCD01015531;AGCD01015532;GBDJ01032040;XM_005380215;XM_013512016 XP_005380272;XP_013367470 MODEL 8756488 protein-coding Ssc5d scavenger receptor cysteine rich family member with 5 domains ENCODES a protein that exhibits extracellular matrix binding (ortholog); fibronectin binding (ortholog); laminin binding (ortholog); INVOLVED IN defense response (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955567 789396 809597 - 102021609 AGCD01074433;GBDJ01132647;XM_005413315;XM_005413316;XM_005413317;XM_005413318;XM_013509236;XM_013509237;XM_013509238 XP_005413372;XP_005413373;XP_005413374;XP_005413375;XP_013364690;XP_013364691;XP_013364692 MODEL 8917425 protein-coding Rnf182 ring finger protein 182 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); colon adenocarcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) NW_004955465 813996 871907 - 102009922 AGCD01050317;AGCD01050318;AGCD01050319;AGCD01050320;AGCD01050321;GBDJ01203300;XM_005398795;XM_013521765 XP_005398852;XP_013377219 MODEL 8893185 protein-coding C9orf72 C9orf72-SMCR8 complex subunit ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); autophagy (ortholog); axon extension (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); autolysosome (ortholog); autophagosome (ortholog) NW_004955472 7299092 7337591 + 102018919 AGCD01053618;AGCD01053619;AGCD01053620;GBDF01297009;XM_005401124;XM_005401125;XM_005401126;XM_013522996;XM_013522997 XP_005401181;XP_005401182;XP_005401183;XP_013378450;XP_013378451 MODEL 8967288 pseudo LOC102006045 60S ribosomal protein L31 pseudogene NW_004955495 3574458 3577550 + 102006045 AGCD01061862;XM_005406145 MODEL 39133391 snrna U4 U4 spliceosomal RNA 9004333 protein-coding Rpl4 ribosomal protein L4 ENCODES a protein that exhibits 5S rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN brainstem development (ortholog); cell differentiation (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 9170372 9175224 + 102028360 AGCD01042585;GBDF01007745;XM_005393700 XP_005393757 MODEL 8878963 protein-coding LOC102019636 uncharacterized protein CXorf21-like NW_004955529 1282997 1299375 + 102019636 AGCD01069678;AGCD01069679;AGCD01069680;GBDK01060727;XM_005410075 XP_005410132 MODEL 8916355 ncrna LOC102022525 uncharacterized LOC102022525 NW_004955513 4826030 4833311 - 102022525 AGCD01066940;GBDK01062957;XR_001231759;XR_264480 MODEL 8970210 pseudo LOC102011021 TATA box-binding protein-associated factor RNA polymerase I subunit D pseudogene NW_004955502 102213 103039 + 102011021 AGCD01064232 MODEL 730469352 snorna SNORA24 Small nucleolar RNA SNORA24 8705101 protein-coding LOC102011438 octapeptide-repeat protein T2-like NW_004955414 22365294 22365779 - 102011438 AGCD01015455;XM_005380507 XP_005380564 MODEL 8897185 ncrna LOC102010253 uncharacterized LOC102010253 NW_004955415 31218654 31219403 - 102010253 AGCD01016671;GBDF01001956;XR_260330 MODEL 8857109 protein-coding Psmc5 proteasome 26S subunit, ATPase 5 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA-binding transcription factor binding (ortholog); general transcription initiation factor binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of inclusion body assembly (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955478 7996902 8002183 - 102019597 AGCD01056005;GBDK01011483;XM_005402183 XP_005402240 MODEL 8791365 protein-coding Trim14 tripartite motif containing 14 ENCODES a protein that exhibits molecular adaptor activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); inflammatory response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial outer membrane (ortholog); nucleus (ortholog) NW_004955419 27390098 27420727 + 102019701 AGCD01020432;AGCD01020433;AGCD01020434;GBBH01036750;GBDI01107401;XM_013513283 XP_013368737 MODEL 8780071 protein-coding Lrfn5 leucine rich repeat and fibronectin type III domain containing 5 INVOLVED IN negative regulation of inflammatory response (ortholog); negative regulation of macrophage activation (ortholog); regulation of presynapse assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cell surface (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955409 19710527 19969984 - 102013391 AGCD01009880;AGCD01009881;AGCD01009882;AGCD01009883;AGCD01009884;AGCD01009885;AGCD01009886;AGCD01009887;AGCD01009888;AGCD01009889;GBCE01047829;XM_005376880;XM_005376881;XM_013510459;XM_013510460;XM_013510461;XM_013510462 XP_005376937;XP_005376938;XP_013365913;XP_013365914;XP_013365915;XP_013365916 MODEL 10118238 ncrna LOC106147508 uncharacterized LOC106147508 NW_004955570 1156274 1163013 + 106147508 AGCD01074793;AGCD01074794;GBCQ01139193;XR_001232432 MODEL 730469278 snorna snoU109 Small nucleolar RNA U109 8725546 protein-coding LOC102013444 vomeronasal type-2 receptor 116-like NW_004955524 3567737 3596413 + 102013444 AGCD01068907;AGCD01068908;AGCD01068909;AGCD01068910;AGCD01068911;AGCD01068912;AGCD01068913;GBDF01116192;XM_005409711 XP_005409768 MODEL 9021535 protein-coding Erich1 glutamate rich 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Prostate Cancer (ortholog) NW_004955403 58508113 58580682 + 102024638 AGCD01003183;AGCD01003184;AGCD01003185;AGCD01003186;GBCQ01178907;GBDJ01117475;XM_013515049 XP_013370503 MODEL 8823120 trna trnK(ttt) tRNA-Lys MT 7704 7770 + 15822206 8758197 ncrna LOC102012264 uncharacterized LOC102012264 NW_004955403 2898337 2898936 + 102012264 AGCD01001740;GBDJ01216344;XR_259140 MODEL 8814870 protein-coding LOC102005700 uncharacterized LOC102005700 NW_004955470 11975332 11978904 - 102005700 AGCD01052916;GBCQ01088386;XM_013522705 XP_013378159 MODEL 8780571 ncrna LOC102003227 uncharacterized LOC102003227 NW_004955469 7027260 7028336 + 102003227 AGCD01052404;GBBH01203178;XR_263433 MODEL 10211058 protein-coding Sox17 SRY-box transcription factor 17 ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); cardiac cell fate determination (ortholog); cardiogenic plate morphogenesis (ortholog); ASSOCIATED WITH biliary atresia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955454 13689403 13690019 + 106149834 AGCD01045450;GBCE01132570;GBDK01360915;XM_013520252 XP_013375706 MODEL 8744107 protein-coding Rasl12 RAS like family 12 ASSOCIATED WITH lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955450 10352574 10363906 + 102009901 AGCD01042614;GBCB01061740;GBCE01108831;XM_005393733 XP_005393790 MODEL 8849262 protein-coding Slc3a2 solute carrier family 3 member 2 ENCODES a protein that exhibits aromatic amino acid transmembrane transporter activity (ortholog); double-stranded RNA binding (ortholog); exogenous protein binding (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); cellular response to glucose starvation (ortholog); isoleucine transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog); FOUND IN amino acid transport complex (ortholog); anchoring junction (ortholog); apical plasma membrane (ortholog) NW_004955599 376133 391434 - 102020181 AGCD01076642;AGCD01076643;GBBH01000426;GBDK01018077;XM_013510062 XP_013365516 MODEL 151707877 snorna SNORD124 Small nucleolar RNA SNORD124 8889468 protein-coding LOC102006403 cytochrome P450 3A9-like NW_004955573 1105990 1253925 - 102006403 AGCD01075020;AGCD01075021;AGCD01075022;AGCD01075023;AGCD01075024;AGCD01075025;AGCD01075026;AGCD01075027;AGCD01075028;AGCD01075029;AGCD01075030;AGCD01075031;AGCD01075032;AGCD01075033;AGCD01075034;GBDJ01045815;XM_005413765;XM_005413766;XM_005413767;XM_005413768 XP_005413822;XP_005413823;XP_005413824;XP_005413825 MODEL 8989751 protein-coding Ssh1 slingshot protein phosphatase 1 ENCODES a protein that exhibits actin binding (ortholog); phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell morphogenesis (ortholog); cellular response to ATP (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell leading edge (ortholog); cell projection (ortholog); cytoplasm (ortholog) NW_004955455 10019992 10077485 - 102027716 AGCD01045935;AGCD01045936;GBCE01085173;GBDF01016189;XM_013520441 XP_013375895 MODEL 41410890 protein-coding REG4 8827225 pseudo LOC102011874 cytochrome c-type heme lyase pseudogene NW_004955489 679288 680097 - 102011874 AGCD01059812 MODEL 9027589 protein-coding Tlr8 toll like receptor 8 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); defense response to virus (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); allergic rhinitis (ortholog); anogenital venereal wart (ortholog); FOUND IN endosome membrane (ortholog); external side of plasma membrane (ortholog) NW_004955544 302027 317110 - 102028898 AGCD01071699;GBDK01322932;XM_005411372;XM_005411373 XP_005411429;XP_005411430 MODEL 8882421 protein-coding Ptx4 pentraxin 4 ASSOCIATED WITH uveal melanoma (ortholog) NW_004955442 15750881 15757906 + 102028804 AGCD01037878;GBDF01124152;XM_013517677;XM_013517678 XP_013373131;XP_013373132 MODEL 8877409 protein-coding Pi15 peptidase inhibitor 15 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); urinary bladder cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955444 5647862 5674470 - 102018536 AGCD01038837;GBDJ01187421;XM_005392074 XP_005392131 MODEL 8753807 protein-coding Wee1 WEE1 G2 checkpoint kinase ENCODES a protein that exhibits protein kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN establishment of cell polarity (ortholog); microtubule cytoskeleton organization (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955414 25281725 25299242 + 102030298 AGCD01015590;AGCD01015591;GBDF01053736;GBDI01132275;XM_005380269 XP_005380326 MODEL 8840955 protein-coding Plxdc1 plexin domain containing 1 INVOLVED IN spinal cord development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); extracellular region (ortholog) NW_004955451 13982443 14028235 - 102019131 AGCD01043519;AGCD01043520;AGCD01043521;AGCD01043522;GBBH01005598;GBCQ01054931;XM_013519432 XP_013374886 MODEL 8701261 protein-coding Septin11 septin 11 INVOLVED IN regulation of synapse organization (ortholog); ASSOCIATED WITH autosomal recessive cerebellar ataxia (ortholog); lung cancer (ortholog); methylmalonic acidemia (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955433 1606246 1691819 + 102015657 AGCD01031365;AGCD01031366;GBCE01031455;XM_005388189;XM_005388190;XM_013516164;XM_013516165;XM_013516166;XR_001234733;XR_001234734 XP_005388246;XP_005388247;XP_013371618;XP_013371619;XP_013371620 MODEL 8947018 protein-coding Pomk protein O-mannose kinase ENCODES a protein that exhibits carbohydrate kinase activity (ortholog); phosphotransferase activity, alcohol group as acceptor (ortholog); INVOLVED IN brain development (ortholog); carbohydrate phosphorylation (ortholog); learning or memory (ortholog); ASSOCIATED WITH congenital muscular dystrophy-dystroglycanopathy type A12 (ortholog); genetic disease (ortholog); hydrocephalus (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955457 13299176 13318535 + 102014324 AGCD01047040;AGCD01047041;GBDF01222484;XM_005397077;XM_005397078;XM_013520674;XM_013520675 XP_005397134;XP_005397135;XP_013376128;XP_013376129 MODEL 8867928 protein-coding LOC102009058 L-amino-acid oxidase-like NW_004955418 29930239 29946380 - 102009058 AGCD01019491;AGCD01019492;XM_005382362 XP_005382419 MODEL 9043028 ncrna LOC102007536 uncharacterized LOC102007536 NW_004955468 11575980 11579208 - 102007536 AGCD01052135;GBDF01249875;XR_263412;XR_263413 MODEL 10281951 protein-coding LOC106147509 neural Wiskott-Aldrich syndrome protein-like NW_004955570 1658159 1660879 - 106147509 AGCD01074822;GBCQ01087673;XM_013509427 XP_013364881 MODEL 39132561 snorna SNORA70 Small nucleolar RNA SNORA70 8881765 protein-coding Pla2g1b phospholipase A2 group IB ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); bile acid binding (ortholog); calcium ion binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); arachidonate secretion (ortholog); cellular response to insulin stimulus (ortholog); ASSOCIATED WITH Insulin Resistance (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); secretory granule (ortholog) NW_004955455 11308848 11316245 + 102013049 AGCD01045994;AGCD01045995;AGCD01045996;GBDK01431833;XM_005396512 XP_005396569 MODEL 8886306 ncrna LOC102006049 uncharacterized LOC102006049 NW_004955425 7368402 7403190 + 102006049 AGCD01025384;GBDF01196098;XR_001234261;XR_001234262;XR_001234263;XR_001234264 MODEL 8903297 ncrna LOC102004269 uncharacterized LOC102004269 NW_004955469 7286277 7287635 + 102004269 AGCD01052412;AGCD01052413;GBDF01308355;XR_263434 MODEL 8906053 protein-coding Rtl6 retrotransposon Gag like 6 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); substance-related disorder (ortholog) NW_004955413 29238719 29244112 - 102024106 AGCD01014578;AGCD01014579;GBDF01123354;GBDJ01085414;XM_005379464 XP_005379521 MODEL 8861831 pseudo LOC102022528 integral membrane protein GPR180 pseudogene NW_004955432 3205501 3206196 + 102022528 AGCD01030638 MODEL 9021432 protein-coding LOC102019638 HLA class II histocompatibility antigen, DRB1-15 beta chain-like NW_004955437 1121086 1145720 - 102019638 AGCD01034190;GBBH01035303;XM_005389450 XP_005389507 MODEL 730469379 snorna SNORA24 Small nucleolar RNA SNORA24 8719500 ncrna LOC102019978 uncharacterized LOC102019978 NW_004955454 2669191 2673784 - 102019978 AGCD01045028;GBDF01208782;XR_001236254;XR_262770 MODEL 8705181 ncrna LOC102016496 uncharacterized LOC102016496 NW_004955426 22212445 22224220 - 102016496 AGCD01026613;AGCD01026614;GBDF01006654;XR_261217 MODEL 8735017 protein-coding LOC102011439 interferon-inducible GTPase 1-like NW_004955415 3743539 3769145 + 102011439 AGCD01015950;AGCD01015951;AGCD01015952;GBCB01074015;XM_005380561;XM_013512404 XP_005380618;XP_013367858 MODEL 8723486 protein-coding Ppp2r5a protein phosphatase 2 regulatory subunit B'alpha ENCODES a protein that exhibits kinase binding (ortholog); kinase inhibitor activity (ortholog); protein phosphatase activator activity (ortholog); INVOLVED IN negative regulation of protein localization to plasma membrane (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Emphysema (ortholog); esophageal cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955406 5059826 5115312 - 102014416 AGCD01005711;GBDK01003948;XM_005375450 XP_005375507 MODEL 8887921 ncrna LOC102004989 uncharacterized LOC102004989 NW_004955445 15824960 15826502 + 102004989 AGCD01039857;GBDF01080622;XR_262340 MODEL 730469182 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 8888759 protein-coding LOC102010255 deleted in malignant brain tumors 1 protein NW_004955477 966067 1052359 + 102010255 AGCD01055497;AGCD01055498;AGCD01055499;AGCD01055500;AGCD01055501;AGCD01055502;GBDF01198016;XM_013503021 XP_013358475 MODEL 9062780 protein-coding Ric8a RIC8 guanine nucleotide exchange factor A ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); basement membrane organization (ortholog); cell migration involved in gastrulation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955476 11827004 11833495 - 102029962 AGCD01055475;GBBH01139853;XM_005401889;XM_005401890;XM_013502915 XP_005401946;XP_005401947;XP_013358369 MODEL 8956603 ncrna LOC102013451 uncharacterized LOC102013451 NW_004955547 654544 658859 - 102013451 AGCD01072171;GBDK01382015;XR_001232230;XR_264899 MODEL 9041652 pseudo LOC102008680 wiskott-Aldrich syndrome protein family member 1 pseudogene NW_004955403 9508735 9510324 + 102008680 AGCD01001908 MODEL 8724020 ncrna LOC102012268 uncharacterized LOC102012268 NW_004955403 25880625 25907260 + 102012268 AGCD01002295;GBDF01251079;XR_001233582;XR_001233583;XR_259202 MODEL 8919477 protein-coding Prorp protein only RNase P catalytic subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); INVOLVED IN mitochondrial tRNA 5'-end processing (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 54 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrial ribonuclease P complex (ortholog) NW_004955409 25791209 25920651 - 102003843 AGCD01010138;AGCD01010139;AGCD01010140;AGCD01010141;GBCB01003766;XM_005376929;XM_005376930;XM_005376931 XP_005376986;XP_005376987;XP_005376988 MODEL 8888147 protein-coding U2af2 U2 small nuclear RNA auxiliary factor 2 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); enzyme binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); negative regulation of protein ubiquitination (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); developmental delay, dysmorphic facies, and brain anomalies (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955567 683472 699105 - 102013226 AGCD01074424;AGCD01074425;GBDJ01002993;XM_005413290;XM_005413291 XP_005413347;XP_005413348 MODEL 8719535 protein-coding Erich2 glutamate rich 2 NW_004955449 4013473 4040524 - 102023213 AGCD01041872;GBBH01000968;XM_005393243;XM_013518737;XM_013518738;XM_013518739;XM_013518740;XM_013518741;XM_013518742;XM_013518743 XP_005393300;XP_013374191;XP_013374192;XP_013374193;XP_013374194;XP_013374195;XP_013374196;XP_013374197 MODEL 8878159 ncrna LOC102018470 uncharacterized LOC102018470 NW_004955456 7484949 7492235 + 102018470 AGCD01046416;AGCD01046417;GBDF01004071;XR_262887 MODEL 8939670 protein-coding Rpl5 ribosomal protein L5 ENCODES a protein that exhibits 5S rRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); INVOLVED IN cytoplasmic translation (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); positive regulation of phosphatase activity (ortholog); PARTICIPATES IN p53 signaling pathway; ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 6 (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955423 1748809 1758622 - 102020459 AGCD01023451;GBCQ01007562;XM_005385039;XM_005385040 XP_005385096;XP_005385097 MODEL 8881072 protein-coding LOC102003231 protocadherin beta-12 NW_004955415 12598599 12600263 - 102003231 AGCD01016205;GBDF01191900;XM_005381127 XP_005381184 MODEL 39133393 snrna U4 U4 spliceosomal RNA 8939439 protein-coding LOC102008301 zinc finger protein 527 NW_004955468 1868700 1887881 + 102008301 AGCD01051785;GBDF01117493;XM_005399918;XM_013522318 XP_005399975;XP_013377772 MODEL 8969408 pseudo LOC102011022 zinc finger protein 649-like NW_004955503 3712980 3714698 + 102011022 AGCD01064640 MODEL 8807181 protein-coding Rassf1 Ras association domain family member 1 ENCODES a protein that exhibits identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of protein ubiquitination (ortholog); protein stabilization (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); bladder disease (ortholog); FOUND IN microtubule cytoskeleton (ortholog); nucleus (ortholog) NW_004955532 2132892 2142106 - 102004113 AGCD01070219;AGCD01070220;GBDF01153768;GBDK01000157;XM_005410266;XM_005410267 XP_005410323;XP_005410324 MODEL 8961186 pseudo LOC102006405 lupus La protein homolog pseudogene NW_004955449 5976871 5978023 + 102006405 AGCD01041946 MODEL 8968540 protein-coding Sh2d4b SH2 domain containing 4B ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog) NW_004955510 506117 602140 + 102028881 AGCD01066151;AGCD01066152;AGCD01066153;AGCD01066154;AGCD01066155;AGCD01066156;AGCD01066157;GBCE01122178;XM_013506308 XP_013361762 MODEL 8792162 protein-coding Pi16 peptidase inhibitor 16 INVOLVED IN negative regulation of cell growth involved in cardiac muscle cell development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); stomach cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955437 6066685 6075077 - 102023293 AGCD01034414;GBBH01004356;XM_005389631;XM_013517114;XM_013517115 XP_005389688;XP_013372568;XP_013372569 MODEL 8985394 protein-coding Lrg1 leucine rich alpha-2-glycoprotein 1 ENCODES a protein that exhibits type I transforming growth factor beta receptor binding (ortholog); type II transforming growth factor beta receptor binding (ortholog); INVOLVED IN keratinocyte migration (ortholog); leukocyte adhesion to vascular endothelial cell (ortholog); positive regulation of angiogenesis (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Colonic Neoplasms (ortholog); Drug Hypersensitivity Syndrome (ortholog); FOUND IN extracellular region (ortholog) NW_004955495 4402670 4405666 + 102007244 AGCD01061922;GBBH01012150;XM_005405791 XP_005405848 MODEL 10335251 protein-coding Tlr9 toll like receptor 9 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); pattern recognition receptor activity (ortholog); siRNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); canonical NF-kappaB signal transduction (ortholog); cellular response to chloroquine (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Achlorhydria (ortholog); acute kidney failure (ortholog); acute necrotizing pancreatitis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) NW_004955532 3828645 3832699 - 106146245 AGCD01070299;GBBH01177352;XM_005410346;XM_013507652;XM_013507653 XP_005410403;XP_013363106;XP_013363107 MODEL 8916402 protein-coding Rnf183 ring finger protein 183 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); protein autoubiquitination (ortholog); protein polyubiquitination (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cis-Golgi network membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955419 14181073 14189230 + 102023601 AGCD01020013;GBCQ01152724;XM_005382678;XM_005382679;XM_005382680;XM_013513137 XP_005382735;XP_005382736;XP_005382737;XP_013368591 MODEL 8957804 protein-coding Ca1 carbonic anhydrase 1 ENCODES a protein that exhibits arylesterase activity (ortholog); carbonate dehydratase activity (ortholog); cyanamide hydratase activity (ortholog); INVOLVED IN response to fructose (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH adenocarcinoma (ortholog); adult respiratory distress syndrome (ortholog); chronic pancreatitis (ortholog) NW_004955417 3270619 3313261 - 102004162 AGCD01017911;GBBH01037140;XM_005381742;XM_005381743;XM_013512805;XM_013512806;XM_013512807;XM_013512808 XP_005381799;XP_005381800;XP_013368259;XP_013368260;XP_013368261;XP_013368262 MODEL 8750241 protein-coding LOC102007537 apolipoprotein L3-like NW_004955413 22864060 22868517 - 102007537 AGCD01014318;XM_013511300 XP_013366754 MODEL 9004565 pseudo LOC102009061 liver carboxylesterase 2-like NW_004955484 9676099 9679287 - 102009061 AGCD01058425 MODEL 10323066 ncrna LOC106147510 uncharacterized LOC106147510 NW_004955570 1708736 1730326 - 106147510 AGCD01074826;GBCE01160619;XR_001232433 MODEL 8985404 protein-coding Slc40a1 solute carrier family 40 member 1 ENCODES a protein that exhibits ferrous iron transmembrane transporter activity (ortholog); identical protein binding (ortholog); iron ion transmembrane transporter activity (ortholog); INVOLVED IN endothelium development (ortholog); intracellular iron ion homeostasis (ortholog); iron ion export across plasma membrane (ortholog); PARTICIPATES IN iron efflux pathway; ASSOCIATED WITH aceruloplasminemia (ortholog); anemia (ortholog); autistic disorder (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); synaptic vesicle (ortholog) NW_004955403 9253734 9271732 + 102007721 AGCD01001904;GBCE01003262;XM_005373321 XP_005373378 MODEL 8836403 ncrna LOC102019644 uncharacterized LOC102019644 NW_004955441 14802468 14824681 - 102019644 AGCD01037222;AGCD01037223;AGCD01037224;GBCB01060978;XR_262082 MODEL 8967462 protein-coding LOC102011879 spermatogenesis-associated protein 31E1-like NW_004955422 23602412 23608132 + 102011879 AGCD01023197;GBDK01288025;XM_005384703 XP_005384760 MODEL 8946950 protein-coding Psmc6 proteasome 26S subunit, ATPase 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of inclusion body assembly (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytosolic proteasome complex (ortholog); inclusion body (ortholog); nucleus (ortholog) NW_004955409 10454210 10474872 - 102009582 AGCD01009472;GBDJ01190316;XM_005376779 XP_005376836 MODEL 730469553 snorna snoU109 Small nucleolar RNA U109 8805524 protein-coding Trim15 tripartite motif containing 15 ENCODES a protein that exhibits molecular sequestering activity (ortholog); transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); negative regulation of intracellular transport of viral material (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955583 277564 283422 + 102029919 AGCD01075808;XM_013509792 XP_013365246 MODEL 9012055 protein-coding Plxdc2 plexin domain containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nuclear body (ortholog) NW_004955429 8141253 8566927 - 102021693 AGCD01028617;AGCD01028618;AGCD01028619;AGCD01028620;AGCD01028621;AGCD01028622;GBCE01053820;XM_005386938 XP_005386995 MODEL 9000673 protein-coding Septin12 septin 12 ENCODES a protein that exhibits GTP binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); positive regulation of protein localization (ortholog); septin ring assembly (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); spermatogenic failure 10 (ortholog); urinary bladder cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); microtubule cytoskeleton (ortholog); midbody (ortholog) NW_004955442 12704546 12717905 + 102004523 AGCD01037745;GBDF01236610;XM_005391270;XM_005391271 XP_005391327;XP_005391328 MODEL 9013310 ncrna LOC102010258 uncharacterized LOC102010258 NW_004955416 28137227 28141716 + 102010258 AGCD01017625;GBDF01281711;XR_260429 MODEL 8752232 ncrna LOC102005701 uncharacterized LOC102005701 NW_004955471 8033027 8043382 + 102005701 AGCD01053175;GBDF01122898;XR_263529 MODEL 9065897 protein-coding Sox18 SRY-box transcription factor 18 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel development (ortholog); blood vessel endothelial cell migration (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); basal cell carcinoma (ortholog); genetic disease (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955528 204729 206772 + 102009103 AGCD01069514;AGCD01069515;GBBH01064583;GBBH01064584;XM_013507511 XP_013362965 MODEL 9029511 protein-coding Pla2g2c phospholipase A2 group IIC INVOLVED IN phospholipid catabolic process (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955452 771031 783323 - 102017836 AGCD01043827;GBDI01034019;XM_005394677;XR_001236118 XP_005394734 MODEL 8971519 pseudo LOC102006050 nicotinamide phosphoribosyltransferase-like NW_004955426 5308768 5326304 - 102006050 AGCD01026121 MODEL 616940644 snorna SNORD125 Small nucleolar RNA SNORD125 8767456 protein-coding Ric8b RIC8 guanine nucleotide exchange factor B ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein folding chaperone (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of G protein-coupled receptor signaling pathway (ortholog); sensory perception of smell (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); stomach cancer (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955405 40659946 40782870 + 102023663 AGCD01005522;AGCD01005523;AGCD01005524;AGCD01005525;AGCD01005526;AGCD01005527;AGCD01005528;GBDK01360337;XM_013519064;XM_013519068;XM_013519080;XM_013519087;XM_013519095;XR_001235931;XR_001235932;XR_001235933;XR_001235934;XR_001235936 XP_013374518;XP_013374522;XP_013374534;XP_013374541;XP_013374549 MODEL 8812727 protein-coding U2surp U2 snRNP associated SURP domain containing ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); U2 snRNP (ortholog) NW_004955508 2880638 2931146 - 102011224 AGCD01065799;GBCE01118464;GBDF01047997;XM_005407733 XP_005407790 MODEL 8759388 protein-coding Rel REL proto-oncogene, NF-kB subunit ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); negative regulation of interferon-beta production (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atrophic gastritis (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955424 22909035 22939651 - 102027422 AGCD01024993;AGCD01024994;GBBH01182330;XM_005385753;XM_013514714 XP_005385810;XP_013370168 MODEL 8897032 protein-coding LOC102004271 olfactory receptor 51G2-like NW_004955414 20963996 20965027 - 102004271 AGCD01015398;XM_005380489 XP_005380546 MODEL 9040054 pseudo LOC102022532 olfactory receptor 24-like NW_004955524 1445223 1447462 - 102022532 AGCD01068750 MODEL 9043215 protein-coding Pudp pseudouridine 5'-phosphatase ENCODES a protein that exhibits pseudouridine 5'-phosphatase activity (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955499 5110297 5181487 - 102017474 AGCD01063508;AGCD01063509;GBDI01066523;XM_005406540 XP_005406597 MODEL 626189146 snorna SNORA24 Small nucleolar RNA SNORA24 8715244 trna trnL1(tag) tRNA-Leu MT 11681 11750 + 15822232 8945232 pseudo LOC102016497 ras-related protein Rab-22A pseudogene NW_004955503 8216257 8217105 + 102016497 AGCD01064812 MODEL 8939025 ncrna LOC102019981 uncharacterized LOC102019981 NW_004955406 40112681 40116587 + 102019981 AGCD01006654;GBDK01373912;XR_259529 MODEL 8833003 ncrna LOC102011440 uncharacterized LOC102011440 NW_004955476 3980903 3992756 - 102011440 AGCD01055264;GBDF01249578;XR_263619 MODEL 8791362 pseudo LOC102019647 dnaJ homolog subfamily B member 6-like NW_004955552 1386778 1387533 + 102019647 AGCD01072771;XR_264925 MODEL 9053137 protein-coding Ppp2r5b protein phosphatase 2 regulatory subunit B'beta INVOLVED IN cellular response to growth factor stimulus (ortholog); negative regulation of G0 to G1 transition (ortholog); positive regulation of neuron projection development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 16 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN protein phosphatase type 2A complex (ortholog) NW_004955422 20252306 20260776 - 102022091 AGCD01023072;GBCB01023268;XM_005384532;XM_005384533;XM_013513967;XM_013513968 XP_005384589;XP_005384590;XP_013369421;XP_013369422 MODEL 730469022 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 9040196 protein-coding LOC102004990 zinc finger protein 14-like NW_004955569 1305100 1342506 - 102004990 AGCD01074646;AGCD01074647;AGCD01074648;AGCD01074649;GBDI01011400;XM_013509371 XP_013364825 MODEL 39132550 snorna SNORA70 Small nucleolar RNA SNORA70 8985655 protein-coding Pomp proteasome maturation protein INVOLVED IN proteasome assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); epilepsy (ortholog); exanthem (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955497 7978434 7996982 + 102017356 AGCD01062689;AGCD01062690;GBDF01005439;XM_013505497 XP_013360951 MODEL 8790647 pseudo LOC102013453 gamma-aminobutyric acid receptor-associated protein pseudogene NW_004955442 14455390 14458901 - 102013453 AGCD01037821 MODEL 8717189 protein-coding LOC102008682 plakophilin-2-like NW_004956130 12 5617 + 102008682 AGCD01079104;GBDK01128349;GBDK01128352;XM_005415169 XP_005415226 MODEL 9048467 protein-coding Rnf185 ring finger protein 185 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN defense response to virus (ortholog); ERAD pathway (ortholog); positive regulation of ERAD pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955455 5351530 5394615 + 102005340 AGCD01045724;GBDF01128641;XM_005396299;XM_013520462;XM_013520463;XM_013520464 XP_005396356;XP_013375916;XP_013375917;XP_013375918 MODEL 8775586 protein-coding LOC102007543 tripartite motif-containing protein 5-like NW_004955414 21602756 21610062 - 102007543 AGCD01015424;XM_013511732 XP_013367186 MODEL 8720813 protein-coding Pros1 protein S ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN liver development (ortholog); negative regulation of coagulation (ortholog); positive regulation of phagocytosis (ortholog); PARTICIPATES IN protein C anticoagulant pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); autosomal dominant thrombophilia due to protein S deficiency (ortholog); autosomal recessive thrombophilia due to protein S deficiency (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955407 3514900 3566165 + 102002997 AGCD01006863;GBCQ01040731;GBDF01157496;XM_013503591 XP_013359045 MODEL 8838711 protein-coding Erich3 glutamate rich 3 INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955423 18009243 18110340 + 102028651 AGCD01023866;GBDI01375173;XM_005385238;XM_005385239 XP_005385295;XP_005385296 MODEL 8852590 pseudo LOC102009062 kinesin-associated protein 3-like NW_004955420 7992286 7995293 - 102009062 AGCD01020709 MODEL 39133395 snrna U4 U4 spliceosomal RNA 9056345 ncrna LOC102011023 uncharacterized LOC102011023 NW_004955504 1257357 1259714 - 102011023 AGCD01064836;GBDF01264466;XR_264285 MODEL 8800480 protein-coding Rtl9 retrotransposon Gag like 9 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog) NW_004955490 5409277 5420508 - 102008324 AGCD01060204;GBDF01110928;XM_005404656 XP_005404713 MODEL 8773506 protein-coding Slc41a1 solute carrier family 41 member 1 ENCODES a protein that exhibits magnesium ion transmembrane transporter activity (ortholog); magnesium:sodium antiporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN cellular response to magnesium ion (ortholog); intracellular magnesium ion homeostasis (ortholog); magnesium ion transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955406 41481831 41502992 - 102013380 AGCD01006685;GBCQ01039252;XM_005375375;XM_005375376 XP_005375432;XP_005375433 MODEL 8717760 protein-coding LOC102008303 zinc finger protein 419-like NW_004955468 4251476 4270784 + 102008303 AGCD01051903;AGCD01051904;GBCE01148167;XM_005400012;XM_013522366 XP_005400069;XP_013377820 MODEL 8919008 protein-coding Rassf10 Ras association domain family member 10 INVOLVED IN positive regulation of neural precursor cell proliferation (ortholog); positive regulation of neurogenesis (ortholog); FOUND IN cytosol (ortholog) NW_004955414 28405024 28407734 + 102016260 AGCD01015681;GBBH01165129;XM_005380309 XP_005380366 MODEL 8746778 protein-coding Pi4k2a phosphatidylinositol 4-kinase type 2 alpha ENCODES a protein that exhibits 1-phosphatidylinositol 4-kinase activity (ortholog); AP-3 adaptor complex binding (ortholog); ATP binding (ortholog); INVOLVED IN basophil degranulation (ortholog); phosphatidylinositol biosynthetic process (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); NEURODEVELOPMENTAL DISORDER WITH HYPERKINETIC MOVEMENTS, SEIZURES, AND STRUCTURAL BRAIN ABNORMALITIES (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN BLOC-1 complex (ortholog); clathrin-sculpted vesicle (ortholog); cytoplasmic vesicle (ortholog) NW_004955507 3729947 3761703 + 102030102 AGCD01065633;AGCD01065634;AGCD01065635;GBCB01098339;GBDF01156561;XM_013506190;XM_013506191 XP_013361644;XP_013361645 MODEL 8936013 protein-coding Sh2d5 SH2 domain containing 5 ASSOCIATED WITH esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN postsynaptic density (ortholog) NW_004955452 1240621 1252088 - 102022453 AGCD01043836;AGCD01043837;GBDF01145516;XM_005394691;XM_013519747;XM_013519748;XM_013519750;XM_013519751;XM_013519752;XM_013519753 XP_005394748;XP_013375201;XP_013375202;XP_013375204;XP_013375205;XP_013375206;XP_013375207 MODEL 8948495 protein-coding Plxna1 plexin A1 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); INVOLVED IN dichotomous subdivision of terminal units involved in salivary gland branching (ortholog); gonadotrophin-releasing hormone neuronal migration to the hypothalamus (ortholog); neuron projection extension (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955429 16482821 16522978 - 102030554 AGCD01028833;GBBH01185809;XM_013515479;XM_013515480 XP_013370933;XP_013370934 MODEL 8940992 protein-coding Tlx1 T cell leukemia homeobox 1 INVOLVED IN animal organ formation (ortholog); cell fate commitment (ortholog); central nervous system development (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); Aneuploidy (ortholog); Neoplastic Cell Transformation (ortholog) NW_004955485 9070601 9076063 - 102018292 AGCD01058744;GBCE01041371;XM_005403934 XP_005403991 MODEL 9005600 ncrna LOC102012270 uncharacterized LOC102012270 NW_004955451 13227860 13233237 + 102012270 AGCD01043462;GBDK01199688;XR_262601 MODEL 9022747 protein-coding Ssh2 slingshot protein phosphatase 2 ENCODES a protein that exhibits actin binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955481 3380212 3633074 + 102008314 AGCD01056903;AGCD01056904;AGCD01056905;AGCD01056906;AGCD01056907;AGCD01056908;AGCD01056909;GBDF01161851;XM_005402672;XM_005402673;XM_013503356 XP_005402729;XP_005402730;XP_013358810 MODEL 8962133 pseudo LOC102018472 olfactory receptor 9-like NW_004955458 3279883 3281726 + 102018472 AGCD01047291 MODEL 10359842 protein-coding Rpl6 ribosomal protein L6 ENCODES a protein that exhibits 5.8S rRNA binding (ortholog); mRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); cervical cancer (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955482 8917777 8923150 - 106146503 AGCD01057556;AGCD01057557;GBCB01004318;GBDK01007836;XM_013503571 XP_013359025 MODEL 8853652 protein-coding Wee2 WEE2 oocyte meiosis inhibiting kinase INVOLVED IN female meiotic nuclear division (ortholog); female pronucleus assembly (ortholog); negative regulation of meiotic cell cycle process involved in oocyte maturation (ortholog); ASSOCIATED WITH Oocyte Maturation Defect 5 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955494 1836909 1869384 - 102015022 AGCD01061424;GBDJ01283231;XM_013505022 XP_013360476 MODEL 8723900 ncrna LOC102003232 uncharacterized LOC102003232 NW_004955416 2924029 2929842 + 102003232 AGCD01016863;GBDF01042362;XR_260349;XR_260350;XR_260351 MODEL 39133675 snorna U3 Small nucleolar RNA U3 8789688 ncrna LOC102004272 uncharacterized LOC102004272 NW_004955415 5517401 5522758 + 102004272 AGCD01015995;GBDK01393200;XR_260271 MODEL 9051501 protein-coding Ca10 carbonic anhydrase 10 (inactive) ENCODES a protein that exhibits neurexin family protein binding (ortholog); INVOLVED IN gene expression (ortholog); protein processing (ortholog); ASSOCIATED WITH asthma (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN synapse (ortholog) NW_004955451 9877768 10362363 + 102021197 AGCD01043313;AGCD01043314;AGCD01043315;AGCD01043316;AGCD01043317;AGCD01043318;AGCD01043319;AGCD01043320;XM_013519057 XP_013374511 MODEL 8774326 protein-coding Rela RELA proto-oncogene, NF-kB subunit ENCODES a protein that exhibits actinin binding (ortholog); ankyrin repeat binding (ortholog); chromatin binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); antiviral innate immune response (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN ceramide signaling pathway; interleukin-1 signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); adenocarcinoma (ortholog); alcohol dependence (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955422 19602930 19612263 + 102030643 AGCD01023023;AGCD01023024;GBCE01054806;GBDK01101045;XM_005384468 XP_005384525 MODEL 8994863 pseudo LOC102006407 28S ribosomal protein S36, mitochondrial pseudogene NW_004955402 32490863 32492527 - 102006407 AGCD01000824 MODEL 8802107 pseudo LOC102011882 thioredoxin pseudogene NW_004955494 7209430 7210242 - 102011882 AGCD01061546 MODEL 8807069 protein-coding Septin14 septin 14 INVOLVED IN neuron migration (ortholog); protein localization to perinuclear region of cytoplasm (ortholog); spermatid development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); glioblastoma (ortholog); FOUND IN acrosomal vesicle (ortholog); axon (ortholog); cytoplasm (ortholog) NW_004955456 8066570 8102318 - 102027491 AGCD01046447;AGCD01046448;AGCD01046449;GBDF01128136;XM_005396691 XP_005396748 MODEL 8712326 protein-coding Psmd1 proteasome 26S subunit, non-ATPase 1 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); synaptic vesicle (ortholog) NW_004955453 4314177 4397972 - 102024421 AGCD01044686;AGCD01044687;GBCQ01003438;GBDI01005709;XM_013519960 XP_013375414 MODEL 9010540 protein-coding Trim16 tripartite motif containing 16 ENCODES a protein that exhibits DNA binding (ortholog); interleukin-1 binding (ortholog); NACHT domain binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of interleukin-1 beta production (ortholog); positive regulation of keratinocyte differentiation (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); lung cancer (ortholog); Ovarian Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); PML body (ortholog) NW_004955467 2059793 2084221 + 102018703 AGCD01051300;GBCE01172297;XM_005399325 XP_005399382 MODEL 8740923 protein-coding Rtn1 reticulon 1 INVOLVED IN negative regulation of amyloid-beta formation (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); melanoma (ortholog); Myocardial Ischemia (ortholog); FOUND IN dendrite (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955466 13290419 13454387 - 102009815 AGCD01051156;AGCD01051157;AGCD01051158;AGCD01051159;AGCD01051160;GBBH01063056;XM_013522002 XP_013377456 MODEL 8907821 protein-coding LOC102019656 SLAM family member 9-like NW_004955623 7603 114709 - 102019656 AGCD01077398;AGCD01077399;AGCD01077400;AGCD01077401;AGCD01077402;AGCD01077403;AGCD01077404;AGCD01077405;AGCD01077406;AGCD01077407;AGCD01077408;AGCD01077409;AGCD01077410;AGCD01077411;GBDJ01143899;GBDK01263692;XM_013510158 XP_013365612 MODEL 730469285 snorna SNORA42 Small nucleolar RNA SNORA42/SNORA80 family 8796675 protein-coding Spmip3 sperm microtubule inner protein 3 ASSOCIATED WITH cervical cancer (ortholog); stomach cancer (ortholog); thymoma (ortholog) NW_004955406 7651785 7682027 + 102005664 AGCD01005774;GBDF01049394;XM_005374774;XM_013520358 XP_005374831;XP_013375812 MODEL 10338025 ncrna LOC106147511 uncharacterized LOC106147511 NW_004955408 26157766 26248441 + 106147511 AGCD01008663;AGCD01008664;AGCD01008665;AGCD01008666;GBDJ01034794;XR_001232434;XR_001232437 MODEL 8921651 protein-coding LOC102005702 chromosome unknown open reading frame, human C11orf58 ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog) NW_004955414 31621806 31642993 + 102005702 AGCD01015759;GBDF01005761;XM_005380367;XM_005380368 XP_005380424;XP_005380425 MODEL 39132269 snorna SNORD127 Small nucleolar RNA SNORD127 9019438 protein-coding Pla2g2d phospholipase A2 group IID ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation (ortholog); negative regulation of T cell activation (ortholog); negative regulation of T cell proliferation (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955452 738133 743718 - 102016971 AGCD01043827;GBDI01339544;XM_005394674 XP_005394731 MODEL 8918878 ncrna LOC102008684 uncharacterized LOC102008684 NW_004955403 54070872 54077075 - 102008684 AGCD01003087;GBDJ01213136;XR_001234164;XR_001234165;XR_001234166;XR_001234167;XR_001234168;XR_001234169;XR_001234171;XR_001234172;XR_001234173 MODEL 8838468 protein-coding Rictor RPTOR independent companion of MTOR complex 2 ENCODES a protein that exhibits ATP binding (ortholog); enzyme-substrate adaptor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); embryo development ending in birth or egg hatching (ortholog); lipid biosynthetic process (ortholog); PARTICIPATES IN mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); breast ductal carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog) NW_004955426 23468112 23582587 - 102020032 AGCD01026644;AGCD01026645;AGCD01026646;GBDJ01139466;XM_005386229;XM_005386232;XM_013514942;XM_013514943;XM_013514945;XM_013514946;XM_013514947;XM_013514948;XM_013514949 XP_005386286;XP_005386289;XP_013370396;XP_013370397;XP_013370399;XP_013370400;XP_013370401;XP_013370402;XP_013370403 MODEL 8935941 pseudo LOC102018475 60S ribosomal protein L21 pseudogene NW_004955408 8362648 8363163 + 102018475 AGCD01008216 MODEL 9001773 protein-coding Proser1 proline and serine rich 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955431 7288594 7314393 + 102018756 AGCD01030083;AGCD01030084;GBBH01192909;GBDF01277260;XM_005387643 XP_005387700 MODEL 9061083 pseudo LOC102022533 mitogen-activated protein kinase 1-like NW_004955524 298974 300265 + 102022533 AGCD01068675 MODEL 730469108 snorna SNORA25 Small nucleolar RNA SNORA25 8947444 pseudo LOC102011024 cyclin-G1-like NW_004955505 3590543 3591876 + 102011024 AGCD01065032 MODEL 8982540 pseudo LOC102016499 serine/threonine/tyrosine-interacting protein pseudogene NW_004955427 8873238 8884585 + 102016499 AGCD01027080 MODEL 8822599 ncrna LOC102011444 uncharacterized LOC102011444 NW_004955417 7040994 7068069 - 102011444 AGCD01017997;GBDF01260563;XR_260460 MODEL 8742920 ncrna LOC102010261 uncharacterized LOC102010261 NW_004955482 6580525 6586861 - 102010261 AGCD01057403;XR_263839 MODEL 8843694 pseudo LOC102006412 uncharacterized LOC102006412 NW_004955450 9656148 9662906 + 102006412 AGCD01042594 MODEL 8736725 pseudo LOC102008308 40S ribosomal protein SA pseudogene NW_004955414 6235311 6236262 - 102008308 AGCD01014914;XR_260239 MODEL 8769513 pseudo LOC102004991 UDP-glucuronosyltransferase 2B4-like NW_004955447 3992156 4014487 + 102004991 AGCD01040695;AGCD01040696;AGCD01040697;XM_005392810 MODEL 9053708 protein-coding Ppp2r5c protein phosphatase 2 regulatory subunit B'gamma ENCODES a protein that exhibits peptidase activity (ortholog); protein phosphatase regulator activity (ortholog); INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Ataxia (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN chromosome, centromeric region (ortholog); membrane (ortholog); nucleoplasm (ortholog) NW_004955538 1233511 1363956 + 102022745 AGCD01071054;AGCD01071055;AGCD01071056;GBCE01075191;GBDF01002398;XM_013507826 XP_013363280 MODEL 8801295 ncrna LOC102013456 uncharacterized LOC102013456 NW_004955559 488549 488991 + 102013456 AGCD01073587;GBDF01109206;XR_264993 MODEL 8911878 pseudo LOC102006051 cyclin-G1 pseudogene NW_004955427 21210303 21211288 - 102006051 AGCD01027434 MODEL 8933148 protein-coding LOC102007544 seminal plasma acrosin inhibitor A1-like NW_004955415 5997416 6041627 + 102007544 AGCD01016005;AGCD01016006;AGCD01016007;AGCD01016008;AGCD01016009;GBDJ01337989;XM_005380645;XM_005380648;XM_005380649;XM_013512381;XM_013512382;XM_013512383;XM_013512384;XM_013512385 XP_005380702;XP_005380705;XP_005380706;XP_013367835;XP_013367836;XP_013367837;XP_013367838;XP_013367839 MODEL 8834064 protein-coding Tlx2 T cell leukemia homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN enteric nervous system development (ortholog); mesoderm formation (ortholog); negative regulation of dendrite morphogenesis (ortholog); ASSOCIATED WITH intestinal pseudo-obstruction (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955424 11269426 11275200 - 102021364 AGCD01024559;AGCD01024560;GBDF01120108;XM_005385483 XP_005385540 MODEL 8730030 protein-coding Sh2d6 SH2 domain containing 6 ASSOCIATED WITH stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955424 2040012 2047142 - 102003463 AGCD01024261;GBDI01143647;XM_013514583 XP_013370037 MODEL 10301193 ncrna LOC106147512 uncharacterized LOC106147512 NW_004955571 789881 832257 + 106147512 AGCD01074860;GBBH01171690;XR_001232438 MODEL 39133396 snrna U4 U4 spliceosomal RNA 8766280 pseudo LOC102009073 uncharacterized LOC102009073 NW_004955422 6052412 6078239 - 102009073 AGCD01022588;AGCD01022589 MODEL 8821423 protein-coding Erich4 glutamate rich 4 ASSOCIATED WITH thymoma (ortholog) NW_004955555 369918 373848 + 102018655 AGCD01073025;AGCD01073026;GBDI01212353;XM_005412351;XR_001232313 XP_005412408 MODEL 626189168 snorna snoU109 Small nucleolar RNA U109 8710151 ncrna LOC102019985 uncharacterized LOC102019985 NW_004955409 34993912 35001323 - 102019985 AGCD01010413;GBDF01176152;XR_259802 MODEL 8998574 protein-coding Lrguk leucine rich repeats and guanylate kinase domain containing INVOLVED IN axoneme assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); manchette (ortholog) NW_004955410 33753411 33870512 - 102004461 AGCD01011386;AGCD01011387;AGCD01011388;GBBH01180243;XM_005377538;XM_013510670;XM_013510671;XM_013510673 XP_005377595;XP_013366124;XP_013366125;XP_013366127 MODEL 9027773 protein-coding Slc41a2 solute carrier family 41 member 2 ENCODES a protein that exhibits transmembrane transporter activity (ortholog); INVOLVED IN cobalt ion transport (ortholog); iron ion transport (ortholog); magnesium ion transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955405 39181396 39280789 - 102014318 AGCD01005496;AGCD01005497;AGCD01005498;GBDF01082692;XM_005374599;XM_005374600;XM_005374601;XM_005374602;XM_005374603;XM_013518965 XP_005374656;XP_005374657;XP_005374658;XP_005374659;XP_005374660;XP_013374419 MODEL 8720025 protein-coding Puf60 poly(U) binding splicing factor 60 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH alopecia (ortholog); amblyopia (ortholog); anisometropia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955454 2482968 2497339 - 102014866 AGCD01045022;GBDK01022705;XM_005395816;XM_005395817;XM_005395818;XM_013520058;XM_013520059;XM_013520060 XP_005395873;XP_005395874;XP_005395875;XP_013375512;XP_013375513;XP_013375514 MODEL 8899007 protein-coding Ca11 carbonic anhydrase 11 (inactive) ENCODES a protein that exhibits neurexin family protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); FOUND IN basolateral plasma membrane (ortholog) NW_004955559 1910421 1914988 + 102006719 AGCD01073681;GBDI01170586;XM_005412940 XP_005412997 MODEL 9056084 protein-coding Relb RELB proto-oncogene, NF-kB subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to osmotic stress (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); atopic dermatitis (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytosol (ortholog) NW_004955555 2060533 2086229 + 102030482 AGCD01073127;AGCD01073128;AGCD01073129;GBCB01060771;GBDK01139724;XM_005412484;XM_013508745 XP_005412541;XP_013364199 MODEL 9003422 protein-coding Pi4k2b phosphatidylinositol 4-kinase type 2 beta ENCODES a protein that exhibits 1-phosphatidylinositol 4-kinase activity (ortholog); INVOLVED IN phosphatidylinositol phosphate biosynthetic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955443 19728997 19760569 - 102023401 AGCD01038634;AGCD01038635;GBCB01040316;GBDF01006217;XM_005392044;XM_013518062 XP_005392101;XP_013373516 MODEL 8959268 protein-coding Rassf2 Ras association domain family member 2 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN bone remodeling (ortholog); canonical NF-kappaB signal transduction (ortholog); homeostasis of number of cells (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); kinetochore (ortholog) NW_004955415 15500726 15542939 - 102008844 AGCD01016346;AGCD01016347;AGCD01016348;AGCD01016349;GBDI01218507;XM_005380820;XM_013512321;XM_013512322;XM_013512323;XM_013512324;XM_013512325;XM_013512326 XP_005380877;XP_013367775;XP_013367776;XP_013367777;XP_013367778;XP_013367779;XP_013367780 MODEL 8723360 ncrna LOC102011884 uncharacterized LOC102011884 NW_004955424 343712 352617 - 102011884 AGCD01024172;AGCD01024173;GBDF01052736;XR_261019 MODEL 8832308 protein-coding LOC102011445 translation initiation factor IF-2-like NW_004955418 844476 848795 + 102011445 AGCD01018691;GBDF01112395;XM_005382047 XP_005382104 MODEL 9044362 protein-coding Septin2 septin 2 ENCODES a protein that exhibits enzyme regulator activity (ortholog); identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); cytoskeleton organization (ortholog); neuron projection development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); axoneme (ortholog); cell surface (ortholog) NW_004955542 401081 444304 - 102009878 AGCD01071472;AGCD01071473;AGCD01071474;GBCC01008216;XM_005411134;XM_013508103;XM_013508104;XM_013508105;XM_013508106 XP_005411191;XP_013363557;XP_013363558;XP_013363559;XP_013363560 MODEL 8856910 protein-coding LOC102012271 HAUS augmin-like complex subunit 8 NW_004956214 17 6395 + 102012271 AGCD01079252;GBDI01323698;GBDK01356093;XM_005415178;XM_005415179;XM_005415180;XM_005415181 XP_005415235;XP_005415236;XP_005415237;XP_005415238 MODEL 8891497 protein-coding Rtn2 reticulon 2 INVOLVED IN gene expression (ortholog); intracellular protein transmembrane transport (ortholog); negative regulation of amyloid-beta formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive distal hereditary motor neuronopathy 11 (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955574 1543 11476 - 102013024 AGCD01075076;GBCB01006561;GBDJ01354782;XM_005413783 XP_005413840 MODEL 8843669 trna trnL2 tRNA-Leu MT 2643 2718 + 15822217 8704693 protein-coding Ssh3 slingshot protein phosphatase 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955422 18149846 18158257 - 102023610 AGCD01022938;GBBH01118306;XM_005384351;XM_005384352;XM_005384353 XP_005384408;XP_005384409;XP_005384410 MODEL 8940671 protein-coding LOC102006056 olfactory receptor 8J3-like NW_004955511 1507684 1508625 + 102006056 AGCD01066370;XM_005407964 XP_005408021 MODEL 730469515 snorna SNORA25 Small nucleolar RNA SNORA25 9035655 pseudo LOC102022536 melanoma-associated antigen B10-like NW_004955531 3135227 3136118 - 102022536 AGCD01070062 MODEL 8726959 protein-coding Sox2 SRY-box transcription factor 2 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN adenohypophysis development (ortholog); anatomical structure formation involved in morphogenesis (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Anophthalmia (ortholog); Ataxia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955420 10671888 10674080 + 102023039 AGCD01020783;GBBH01034135;XM_005383075 XP_005383132 MODEL 8979477 protein-coding Pomt1 protein O-mannosyltransferase 1 ENCODES a protein that exhibits dolichyl-phosphate-mannose-protein mannosyltransferase activity (ortholog); mannosyltransferase activity (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of protein O-linked glycosylation (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); FOUND IN acrosomal vesicle (ortholog); dolichyl-phosphate-mannose-protein mannosyltransferase complex (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955513 1189169 1203933 + 102021696 AGCD01066845;GBDF01007560;XM_005408363;XM_013506609;XM_013506610;XM_013506611;XM_013506612;XM_013506613 XP_005408420;XP_013362063;XP_013362064;XP_013362065;XP_013362066;XP_013362067 MODEL 9012745 ncrna LOC102019662 uncharacterized LOC102019662 NW_004955453 15591053 15595926 + 102019662 AGCD01044894;GBCB01113901;XR_262745 MODEL 8799566 protein-coding Plxna2 plexin A2 ENCODES a protein that exhibits identical protein binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); centrosome localization (ortholog); cerebellar granule cell precursor tangential migration (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955489 3914137 4116780 + 102027310 AGCD01059895;AGCD01059896;AGCD01059897;GBCE01117243;GBDI01026905;XM_005404545 XP_005404602 MODEL 8952069 protein-coding LOC102006413 60S ribosomal protein L31-like NW_004955403 19401656 19402305 + 102006413 AGCD01002125;XM_005373402 XP_005373459 MODEL 730469111 snorna SNORA43 Small nucleolar RNA SNORA43 8704192 protein-coding Ca12 carbonic anhydrase 12 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN chloride ion homeostasis (ortholog); estrous cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955450 11927730 11975553 + 102026927 AGCD01042685;GBBH01177179;XM_013518981 XP_013374435 MODEL 8830537 pseudo LOC102004994 U2 small nuclear ribonucleoprotein A' pseudogene NW_004955402 7571597 7573482 - 102004994 AGCD01000179;XR_259128 MODEL 8727317 protein-coding LOC102005703 double-strand break repair protein MRE11A-like NW_004955414 105311 171913 + 102005703 AGCD01014702;AGCD01014703;AGCD01014704;AGCD01014705;AGCD01014706;GBCE01032230;GBDF01042621;XM_013512034 XP_013367488 MODEL 8822254 protein-coding Rpl6 ribosomal protein L6 NW_004956735;NW_004955458 1;11840323 3327;11840673 +;+ 102027037 AGCD01047761;AGCD01080090;AY533226;GBCE01007044;NM_001282363 AAS59428;NP_001269292;Q6QMZ4 VALIDATED 8977572 ncrna LOC102008691 uncharacterized LOC102008691 NW_004955406 921242 942095 - 102008691 AGCD01005623;GBDF01120365;XR_001236178 MODEL 9047660 protein-coding Wfdc1 WAP four-disulfide core domain 1 INVOLVED IN negative regulation of epithelial cell proliferation (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of wound healing (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN extracellular region (ortholog) NW_004955564 22536 38091 - 102017517 AGCD01074187;GBDK01412209;XM_005413214;XM_005413215;XM_013509194;XM_013509195 XP_005413271;XP_005413272;XP_013364648;XP_013364649 MODEL 9022089 protein-coding Pla2g2e phospholipase A2 group IIE ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); calcium ion binding (ortholog); INVOLVED IN low-density lipoprotein particle remodeling (ortholog); phosphatidylcholine metabolic process (ortholog); phosphatidylglycerol metabolic process (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955452 522314 526095 - 102014971 AGCD01043815;XM_005394667 XP_005394724 MODEL 8989824 protein-coding LOC102004273 translation initiation factor IF-2 NW_004955474 427580 429704 + 102004273 AGCD01054218;GBBH01209537;XM_005401303 XP_005401360 MODEL 9026371 protein-coding LOC102003238 C-C motif chemokine 2-like NW_004955481 8924855 8926701 - 102003238 AGCD01057090;GBDK01146257;XM_005402836 XP_005402893 MODEL 9052203 ncrna LOC102018476 uncharacterized LOC102018476 NW_004955458 9702392 9709705 - 102018476 AGCD01047660;GBDI01338963;XR_001236457 MODEL 39132481 snorna SNORA70 Small nucleolar RNA SNORA70 10255180 protein-coding Proser2 proline and serine rich 2 NW_004955421 27809610 27823125 + 106148411 AGCD01022296;AGCD01022297;GBCB01022185;GBDJ01030727;XM_013513651 XP_013369105 MODEL 8702508 pseudo LOC102016500 charged multivesicular body protein 5 pseudogene NW_004955428 13744889 13782648 + 102016500 AGCD01027962;AGCD01027963 MODEL 8900333 pseudo LOC102019987 cysteine--tRNA ligase, cytoplasmic pseudogene NW_004955410 17020172 17021805 - 102019987 AGCD01010979;XR_259908 MODEL 8832307 pseudo LOC102011028 40S ribosomal protein S8 pseudogene NW_004955510 5851568 5852288 - 102011028 AGCD01066294 MODEL 9018814 protein-coding Psmd10 proteasome 26S subunit, non-ATPase 10 INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of MAPK cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955490 7825202 7832347 + 102014910 AGCD01060265;GBCE01045828;XM_005404680 XP_005404737 MODEL 8952201 protein-coding Rnf186 ring finger protein 186 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein autoubiquitination (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955452 433413 450261 - 102014106 AGCD01043812;GBCQ01101625;XM_005394665 XP_005394722 MODEL 9043072 pseudo LOC102008312 60S ribosomal protein L7 pseudogene NW_004955479 9952660 9953327 - 102008312 AGCD01056510 MODEL 39132533 snorna SNORD14 Small nucleolar RNA SNORD14 8789582 protein-coding Ppp2r5d protein phosphatase 2 regulatory subunit B'delta ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN negative regulation of peptidyl-threonine phosphorylation (ortholog); PARTICIPATES IN dopamine signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH absence epilepsy (ortholog); acne (ortholog); allergic disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); protein phosphatase type 2A complex (ortholog) NW_004955437 8968517 8987680 + 102029443 AGCD01034512;GBCE01097976;GBDF01120912;XM_005389743 XP_005389800 MODEL 9007780 protein-coding Rida reactive intermediate imine deaminase A ENCODES a protein that exhibits 2-iminobutanoate deaminase activity (ortholog); 2-iminopropanoate deaminase activity (ortholog); cation binding (ortholog); INVOLVED IN G1 to G0 transition (ortholog); kidney development (ortholog); lung development (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Experimental Liver Cirrhosis (ortholog); Experimental Liver Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) NW_004955417 13810596 13822982 - 102010482 AGCD01018191;GBDJ01312104;XM_005381848 XP_005381905 MODEL 8755608 ncrna LOC102013457 uncharacterized LOC102013457 NW_004955567 1568026 1577962 + 102013457 AGCD01074483;AGCD01074484;GBDF01014518;XR_265032 MODEL 39133567 snorna U3 Small nucleolar RNA U3 8722047 protein-coding Tlx3 T cell leukemia homeobox 3 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell fate specification (ortholog); central nervous system development (ortholog); negative regulation of neuron differentiation (ortholog); ASSOCIATED WITH breast cancer (ortholog); congenital central hypoventilation syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955408 24103123 24105292 + 102020767 AGCD01008594;XM_005376328 XP_005376385 MODEL 10253427 ncrna LOC106147513 uncharacterized LOC106147513 NW_004955572 1530953 1547959 + 106147513 AGCD01074955;GBDK01401846;XR_001232439 MODEL 8741306 protein-coding Rtn3 reticulon 3 INVOLVED IN endoplasmic reticulum tubular network formation (ortholog); endoplasmic reticulum tubular network organization (ortholog); negative regulation of amyloid-beta formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic kidney disease (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); glutamatergic synapse (ortholog) NW_004955422 21289652 21358865 - 102029871 AGCD01023114;AGCD01023115;AGCD01023116;GBDF01082603;XM_005384670;XM_013514093;XM_013514094;XM_013514095 XP_005384727;XP_013369547;XP_013369548;XP_013369549 MODEL 8902871 ncrna LOC102009080 uncharacterized LOC102009080 NW_004955502 7625008 7627557 + 102009080 AGCD01064452;GBDF01238432;XR_264267 MODEL 8997938 protein-coding Erich5 glutamate rich 5 NW_004955417 13776609 13804241 + 102009607 AGCD01018191;GBDI01354833;XM_005381845;XM_005381846 XP_005381902;XP_005381903 MODEL 8958053 protein-coding Ssmem1 serine rich single-pass membrane protein 1 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog) NW_004955479 10864515 10875033 + 102014896 AGCD01056563;AGCD01056564;GBDF01049460;XM_005402430;XM_005402431;XM_005402432 XP_005402487;XP_005402488;XP_005402489 MODEL 8708315 protein-coding LOC102006058 olfactory receptor 5D16-like NW_004955511 662118 663074 + 102006058 AGCD01066337;XM_005408204 XP_005408261 MODEL 8934062 ncrna LOC102010262 uncharacterized LOC102010262 NW_004955482 9098479 9099552 - 102010262 AGCD01057562;GBDF01226253;XR_263851 MODEL 8854509 protein-coding Trim17 tripartite motif containing 17 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN autophagy (ortholog); protein autoubiquitination (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog) NW_004955581 107251 113907 + 102011712 AGCD01075657;GBDF01052383;XM_005414229;XM_005414230;XM_005414231 XP_005414286;XP_005414287;XP_005414288 MODEL 8799652 protein-coding Pum1 pumilio RNA binding family member 1 ENCODES a protein that exhibits miRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); miRNA processing (ortholog); mRNA destabilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebellar ataxia type 47 (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) NW_004955452 9487725 9623565 - 102004033 AGCD01044238;AGCD01044239;AGCD01044240;AGCD01044241;AGCD01044242;AGCD01044243;AGCD01044244;AGCD01044245;AGCD01044246;AGCD01044247;GBCB01038506;XM_005395006;XM_005395007;XM_005395009;XM_005395011;XM_005395013;XM_005395014;XM_013519591;XM_013519592;XM_013519593;XM_013519594;XM_013519595;XM_013519596;XM_013519597 XP_005395063;XP_005395064;XP_005395066;XP_005395068;XP_005395070;XP_005395071;XP_013375045;XP_013375046;XP_013375047;XP_013375048;XP_013375049;XP_013375050;XP_013375051 MODEL 8872349 protein-coding Sox21 SRY-box transcription factor 21 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN hair cycle (ortholog); hair follicle development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog) NW_004955404 15181866 15184317 + 102020079 AGCD01003535;AGCD01003536;GBBH01186966;XM_005374233 XP_005374290 MODEL 8866730 protein-coding Pi4ka phosphatidylinositol 4-kinase alpha ENCODES a protein that exhibits 1-phosphatidylinositol 4-kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); host-mediated perturbation of viral process (ortholog); myelination in peripheral nervous system (ortholog); PARTICIPATES IN inositol metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); Golgi-associated vesicle membrane (ortholog); plasma membrane (ortholog) NW_004955442 19446955 19594790 + 102025628 AGCD01038060;AGCD01038061;AGCD01038062;AGCD01038063;AGCD01038064;AGCD01038065;AGCD01038066;AGCD01081646;GBDK01126857;XM_005391836;XM_005391837 XP_005391893;XP_005391894 MODEL 8753509 protein-coding Pomt2 protein O-mannosyltransferase 2 ENCODES a protein that exhibits dolichyl-phosphate-mannose-protein mannosyltransferase activity (ortholog); mannosyltransferase activity (ortholog); INVOLVED IN basement membrane organization (ortholog); dentate gyrus development (ortholog); positive regulation of protein O-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN dolichyl-phosphate-mannose-protein mannosyltransferase complex (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955438 1179064 1218860 - 102013869 AGCD01034976;GBDI01292675;XM_005390192;XM_005390193;XM_005390194 XP_005390249;XP_005390250;XP_005390251 MODEL 9035295 pseudo LOC102011448 60S ribosomal protein L5-like NW_004955419 28970094 28970946 - 102011448 AGCD01020481 MODEL 8702352 pseudo LOC102011889 KATNB1-like protein 1 NW_004955426 24920133 24920909 - 102011889 AGCD01026698 MODEL 730469229 snorna SNORA43 Small nucleolar RNA SNORA43 8908140 protein-coding Plxna3 plexin A3 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); INVOLVED IN axon guidance (ortholog); branchiomotor neuron axon guidance (ortholog); facial nerve structural organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog) NW_004955580 958033 972123 + 102004213 AGCD01075633;AGCD01075634;GBBH01068132;XM_005414203 XP_005414260 MODEL 9027080 protein-coding Septin3 septin 3 ENCODES a protein that exhibits GTP binding (ortholog); identical protein binding (ortholog); INVOLVED IN protein catabolic process at presynapse (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN presynapse (ortholog); presynaptic membrane (ortholog); septin complex (ortholog) NW_004955413 27381103 27400899 + 102028948 AGCD01014504;GBDJ01106595;XM_005379383;XM_005379384;XM_005379385;XM_005379386 XP_005379440;XP_005379441;XP_005379442;XP_005379443 MODEL 8976725 ncrna LOC102004995 uncharacterized LOC102004995 NW_004955403 8923034 8930408 - 102004995 AGCD01001897;AGCD01001898;GBDF01159890;XR_259164 MODEL 8784974 protein-coding LOC102007547 cystatin-C-like NW_004955415 30648683 30672114 + 102007547 AGCD01016666;GBBH01008067;XM_005380977;XM_005380978;XM_013512401;XM_013512402;XM_013512403 XP_005381034;XP_005381035;XP_013367855;XP_013367856;XP_013367857 MODEL 39133399 snrna U4 U4 spliceosomal RNA 8868588 pseudo LOC102005705 selenoprotein T pseudogene NW_004955474 8104963 8107680 + 102005705 AGCD01054542 MODEL 626189165 snorna snoU109 Small nucleolar RNA U109 8858193 protein-coding Rpl7 ribosomal protein L7 ENCODES a protein that exhibits 5S rRNA binding (ortholog); DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN cytoplasmic translation (ortholog); liver regeneration (ortholog); ribosomal large subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955444 6910818 6914047 + 102024058 AGCD01038877;AGCD01038878;GBDF01009566;XM_013518196 XP_013373650 MODEL 39131316 protein-coding WFDC1 WAP four-disulfide core domain 1 8716338 protein-coding Slc41a3 solute carrier family 41 member 3 ENCODES a protein that exhibits magnesium:sodium antiporter activity (ortholog); INVOLVED IN mitochondrial magnesium ion transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); plasma membrane (ortholog) NW_004955421 21349484 21407171 - 102017779 AGCD01022107;AGCD01022108;GBCQ01151305;XM_005383826;XM_005383827;XM_005383828;XM_005383829;XM_013513732 XP_005383883;XP_005383884;XP_005383885;XP_005383886;XP_013369186 MODEL 730469481 snorna SNORA25 Small nucleolar RNA SNORA25 39132467 snorna SNORA70 Small nucleolar RNA SNORA70 8794988 protein-coding Proser3 proline and serine rich 3 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog) NW_004955468 2786736 2796851 - 102023137 AGCD01051838;GBDI01293635;XM_013522290 XP_013377744 MODEL 8749689 protein-coding Rassf3 Ras association domain family member 3 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955458 11400655 11451796 + 102008825 AGCD01047749;AGCD01047750;GBBH01209336;GBDI01147576;XM_005397534 XP_005397591 MODEL 8867422 pseudo LOC102019667 caprin-1 pseudogene NW_004955407 32716950 32719033 - 102019667 AGCD01007680 MODEL 8982386 protein-coding LOC102010274 cationic trypsin NW_004955494 1011732 1014914 - 102010274 AGCD01061390;XM_005405392 XP_005405449 MODEL 8876101 protein-coding Psmd11 proteasome 26S subunit, non-ATPase 11 INVOLVED IN proteasome assembly (ortholog); stem cell differentiation (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) NW_004955481 7364543 7402770 + 102027185 AGCD01057061;AGCD01057062;AGCD01057063;GBDF01050146;XM_005402826;XM_013503426 XP_005402883;XP_013358880 MODEL 8717861 ncrna LOC102012280 uncharacterized LOC102012280 NW_004955455 541374 542760 - 102012280 AGCD01045560;GBDF01021764;XR_262806 MODEL 39132546 snorna SNORD14 Small nucleolar RNA SNORD14 8716118 protein-coding LOC102008692 olfactory receptor 5P3-like NW_004955453 4970345 4985354 - 102008692 AGCD01044701;XM_013519758 XP_013375212 MODEL 8878475 ncrna LOC102004276 uncharacterized LOC102004276 NW_004955476 10952695 10958599 + 102004276 AGCD01055432;AGCD01055433;GBDF01093785;XR_001230793;XR_263644 MODEL 9000648 pseudo LOC102003239 coiled-coil domain-containing protein 90B, mitochondrial pseudogene NW_004955481 173004 173995 - 102003239 AGCD01056783 MODEL 8879916 protein-coding Lrif1 ligand dependent nuclear receptor interacting factor 1 INVOLVED IN dosage compensation by inactivation of X chromosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); facioscapulohumeral muscular dystrophy 3 (ortholog); FOUND IN Barr body (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955435 14467123 14485109 - 102021479 AGCD01033234;GBDJ01262130;XM_005388933;XM_005388935 XP_005388990;XP_005388992 MODEL 8925763 pseudo LOC102018480 nucleosome assembly protein 1-like 1 pseudogene NW_004955411 3844425 3845502 - 102018480 AGCD01011556 MODEL 39133401 snrna U4 U4 spliceosomal RNA 8708051 ncrna LOC102022541 uncharacterized LOC102022541 NW_004955538 1159133 1176031 - 102022541 AGCD01071047;AGCD01071048;AGCD01071049;AGCD01071050;GBDF01044132;XR_001232085;XR_001232086;XR_264795 MODEL 9004722 protein-coding Rtn4 reticulon 4 ENCODES a protein that exhibits cadherin binding (ortholog); lipid binding (ortholog); metal ion binding (ortholog); INVOLVED IN axonal fasciculation (ortholog); blastocyst formation (ortholog); cardiac epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN anchoring junction (ortholog); axon (ortholog); cell junction (ortholog) NW_004955424 28061346 28125838 + 102013429 AGCD01025146;AGCD01025147;GBCQ01010590;XM_013514627 XP_013370081 MODEL 8740586 pseudo LOC102019991 eukaryotic translation initiation factor 2 subunit 2 pseudogene NW_004955464 6397755 6398993 + 102019991 AGCD01050025 MODEL 8904957 protein-coding Ssna1 SS nuclear autoantigen 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN axon arborization (ortholog); axon extension (ortholog); axonogenesis (ortholog); ASSOCIATED WITH sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uveal melanoma (ortholog); FOUND IN axon (ortholog); axoneme (ortholog); centriole (ortholog) NW_004955513 5194308 5195721 + 102004413 AGCD01066961;GBCQ01066502;XM_005408581 XP_005408638 MODEL 8764958 ncrna LOC102008318 uncharacterized LOC102008318 NW_004955484 4122273 4129579 - 102008318 AGCD01058202;GBDF01081938;XR_263880;XR_263882 MODEL 8979767 protein-coding Sh2d7 SH2 domain containing 7 ASSOCIATED WITH thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955450 650339 660567 + 102007289 AGCD01042340;AGCD01042341;GBBH01112313;XM_013518895 XP_013374349 MODEL 8911057 protein-coding Ca13 carbonic anhydrase 13 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytosol (ortholog); myelin sheath (ortholog) NW_004955417 3194961 3219019 + 102003867 AGCD01017907;GBDJ01132278;XM_005381741 XP_005381798 MODEL 8756539 protein-coding Spmip4 sperm microtubule inner protein 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN centrosome (ortholog) NW_004955410 27105104 27138654 - 102024536 AGCD01011209;GBCQ01155117;XM_005377430;XM_005377431 XP_005377487;XP_005377488 MODEL 8799638 trna trnM(cat) tRNA-Met MT 3818 3886 + 15822219 39133678 snorna U3 Small nucleolar RNA U3 8773245 protein-coding Pon1 paraoxonase 1 ENCODES a protein that exhibits acyl-L-homoserine-lactone lactonohydrolase activity (ortholog); aryldialkylphosphatase activity (ortholog); arylesterase activity (ortholog); INVOLVED IN carboxylic acid catabolic process (ortholog); cholesterol metabolic process (ortholog); lactone catabolic process (ortholog); PARTICIPATES IN clopidogrel pharmacodynamics pathway; clopidogrel pharmacokinetics pathway; organophosphate response pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN extracellular region (ortholog); high-density lipoprotein particle (ortholog); spherical high-density lipoprotein particle (ortholog) NW_004955432 11893473 11923035 - 102016942 AGCD01030957;GBBH01000456;XM_005388060;XM_005388062 XP_005388117;XP_005388119 MODEL 8914700 protein-coding Ppp2r5e protein phosphatase 2 regulatory subunit B'epsilon ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); Chromosomal Instability (ortholog); FOUND IN cytosol (ortholog); protein phosphatase type 2A complex (ortholog) NW_004955466 6263338 6420685 + 102008518 AGCD01050923;AGCD01050924;AGCD01050925;AGCD01050926;AGCD01050927;GBDF01126130;XM_005399153;XM_005399154;XM_013521973 XP_005399210;XP_005399211;XP_013377427 MODEL 9064714 protein-coding Pla2g2f phospholipase A2 group IIF ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); negative regulation of T cell proliferation (ortholog); phosphatidylcholine acyl-chain remodeling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); urinary bladder cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955452 755738 765304 + 102017295 AGCD01043827;GBDF01118116;XM_005394676;XM_013519448 XP_005394733;XP_013374902 MODEL 9046582 protein-coding Plxna4 plexin A4 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); axon guidance (ortholog); branchiomotor neuron axon guidance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog) NW_004955410 35281042 35714094 + 102006641 AGCD01011410;AGCD01011411;AGCD01011412;AGCD01011413;GBDF01057223;XM_005377544;XM_005377545;XM_013510647 XP_005377601;XP_005377602;XP_013366101 MODEL 9036195 protein-coding LOC102016502 vomeronasal type-1 receptor 90-like NW_004955429 12270196 12271125 - 102016502 AGCD01028709;XM_005387243 XP_005387300 MODEL 8757362 pseudo LOC102009081 transcription factor CP2-like protein 1 pseudogene NW_004955503 2232097 2233831 + 102009081 AGCD01064604 MODEL 8909928 protein-coding Rnf187 ring finger protein 187 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of DNA-templated transcription (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955581 74876 82915 - 102021818 AGCD01075656;AGCD01075657;GBCB01085848;GBCE01081698;XM_013509721 XP_013365175 MODEL 8780668 ncrna LOC102006062 uncharacterized LOC102006062 NW_004955432 9620240 9642499 + 102006062 AGCD01030909;XR_261520 MODEL 8741438 protein-coding LOC102006414 uncharacterized LOC102006414 NW_004956036 9 5036 + 102006414 AGCD01078919;XM_005415164 XP_005415221 MODEL 8795536 protein-coding LOC102011029 chromosome unknown open reading frame, human C10orf67 ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955429 5674076 5798289 + 102011029 AGCD01028531;AGCD01028532;AGCD01028533;AGCD01028534;AGCD01028535;AGCD01028536;GBDF01127753;XM_013515364 XP_013370818 MODEL 8746965 protein-coding Rpl7a ribosomal protein L7a ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cellular response to Thyroid stimulating hormone (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) NW_004955513 2703765 2707803 + 102011895 AGCD01066886;GBDF01149194;XM_013506575 XP_013362029 MODEL 8731343 protein-coding Wfdc2 WAP four-disulfide core domain 2 ENCODES a protein that exhibits aspartic-type endopeptidase inhibitor activity (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN club cell differentiation (ortholog); lung vasculature development (ortholog); positive regulation of lung alveolus development (ortholog); ASSOCIATED WITH Bronchiectasis and Nasal Polyposis (ortholog); Experimental Liver Cirrhosis (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955445 11723634 11730304 - 102004654 AGCD01039714;GBDF01122565;XM_005392423;XM_013518349 XP_005392480;XP_013373803 MODEL 8890756 protein-coding Slc43a1 solute carrier family 43 member 1 ENCODES a protein that exhibits L-amino acid transmembrane transporter activity (ortholog); L-isoleucine transmembrane transporter activity (ortholog); L-leucine transmembrane transporter activity (ortholog); INVOLVED IN isoleucine transport (ortholog); L-amino acid transport (ortholog); L-leucine transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955511 2474173 2490508 - 102017592 AGCD01066408;GBDJ01234525;XM_005407995;XM_013506490;XM_013506491;XM_013506492;XM_013506493 XP_005408052;XP_013361944;XP_013361945;XP_013361946;XP_013361947 MODEL 8982157 protein-coding Trim2 tripartite motif containing 2 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH axonal neuropathy (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955471 7523895 7698436 + 102029852 AGCD01053154;AGCD01053155;AGCD01053156;AGCD01053157;AGCD01053158;AGCD01053159;AGCD01053160;GBCQ01127466;XM_005400911;XM_005400912;XM_005400913;XM_005400914;XM_005400915;XM_005400916;XM_005400917;XM_005400918;XM_005400920;XM_005400921;XM_013522895;XM_013522896 XP_005400968;XP_005400969;XP_005400970;XP_005400971;XP_005400972;XP_005400973;XP_005400974;XP_005400975;XP_005400977;XP_005400978;XP_013378349;XP_013378350 MODEL 730469152 misc_rna SOX2OT_exon1 SOX2 overlapping transcript exon 1 8862318 protein-coding Pum2 pumilio RNA binding family member 2 ENCODES a protein that exhibits lncRNA binding (ortholog); miRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN adipose tissue development (ortholog); chromosome organization (ortholog); hair follicle development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955469 2810825 2886911 - 102013072 AGCD01052285;AGCD01052286;AGCD01052287;AGCD01052288;GBDK01194835;XM_005400344;XM_005400346;XM_005400350;XM_013522625;XM_013522626;XM_013522627;XM_013522628;XM_013522629;XM_013522630;XM_013522631 XP_005400401;XP_005400403;XP_005400407;XP_013378079;XP_013378080;XP_013378081;XP_013378082;XP_013378083;XP_013378084;XP_013378085 MODEL 8883865 pseudo LOC102011451 uncharacterized LOC102011451 NW_004955421 28537400 28548971 - 102011451 AGCD01022331 MODEL 8773794 protein-coding Pi4kb phosphatidylinositol 4-kinase beta ENCODES a protein that exhibits 1-phosphatidylinositol 4-kinase activity (ortholog); 14-3-3 protein binding (ortholog); INVOLVED IN inner ear development (ortholog); lysosome organization (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant nonsyndromic deafness 87 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasmic side of trans-Golgi network membrane (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955588 648180 679374 - 102030020 AGCD01076118;GBCC01025771;XM_005414515;XM_005414516;XM_013509921;XM_013509922 XP_005414572;XP_005414573;XP_013365375;XP_013365376 MODEL 9030090 protein-coding Rif1 replication timing regulatory factor 1 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); DNA damage response (ortholog); negative regulation of double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955440 16977710 17047809 + 102019327 AGCD01036555;AGCD01036556;AGCD01036557;AGCD01036558;GBDF01086865;XM_013517488 XP_013372942 MODEL 8995744 ncrna LOC102011891 uncharacterized LOC102011891 NW_004955429 17730248 17732306 - 102011891 AGCD01028865;GBDF01041050;XR_261353 MODEL 730469314 snorna SNORA43 Small nucleolar RNA SNORA43 8946988 ncrna LOC102012281 uncharacterized LOC102012281 NW_004955456 10060816 10063097 + 102012281 AGCD01046517;GBDF01293625;XR_262891 MODEL 8739337 ncrna LOC102005707 uncharacterized LOC102005707 NW_004955478 5365809 5429517 + 102005707 AGCD01055871;AGCD01055872;GBDF01254563;XR_001230866;XR_263698 MODEL 39132560 snorna SNORD14 Small nucleolar RNA SNORD14 9025974 protein-coding Septin4 septin 4 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); flagellated sperm motility (ortholog); hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH Lewy body dementia (ortholog); Parkinson's disease (ortholog); spermatogenic failure 99 (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cytoplasm (ortholog) NW_004955451 4505318 4530387 + 102022448 AGCD01043128;GBDF01047745;XM_005394007;XM_005394008;XM_005394009;XM_005394010;XM_005394011;XM_005394014 XP_005394064;XP_005394065;XP_005394066;XP_005394067;XP_005394068;XP_005394071 MODEL 8816627 protein-coding Tm2d1 TM2 domain containing 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955423 27639192 27669907 + 102013517 AGCD01024136;GBCB01002952;XM_013514531 XP_013369985 MODEL 9050442 protein-coding Psmd12 proteasome 26S subunit, non-ATPase 12 ASSOCIATED WITH amblyopia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) NW_004955478 6536207 6558156 - 102010055 AGCD01055900;GBCB01003349;XM_005402153 XP_005402210 MODEL 730468991 snorna snoU109 Small nucleolar RNA U109 8772730 protein-coding Relch RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing INVOLVED IN intracellular cholesterol transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN recycling endosome (ortholog); trans-Golgi network (ortholog) NW_004955402 46114835 46226330 + 102019972 AGCD01001151;AGCD01001152;AGCD01001153;AGCD01001154;GBDK01224883;XM_005373018;XM_005373019;XM_013511190;XM_013511192;XM_013511197;XR_001232916 XP_005373075;XP_005373076;XP_013366644;XP_013366646;XP_013366651 MODEL 8936920 pseudo LOC102008707 retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta pseudogene NW_004955411 1587497 1587967 + 102008707 AGCD01011485;XM_005377918 MODEL 39133403 snrna U4 U4 spliceosomal RNA 9044467 protein-coding Rassf4 Ras association domain family member 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955546 2277679 2307877 + 102013876 AGCD01072084;GBDF01073498;XM_005411784;XM_005411785 XP_005411841;XP_005411842 MODEL 8916565 ncrna LOC102006417 uncharacterized LOC102006417 NW_004955404 45816780 45821911 + 102006417 AGCD01004453;GBDF01094431;XR_259341 MODEL 8883953 protein-coding LOC102013462 uncharacterized LOC102013462 NW_004955402 4568211 4580597 + 102013462 AGCD01000124;AGCD01000125;GBBH01104032;XM_013518141 XP_013373595 MODEL 8991588 protein-coding Prox1 prospero homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA binding domain binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN acinar cell differentiation (ortholog); aorta smooth muscle tissue morphogenesis (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); esophageal cancer (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955406 3715140 3770019 - 102012922 AGCD01005674;GBCQ01174906;XM_005374720;XM_005374721;XM_005374722;XM_005374723;XM_013519987 XP_005374777;XP_005374778;XP_005374779;XP_005374780;XP_013375441 MODEL 8773914 protein-coding LOC102010275 fer-1-like protein 4 NW_004955422 25848531 25882747 + 102010275 AGCD01023269;GBCQ01116103;XM_013514202 XP_013369656 MODEL 10311497 protein-coding LOC106147514 mucin-12-like NW_004955573 15843 45121 - 106147514 AGCD01074957;AGCD01074958;GBDJ01421515;XM_013509446;XM_013509447 XP_013364900;XP_013364901 MODEL 8815403 protein-coding Pianp PILR alpha associated neural protein ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN cerebellum development (ortholog); dentate gyrus development (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); presynapse (ortholog) NW_004955413 4309104 4314961 - 102026734 AGCD01013604;GBDF01145709;XM_005378816;XM_005378817;XM_013511343 XP_005378873;XP_005378874;XP_013366797 MODEL 9054832 ncrna LOC102004278 uncharacterized LOC102004278 NW_004955480 4530020 4536073 + 102004278 AGCD01056642;GBDF01146524;XR_263743 MODEL 8723910 pseudo LOC102003240 bridging integrator 2-like NW_004955418 22080594 22081909 - 102003240 AGCD01019279 MODEL 730469476 snorna SNORA25 Small nucleolar RNA SNORA25 8817193 protein-coding Lrig1 leucine rich repeats and immunoglobulin like domains 1 INVOLVED IN hair cycle process (ortholog); innervation (ortholog); otolith morphogenesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955421 21108609 21219293 + 102006585 AGCD01022104;AGCD01022105;AGCD01022106;GBBH01065474;GBDJ01088361;XM_013513717 XP_013369171 MODEL 39132570 snorna SNORD14 Small nucleolar RNA SNORD14 8959528 protein-coding LOC102022542 uncharacterized protein DDB_G0290301-like NW_004955539 3415874 3417143 + 102022542 AGCD01071252;GBDF01156883;XM_005410907 XP_005410964 MODEL 9059472 protein-coding LOC102019992 arginyl-tRNA--protein transferase 1-like NW_004955411 24882254 24883938 - 102019992 AGCD01012140;XM_013510718 XP_013366172 MODEL 8917369 protein-coding Sspn sarcospan ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN plasma membrane (ortholog); sarcolemma (ortholog); transport vesicle (ortholog) NW_004955413 21174242 21212813 + 102004591 AGCD01014247;AGCD01014248;GBCB01003015;XM_013511398 XP_013366852 MODEL 39131327 protein-coding RNF187 ring finger protein 187 9029381 protein-coding Rtn4ip1 reticulon 4 interacting protein 1 ENCODES a protein that exhibits NADH dehydrogenase (quinone) (non-electrogenic) activity (ortholog); NADPH dehydrogenase (quinone) activity (ortholog); INVOLVED IN regulation of dendrite development (ortholog); ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); autistic disorder (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955411 31902848 31950645 - 102007315 AGCD01012289;GBCQ01127142;XM_005377832 XP_005377889 MODEL 8707690 ncrna LOC102004996 uncharacterized LOC102004996 NW_004955451 5008763 5013506 + 102004996 AGCD01043159;GBDF01208277;XR_001235984;XR_262579 MODEL 39133679 snorna U3 Small nucleolar RNA U3 8976659 trna trnN(gtt) tRNA-Asn MT 5085 5157 - 15822222 9046024 protein-coding Trim21 tripartite motif containing 21 ENCODES a protein that exhibits identical protein binding (ortholog); transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); negative regulation of innate immune response (ortholog); negative regulation of protein deubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleus (ortholog) NW_004955414 20066109 20077331 - 102014130 AGCD01015355;GBCQ01032815;XM_005380044;XM_005380045;XR_001233160 XP_005380101;XP_005380102 MODEL 9007798 pseudo LOC102011459 ATP synthase F(0) complex subunit B1, mitochondrial pseudogene NW_004955424 20453388 20454636 + 102011459 AGCD01024856 MODEL 8771278 protein-coding Sh3bgr SH3 domain binding glutamate rich protein NW_004955407 38225827 38265792 + 102026294 AGCD01007799;AGCD01007800;AGCD01007801;AGCD01007802;AGCD01007803;GBCQ01164597;XM_005375770;XM_005375771;XM_005375772 XP_005375827;XP_005375828;XP_005375829 MODEL 8806191 protein-coding Erich6 glutamate rich 6 ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955448 1827296 1860699 - 102025958 AGCD01041270;GBDF01054023;XM_005393013;XM_013518579 XP_005393070;XP_013374033 MODEL 8884942 protein-coding Rassf5 Ras association domain family member 5 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of protein ubiquitination (ortholog); regulation of protein localization to nucleus (ortholog); ASSOCIATED WITH Kidney Neoplasms (ortholog); lung cancer (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955406 42086081 42159204 + 102019359 AGCD01006696;AGCD01006697;GBBH01164625;XM_005375394;XM_005375396 XP_005375451;XP_005375453 MODEL 8815042 protein-coding LOC102010276 uncharacterized LOC102010276 NW_004955494 4605410 4658564 - 102010276 AGCD01061508;AGCD01061509;XM_013504923 XP_013360377 MODEL 8765934 protein-coding Ppp3ca protein phosphatase 3 catalytic subunit alpha ENCODES a protein that exhibits ATPase binding (ortholog); calcium-dependent protein serine/threonine phosphatase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN calcineurin-mediated signaling (ortholog); calcineurin-NFAT signaling cascade (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcineurin signaling pathway; dopamine signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); Arthrogryposis, Cleft Palate, Craniosynostosis, and Impaired Intellectual Development (ortholog); FOUND IN calcineurin complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955496 6934542 7059745 + 102019410 AGCD01062372;GBCB01004825;GBCQ01066605;XM_013505393 XP_013360847 MODEL 8756375 ncrna LOC102018485 uncharacterized LOC102018485 NW_004955468 12167937 12170801 - 102018485 AGCD01052145;GBCQ01188108;XR_001236937;XR_263417 MODEL 9029295 protein-coding Pla2g3 phospholipase A2 group III ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); glycerophospholipase activity (ortholog); INVOLVED IN acrosome assembly (ortholog); cell development (ortholog); cell maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); essential tremor (ortholog); FOUND IN centriole (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955455 5314520 5320151 - 102004676 AGCD01045720;GBCC01027921;XM_005396297;XM_013520479;XM_013520480 XP_005396354;XP_013375933;XP_013375934 MODEL 39132455 snorna SNORA70 Small nucleolar RNA SNORA70 8893532 protein-coding Septin5 septin 5 NW_004955442 18361072 18369648 - 102006399 AGCD01038004;GBCE01030386;XM_005391774;XM_013517956;XM_013517957;XM_013517958;XM_013517959;XM_013517960 XP_005391831;XP_013373410;XP_013373411;XP_013373412;XP_013373413;XP_013373414 MODEL 8757763 protein-coding Plxnb1 plexin B1 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN inhibitory synapse assembly (ortholog); negative regulation of cell adhesion (ortholog); negative regulation of osteoblast proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955532 471652 499525 - 102024379 AGCD01070126;AGCD01070127;GBDI01012767;XM_005410146;XM_005410147;XM_013507607 XP_005410203;XP_005410204;XP_013363061 MODEL 8782229 protein-coding LOC102016503 cytochrome b ascorbate-dependent protein 3 ENCODES a protein that exhibits transmembrane ascorbate ferrireductase activity (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN late endosome membrane (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) NW_004955511 6191644 6200099 + 102016503 AGCD01066598;GBDF01121158;XM_005408161;XM_005408162 XP_005408218;XP_005408219 MODEL 8750355 protein-coding Rell1 RELT like 1 INVOLVED IN positive regulation of p38MAPK cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955443 9461570 9526986 + 102009997 AGCD01038357;GBCE01152742;XM_005392010;XM_013518114 XP_005392067;XP_013373568 MODEL 8928626 ncrna LOC102009084 uncharacterized LOC102009084 NW_004955427 14231272 14244398 + 102009084 AGCD01027268;GBBH01218259;XR_261275 MODEL 8824360 protein-coding Rpl7l1 ribosomal protein L7 like 1 INVOLVED IN blastocyst formation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog); nucleolus (ortholog) NW_004955437 8903274 8916598 + 102024844 AGCD01034506;AGCD01034507;GBDF01048743;XM_005389726;XM_013517110 XP_005389783;XP_013372564 MODEL 8958685 protein-coding LOC102019673 myosin-6 NW_004955409 36932705 36955373 + 102019673 AGCD01010484;GBDJ01229901;XM_005377074 XP_005377131 MODEL 9017552 ncrna LOC102008323 uncharacterized LOC102008323 NW_004955421 4100911 4102982 - 102008323 AGCD01021680;GBDF01307160;XR_260787 MODEL 8753609 protein-coding Ca14 carbonic anhydrase 14 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955413 510089 516892 - 102018174 AGCD01013472;GBCB01024067;XM_005378696;XM_005378697;XM_013511467 XP_005378753;XP_005378754;XP_013366921 MODEL 8958421 ncrna LOC102007549 uncharacterized LOC102007549 NW_004955480 6536847 6538193 - 102007549 AGCD01056685;GBDJ01269916;XR_263745 MODEL 8784868 protein-coding Wfdc3 WAP four-disulfide core domain 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lung cancer (ortholog) NW_004955445 11501044 11512109 + 102029675 AGCD01039697;AGCD01039698;GBDF01119525;XM_005392415;XM_005392416;XM_005392418;XM_013518337;XM_013518339 XP_005392472;XP_005392473;XP_005392475;XP_013373791;XP_013373793 MODEL 9044461 protein-coding LOC102013464 cyclin-dependent kinase inhibitor 1C-like NW_004958204 12 1007 - 102013464 AGCD01081600;GBBH01041050;GBCQ01066908;XM_005415240 XP_005415297 MODEL 8729416 pseudo LOC102006418 biorientation of chromosomes in cell division protein 1 pseudogene NW_004955452 7619927 7620452 - 102006418 AGCD01044178 MODEL 8748329 protein-coding Pon2 paraoxonase 2 ENCODES a protein that exhibits acyl-L-homoserine-lactone lactonohydrolase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN lactone catabolic process (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); FOUND IN plasma membrane (ortholog) NW_004955432 11988009 12020702 - 102018011 AGCD01030958;AGCD01030959;AGCD01030960;GBBH01032040;XM_005388064 XP_005388121 MODEL 8981889 protein-coding Prox2 prospero homeobox 2 ASSOCIATED WITH melanoma (ortholog); sarcoma (ortholog) NW_004955523 697475 708675 + 102016410 AGCD01068476;GBDF01279087;XM_005409386 XP_005409443 MODEL 9038875 ncrna LOC102005710 uncharacterized LOC102005710 NW_004955418 22750893 22756659 + 102005710 AGCD01019292;XR_260582 MODEL 8865639 protein-coding LOC102011892 olfactory receptor 9G4 NW_004955511 1843967 1844917 - 102011892 AGCD01066381;XM_005407980 XP_005408037 MODEL 730469084 snorna snoU18 Small nucleolar RNA U18 9035824 protein-coding Tm2d2 TM2 domain containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955463 14537902 14545147 - 102028728 AGCD01049912;GBCC01027748;XM_005398462;XR_001236652 XP_005398519 MODEL 8889435 protein-coding Psmd13 proteasome 26S subunit, non-ATPase 13 INVOLVED IN meiosis I (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) NW_004955476 11782461 11794839 - 102029619 AGCD01055474;GBDJ01072396;XM_005401886 XP_005401943 MODEL 8868705 ncrna LOC102008709 uncharacterized LOC102008709 NW_004955412 20482901 20493630 + 102008709 AGCD01013009;GBDF01240677;XR_001232902;XR_001232903;XR_260004 MODEL 39133405 snrna U4 U4 spliceosomal RNA 9022800 protein-coding LOC102011031 odorant-binding protein 2b-like NW_004955513 2641785 2645058 + 102011031 AGCD01066883;GBBH01003721;XM_005408423;XM_013506570 XP_005408480;XP_013362024 MODEL 730469460 misc_rna SOX2OT_exon2 SOX2 overlapping transcript exon 2 8724894 protein-coding Slc43a2 solute carrier family 43 member 2 ENCODES a protein that exhibits L-amino acid transmembrane transporter activity (ortholog); L-isoleucine transmembrane transporter activity (ortholog); L-leucine transmembrane transporter activity (ortholog); INVOLVED IN isoleucine transport (ortholog); L-amino acid transport (ortholog); L-leucine transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955481 1550289 1597213 + 102019390 AGCD01056836;AGCD01056837;AGCD01056838;GBDF01222975;XM_005402617;XM_005402618;XM_013503413 XP_005402674;XP_005402675;XP_013358867 MODEL 8985698 protein-coding Pum3 pumilio RNA binding family member 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); endoplasmic reticulum (ortholog); nucleolus (ortholog) NW_004955434 7208319 7245324 - 102019197 AGCD01032231;GBDK01357572;XM_005388614;XM_005388615;XM_013516375 XP_005388671;XP_005388672;XP_013371829 MODEL 8980039 protein-coding Sspo SCO-spondin PARTICIPATES IN Hedgehog signaling pathway; mTOR signaling pathway; Notch signaling pathway; FOUND IN cytoplasm (ortholog) NW_004955491 4840657 4889060 + 102016717 AGCD01060464;AGCD01060465;GBDK01109654;XM_005404761 XP_005404818 MODEL 8764564 protein-coding Rtn4r reticulon 4 receptor ENCODES a protein that exhibits chondroitin sulfate binding (ortholog); ganglioside GM1 binding (ortholog); ganglioside GT1b binding (ortholog); INVOLVED IN axonogenesis (ortholog); cell surface receptor signaling pathway (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); schizophrenia (ortholog); FOUND IN axonal growth cone (ortholog); cell surface (ortholog); dendritic shaft (ortholog) NW_004955442 17866508 17891803 + 102021054 AGCD01037988;GBCE01016565;XM_005391722 XP_005391779 MODEL 9055693 protein-coding LOC102012282 uroplakin-3b-like protein NW_004955456 15093798 15098628 + 102012282 AGCD01046662;GBDJ01177525;XM_005396824;XM_013520654 XP_005396881;XP_013376108 MODEL 8911052 trna trnP(tgg) tRNA-Pro MT 15374 15440 - 15822235 8737717 protein-coding Trim23 tripartite motif containing 23 ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN positive regulation of autophagy (ortholog); positive regulation of protein modification process (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi membrane (ortholog); lysosomal membrane (ortholog) NW_004955446 3480177 3509050 + 102019968 AGCD01040020;AGCD01040021;AGCD01040022;GBDJ01063114;XM_005392627 XP_005392684 MODEL 8897076 protein-coding LOC102006419 intestinal-type alkaline phosphatase-like NW_004955453 3542300 3545477 - 102006419 AGCD01044663;AGCD01044664;XM_013519762 XP_013375216 MODEL 8817903 ncrna LOC102006066 uncharacterized LOC102006066 NW_004955518 1072445 1103749 + 102006066 AGCD01067755;AGCD01067756;GBDF01079167;XR_264564 MODEL 730469475 snorna SNORA25 Small nucleolar RNA SNORA25 39132512 snorna SNORD14 Small nucleolar RNA SNORD14 9011189 protein-coding Rassf6 Ras association domain family member 6 INVOLVED IN positive regulation of apoptotic process (ortholog); regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955657 49115 59237 - 102014850 AGCD01077855;AGCD01077856;AGCD01077857;GBDI01028020;XM_005415062;XM_005415063 XP_005415119;XP_005415120 MODEL 8982958 protein-coding Lrig2 leucine rich repeats and immunoglobulin like domains 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN innervation (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of membrane protein ectodomain proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN growth cone (ortholog); intracellular vesicle (ortholog); membrane (ortholog) NW_004955435 16468300 16522503 + 102010624 AGCD01033332;AGCD01033333;GBCQ01065493;XM_005388976 XP_005389033 MODEL 39132446 snorna SNORA70 Small nucleolar RNA SNORA70 8745708 ncrna LOC102019993 uncharacterized LOC102019993 NW_004955412 18061832 18081483 - 102019993 AGCD01012924;GBCB01015873;XR_259998 MODEL 730469336 snorna SNORA43 Small nucleolar RNA SNORA43 8799956 protein-coding LOC102016506 translation initiation factor IF-2-like NW_004955431 15410646 15417651 - 102016506 AGCD01030361;GBCQ01032182;XM_005387901 XP_005387958 MODEL 8956671 protein-coding Rnf19a ring finger protein 19A, RBR E3 ubiquitin protein ligase INVOLVED IN regulation of protein catabolic process at postsynapse, modulating synaptic transmission (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) NW_004955417 15492056 15543591 - 102015718 AGCD01018234;AGCD01018235;AGCD01018236;GBDF01080231;GBDK01090137;XM_005381865 XP_005381922 MODEL 8929653 protein-coding LOC102019674 translation initiation factor IF-2-like NW_004955410 9633405 9658285 - 102019674 AGCD01010768;AGCD01010769;AGCD01010770;GBDI01315759;XM_013510683;XM_013510684;XM_013510685;XM_013510686;XR_001232768;XR_001232769 XP_013366137;XP_013366138;XP_013366139;XP_013366140 MODEL 39133604 snorna U3 Small nucleolar RNA U3 9059486 protein-coding Rpl8 ribosomal protein L8 ENCODES a protein that exhibits 5.8S rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955454 3397893 3400275 + 102020754 AGCD01045073;AY533227;GBDF01002095;XM_005395938 AAS59429;XP_005395995 MODEL 9058529 ncrna LOC102008325 uncharacterized LOC102008325 NW_004955491 2918171 2920095 + 102008325 AGCD01060390;GBDF01117852;XR_264034 MODEL 8963431 ncrna LOC102013467 uncharacterized LOC102013467 NW_004955404 29028733 29038238 + 102013467 AGCD01003968;GBDF01118402;XR_001235108 MODEL 8821855 protein-coding LOC102010279 guanylate-binding protein 6-like NW_004955423 4800576 4831760 + 102010279 AGCD01023545;AGCD01023546;GBDI01220537;XM_005385092;XM_005385093 XP_005385149;XP_005385150 MODEL 8956268 protein-coding Erich6b glutamate rich 6B ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955518 3279721 3333159 - 102028567 AGCD01067798;AGCD01067799;GBDF01120562;XM_013506952 XP_013362406 MODEL 8763906 protein-coding Pon3 paraoxonase 3 ENCODES a protein that exhibits acyl-L-homoserine-lactone lactonohydrolase activity (ortholog); arylesterase activity (ortholog); dihydrocoumarin hydrolase activity (ortholog); INVOLVED IN carboxylic acid catabolic process (ortholog); coumarin catabolic process (ortholog); lactone catabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); atherosclerosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955432 11945383 11983417 - 102017689 AGCD01030957;AGCD01030958;GBDJ01087076;XM_005388063 XP_005388120 MODEL 8702509 protein-coding Rigi RNA sensor RIG-I ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); double-stranded DNA binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); bicellular tight junction (ortholog); cytoplasm (ortholog) NW_004955472 3093895 3135524 + 102017119 AGCD01053503;AGCD01053504;GBBH01063676;XM_013522945 XP_013378399 MODEL 8989798 protein-coding LOC102003241 MARVEL domain-containing protein 3-like NW_004955484 4331566 4346570 + 102003241 AGCD01058209;AGCD01058210;GBCQ01038738;XM_013503949 XP_013359403 MODEL 8962134 protein-coding LOC102018487 olfactory receptor 1030-like NW_004955414 23728226 23729164 + 102018487 AGCD01015518;XM_005380523 XP_005380580 MODEL 8922879 protein-coding LOC102011894 olfactory receptor 5AS1-like NW_004955511 949994 950932 + 102011894 AGCD01066346;XM_005408219 XP_005408276 MODEL 8791905 ncrna LOC102013469 uncharacterized LOC102013469 NW_004955405 26349233 26375138 + 102013469 AGCD01005201;GBDK01414416;XR_259396 MODEL 8877296 protein-coding Pla2g4a phospholipase A2 group IVA ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); calcium ion binding (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); arachidonate secretion (ortholog); cellular response to antibiotic (ortholog); PARTICIPATES IN cyclooxygenase mediated pathway of arachidonic acid metabolism; endothelin signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955406 25257361 25392079 + 102014413 AGCD01006223;AGCD01006224;AGCD01006225;AGCD01006226;AGCD01006227;AGCD01006228;AGCD01006229;AGCD01006230;GBCE01023640;XM_005375092;XM_013521775 XP_005375149;XP_013377229 MODEL 730469388 snorna SNORA25 Small nucleolar RNA SNORA25 8933519 protein-coding Septin6 septin 6 INVOLVED IN cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN axon terminus (ortholog); cleavage furrow (ortholog); presynapse (ortholog) NW_004955534 306691 381799 + 102009315 AGCD01070448;GBBH01006609;XM_005410435;XM_005410437;XM_005410438;XM_013507703;XM_013507704;XM_013507705;XM_013507706 XP_005410492;XP_005410494;XP_005410495;XP_013363157;XP_013363158;XP_013363159;XP_013363160 MODEL 8975061 protein-coding Plxnb2 plexin B2 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); signaling receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN brain development (ortholog); excitatory synapse assembly (ortholog); homophilic cell-cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 33297617 33314371 - 102025673 AGCD01014662;GBDI01012765;GBDJ01023023;XM_005379555 XP_005379612 MODEL 8855899 protein-coding Rell2 RELT like 2 ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN positive regulation of cell-substrate adhesion (ortholog); positive regulation of p38MAPK cascade (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); plasma membrane (ortholog) NW_004955415 12134642 12138071 - 102005796 AGCD01016185;GBDF01165826;XM_005380727;XM_013512220;XM_013512221 XP_005380784;XP_013367674;XP_013367675 MODEL 10185757 pseudo LOC106147515 insulin receptor substrate 1-like NW_004955573 331063 332779 - 106147515 AGCD01074975 MODEL 8921678 pseudo LOC102007550 thioredoxin pseudogene NW_004955417 25525969 25526425 + 102007550 AGCD01018486 MODEL 8988308 protein-coding Ca2 carbonic anhydrase 2 ENCODES a protein that exhibits arylesterase activity (ortholog); carbonate dehydratase activity (ortholog); cyanamide hydratase activity (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); carbon dioxide transport (ortholog); cellular response to fluid shear stress (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); alcoholic pancreatitis (ortholog); Animal Disease Models (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) NW_004955417 3388110 3402798 + 102009177 AGCD01017914;GBBH01090608;GBCB01007542;XM_013512866 XP_013368320 MODEL 8980514 protein-coding Slc44a1 solute carrier family 44 member 1 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); ethanolamine transport (ortholog); transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Childhood-onset Neurodegeneration with Ataxia, Tremor, Optic Atrophy, and Cognitive Decline (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955419 21092583 21277294 - 102029297 AGCD01020265;AGCD01020266;AGCD01020267;AGCD01020268;AGCD01020269;AGCD01020270;GBCQ01164971;XM_005382780 XP_005382837 MODEL 39131571 protein-coding PURA purine rich element binding protein A 8793393 protein-coding Sh3bgrl SH3 domain binding glutamate rich protein like ENCODES a protein that exhibits protein-RNA adaptor activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of cytoplasmic translational initiation (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955529 1159704 1223222 + 102019318 AGCD01069675;AGCD01069676;AGCD01069677;GBDJ01011359;XM_005410074 XP_005410131 MODEL 8820968 protein-coding Proz protein Z, vitamin K dependent plasma glycoprotein INVOLVED IN blood coagulation (ortholog); PARTICIPATES IN coagulation cascade pathway; ASSOCIATED WITH Behcet's disease (ortholog); blood coagulation disease (ortholog); brain ischemia (ortholog); FOUND IN extracellular region (ortholog) NW_004955404 647217 657256 - 102006862 AGCD01003206;XM_005373954;XM_013515581;XM_013515592 XP_005374011;XP_013371035;XP_013371046 MODEL 8761460 protein-coding Ppp3cb protein phosphatase 3 catalytic subunit beta ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein serine/threonine phosphatase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN calcineurin-mediated signaling (ortholog); calcineurin-NFAT signaling cascade (ortholog); calcium-ion regulated exocytosis (ortholog); PARTICIPATES IN calcineurin signaling pathway; dopamine signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH aortic valve stenosis (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN calcineurin complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955437 18323852 18377815 + 102016849 AGCD01034789;AGCD01034790;GBCB01006009;XM_005389972;XM_005389973;XM_005389974;XM_005389975;XM_005389976;XM_005389977;XM_013516758;XM_013516760;XM_013516761 XP_005390029;XP_005390030;XP_005390031;XP_005390032;XP_005390033;XP_005390034;XP_013372212;XP_013372214;XP_013372215 MODEL 8976014 pseudo LOC102005715 60S ribosomal protein L7 pseudogene NW_004955487 5975491 5976261 + 102005715 AGCD01059350 MODEL 9068206 pseudo LOC102022544 caspase-3 pseudogene NW_004955543 215177 216358 - 102022544 AGCD01071566 MODEL 10108911 protein-coding Trnp1 TMF1 regulated nuclear protein 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cerebellar cortex morphogenesis (ortholog); neural precursor cell proliferation (ortholog); regulation of cell cycle (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN euchromatin (ortholog); nucleus (ortholog) NW_004955452 6335463 6341657 + 106149755 AGCD01044105;AGCD01044106;GBBH01186332;GBDF01207830;XM_013519741 XP_013375195 MODEL 9014271 ncrna LOC102006421 uncharacterized LOC102006421 NW_004955455 10924743 10925491 + 102006421 AGCD01045967;GBDF01002624;XR_262854 MODEL 39133407 snrna U4 U4 spliceosomal RNA 9009983 protein-coding Pias1 protein inhibitor of activated STAT 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN DNA damage response (ortholog); fat cell differentiation (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN aldosterone signaling pathway; ataxia telangiectasia-mutated (ATM) signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); Brain Injuries (ortholog); FOUND IN glutamatergic synapse (ortholog); nuclear periphery (ortholog); nucleoplasm (ortholog) NW_004955450 7896741 7991045 - 102022988 AGCD01042552;AGCD01042553;AGCD01042554;GBDJ01224794;XM_005393682;XR_001235865 XP_005393739 MODEL 8770290 protein-coding Pop1 POP1 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); tRNA decay (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anauxetic dysplasia 1 (ortholog); anauxetic dysplasia 2 (ortholog); FOUND IN multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog); nucleolus (ortholog) NW_004955417 13823027 13856448 + 102010157 AGCD01018191;GBCE01138351;XM_005381847 XP_005381904 MODEL 8766281 pseudo LOC102009085 beclin 1-associated autophagy-related key regulator pseudogene NW_004955427 20646973 20652239 + 102009085 AGCD01027412 MODEL 8892192 pseudo LOC102011032 aurora kinase A pseudogene NW_004955431 1227505 1229111 - 102011032 AGCD01029892 MODEL 8781922 ncrna LOC102005000 uncharacterized LOC102005000 NW_004956010 5739 9937 - 102005000 AGCD01078868;GBDF01006044;XR_265201 MODEL 39132439 snorna SNORA70 Small nucleolar RNA SNORA70 8820384 protein-coding LOC102011465 olfactory receptor 4D9-like NW_004955511 4030217 4031152 + 102011465 AGCD01066488;XM_005408064 XP_005408121 MODEL 8949266 ncrna LOC102004280 uncharacterized LOC102004280 NW_004955482 1521498 1525666 - 102004280 AGCD01057219;GBBH01079736;XR_263818 MODEL 8915624 pseudo LOC102019680 anaphase-promoting complex subunit 10 pseudogene NW_004955411 24699208 24699455 - 102019680 AGCD01012136 MODEL 8967249 protein-coding Rnf19b ring finger protein 19B ENCODES a protein that exhibits ubiquitin binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN natural killer cell mediated cytotoxicity (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN cytolytic granule (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955452 11179268 11190594 - 102004552 AGCD01044329;GBDF01010868;XM_013519574;XM_013519575 XP_013375028;XP_013375029 MODEL 10110819 ncrna LOC106147516 uncharacterized LOC106147516 NW_004955573 64079 65677 - 106147516 AGCD01074959;GBBH01045635;XR_001232440 MODEL 9045983 ncrna LOC102012286 uncharacterized LOC102012286 NW_004955408 21941027 22001034 + 102012286 AGCD01008567;GBBH01167569;XR_001232370;XR_259698 MODEL 8817344 protein-coding Rtn4rl1 reticulon 4 receptor like 1 ENCODES a protein that exhibits chondroitin sulfate binding (ortholog); heparin binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN corpus callosum development (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of neuron projection development (ortholog); FOUND IN cell surface (ortholog); membrane raft (ortholog); perikaryon (ortholog) NW_004955481 1209429 1277309 + 102013083 AGCD01056828;AGCD01056829;AGCD01056830;GBCE01021884;XM_005402600;XM_005402601;XM_013503376;XM_013503377;XR_263758;XR_263759;XR_263760;XR_263761;XR_263762 XP_005402657;XP_005402658;XP_013358830;XP_013358831 MODEL 730469554 snorna snoU2-30 Small nucleolar RNA U2-30 8946061 protein-coding Spmip5 sperm microtubule inner protein 5 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); substance-related disorder (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955431 21454858 21463068 - 102024150 AGCD01030496;GBDF01044869;XM_005387855;XM_013515844 XP_005387912;XP_013371298 MODEL 9062049 ncrna LOC102006068 uncharacterized LOC102006068 NW_004955522 4443395 4446145 - 102006068 AGCD01068417;GBDF01236174;XR_001231902 MODEL 8847927 ncrna LOC102003244 uncharacterized LOC102003244 NW_004955486 8568818 8579925 + 102003244 AGCD01059151;GBDF01224300;XR_001231117;XR_001231118;XR_001231119;XR_263964 MODEL 8912451 trna trnQ(ttg) tRNA-Gln MT 3745 3815 - 15822236 730469559 misc_rna SOX2OT_exon3 SOX2 overlapping transcript exon 3 8992532 protein-coding Lrig3 leucine rich repeats and immunoglobulin like domains 3 INVOLVED IN otolith morphogenesis (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955458 6562167 6601517 - 102014328 AGCD01047563;AGCD01047564;GBCE01053955;GBDK01395878;XM_005397422 XP_005397479 MODEL 8907098 protein-coding Wfdc5 WAP four-disulfide core domain 5 NW_004955445 12279799 12284819 + 102013123 AGCD01039749;GBDJ01360367;XM_005392453 XP_005392510 MODEL 8996746 protein-coding Psmd14 proteasome 26S subunit, non-ATPase 14 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); endopeptidase activator activity (ortholog); K63-linked deubiquitinase activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); double-strand break repair via nonhomologous end joining (ortholog); protein K63-linked deubiquitination (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol-associated liver disease (ortholog); autistic disorder (ortholog); FOUND IN cytosolic proteasome complex (ortholog); nucleoplasm (ortholog); proteasome accessory complex (ortholog) NW_004955449 12306026 12400908 - 102023649 AGCD01042111;AGCD01042112;GBDF01082613;XM_005393338;XM_005393340 XP_005393395;XP_005393397 MODEL 9006201 ncrna LOC102009086 uncharacterized LOC102009086 NW_004955428 14583845 14601030 - 102009086 AGCD01027989;AGCD01027990;GBCB01109528;XR_261303 MODEL 9063594 protein-coding Septin7 septin 7 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); identical protein binding (ortholog); structural constituent of postsynapse (ortholog); INVOLVED IN collateral sprouting (ortholog); cortical cytoskeleton organization (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); axon terminus (ortholog); axoneme (ortholog) NW_004955460 7287452 7374747 - 102005571 AGCD01048480;GBCE01002152;XM_005397770;XM_005397771;XM_013521220 XP_005397827;XP_005397828;XP_013376674 MODEL 8982136 protein-coding Ssr1 signal sequence receptor subunit 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955465 6540509 6557402 + 102029059 AGCD01050444;AGCD01050445;GBDF01043529;XM_005398857;XM_005398858 XP_005398914;XP_005398915 MODEL 8726040 ncrna LOC102008328 uncharacterized LOC102008328 NW_004955423 11498337 11509824 - 102008328 AGCD01023701;GBDF01306799;XR_260965;XR_260966 MODEL 8864632 protein-coding LOC102004282 histone H2B.v1-like NW_004955483 833570 838166 + 102004282 AGCD01057632;AGCD01057633;GBDI01063041;XM_005403424 XP_005403481 MODEL 9042475 protein-coding Tm2d3 TM2 domain containing 3 INVOLVED IN lateral inhibition (ortholog); Notch receptor processing, ligand-independent (ortholog); positive regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); frontotemporal dementia (ortholog); lung cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955416 28499077 28507907 - 102011764 AGCD01017630;GBDK01009358;XM_005381648 XP_005381705 MODEL 8844817 protein-coding Trim24 tripartite motif containing 24 ENCODES a protein that exhibits chromatin binding (ortholog); estrogen response element binding (ortholog); histone H3K23ac reader activity (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to estrogen stimulus (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN histone modification pathway; retinoic acid signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); castration-resistant prostate carcinoma (ortholog); FOUND IN cytoplasm (ortholog); euchromatin (ortholog); mitochondrion (ortholog) NW_004955494 4308924 4421588 - 102009957 AGCD01061494;AGCD01061495;AGCD01061496;AGCD01061497;AGCD01061498;GBBH01187802;GBDI01127792;XM_013504966 XP_013360420 MODEL 8904424 protein-coding Erlec1 endoplasmic reticulum lectin 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); endoplasmic reticulum quality control compartment (ortholog); Hrd1p ubiquitin ligase complex (ortholog) NW_004955441 19535425 19557960 + 102003697 AGCD01037349;AGCD01037350;AGCD01037351;AGCD01037352;GBBH01065712;GBDJ01003705;XM_013517526 XP_013372980 MODEL 9036915 pseudo LOC102010280 tubulin-folding cofactor B pseudogene NW_004955495 5024249 5025001 + 102010280 AGCD01061970 MODEL 9065638 protein-coding LOC102008710 olfactory receptor 8B4-like NW_004955412 25399638 25400570 - 102008710 AGCD01013151;XM_005378422 XP_005378479 MODEL 8940773 protein-coding Rassf7 Ras association domain family member 7 ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centriolar satellite (ortholog) NW_004955476 11485308 11487840 - 102012318 AGCD01055460;GBBH01061456;XM_013502923 XP_013358377 MODEL 9053557 protein-coding Riiad1 regulatory subunit of type II PKA R-subunit domain containing 1 ASSOCIATED WITH cholangiocarcinoma (ortholog) NW_004955589 686722 695805 - 102016332 AGCD01076180;AGCD01076181;GBDK01281968;XM_005414556;XM_005414557 XP_005414613;XP_005414614 MODEL 8932229 ncrna LOC102005716 uncharacterized LOC102005716 NW_004955421 23197095 23198981 + 102005716 AGCD01022174;GBCB01036865;XR_260820 MODEL 8737315 pseudo LOC102013471 poly(rC)-binding protein 2 pseudogene NW_004955405 1213036 1219942 - 102013471 AGCD01004598 MODEL 730469539 snorna SNORA25 Small nucleolar RNA SNORA25 730469372 snorna SNORA43 Small nucleolar RNA SNORA43 39133408 snrna U4 U4 spliceosomal RNA 9024922 protein-coding Pop4 POP4 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog); nucleolus (ortholog) NW_004955468 7983394 7994863 - 102012524 AGCD01052018;GBDI01104355;XM_005400112;XM_005400113;XM_005400114;XM_005400115 XP_005400169;XP_005400170;XP_005400171;XP_005400172 MODEL 9039189 protein-coding LOC102019994 dehydrogenase/reductase SDR family member 7 NW_004955466 9542613 9560806 + 102019994 AGCD01051044;AGCD01051045;AGCD01051046;GBCQ01037460;XM_005399184;XM_005399185 XP_005399241;XP_005399242 MODEL 9015212 protein-coding Plxnb3 plexin B3 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); protein domain specific binding (ortholog); Rho GDP-dissociation inhibitor binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); homophilic cell-cell adhesion (ortholog); negative regulation of cell adhesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog) NW_004955580 482602 495628 + 102016653 AGCD01075607;GBBH01163823;XM_005414143;XM_013509679;XM_013509680;XM_013509681;XM_013509682;XM_013509683;XM_013509684;XM_013509685;XM_013509686;XM_013509687;XR_001232477 XP_005414200;XP_013365133;XP_013365134;XP_013365135;XP_013365136;XP_013365137;XP_013365138;XP_013365139;XP_013365140;XP_013365141 MODEL 8810221 protein-coding Rpl9 ribosomal protein L9 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH cervical cancer (ortholog); Diamond-Blackfan anemia (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955443 7907628 7912472 + 102026578 AGCD01038301;GBDF01008561;XM_005391980;XM_005391981;XM_013518071 XP_005392037;XP_005392038;XP_013373525 MODEL 9061677 protein-coding Reln reelin ENCODES a protein that exhibits lipoprotein particle receptor binding (ortholog); receptor ligand activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN associative learning (ortholog); axon guidance (ortholog); brain development (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955410 8424439 8863966 - 102018268 AGCD01010746;AGCD01010747;AGCD01010748;AGCD01010749;AGCD01010750;AGCD01010751;AGCD01010752;AGCD01010753;GBCE01089394;XM_005377235;XM_005377236 XP_005377292;XP_005377293 MODEL 8719051 protein-coding Ca3 carbonic anhydrase 3 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); nickel cation binding (ortholog); phosphatase activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to insulin stimulus (ortholog); cellular response to leptin stimulus (ortholog); ASSOCIATED WITH alcohol-associated liver disease (ortholog); Binge Drinking (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955417 3362091 3372270 + 102004705 AGCD01017912;GBDF01125791;XM_005381744;XM_013512802;XM_013512803;XM_013512804 XP_005381801;XP_013368256;XP_013368257;XP_013368258 MODEL 10358993 ncrna LOC106147517 uncharacterized LOC106147517 NW_004955573 786062 790999 - 106147517 AGCD01075005;GBDF01080151;XR_001232441 MODEL 8728857 protein-coding Slc44a2 solute carrier family 44 member 2 (CTL2 blood group) ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); ethanolamine transport (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) NW_004955495 1780766 1804944 + 102008235 AGCD01061730;AGCD01061731;GBDK01014784;XM_005405608;XM_005405609 XP_005405665;XP_005405666 MODEL 39132523 snorna SNORD14 Small nucleolar RNA SNORD14 8979294 protein-coding Ssr2 signal sequence receptor subunit 2 INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH high grade glioma (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955545 2205906 2213780 - 102013874 AGCD01071888;GBCE01002063;XM_005411628;XM_013508268 XP_005411685;XP_013363722 MODEL 730469413 snorna snoU2_19 Small nucleolar RNA U2-19 8946411 protein-coding Sh3bgrl2 SH3 domain binding glutamate rich protein like 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); sarcoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955502 7517466 7575560 + 102008749 AGCD01064448;AGCD01064449;AGCD01064450;AGCD01064451;AGCD01064452;GBCE01135638;XM_005406914 XP_005406971 MODEL 9018750 ncrna LOC102011899 uncharacterized LOC102011899 NW_004955517 51555 54459 - 102011899 AGCD01067565;GBDK01097081;XR_264538 MODEL 8960397 ncrna LOC102006426 uncharacterized LOC102006426 NW_004955409 9876860 10068894 - 102006426 AGCD01009449;AGCD01009450;AGCD01009451;AGCD01009452;AGCD01009453;AGCD01009454;AGCD01009455;AGCD01009456;GBDF01306880;XR_001232611;XR_001232612;XR_001232613 MODEL 8735154 pseudo LOC102016511 60S ribosomal protein L6-like NW_004955434 16492140 16499177 + 102016511 AGCD01032530 MODEL 39133514 snorna U3 Small nucleolar RNA U3 8852335 protein-coding LOC102005001 keratin, type I cytoskeletal 14 NW_004955451 15903561 15907545 - 102005001 AGCD01043639;GBCE01032375;XM_005394411 XP_005394468 MODEL 8748193 pseudo LOC102007552 60S ribosomal protein L17 pseudogene NW_004955419 5413575 5414083 - 102007552 AGCD01019806 MODEL 8915732 protein-coding Pura purine rich element binding protein A ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN dendritic transport of messenger ribonucleoprotein complex (ortholog); epithelial cell proliferation (ortholog); lymphocyte proliferation (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); absence epilepsy (ortholog); Apnea (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955418 538883 548605 - 102023035 AGCD01018679;AGCD01018680;GBDJ01136954;GBDK01130809;XM_013512869 XP_013368323 MODEL 9017176 protein-coding LOC102011468 carnosine N-methyltransferase NW_004955512 4044108 4112888 + 102011468 AGCD01066722;AGCD01066723;AGCD01066724;AGCD01066725;AGCD01066726;AGCD01066727;AGCD01066728;AGCD01066729;GBCE01103835;GBDF01121011;XM_013506528 XP_013361982 MODEL 8929193 protein-coding Lrit1 leucine rich repeat, Ig-like and transmembrane domains 1 INVOLVED IN phototransduction (ortholog); response to light stimulus (ortholog); synaptic signaling (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); synapse (ortholog); synaptic cleft (ortholog) NW_004955510 3739957 3802081 - 102005493 AGCD01066247;GBDJ01166878;XM_005407886;XM_005407887;XR_001231669 XP_005407943;XP_005407944 MODEL 8981366 protein-coding Spmip6 sperm microtubule inner protein 6 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955472 1718474 1733980 + 102028955 AGCD01053409;AGCD01053410;GBDF01007585;XM_005401076;XM_005401077;XM_005401078;XM_005401079;XM_005401080;XM_013522971 XP_005401133;XP_005401134;XP_005401135;XP_005401136;XP_005401137;XP_013378425 MODEL 8876729 pseudo LOC102019686 olfactory receptor 51A7-like NW_004955414 20498737 20499672 - 102019686 AGCD01015376;XR_260184 MODEL 8793170 ncrna LOC102012289 uncharacterized LOC102012289 NW_004955410 7716614 7721059 + 102012289 AGCD01010722;GBDK01172238;XR_259826 MODEL 8860696 protein-coding Ppp3cc protein phosphatase 3 catalytic subunit gamma ENCODES a protein that exhibits calcium-dependent protein serine/threonine phosphatase activity (ortholog); calmodulin-dependent protein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); penetration of zona pellucida (ortholog); positive regulation of synaptic vesicle endocytosis (ortholog); PARTICIPATES IN calcineurin signaling pathway; dopamine signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN calcineurin complex (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955403 45915985 45969350 + 102008283 AGCD01002843;AGCD01002844;AGCD01002845;GBDJ01189557;GBDK01398281;XM_005373663 XP_005373720 MODEL 8867653 protein-coding LOC102022545 speckle-type POZ protein A-like NW_004955546 32587 33360 - 102022545 AGCD01071944;XM_005411814 XP_005411871 MODEL 8919046 protein-coding LOC102018488 uncharacterized LOC102018488 NW_004955473 10382694 10390790 - 102018488 AGCD01054094;GBDF01014963;XM_005401278 XP_005401335 MODEL 8858406 protein-coding Septin8 septin 8 ENCODES a protein that exhibits SNARE binding (ortholog); INVOLVED IN regulation of intracellular protein transport (ortholog); regulation of protein stability (ortholog); regulation of SNARE complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); myelin sheath (ortholog); presynapse (ortholog) NW_004955408 4129302 4143683 - 102003838 AGCD01008089;GBCE01094947;GBDK01003639;XM_005376114 XP_005376171 MODEL 8853203 protein-coding Rtn4rl2 reticulon 4 receptor like 2 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); corpus callosum development (ortholog); negative regulation of neuron projection development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955511 2463006 2474045 + 102029773 AGCD01066405;AGCD01066406;AGCD01066407;AGCD01066408;GBDF01148153;XM_013506377 XP_013361831 MODEL 8844690 pseudo LOC102006077 non-histone chromosomal protein HMG-14 pseudogene NW_004955547 2571567 2571850 - 102006077 AGCD01072283 MODEL 8865178 protein-coding Tm4sf1 transmembrane 4 L six family member 1 INVOLVED IN blastocyst formation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955448 608724 617189 - 102019652 AGCD01041235;GBBH01034830;XM_005392998 XP_005393055 MODEL 8897228 protein-coding Pla2g4b phospholipase A2 group IVB ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN glycerophospholipid catabolic process (ortholog); phosphatidylcholine acyl-chain remodeling (ortholog); phosphatidylethanolamine acyl-chain remodeling (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; alpha-linolenic acid metabolic pathway; antipyrine drug pathway; ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); mitochondrial inner membrane (ortholog) NW_004955416 8633249 8643219 + 102014353 AGCD01017064;GBDI01327602;XM_013512524 XP_013367978 MODEL 9052014 pseudo LOC102011036 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L pseudogene NW_004955434 9417014 9421344 + 102011036 AGCD01032299;AGCD01032300 MODEL 8830438 trna trnR(tcg) tRNA-Arg MT 9812 9879 + 15822210 730469181 misc_rna SOX2OT_exon4 SOX2 overlapping transcript exon 4 8842167 protein-coding Rassf8 Ras association domain family member 8 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); lung cancer (ortholog) NW_004955413 21029725 21052837 + 102004466 AGCD01014244;GBDI01260017;XM_005379106 XP_005379163 MODEL 8943590 protein-coding Pias2 protein inhibitor of activated STAT 2 ENCODES a protein that exhibits DNA binding (ortholog); nuclear androgen receptor binding (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); DNA-templated transcription (ortholog); endoplasmic reticulum unfolded protein response (ortholog); PARTICIPATES IN androgen signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear body (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955402 32263616 32358532 - 102004439 AGCD01000814;AGCD01000815;AGCD01000816;AGCD01000817;GBDI01219645;XM_005372880;XM_013510479;XM_013510482;XM_013510483;XM_013510485;XM_013510488;XM_013510490 XP_005372937;XP_013365933;XP_013365936;XP_013365937;XP_013365939;XP_013365942;XP_013365944 MODEL 730469549 snorna SNORA43 Small nucleolar RNA SNORA43 8989629 protein-coding Psmd2 proteasome 26S subunit ubiquitin receptor, non-ATPase 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) NW_004955420 23184914 23194809 - 102023604 AGCD01021233;GBDK01003599;XM_005383335 XP_005383392 MODEL 8735699 pseudo LOC102008330 guanine nucleotide-binding protein G(k) subunit alpha pseudogene NW_004955497 3650046 3651027 - 102008330 AGCD01062552 MODEL 8765460 protein-coding Rnf2 ring finger protein 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone H2AK119 ubiquitin ligase activity (ortholog); RING-like zinc finger domain binding (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); chromatin organization (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic pancreatitis (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); euchromatin (ortholog) NW_004955406 23672947 23725253 + 102005891 AGCD01006181;AGCD01006182;GBBH01172087;XM_005375061;XM_005375062;XM_005375063 XP_005375118;XP_005375119;XP_005375120 MODEL 8836794 protein-coding Purb purine rich element binding protein B ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955456 7322973 7323529 + 102008380 AGCD01046407;GBDJ01139895;XM_013520514 XP_013375968 MODEL 8842271 protein-coding Pop5 POP5 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); tRNA processing (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog); nucleolus (ortholog) NW_004955455 11069131 11071814 + 102008497 AGCD01045978;GBCE01034142;XM_005396499 XP_005396556 MODEL 8875335 ncrna LOC102004284 uncharacterized LOC102004284 NW_004955420 3065393 3096845 + 102004284 AGCD01020612;GBDF01113022;XR_260679;XR_260680 MODEL 8926172 ncrna LOC102010281 uncharacterized LOC102010281 NW_004955497 1128473 1136942 + 102010281 AGCD01062452;XR_001231423;XR_264189 MODEL 8992702 protein-coding Erlin1 ER lipid raft associated 1 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cholesterol biosynthetic process (ortholog); negative regulation of fatty acid biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); protein-containing complex (ortholog) NW_004955507 6029247 6062946 - 102020593 AGCD01065695;GBDF01082079;XM_005407685;XM_005407686 XP_005407742;XP_005407743 MODEL 150537134 snorna snoU6-53 Small nucleolar RNA U6-53/MBII-28 9027280 protein-coding Prp4k pre-mRNA processing factor kinase PRP4K ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN positive regulation of hippo signaling (ortholog); positive regulation of protein export from nucleus (ortholog); regulation of mitotic cell cycle spindle assembly checkpoint (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromosome (ortholog); kinetochore (ortholog) NW_004955465 9359634 9392913 - 102012619 AGCD01050491;AGCD01050492;GBBH01026999;XM_005398892;XR_001236750;XR_263254;XR_263256;XR_263258;XR_263259;XR_263260 XP_005398949 MODEL 39131734 snorna SNORA70 Small nucleolar RNA SNORA70 39133410 snrna U4 U4 spliceosomal RNA 8712939 protein-coding Ssr3 signal sequence receptor subunit 3 ASSOCIATED WITH basal cell carcinoma (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955448 7554303 7569022 - 102019340 AGCD01041414;AGCD01041415;AGCD01041416;GBCE01031602;XM_005393079 XP_005393136 MODEL 8833138 protein-coding LOC102013474 translation initiation factor IF-2-like NW_004955407 18942404 19075796 + 102013474 AGCD01007290;AGCD01007291;AGCD01007292;AGCD01007293;AGCD01007294;GBDF01304388;XM_013505824 XP_013361278 MODEL 8807997 pseudo LOC102006081 26S protease regulatory subunit 4 pseudogene NW_004955444 10175071 10176371 - 102006081 AGCD01039007;XR_262256 MODEL 8723537 protein-coding Sh3bgrl3 SH3 domain binding glutamate rich protein like 3 ENCODES a protein that exhibits glutathione transferase activity (ortholog); INVOLVED IN cytoskeleton organization (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); ruffle membrane (ortholog) NW_004955452 5683276 5684760 + 102015367 AGCD01044051;GBDF01000998;XM_005394851 XP_005394908 MODEL 8794779 ncrna LOC102016526 uncharacterized LOC102016526 NW_004955443 17482051 17497508 + 102016526 AGCD01038579;GBDF01277180;XR_262212 MODEL 8960827 protein-coding LOC102019995 nuclear transport factor 2 NW_004955413 9732710 9733561 - 102019995 AGCD01013910;XM_005378974 XP_005379031 MODEL 9005202 protein-coding Wfdc8 WAP four-disulfide core domain 8 ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955445 11666987 11682180 + 102030679 AGCD01039712;XM_013518242 XP_013373696 MODEL 9000631 trna trnS1(gct) tRNA-Ser MT 11621 11681 + 15822231 8867938 protein-coding LOC102009091 late lactation protein B-like NW_004955513 2501589 2504529 + 102009091 AGCD01066880;GBBH01002386;XM_013506585 XP_013362039 MODEL 8802976 ncrna LOC102012292 uncharacterized LOC102012292 NW_004955463 1605016 1606453 - 102012292 AGCD01049525;GBDJ01265798;XR_001236656 MODEL 8788668 ncrna LOC102019687 uncharacterized LOC102019687 NW_004955470 7596316 7606300 + 102019687 AGCD01052800;GBDF01150010;XR_001237033 MODEL 8835247 protein-coding Ca4 carbonic anhydrase 4 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); response to steroid hormone (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Colonic Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) NW_004955451 1485939 1493249 + 102006970 AGCD01042971;AGCD01042972;GBDI01293079;XM_005393960 XP_005394017 MODEL 39133369 snorna SNORD15 Small nucleolar RNA SNORD15 8888378 protein-coding Slc44a3 solute carrier family 44 member 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955435 3851 80691 + 102023947 AGCD01032711;GBCE01127157;GBDI01354385;XM_005388779;XM_005388780;XM_013516523;XM_013516524;XM_013516525 XP_005388836;XP_005388837;XP_013371977;XP_013371978;XP_013371979 MODEL 8743746 ncrna LOC102018490 uncharacterized LOC102018490 NW_004955415 16685821 16705592 + 102018490 AGCD01016391;AGCD01016392;AGCD01016393;GBDF01076606;XR_260300 MODEL 9008631 pseudo LOC102005717 hippocampus abundant transcript 1 protein pseudogene NW_004955490 4529263 4530710 - 102005717 AGCD01060188 MODEL 9002617 protein-coding Ppp3r1 protein phosphatase 3 regulatory subunit B, alpha ENCODES a protein that exhibits enzyme binding (ortholog); phosphatase binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN branching involved in blood vessel morphogenesis (ortholog); calcineurin-NFAT signaling cascade (ortholog); epithelial to mesenchymal transition (ortholog); PARTICIPATES IN calcineurin signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN calcineurin complex (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) NW_004955424 16624214 16690783 + 102022718 AGCD01024746;AGCD01024747;AGCD01024748;GBDF01190278;XM_005385670;XM_005385671;XM_005385672 XP_005385727;XP_005385728;XP_005385729 MODEL 8861987 pseudo LOC102003248 60S ribosomal protein L17 pseudogene NW_004955422 7684598 7685166 + 102003248 AGCD01022643;XM_005384099 MODEL 8844699 ncrna LOC102006427 uncharacterized LOC102006427 NW_004955459 3352170 3356325 - 102006427 AGCD01048013;XR_263014 MODEL 730469331 snorna SNORA25 Small nucleolar RNA SNORA25 8852951 protein-coding Rilp Rab interacting lysosomal protein ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); small GTPase binding (ortholog); sterol sensor activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); early endosome to late endosome transport (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN endosome membrane (ortholog); late endosome (ortholog); late endosome membrane (ortholog) NW_004955481 1531175 1534794 + 102018598 AGCD01056834;AGCD01056835;GBDF01180428;XM_005402615;XM_005402616;XM_013503411;XM_013503412 XP_005402672;XP_005402673;XP_013358865;XP_013358866 MODEL 8952183 pseudo LOC102011905 dnaJ homolog subfamily A member 1 pseudogene NW_004955526 2793294 2822895 + 102011905 AGCD01069321 MODEL 8796358 protein-coding Tm4sf18 transmembrane 4 L six family member 18 NW_004955448 550074 569045 - 102019121 AGCD01041233;GBDI01339659;XM_005392995;XM_013518686;XM_013518687 XP_005393052;XP_013374140;XP_013374141 MODEL 8721098 protein-coding Pla2g4c phospholipase A2 group IVC ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN glycerophospholipid catabolic process (ortholog); lipid droplet formation (ortholog); phosphatidylcholine acyl-chain remodeling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell cortex (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955609 182706 212102 + 102010967 AGCD01077053;AGCD01077054;GBDJ01028499;XM_013510120 XP_013365574 MODEL 39133516 snorna U3 Small nucleolar RNA U3 8766831 pseudo LOC102005006 cyclin-G1 pseudogene NW_004955454 13232268 13233432 + 102005006 AGCD01045431 MODEL 8705735 protein-coding Rassf9 Ras association domain family member 9 ENCODES a protein that exhibits enzyme binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN intracellular transport (ortholog); FOUND IN cytosol (ortholog); endosome (ortholog); recycling endosome (ortholog) NW_004955405 23677319 23711542 - 102006866 AGCD01005133;AGCD01005134;GBDI01327913;XM_005374413 XP_005374470 MODEL 8908004 protein-coding Plxnc1 plexin C1 INVOLVED IN regulation of synapse pruning (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog) NW_004955405 30885277 31023947 + 102027377 AGCD01005280;GBDF01119435;XM_005374690;XM_013518393;XM_013518395;XM_013518396;XM_013518398 XP_005374747;XP_013373847;XP_013373849;XP_013373850;XP_013373852 MODEL 8707218 pseudo LOC102011469 60S ribosomal protein L36a-like NW_004955431 5509247 5509567 - 102011469 AGCD01030034 MODEL 730469396 snorna SNORA43 Small nucleolar RNA SNORA43 8905887 protein-coding Trim25 tripartite motif containing 25 ENCODES a protein that exhibits RIG-I binding (ortholog); transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to leukemia inhibitory factor (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Joubert syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955451 5918287 5934252 + 102012821 AGCD01043189;AGCD01043190;GBDJ01024909;XM_005394067 XP_005394124 MODEL 8887956 ncrna LOC102008711 uncharacterized LOC102008711 NW_004955467 9917224 9927059 + 102008711 AGCD01051535;GBDF01226367;XR_001236854;XR_001236855 MODEL 8987086 protein-coding Relt RELT TNF receptor INVOLVED IN amelogenesis (ortholog); apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 3C (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955414 18074487 18104972 - 102016465 AGCD01015268;AGCD01015269;AGCD01015270;GBDK01307406;XM_005379952;XM_005379953;XM_005379954;XM_013511811 XP_005380009;XP_005380010;XP_005380011;XP_013367265 MODEL 8770681 ncrna LOC102022546 uncharacterized LOC102022546 NW_004955552 1838636 1865550 - 102022546 AGCD01072789;AGCD01072790;AGCD01072791;GBDI01143786;XR_001232278;XR_264926 MODEL 9062141 protein-coding Rnf20 ring finger protein 20 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H2B C-terminal K residue ubiquitin ligase activity (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH acute biphenotypic leukemia (ortholog); acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); FOUND IN BRE1 E3 ubiquitin ligase complex (ortholog); HULC complex (ortholog); nucleolus (ortholog) NW_004955419 24273714 24299454 - 102007344 AGCD01020340;GBDK01397898;XM_005382794 XP_005382851 MODEL 9029969 protein-coding Septin9 septin 9 INVOLVED IN actin cytoskeleton organization (ortholog); anterograde dendritic transport of neurotransmitter receptor complex (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Adenomatous Polyps (ortholog); amyotrophic neuralgia (ortholog); FOUND IN actin cytoskeleton (ortholog); axoneme (ortholog); cilium (ortholog) NW_004955506 4943108 5033088 - 102014381 AGCD01065350;AGCD01065351;GBBH01030877;GBDF01087331;XM_005407395 XP_005407452 MODEL 9032373 ncrna LOC102011037 uncharacterized LOC102011037 NW_004955435 7325862 7336787 - 102011037 AGCD01032952;AGCD01032953;AGCD01032954;GBDF01178841;XR_261667 MODEL 39133367 snorna SNORD15 Small nucleolar RNA SNORD15 9030472 protein-coding Erlin2 ER lipid raft associated 2 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cholesterol biosynthetic process (ortholog); negative regulation of fatty acid biosynthetic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); genetic disease (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane raft (ortholog) NW_004955463 13445468 13460370 + 102011633 AGCD01049867;GBBH01031754;XM_005398411;XM_013521497;XM_013521498 XP_005398468;XP_013376951;XP_013376952 MODEL 8870289 ncrna LOC102007553 uncharacterized LOC102007553 NW_004955483 2038491 2047890 - 102007553 AGCD01057666;GBCQ01014966;XR_263863 MODEL 8960211 protein-coding Sox3 SRY-box transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); face development (ortholog); forebrain development (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); hypopituitarism (ortholog); INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED, WITH PANHYPOPITUITARISM (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955489 4817753 4819858 + 102021981 AGCD01059916;AGCD01059917;GBDJ01389993;XM_013504464 XP_013359918 MODEL 730469316 snorna SNORA25 Small nucleolar RNA SNORA25 8873737 ncrna LOC102016528 uncharacterized LOC102016528 NW_004955444 4244420 4281393 - 102016528 AGCD01038808;AGCD01038809;AGCD01038810;GBDF01193897;XR_001235496;XR_262239 MODEL 8736686 protein-coding Spmip7 sperm microtubule inner protein 7 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH sarcoma (ortholog); thymoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955456 3845875 3885908 - 102005226 AGCD01046285;AGCD01046286;GBDK01163453;XM_005396622;XM_005396623 XP_005396679;XP_005396680 MODEL 9046188 ncrna LOC102019997 uncharacterized LOC102019997 NW_004955413 27072521 27074834 + 102019997 AGCD01014491;GBDF01001457;XR_001232950 MODEL 8878486 protein-coding Pias3 protein inhibitor of activated STAT 3 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); NF-kappaB binding (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression (ortholog); negative regulation of osteoclast differentiation (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; Jak-Stat signaling pathway; sumoylation pathway; ASSOCIATED WITH anemia (ortholog); atrial heart septal defect (ortholog); optic atrophy (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955568 227603 237396 + 102006402 AGCD01074506;GBDF01090380;XM_005413436;XM_005413437 XP_005413493;XP_005413494 MODEL 39131387 protein-coding WFDC8 WAP four-disulfide core domain 8 8922769 protein-coding Psmd3 proteasome 26S subunit, non-ATPase 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); proteasome accessory complex (ortholog) NW_004955451 14666882 14685573 + 102007615 AGCD01043565;AGCD01043566;GBBH01033601;GBDF01005924;XM_005394339 XP_005394396 MODEL 8800239 pseudo LOC102004286 prickle-like protein 1 pseudogene NW_004955420 23753712 23754662 - 102004286 AGCD01021255 MODEL 9043870 protein-coding Pop7 POP7 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog) NW_004955573 217809 218915 - 102014095 AGCD01074968;GBDJ01353728;XM_005413692;XM_005413693 XP_005413749;XP_005413750 MODEL 8740002 pseudo LOC102010284 general transcription factor 3C polypeptide 6 pseudogene NW_004955500 4949060 4951908 + 102010284 AGCD01063817 MODEL 8916076 protein-coding LOC102012303 NADH-cytochrome b5 reductase 3 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); INVOLVED IN nitric oxide biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955413 27971140 27979905 - 102012303 AGCD01014539;GBCB01020264;GBDI01016413;XM_013511507 XP_013366961 MODEL 150537135 snorna snoU6-53 Small nucleolar RNA U6-53/MBII-28 39131735 snorna SNORA70 Small nucleolar RNA SNORA70 9021111 protein-coding Slc44a4 solute carrier family 44 member 4 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); thiamine pyrophosphate transmembrane transporter activity (ortholog); INVOLVED IN acetylcholine biosynthetic process (ortholog); acetylcholine secretion (ortholog); choline transport (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 72 (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955437 383523 396456 - 102003278 AGCD01034128;AGCD01034129;GBDF01148766;XM_005389391 XP_005389448 MODEL 8754161 ncrna LOC102013482 uncharacterized LOC102013482 NW_004955410 30652472 30654572 + 102013482 AGCD01011311;GBDF01251645;XR_001232753 MODEL 10229345 ncrna LOC106147518 uncharacterized LOC106147518 NW_004955408 28335484 28416983 - 106147518 AGCD01008711;XR_001232442 MODEL 9023633 protein-coding Rplp0 ribosomal protein lateral stalk subunit P0 ENCODES a protein that exhibits peptide binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to interleukin-4 (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Down syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) NW_004955455 11404898 11409262 + 102014640 AGCD01046003;GBDJ01024840;XM_005396518 XP_005396575 MODEL 9019001 protein-coding Lrit2 leucine rich repeat, Ig-like and transmembrane domains 2 NW_004955510 3732436 3736557 - 102021154 AGCD01066247;XM_005407931 XP_005407988 MODEL 8766111 trna trnS2(tga) tRNA-Ser MT 6876 6944 - 15822205 8869791 protein-coding Ssr4 signal sequence receptor subunit 4 ASSOCIATED WITH congenital disorder of glycosylation Iy (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); Sec61 translocon complex (ortholog) NW_004955580 507672 511498 + 102018999 AGCD01075607;GBDF01005919;XM_005414152;XM_005414153;XM_005414154;XM_013509713 XP_005414209;XP_005414210;XP_005414211;XP_013365167 MODEL 9052463 protein-coding LOC102003250 transient receptor potential cation channel subfamily V member 5 NW_004955494 693654 721271 + 102003250 AGCD01061383;GBDF01039033;XM_005405380;XM_013504911 XP_005405437;XP_013360365 MODEL 8841466 protein-coding Tm4sf19 transmembrane 4 L six family member 19 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN positive regulation of osteoclast differentiation (ortholog); FOUND IN actin cytoskeleton (ortholog); filopodium (ortholog); lysosomal membrane (ortholog) NW_004955420 12532435 12558861 - 102011772 AGCD01020871;AGCD01020872;AGCD01020873;AGCD01020874;GBBH01073716;XM_005383131;XM_013513400;XM_013513401 XP_005383188;XP_013368854;XP_013368855 MODEL 8885815 protein-coding Rilpl1 Rab interacting lysosomal protein like 1 INVOLVED IN epithelial cell morphogenesis (ortholog); positive regulation of neuron apoptotic process (ortholog); protein transport from ciliary membrane to plasma membrane (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955482 5424898 5455145 + 102016918 AGCD01057330;GBCB01004251;GBCQ01095809;XM_005403032;XM_005403033;XM_005403034;XM_005403035;XM_005403036 XP_005403089;XP_005403090;XP_005403091;XP_005403092;XP_005403093 MODEL 8791739 pseudo LOC102008331 cytoplasmic dynein 1 intermediate chain 2 pseudogene NW_004955500 4123771 4125723 + 102008331 AGCD01063770 MODEL 9026124 ncrna LOC102009092 uncharacterized LOC102009092 NW_004955431 13020164 13023563 + 102009092 AGCD01030276;GBDF01210949;XR_261468 MODEL 9025547 protein-coding Purg purine rich element binding protein G ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN synapse (ortholog) NW_004955463 7460533 7495106 - 102028169 AGCD01049732;AGCD01049733;AGCD01049734;GBDF01087359;GBDF01304571;XM_005398386 XP_005398443 MODEL 730469587 snorna SNORA43 Small nucleolar RNA SNORA43 8812861 pseudo LOC102016541 heat shock cognate 71 kDa protein-like NW_004955402 44401794 44403967 + 102016541 AGCD01001113;XR_259086 MODEL 8714068 protein-coding LOC102011483 tryptase-like NW_004955442 16039127 16040641 + 102011483 AGCD01037891;GBCE01068870;XM_005391590 XP_005391647 MODEL 8997714 protein-coding Rtp1 receptor transporter protein 1 ENCODES a protein that exhibits olfactory receptor binding (ortholog); INVOLVED IN protein insertion into membrane (ortholog); FOUND IN cell surface (ortholog) NW_004955420 20622226 20625073 - 102026751 AGCD01021095;AGCD01021096;GBBH01073077;XM_005383256 XP_005383313 MODEL 8865165 ncrna LOC102018491 uncharacterized LOC102018491 NW_004955416 21069345 21083402 + 102018491 AGCD01017496;GBCB01076411;XR_001233319;XR_001233320;XR_260403;XR_260405;XR_260406 MODEL 8761417 protein-coding Trim26 tripartite motif containing 26 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); host-mediated suppression of symbiont invasion (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955583 303081 325560 - 102013127 AGCD01075810;AGCD01075811;GBCB01073423;GBCE01135032;XM_013509781 XP_013365235 MODEL 39133411 snrna U4 U4 spliceosomal RNA 8740336 protein-coding LOC102008712 oxidized low-density lipoprotein receptor 1 NW_004955413 7662314 7721687 + 102008712 AGCD01013828;AGCD01013829;AGCD01013830;GBDF01111532;XM_005378938 XP_005378995 MODEL 8966875 protein-coding LOC102019690 zinc finger protein 239-like NW_004955472 7099528 7311751 - 102019690 AGCD01053616;AGCD01053617;AGCD01053618;AGCD01053619;GBCQ01110878;XM_005401140;XM_005401141;XM_005401142;XM_005401143;XM_013522998;XM_013522999;XM_013523000;XM_013523001;XM_013523002;XM_013523003;XM_013523004;XM_013523005;XM_013523006;XM_013523007;XM_013523008;XM_013523009;XM_013523010;XM_013523011;XR_001237089;XR_001237090;XR_001237091;XR_001237092;XR_001237093;XR_001237094;XR_001237095 XP_005401197;XP_005401198;XP_005401199;XP_005401200;XP_013378452;XP_013378453;XP_013378454;XP_013378455;XP_013378456;XP_013378457;XP_013378458;XP_013378459;XP_013378460;XP_013378461;XP_013378462;XP_013378463;XP_013378464;XP_013378465 MODEL 8784605 protein-coding Rem1 RRAD and GEM like GTPase 1 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); regulation of skeletal muscle contraction by calcium ion signaling (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN I band (ortholog); T-tubule (ortholog) NW_004955422 29434477 29443172 - 102021886 AGCD01023394;GBDK01342980;XM_005384913 XP_005384970 MODEL 8706434 protein-coding Ppp3r2 protein phosphatase 3 regulatory subunit B, beta ENCODES a protein that exhibits calcium-dependent protein serine/threonine phosphatase regulator activity (ortholog); INVOLVED IN penetration of zona pellucida (ortholog); PARTICIPATES IN calcineurin signaling pathway; ASSOCIATED WITH traumatic brain injury (ortholog); FOUND IN calcineurin complex (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) NW_004955419 24252772 24253730 + 102006666 AGCD01020340;GBDF01003998;XM_005382792 XP_005382849 MODEL 9015579 pseudo LOC102006428 transketolase pseudogene NW_004955459 3131676 3133894 + 102006428 AGCD01048009 MODEL 8791941 protein-coding Serac1 serine active site containing 1 INVOLVED IN extracellular matrix organization (ortholog); intracellular cholesterol transport (ortholog); phosphatidylglycerol acyl-chain remodeling (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); extracellular matrix (ortholog) NW_004955439 4234440 4291947 + 102013761 AGCD01035706;AGCD01035707;AGCD01035708;GBBH01082146;XM_005390526 XP_005390583 MODEL 39133519 snorna U3 Small nucleolar RNA U3 8972222 pseudo LOC102007555 eukaryotic translation initiation factor 2A-like NW_004955484 7623437 7625083 + 102007555 AGCD01058340 MODEL 8888104 protein-coding Plxnd1 plexin D1 ENCODES a protein that exhibits protein domain specific binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); aorta development (ortholog); branching involved in blood vessel morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN axon (ortholog); cell body (ortholog); glutamatergic synapse (ortholog) NW_004955429 17746814 17775072 + 102012112 AGCD01028866;GBBH01026681;GBDF01280799;XM_013515508 XP_013370962 MODEL 8873994 ncrna LOC102022552 uncharacterized LOC102022552 NW_004955402 19749867 19763274 - 102022552 AGCD01000567;GBDF01262712;XR_259059 MODEL 8717791 pseudo LOC102008333 thrombospondin type-1 domain-containing protein 1-like NW_004955426 16226528 16227149 - 102008333 AGCD01026464 MODEL 8836713 pseudo LOC102006086 diphosphoinositol polyphosphate phosphohydrolase 2 pseudogene NW_004955594 540020 541200 + 102006086 AGCD01076434 MODEL 8766878 protein-coding Prpf18 pre-mRNA processing factor 18 INVOLVED IN negative regulation of protein metabolic process (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955429 20581457 20613258 - 102009742 AGCD01028986;GBBH01209489;XM_005387160;XM_013515516 XP_005387217;XP_013370970 MODEL 8843090 pseudo LOC102011486 RNA-binding protein 4B pseudogene NW_004955446 4882192 4882609 - 102011486 AGCD01040049 MODEL 8810527 pseudo LOC102012305 60S ribosomal protein L26-like 1 pseudogene NW_004955468 11168153 11174462 - 102012305 AGCD01052119 MODEL 39133368 snorna SNORD15 Small nucleolar RNA SNORD15 8904572 protein-coding LOC102011040 olfactory receptor 56-like NW_004955530 191959 192906 + 102011040 AGCD01069832;XM_005410119 XP_005410176 MODEL 8836750 protein-coding Sh3bp1 SH3 domain binding protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); semaphorin receptor binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin filament organization (ortholog); cell junction assembly (ortholog); cell migration (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cell leading edge (ortholog) NW_004955413 24042875 24054826 + 102007419 AGCD01014345;AGCD01014346;GBBH01092698;XM_005379214 XP_005379271 MODEL 730469301 snorna SNORA25 Small nucleolar RNA SNORA25 8827123 pseudo LOC102005007 succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial pseudogene NW_004955454 12974527 12986293 + 102005007 AGCD01045425 MODEL 8774091 protein-coding Sox30 SRY-box transcription factor 30 ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of Wnt signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Liver Metastasis (ortholog); lung adenocarcinoma (ortholog); FOUND IN chromocenter (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955408 11790145 11830426 - 102016785 AGCD01008318;AGCD01008319;GBDF01000048;XM_005376239;XM_013508812 XP_005376296;XP_013364266 MODEL 8906200 protein-coding Raver1 ribonucleoprotein, PTB binding 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955495 1594864 1609251 - 102003563 AGCD01061704;AGCD01061705;GBCE01008151;XM_005405591;XM_013505162;XM_013505163;XM_013505164;XM_013505165 XP_005405648;XP_013360616;XP_013360617;XP_013360618;XP_013360619 MODEL 9015846 pseudo LOC102019999 ubiquitin-fold modifier 1 pseudogene NW_004955414 20499886 20500110 + 102019999 AGCD01015376 MODEL 8955205 protein-coding Spmip8 sperm microtubule inner protein 8 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); sperm flagellum (ortholog) NW_004955433 15551435 15558054 + 102009097 AGCD01031758;GBDF01082073;XM_005388429 XP_005388486 MODEL 8730602 protein-coding LOC102003251 olfactory receptor 4C3-like NW_004955422 242830 243737 - 102003251 AGCD01022401;XM_013513877 XP_013369331 MODEL 730469472 snorna SNORA43 Small nucleolar RNA SNORA43 8905934 protein-coding Pias4 protein inhibitor of activated STAT 4 ENCODES a protein that exhibits DNA binding (ortholog); SUMO ligase activity (ortholog); SUMO transferase activity (ortholog); INVOLVED IN central nervous system development (ortholog); hair follicle development (ortholog); limb epidermis development (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; Jak-Stat signaling pathway; type II interferon signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nuclear matrix (ortholog); nucleoplasm (ortholog) NW_004955495 4760576 4791422 - 102015025 AGCD01061946;AGCD01061947;AGCD01061948;GBDI01227492;XM_005405818;XM_013505234 XP_005405875;XP_013360688 MODEL 9055972 protein-coding Psmd4 proteasome 26S subunit ubiquitin receptor, non-ATPase 4 ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog) NW_004955588 607763 618040 + 102028482 AGCD01076117;GBDF01043329;XM_005414507;XM_005414508 XP_005414564;XP_005414565 MODEL 8884636 pseudo LOC102009093 60S ribosomal protein L5-like NW_004955431 17585076 17587986 - 102009093 AGCD01030409 MODEL 8812686 protein-coding Rnf208 ring finger protein 208 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955513 5219250 5223043 - 102010083 AGCD01066962;AGCD01066963;GBCQ01070851;GBDI01261575;XM_005408603 XP_005408660 MODEL 8905107 pseudo LOC102011909 ATP synthase F(0) complex subunit C2, mitochondrial pseudogene NW_004955538 2556303 2557233 + 102011909 AGCD01071128 MODEL 8982394 protein-coding LOC102010292 olfactory receptor 1019 NW_004955511 1765100 1766038 + 102010292 AGCD01066379;XM_005407976 XP_005408033 MODEL 8807962 protein-coding LOC102005721 RNA-binding protein 14 NW_004955422 18730230 18755479 - 102005721 AGCD01022960;GBBH01033313;XM_005384379;XM_005384380;XM_005384381;XM_005384383;XM_005384385;XM_013513904;XM_013513905;XM_013513906 XP_005384436;XP_005384437;XP_005384438;XP_005384440;XP_005384442;XP_013369358;XP_013369359;XP_013369360 MODEL 730468990 snorna snoU6-53 Small nucleolar RNA U6-53/MBII-28 8924920 ncrna LOC102008719 uncharacterized LOC102008719 NW_004955474 1262389 1267127 - 102008719 AGCD01054244;AGCD01054245;GBDI01098588;XR_263586 MODEL 39131736 snorna SNORA70 Small nucleolar RNA SNORA70 8852395 protein-coding LOC102006087 vegetative cell wall protein gp1-like NW_004955450 9118960 9126357 + 102006087 AGCD01042585;GBBH01149209;XM_013518830 XP_013374284 MODEL 9010383 protein-coding LOC102011487 olfactory receptor 2B6-like NW_004955576 1333991 1334947 + 102011487 AGCD01075372;XM_005413953 XP_005414010 MODEL 10347013 ncrna LOC106147519 uncharacterized LOC106147519 NW_004955408 28421896 28449575 - 106147519 AGCD01008711;AGCD01008712;AGCD01008713;GBBH01014797;XR_001232443 MODEL 8753565 protein-coding Rplp1 ribosomal protein lateral stalk subunit P1 ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to Thyroid stimulating hormone (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955450 7053378 7055858 - 102015794 AGCD01042531;GBBH01015831;XM_005393659 XP_005393716 MODEL 39133521 snorna U3 Small nucleolar RNA U3 8892010 protein-coding Ca5a carbonic anhydrase 5A ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); ASSOCIATED WITH anemia (ortholog); CARBONIC ANHYDRASE VA DEFICIENCY, HYPERAMMONEMIA DUE TO (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) NW_004955541 2141450 2159955 - 102003176 AGCD01071402;GBBH01033496;XM_005411015 XP_005411072 MODEL 39131448 protein-coding WFDC9 WAP four-disulfide core domain 9 8914975 protein-coding Ssrp1 structure specific recognition protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN nucleosome disassembly (ortholog); regulation of chromatin organization (ortholog); transcription elongation-coupled chromatin remodeling (ortholog); PARTICIPATES IN cisplatin drug pathway; histone modification pathway; RNA polymerase I transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); FACT complex (ortholog); nucleolus (ortholog) NW_004955511 2378720 2388201 - 102016405 AGCD01066400;AGCD01066401;GBCB01024236;XM_013506474;XM_013506475;XM_013506476;XM_013506477 XP_013361928;XP_013361929;XP_013361930;XP_013361931 MODEL 8819305 pseudo LOC102004287 S-phase kinase-associated protein 1 pseudogene NW_004955421 10942295 10942798 - 102004287 AGCD01021885 MODEL 9006531 protein-coding Rilpl2 Rab interacting lysosomal protein like 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN epithelial cell morphogenesis (ortholog); protein transport from ciliary membrane to plasma membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); cytosol (ortholog) NW_004955482 5470965 5482600 + 102018398 AGCD01057333;AGCD01057334;AGCD01057335;AGCD01057336;GBBH01060488;XM_005403038 XP_005403095 MODEL 8723692 protein-coding Pus1 pseudouridine synthase 1 ENCODES a protein that exhibits chromatin binding (ortholog); mitochondrial tRNA pseudouridine(27/28) synthase activity (ortholog); pseudouridine synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); tRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Disease Progression (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleolus (ortholog) NW_004955482 749265 756964 - 102024908 AGCD01057187;GBDF01159325;XM_005402971;XM_013503609;XM_013503610;XM_013503611;XM_013503612;XM_013503613 XP_005403028;XP_013359063;XP_013359064;XP_013359065;XP_013359066;XP_013359067 MODEL 8730276 protein-coding LOC102016543 uncharacterized LOC102016543 NW_004955604 157552 165981 + 102016543 AGCD01076865;AGCD01076866;GBBH01212518;XM_013510085 XP_013365539 MODEL 9050627 pseudo LOC102018502 mitochondrial folate transporter/carrier pseudogene NW_004955487 5235509 5238027 - 102018502 AGCD01059323 MODEL 8750752 protein-coding Rtp2 receptor transporter protein 2 ENCODES a protein that exhibits olfactory receptor binding (ortholog); INVOLVED IN protein insertion into membrane (ortholog); FOUND IN cell surface (ortholog) NW_004955420 20043153 20047082 + 102024803 AGCD01021071;GBBH01107471;XM_005383249 XP_005383306 MODEL 8870672 ncrna LOC102022555 uncharacterized LOC102022555 NW_004955450 3762810 3767772 + 102022555 AGCD01042444;GBDF01250880;XR_001235838 MODEL 39133512 snrna U4 U4 spliceosomal RNA 8714545 pseudo LOC102008336 60S ribosomal protein L13 pseudogene NW_004955508 1222169 1222822 + 102008336 AGCD01065759 MODEL 8758381 protein-coding Pla2g4d phospholipase A2 group IVD ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); INVOLVED IN glycerophospholipid catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955416 8841645 8860381 - 102017565 AGCD01017071;GBDI01198984;XM_005381323 XP_005381380 MODEL 8745785 protein-coding Ppp4c protein phosphatase 4 catalytic subunit ENCODES a protein that exhibits lamin binding (ortholog); phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); dephosphorylation (ortholog); negative regulation of protein phosphorylation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); coronary artery disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955493 6894849 6901344 - 102022090 AGCD01061147;GBDF01000385;XM_005405187;XM_005405188 XP_005405244;XP_005405245 MODEL 8776955 ncrna LOC102006432 uncharacterized LOC102006432 NW_004955410 5331999 5347043 - 102006432 AGCD01010683;GBBH01023353;XR_001232771;XR_259820 MODEL 8860755 ncrna LOC102011050 uncharacterized LOC102011050 NW_004955440 19071638 19074811 - 102011050 AGCD01036626;GBDF01013047;XR_262047 MODEL 8827231 pseudo LOC102012309 RAC-gamma serine/threonine-protein kinase-like NW_004955414 21907536 21908908 - 102012309 AGCD01015437 MODEL 9011212 protein-coding Serbp1 SERPINE1 mRNA binding protein 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); ribosome binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of translation (ortholog); PML body organization (ortholog); regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); Disease Progression (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955423 23763356 23774816 + 102015645 AGCD01024017;GBBH01001652;GBCE01000542;XM_005385275;XM_013514510;XM_013514511;XM_013514512 XP_005385332;XP_013369964;XP_013369965;XP_013369966 MODEL 8730107 pseudo LOC102007556 60S ribosomal protein L9 pseudogene NW_004955419 23050823 23052195 - 102007556 AGCD01020311 MODEL 8744019 protein-coding LOC102006090 neutrophil cationic peptide 2-like NW_004955403 53736552 53738672 + 102006090 AGCD01003071;GBDF01020160;XM_005373838 XP_005373895 MODEL 8703074 protein-coding Spmip9 sperm microtubule inner protein 9 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH urinary bladder cancer (ortholog); uterine carcinosarcoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955424 296514 305141 - 102011332 AGCD01024170;AGCD01024171;GBDF01007131;XM_005385378;XM_005385379;XM_013514595;XM_013514596 XP_005385435;XP_005385436;XP_013370049;XP_013370050 MODEL 8993034 protein-coding Popdc1 popeye domain cAMP effector 1 ENCODES a protein that exhibits cAMP binding (ortholog); structural molecule activity (ortholog); INVOLVED IN cell migration involved in heart development (ortholog); epithelial cell-cell adhesion (ortholog); heart development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2X (ortholog); genetic disease (ortholog); limb-girdle muscular dystrophy (ortholog); FOUND IN bicellular tight junction (ortholog); caveola (ortholog); cell junction (ortholog) NW_004955411 30517917 30548424 - 102030054 AGCD01012257;AGCD01012258;GBCB01000928;GBDF01087341;XM_013510787 XP_013366241 MODEL 9050824 ncrna LOC102003254 uncharacterized LOC102003254 NW_004955423 19319841 19322762 - 102003254 AGCD01023889;GBDF01056704;XR_260982 MODEL 9066505 protein-coding Trim27 tripartite motif containing 27 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol 3-kinase inhibitor activity (ortholog); SUMO transferase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); Arp2/3 complex-mediated actin nucleation (ortholog); negative regulation of autophagy (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); mitochondrion (ortholog) NW_004955465 13891001 13902767 - 102008834 AGCD01050633;GBCE01076355;GBCE01076358;XM_013521856 XP_013377310 MODEL 8895869 protein-coding LOC102019692 phospholipid scramblase 1-like NW_004955474 11087013 11105735 + 102019692 AGCD01054609;AGCD01054610;GBDK01263372;XM_005401437 XP_005401494 MODEL 8786186 ncrna LOC102009094 uncharacterized LOC102009094 NW_004955432 20999224 21001060 + 102009094 AGCD01031213;GBDF01304667;XR_261541 MODEL 8806508 pseudo LOC102010293 olfactory receptor 10AG1-like NW_004955511 885492 889414 - 102010293 AGCD01066346 MODEL 8949221 trna trnT(tgt) tRNA-Thr MT 15303 15370 + 15822215 8934951 protein-coding Lrit3 leucine rich repeat, Ig-like and transmembrane domains 3 INVOLVED IN gene expression (ortholog); intracellular protein localization (ortholog); regulation of fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1F (ortholog); fundus dystrophy (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); perikaryon (ortholog) NW_004955496 434236 456239 - 102024356 AGCD01062227;AGCD01062228;XM_005406184 XP_005406241 MODEL 8755833 protein-coding Slc44a5 solute carrier family 44 member 5 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955423 17260324 17615777 + 102026230 AGCD01023852;AGCD01023853;AGCD01023854;AGCD01023855;AGCD01023856;AGCD01023857;AGCD01023858;GBDF01088885;XM_005385229;XM_013514352;XM_013514353;XM_013514354 XP_005385286;XP_013369806;XP_013369807;XP_013369808 MODEL 8936960 protein-coding Tm4sf20 transmembrane 4 L six family member 20 INVOLVED IN negative regulation of proteolysis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); Specific Language Impairment 5 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955453 7201738 7219322 + 102010444 AGCD01044739;GBDF01239560;XM_005395452;XM_013519941 XP_005395509;XP_013375395 MODEL 730469293 snorna SNORA25 Small nucleolar RNA SNORA25 8705104 ncrna LOC102011493 uncharacterized LOC102011493 NW_004955403 2475409 2479214 + 102011493 AGCD01001736;GBDF01280925;XR_001234362 MODEL 10322056 protein-coding Sox4 SRY-box transcription factor 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN ascending aorta morphogenesis (ortholog); atrial septum primum morphogenesis (ortholog); cardiac right ventricle morphogenesis (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Asphyxia (ortholog); basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955483 5076664 5077059 - 106146545 AGCD01057752;GBDJ01023868;GBDJ01107737;XM_013503841 XP_013359295 MODEL 9047029 protein-coding Ppp4r1 protein phosphatase 4 regulatory subunit 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN protein phosphatase 4 complex (ortholog) NW_004955402 2529335 2568621 + 102023309 AGCD01000083;AGCD01000084;GBCE01096633;GBDK01143623;XM_013515377 XP_013370831 MODEL 10202658 protein-coding LOC106147520 cytochrome P450 3A14 NW_004955573 1424278 1477714 - 106147520 AGCD01075050;AGCD01075051;AGCD01075052;AGCD01075053;AGCD01075054;AGCD01075055;AGCD01075056;AGCD01075057;GBBH01209737;GBCQ01052951;XM_013509482 XP_013364936 MODEL 8777274 protein-coding Sh3bp2 SH3 domain binding protein 2 ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); SH3 domain binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); Bone Fractures (ortholog) NW_004955514 1700889 1730002 + 102026459 AGCD01067061;AGCD01067062;GBDF01124956;XM_005408740;XM_005408741;XM_013506799;XM_013506800;XM_013506801;XM_013506802 XP_005408797;XP_005408798;XP_013362253;XP_013362254;XP_013362255;XP_013362256 MODEL 9039742 protein-coding Pm20d1 peptidase M20 domain containing 1 ENCODES a protein that exhibits hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); amino acid metabolic process (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog) NW_004955406 41522800 41544332 - 102014210 AGCD01006685;GBDI01244269;XM_005375377 XP_005375434 MODEL 730468959 snorna SNORA43 Small nucleolar RNA SNORA43 8821940 ncrna LOC102013484 uncharacterized LOC102013484 NW_004955411 20773140 20790799 + 102013484 AGCD01012062;GBDF01156022;XR_001232796;XR_001232797;XR_259940 MODEL 9065988 ncrna LOC102016544 uncharacterized LOC102016544 NW_004955451 119497 120688 + 102016544 AGCD01042918;GBDJ01131534;XR_001236000 MODEL 8968557 protein-coding Rem2 RRAD and GEM like GTPase 2 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955409 37403758 37408312 - 102030048 AGCD01010511;GBDI01226110;XM_005377113 XP_005377170 MODEL 9036390 protein-coding Pus10 pseudouridine synthase 10 ENCODES a protein that exhibits primary miRNA binding (ortholog); pseudouridine synthase activity (ortholog); tRNA pseudouridine synthase activity (ortholog); INVOLVED IN primary miRNA processing (ortholog); tRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955424 22830889 22899420 + 102026128 AGCD01024990;AGCD01024991;AGCD01024992;AGCD01024993;GBDF01195069;XM_005385749;XM_005385750;XM_005385751;XM_005385752;XM_013514667 XP_005385806;XP_005385807;XP_005385808;XP_005385809;XP_013370121 MODEL 8963406 protein-coding Rnf212 ring finger protein 212 INVOLVED IN chiasma assembly (ortholog); meiotic gene conversion (ortholog); reciprocal meiotic recombination (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); spermatogenic failure 3 (ortholog); spermatogenic failure 62 (ortholog); FOUND IN synaptonemal complex (ortholog) NW_004955514 525430 559037 - 102013439 AGCD01067013;AGCD01067014;GBDJ01376934;XM_005408690;XM_005408691;XM_005408692;XM_005408693;XM_013506854;XM_013506855;XM_013506856;XM_013506857;XM_013506858 XP_005408747;XP_005408748;XP_005408749;XP_005408750;XP_013362308;XP_013362309;XP_013362310;XP_013362311;XP_013362312 MODEL 39132275 snorna snoU83B Small nucleolar RNA U83B 8883542 protein-coding Prpf19 pre-mRNA processing factor 19 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog); double-strand break repair via nonhomologous end joining (ortholog); inner cell mass cell proliferation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); DNA replication factor A complex (ortholog) NW_004955511 5546212 5552368 - 102003266 AGCD01066568;GBDF01006561;GBDI01004319;XM_005408116 XP_005408173 MODEL 8851127 protein-coding Pibf1 progesterone immunomodulatory binding factor 1 ENCODES a protein that exhibits identical protein binding (ortholog); interleukin-4 receptor binding (ortholog); INVOLVED IN cilium assembly (ortholog); mitotic metaphase chromosome alignment (ortholog); mitotic spindle assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical dystonia (ortholog); cleft palate (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955404 33713903 33897622 - 102026181 AGCD01004078;AGCD01004079;AGCD01004080;AGCD01004081;AGCD01004082;AGCD01004083;GBCQ01006314;XM_005374185;XM_005374186;XM_005374187;XM_013516628 XP_005374242;XP_005374243;XP_005374244;XP_013372082 MODEL 8964151 pseudo LOC102011910 WD repeat-containing protein 25-like NW_004955437 2585766 2597361 - 102011910 AGCD01034277;AGCD01034278 MODEL 39132053 snorna SNORD16 Small nucleolar RNA SNORD16 39131737 snorna SNORA70 Small nucleolar RNA SNORA70 8746899 pseudo LOC102008721 28S ribosomal protein S36, mitochondrial pseudogene NW_004955476 2667352 2667663 - 102008721 AGCD01055231 MODEL 9005359 pseudo LOC102005009 septin-2-like NW_004955457 11878770 11880262 - 102005009 AGCD01046992 MODEL 9060759 protein-coding LOC102010294 chromosome unknown open reading frame, human C4orf50 NW_004955514 4112935 4206895 + 102010294 AGCD01067127;AGCD01067128;GBDF01183618;XM_005408860 XP_005408917 MODEL 8998724 protein-coding Raver2 ribonucleoprotein, PTB binding 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955423 25583650 25626925 - 102007246 AGCD01024081;AGCD01024082;GBBH01084470;XM_005385370 XP_005385427 MODEL 39133554 snorna U3 Small nucleolar RNA U3 8999041 protein-coding Slc45a1 solute carrier family 45 member 1 ENCODES a protein that exhibits D-glucose:proton symporter activity (ortholog); galactose:proton symporter activity (ortholog); hexose transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); galactose transmembrane transport (ortholog); transmembrane transport from lysosomal lumen to cytosol (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); epilepsy (ortholog); esophageal cancer (ortholog); FOUND IN lysosomal membrane (ortholog); membrane (ortholog) NW_004955486 4701889 4732008 - 102023605 AGCD01059063;AGCD01059064;AGCD01059065;AGCD01059066;GBDF01222620;GBDJ01042970;XM_013504132 XP_013359586 MODEL 8880337 ncrna LOC102004288 uncharacterized LOC102004288 NW_004955422 13815996 13839961 + 102004288 AGCD01022838;AGCD01022839;GBDI01205369;XR_001233902;XR_260874;XR_260875 MODEL 9046163 protein-coding Sstr1 somatostatin receptor 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); somatostatin receptor activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cerebellum development (ortholog); PARTICIPATES IN somatostatin signaling pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); Experimental Diabetes Mellitus (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); G protein-coupled receptor heterodimeric complex (ortholog); G protein-coupled receptor homodimeric complex (ortholog) NW_004955409 22889800 22894480 - 102018062 AGCD01010047;GBDJ01336093;XM_005376892;XM_005376893 XP_005376949;XP_005376950 MODEL 8985858 protein-coding Psmd5 proteasome 26S subunit, non-ATPase 5 INVOLVED IN proteasome regulatory particle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome regulatory particle, base subcomplex (ortholog) NW_004955419 7199549 7221431 + 102025008 AGCD01019875;GBBH01025438;XM_005382593 XP_005382650 MODEL 8813947 protein-coding Wfikkn1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 ENCODES a protein that exhibits receptor antagonist activity (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN muscle cell development (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); roof of mouth development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955442 16573094 16577650 - 102024168 AGCD01037901;GBDK01343854;XM_005391633 XP_005391690 MODEL 8824262 protein-coding LOC102018506 cytochrome c oxidase subunit 4 isoform 2, mitochondrial INVOLVED IN cellular response to hypoxia (ortholog); mitochondrial electron transport, cytochrome c to oxygen (ortholog); ASSOCIATED WITH Exocrine Pancreatic Insufficiency, Dyserythropoietic Anemia, and Calvarial Hyperostosis (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955422 29320720 29329082 - 102018506 AGCD01023390;GBBH01150060;GBCQ01033098;XM_005384903 XP_005384960 MODEL 8723060 protein-coding Rtp3 receptor transporter protein 3 INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); protein targeting to membrane (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); Liver Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) NW_004955420 25545752 25550044 - 102025364 AGCD01021365;GBDK01129519;XM_005383440;XM_005383441;XM_005383442;XM_013513589;XM_013513590 XP_005383497;XP_005383498;XP_005383499;XP_013369043;XP_013369044 MODEL 8709544 protein-coding LOC102022557 serine protease 55 NW_004955403 52130187 52140797 + 102022557 AGCD01003002;AGCD01003003;GBDF01031608;XM_005373804 XP_005373861 MODEL 9046428 protein-coding Trim28 tripartite motif containing 28 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin-protein adaptor activity (ortholog); chromo shadow domain binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); convergent extension involved in axis elongation (ortholog); DNA damage response (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); heterochromatin (ortholog) NW_004955584 1148903 1156001 + 102030140 AGCD01075981;AGCD01075982;GBBH01031424;GBCB01020438;XM_013509851 XP_013365305 MODEL 9003282 ncrna LOC102019693 uncharacterized LOC102019693 NW_004955416 7298910 7308048 + 102019693 AGCD01016971;AGCD01016972;GBDF01144819;XR_260364 MODEL 8984025 protein-coding Pla2g4e phospholipase A2 group IVE ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN N-acylphosphatidylethanolamine metabolic process (ortholog); positive regulation of endocytic recycling (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); early endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955416 8765620 8826184 - 102017011 AGCD01017068;AGCD01017069;AGCD01017070;GBCB01100712;XM_005381321;XM_013512526;XM_013512528 XP_005381378;XP_013367980;XP_013367982 MODEL 8947702 gene LOC102020001 Ig heavy chain V-I region 5-like NW_004955470 608115 608658 - 102020001 AGCD01052616;XM_005400822 MODEL 8817192 pseudo LOC102006437 splicing factor 45-like NW_004955411 31564696 31581136 + 102006437 AGCD01012274;AGCD01012275 MODEL 8844787 protein-coding Rplp2 ribosomal protein lateral stalk subunit P2 ENCODES a protein that exhibits iron ion binding (ortholog); ribonucleoprotein complex binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to Thyroid stimulating hormone (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); synapse (ortholog) NW_004955476 11312051 11314334 - 102009601 AGCD01055449;GBDF01007084;XM_005401811 XP_005401868 MODEL 9028860 protein-coding Serf2 small EDRK-rich factor 2 INVOLVED IN protein destabilization (ortholog) NW_004955416 10251533 10252429 + 102012642 AGCD01017126;GBCB01007574;GBDF01001580;XM_005381409 XP_005381466 MODEL 8973894 protein-coding LOC102009095 carboxylesterase 1D-like NW_004955433 13464493 13497375 - 102009095 AGCD01031692;GBCQ01008179;XM_005388331;XM_005388332 XP_005388388;XP_005388389 MODEL 8908319 ncrna LOC102007558 uncharacterized LOC102007558 NW_004955420 29057445 29063697 + 102007558 AGCD01021493;GBDF01157337;XR_001233702;XR_260770 MODEL 730469246 snorna SNORA25 Small nucleolar RNA SNORA25 8737604 protein-coding Ca5b carbonic anhydrase 5B ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN response to bacterium (ortholog); FOUND IN mitochondrion (ortholog) NW_004955519 2415722 2455052 - 102012120 AGCD01067929;AGCD01067930;AGCD01067931;GBCE01169072;XM_005409159 XP_005409216 MODEL 8733726 protein-coding LOC102011496 RAD52 motif-containing protein 1-like NW_004957952 76 531 + 102011496 AGCD01081348;GBDJ01230466;GBDJ01230469;XM_005415236 XP_005415293 MODEL 9033587 protein-coding Rimbp2 RIMS binding protein 2 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); structural constituent of presynaptic active zone (ortholog); voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels (ortholog); INVOLVED IN regulation of calcium-dependent activation of synaptic vesicle fusion (ortholog); regulation of presynaptic membrane potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN calyx of Held (ortholog); glutamatergic synapse (ortholog); presynaptic active zone cytoplasmic component (ortholog) NW_004955482 1326628 1431358 + 102003342 AGCD01057214;GBDF01277317;XM_013503718;XM_013503719;XM_013503720;XM_013503721;XM_013503722;XM_013503723;XM_013503724;XM_013503725;XM_013503726;XM_013503727;XM_013503728 XP_013359172;XP_013359173;XP_013359174;XP_013359175;XP_013359176;XP_013359177;XP_013359178;XP_013359179;XP_013359180;XP_013359181;XP_013359182 MODEL 8979103 ncrna LOC102006092 uncharacterized LOC102006092 NW_004955405 12203636 12228952 - 102006092 AGCD01004849;GBDK01148852;XR_001235355;XR_001235356;XR_001235357;XR_001235358 MODEL 8863969 protein-coding LOC102011051 tetratricopeptide repeat protein 39B-like NW_004955441 6423398 6437402 + 102011051 AGCD01036920;GBDF01008292;XM_005390888 XP_005390945 MODEL 8709960 protein-coding Erln endoregulin FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955506 6590028 6592474 - 102014927 AGCD01065432;GBDF01040884;XM_005407489 XP_005407546 MODEL 8931119 protein-coding Spn sialophorin ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); chronic inflammatory response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); calcinosis (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); cleavage furrow (ortholog) NW_004955493 7256505 7258607 - 102010498 AGCD01061171;AGCD01061172;GBBH01003419;GBCE01185294;XM_013504779 XP_013360233 MODEL 8737136 pseudo LOC102005723 putative olfactory receptor 9A1 NW_004955494 1730333 1731273 + 102005723 AGCD01061422 MODEL 8825057 protein-coding Sox5 SRY-box transcription factor 5 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN asymmetric neuroblast division (ortholog); cartilage condensation (ortholog); cartilage development (ortholog); ASSOCIATED WITH Asthma-Chronic Obstructive Pulmonary Disease Overlap Syndrome (ortholog); astigmatism (ortholog); atrial fibrillation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955413 18831931 19676371 - 102025340 AGCD01014193;AGCD01014194;AGCD01014195;AGCD01014196;AGCD01014197;AGCD01014198;AGCD01014199;AGCD01014200;AGCD01014201;GBDJ01347233;XM_005379082;XM_005379083;XM_005379084;XM_005379086;XM_005379087;XM_005379090;XM_005379093;XM_013511607;XM_013511608;XM_013511609 XP_005379139;XP_005379140;XP_005379141;XP_005379143;XP_005379144;XP_005379147;XP_005379150;XP_013367061;XP_013367062;XP_013367063 MODEL 9028095 ncrna LOC102003258 uncharacterized LOC102003258 NW_004955424 19212442 19216315 - 102003258 AGCD01024810;GBDF01079876;XR_261081 MODEL 39133513 snrna U4 U4 spliceosomal RNA 730468971 snorna SNORA43 Small nucleolar RNA SNORA43 8733305 protein-coding Sh3bp4 SH3 domain binding protein 4 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN amino acid import (ortholog); cellular response to amino acid stimulus (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); axonal neuropathy (ortholog); basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955453 1387954 1425268 - 102028930 AGCD01044612;GBDK01141681;XM_005395325;XM_005395328;XM_005395329 XP_005395382;XP_005395385;XP_005395386 MODEL 8914346 protein-coding Popdc2 popeye domain cAMP effector 2 ENCODES a protein that exhibits cAMP binding (ortholog); INVOLVED IN regulation of heart rate (ortholog); regulation of membrane potential (ortholog); sinoatrial node cell development (ortholog); ASSOCIATED WITH Cardiac Conduction Disease with or without Dilated Cardiomyopathy 2 (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN membrane (ortholog); sarcolemma (ortholog) NW_004955427 19347880 19367759 - 102020590 AGCD01027365;GBCB01073022;XM_005386452;XM_005386453;XM_013515175 XP_005386509;XP_005386510;XP_013370629 MODEL 8707940 protein-coding LOC102013488 disintegrin and metalloproteinase domain-containing protein 29-like NW_004955466 20379 80896 + 102013488 AGCD01050641;AGCD01050642;AGCD01050643;AGCD01050644;AGCD01050645;AGCD01050646;AGCD01050647;AGCD01050648;AGCD01050649;XM_005399240 XP_005399297 MODEL 8880582 protein-coding LOC102008337 olfactory receptor 1030 NW_004955511 1667797 1668753 - 102008337 AGCD01066377;XM_005407970 XP_005408027 MODEL 39132272 snorna snoU83B Small nucleolar RNA U83B 9066599 protein-coding Ren renin ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); endopeptidase activity (ortholog); insulin-like growth factor receptor binding (ortholog); INVOLVED IN angiotensin maturation (ortholog); cell maturation (ortholog); cellular response to xenobiotic stimulus (ortholog); PARTICIPATES IN benazepril pharmacodynamics pathway; candesartan pharmacodynamics pathway; captopril pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Albuminuria (ortholog); anemia (ortholog); FOUND IN apical part of cell (ortholog); extracellular region (ortholog); membrane (ortholog) NW_004955406 40016624 40026286 - 102018155 AGCD01006651;XM_005375286 XP_005375343 MODEL 39131442 protein-coding LRMDA leucine rich melanocyte differentiation associated 8990296 protein-coding Trnt1 tRNA nucleotidyl transferase 1 ENCODES a protein that exhibits CCA tRNA nucleotidyltransferase activity (ortholog); CCACCA tRNA nucleotidyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN mitochondrial tRNA 3'-end processing (ortholog); rescue of stalled cytosolic ribosome (ortholog); tRNA 3'-terminal CCA addition (ortholog); ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN catalytic complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955421 10192065 10211527 - 102021249 AGCD01021870;GBBH01037146;XM_005383747;XM_005383748;XM_005383749 XP_005383804;XP_005383805;XP_005383806 MODEL 39132284 snorna SNORD17 Small nucleolar RNA SNORD17 9034843 protein-coding Tm4sf4 transmembrane 4 L six family member 4 INVOLVED IN tissue regeneration (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); liver disease (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955448 708325 731614 + 102020395 AGCD01041237;GBCQ01160897;XM_005392999 XP_005393056 MODEL 9045988 protein-coding LOC102012311 olfactory receptor 480-like NW_004955414 23617985 23618923 - 102012311 AGCD01015506;XM_005380205 XP_005380262 MODEL 8975138 protein-coding Ppp4r2 protein phosphatase 4 regulatory subunit 2 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); regulation of double-strand break repair (ortholog); regulation of double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955421 15165836 15220509 - 102027194 AGCD01021969;AGCD01021970;GBCQ01094246;XM_005383766;XM_013513753 XP_005383823;XP_013369207 MODEL 9031796 pseudo LOC102011501 60S ribosomal protein L9 pseudogene NW_004955406 3129354 3129909 + 102011501 AGCD01005665 MODEL 8908424 protein-coding Sstr2 somatostatin receptor 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein heterodimerization activity (ortholog); somatostatin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to estradiol stimulus (ortholog); cellular response to glucocorticoid stimulus (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); Experimental Diabetes Mellitus (ortholog); neuroendocrine tumor (ortholog); FOUND IN cytosol (ortholog); G protein-coupled receptor heterodimeric complex (ortholog); membrane (ortholog) NW_004955478 61126 123806 - 102017013 AGCD01055730;AGCD01055731;AGCD01055732;GBCE01034986;XM_005402090;XM_005402091;XR_263680;XR_263681;XR_263682;XR_263683 XP_005402147;XP_005402148 MODEL 8930397 protein-coding Pus3 pseudouridine synthase 3 ENCODES a protein that exhibits pseudouridine synthase activity (ortholog); tRNA pseudouridine(38/39) synthase activity (ortholog); INVOLVED IN tRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH Neurodevelopmental Disorder with Microcephaly and Gray Sclerae (ortholog) NW_004955412 26941837 26951524 - 102026732 AGCD01013224;GBDF01146206;XM_005378481;XM_005378482 XP_005378538;XP_005378539 MODEL 8716819 protein-coding Prpf3 pre-mRNA processing factor 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal tri-snRNP complex assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cajal body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 429259 455449 - 102015301 AGCD01013465;AGCD01013466;AGCD01013467;AGCD01013468;GBDK01133619;XM_005378686;XM_005378687;XR_001232982 XP_005378743;XP_005378744 MODEL 39131738 snorna SNORA70 Small nucleolar RNA SNORA70 8705060 pseudo LOC102008726 peptidyl-prolyl cis-trans isomerase FKBP11 pseudogene NW_004955481 3772130 3773131 + 102008726 AGCD01056916 MODEL 8798355 protein-coding Trim29 tripartite motif containing 29 ENCODES a protein that exhibits identical protein binding (ortholog); p53 binding (ortholog); INVOLVED IN negative regulation of protein localization to nucleus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lysosome (ortholog) NW_004955412 21134076 21158982 - 102010139 AGCD01013018;GBCE01037365;XM_005378344;XM_013511251 XP_005378401;XP_013366705 MODEL 9014299 protein-coding LOC102010296 uncharacterized LOC102010296 NW_004955516 3709709 3720497 + 102010296 AGCD01067503;AGCD01067504;GBCE01103721;XM_005409002 XP_005409059 MODEL 39133556 snorna U3 Small nucleolar RNA U3 39132059 snorna SNORD18 Small nucleolar RNA SNORD18 8753410 pseudo LOC102009099 UDP-glucuronosyltransferase 1-1 pseudogene NW_004955433 9487229 9488826 + 102009099 AGCD01031613 MODEL 730469244 snorna SNORA25 Small nucleolar RNA SNORA25 8820002 protein-coding Slc45a2 solute carrier family 45 member 2 ENCODES a protein that exhibits D-glucose:proton symporter activity (ortholog); sucrose:proton symporter activity (ortholog); INVOLVED IN developmental pigmentation (ortholog); lysosomal lumen pH elevation (ortholog); melanin biosynthetic process from tyrosine (ortholog); ASSOCIATED WITH Albinism (ortholog); arthrogryposis multiplex congenita-4 (ortholog); basal cell carcinoma (ortholog); FOUND IN melanosome membrane (ortholog) NW_004955426 19498942 19530628 - 102027881 AGCD01026547;GBDF01043012;XM_005386166;XM_005386167;XM_013514938;XM_013514939 XP_005386223;XP_005386224;XP_013370392;XP_013370393 MODEL 8911090 ncrna LOC102004289 uncharacterized LOC102004289 NW_004955492 6522268 6526985 - 102004289 AGCD01060768;GBDF01157405;XR_264058 MODEL 8800139 protein-coding Ca6 carbonic anhydrase 6 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955486 4234293 4249026 - 102025128 AGCD01059057;GBBH01198071;XM_005404045 XP_005404102 MODEL 8968931 ncrna LOC102016547 uncharacterized LOC102016547 NW_004955403 22757246 22772806 + 102016547 AGCD01002231;GBDF01176504;XR_259197;XR_259198 MODEL 9058724 protein-coding Ermap erythroblast membrane associated protein (Scianna blood group) ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955537 2340282 2360925 + 102016848 AGCD01070925;AGCD01070926;AGCD01070927;GBBH01072402;XM_013507744;XM_013507745 XP_013363198;XP_013363199 MODEL 8933402 protein-coding Rtp4 receptor transporter protein 4 INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); protein targeting to membrane (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Human Influenza (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955420 20435924 20459440 - 102028423 AGCD01021092;XM_013513337 XP_013368791 MODEL 8821884 pseudo LOC102011911 citrate synthase, mitochondrial-like NW_004955438 13790119 13791348 - 102011911 AGCD01035308 MODEL 9017765 protein-coding LOC102019695 coatomer subunit gamma-2-like NW_004955479 11135050 11137352 - 102019695 AGCD01056574;GBCC01046014;XM_005402449 XP_005402506 MODEL 8789723 protein-coding LOC102005010 vomeronasal type-2 receptor 116-like NW_004955457 13422847 13441378 - 102005010 AGCD01047044;XM_005397122 XP_005397179 MODEL 8835506 protein-coding LOC102013491 NACHT, LRR and PYD domains-containing protein 1-like NW_004955467 10981913 11033217 - 102013491 AGCD01051593;AGCD01051594;AGCD01051595;AGCD01051596;AGCD01051597;GBDK01014412;XM_013522161;XM_013522162;XM_013522163;XM_013522164 XP_013377615;XP_013377616;XP_013377617;XP_013377618 MODEL 8965555 protein-coding LOC102020003 phospholipid scramblase 2 NW_004955474 11145325 11187876 + 102020003 AGCD01054611;AGCD01054612;AGCD01054613;GBDF01051584;XM_005401438 XP_005401495 MODEL 9039470 protein-coding LOC102006440 olfactory receptor 8D2-like NW_004955412 25129549 25130483 - 102006440 AGCD01013136;XM_013510980 XP_013366434 MODEL 8948869 protein-coding Pm20d2 peptidase M20 domain containing 2 ENCODES a protein that exhibits dipeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN proteolysis (ortholog); regulation of protein metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955411 15932367 15943946 + 102017434 AGCD01011962;GBCQ01101234;GBDI01384473;XM_013510884 XP_013366338 MODEL 8917395 protein-coding LOC102007561 vomeronasal type-1 receptor 48-like NW_004955421 21854981 21855904 - 102007561 AGCD01022122;XM_005383930 XP_005383987 MODEL 9017465 trna trnV(tac) tRNA-Val MT 1021 1087 + 15822216 8943463 protein-coding Renbp renin binding protein ENCODES a protein that exhibits ATP binding (ortholog); enzyme inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN N-acetylglucosamine metabolic process (ortholog); N-acetylmannosamine metabolic process (ortholog); negative regulation of catalytic activity (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog) NW_004955580 610112 615019 - 102024067 AGCD01075615;GBCE01052970;GBCQ01072116;XM_013509702 XP_013365156 MODEL 8975500 protein-coding Tm4sf5 transmembrane 4 L six family member 5 ENCODES a protein that exhibits arginine binding (ortholog); INVOLVED IN regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN lysosomal membrane (ortholog); plasma membrane (ortholog) NW_004955467 10178892 10196230 + 102014034 AGCD01051549;AGCD01051550;AGCD01051551;AGCD01051552;GBDI01010193;XM_005399598;XM_013522217;XM_013522218;XM_013522220 XP_005399655;XP_013377671;XP_013377672;XP_013377674 MODEL 8900029 ncrna LOC102011056 uncharacterized LOC102011056 NW_004955443 9637905 9651098 + 102011056 AGCD01038358;GBDF01014410;XR_262200;XR_262201 MODEL 8949343 protein-coding Rimkla ribosomal modification protein rimK like family member A ENCODES a protein that exhibits N-acetyl-L-aspartate-L-glutamate ligase activity (ortholog); INVOLVED IN L-glutamate catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955537 1992660 2024331 + 102009875 AGCD01070910;GBDI01027251;GBDI01027253;XM_005410597 XP_005410654 MODEL 8999270 protein-coding Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 ENCODES a protein that exhibits receptor antagonist activity (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN muscle cell development (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); roof of mouth development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955451 10976748 10982482 - 102029352 AGCD01043338;GBCB01111308;XM_005394122 XP_005394179 MODEL 8804119 ncrna LOC102005727 uncharacterized LOC102005727 NW_004955424 19528323 19533322 + 102005727 AGCD01024829;GBDI01309346;XR_261083 MODEL 8770945 pseudo LOC102003261 40S ribosomal protein S20 pseudogene NW_004955501 30940 31292 + 102003261 AGCD01063987 MODEL 8971700 pseudo LOC102011503 10 kDa heat shock protein, mitochondrial pseudogene NW_004955406 38802378 38802693 + 102011503 AGCD01006609 MODEL 8759121 protein-coding Sh3bp5 SH3 domain binding protein 5 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); ASSOCIATED WITH lung cancer (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); mitochondrion (ortholog); nuclear body (ortholog) NW_004955430 2251544 2266166 + 102014074 AGCD01029161;AGCD01029162;GBCB01005483;XM_005387310 XP_005387367 MODEL 8918707 protein-coding Popdc3 popeye domain cAMP effector 3 ENCODES a protein that exhibits cAMP binding (ortholog); INVOLVED IN regulation of membrane potential (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 26 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955411 30566988 30573158 - 102030617 AGCD01012259;GBDF01133919;XM_005377823;XM_013510788 XP_005377880;XP_013366242 MODEL 8911608 protein-coding LOC102022559 ATP-binding cassette sub-family G member 2-like NW_004955405 9444970 9614939 + 102022559 AGCD01004773;AGCD01004774;AGCD01004775;AGCD01004776;AGCD01004777;AGCD01004778;AGCD01004779;AGCD01004780;AGCD01004781;AGCD01004782;AGCD01004783;AGCD01004784;GBCQ01014385;XM_005374296;XM_005374297 XP_005374353;XP_005374354 MODEL 8796542 protein-coding Ca7 carbonic anhydrase 7 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN intracellular pH reduction (ortholog); positive regulation of synaptic transmission, GABAergic (ortholog); regulation of chloride transport (ortholog); ASSOCIATED WITH melanoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cytosol (ortholog) NW_004955433 23365832 23374517 + 102023732 AGCD01031959;GBDF01241916;XM_005388474;XM_013516269;XM_013516270 XP_005388531;XP_013371723;XP_013371724 MODEL 10098289 ncrna LOC106147521 uncharacterized LOC106147521 NW_004955408 28415162 28423366 + 106147521 AGCD01008711;XR_001232444 MODEL 8979727 protein-coding Rax retina and anterior neural fold homeobox ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN brain development (ortholog); camera-type eye development (ortholog); hypothalamus development (ortholog); ASSOCIATED WITH Adrenal Insufficiency (ortholog); Animal Disease Models (ortholog); Anophthalmia (ortholog); FOUND IN nucleus (ortholog) NW_004955402 43408933 43414697 - 102006190 AGCD01001072;AGCD01001073;GBDJ01056238;XM_005373175 XP_005373232 MODEL 8699863 protein-coding Pla2g4f phospholipase A2 group IVF ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN arachidonate secretion (ortholog); cellular response to antibiotic (ortholog); fatty acid transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955416 8876560 8889764 - 102017867 AGCD01017071;GBBH01062799;XM_005381324;XM_005381325;XM_013512650 XP_005381381;XP_005381382;XP_013368104 MODEL 8845945 protein-coding Rnf212b ring finger protein 212B ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN chiasma assembly (ortholog); homologous chromosome pairing at meiosis (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH Female Infertility (ortholog); FOUND IN chromosome (ortholog); synaptonemal complex (ortholog) NW_004955409 37041751 37095179 - 102022891 AGCD01010489;AGCD01010490;AGCD01010491;AGCD01010492;AGCD01010493;GBBH01144835;GBDI01355540;XM_013510437 XP_013365891 MODEL 39131739 snorna SNORA70 Small nucleolar RNA SNORA70 8839753 ncrna LOC102008729 uncharacterized LOC102008729 NW_004955419 12989057 12990429 + 102008729 AGCD01019990;GBDF01083945;XR_001233562 MODEL 8878333 protein-coding Lrmda leucine rich melanocyte differentiation associated INVOLVED IN melanocyte differentiation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955437 15678397 16173214 - 102024845 AGCD01034694;AGCD01034695;AGCD01034696;AGCD01034697;AGCD01034698;AGCD01034699;AGCD01034700;GBCB01043098;XM_013516966 XP_013372420 MODEL 8817338 ncrna LOC102012320 uncharacterized LOC102012320 NW_004955416 18878338 18879499 - 102012320 AGCD01017411;GBDF01086604;XR_260394 MODEL 8821965 protein-coding Prpf31 pre-mRNA processing factor 31 ENCODES a protein that exhibits identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); ribonucleoprotein complex localization (ortholog); snoRNA localization (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; spliceosome pathway; ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN Cajal body (ortholog); MLL1 complex (ortholog); nuclear speck (ortholog) NW_004955604 125489 136209 - 102014515 AGCD01076864;GBDF01079967;XM_005414861;XM_005414862;XM_005414863 XP_005414918;XP_005414919;XP_005414920 MODEL 8978545 protein-coding Sergef secretion regulating guanine nucleotide exchange factor INVOLVED IN negative regulation of protein secretion (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955414 32579419 32796714 - 102012528 AGCD01015782;AGCD01015783;GBCQ01059662;XM_005380391;XM_005380392;XR_001233167;XR_001233168;XR_001233169;XR_001233170;XR_260218;XR_260219;XR_260220;XR_260221 XP_005380448;XP_005380449 MODEL 8850729 protein-coding LOC102010298 liver carboxylesterase 1 NW_004955433 13504228 13538598 - 102010298 AGCD01031693;AGCD01031694;AGCD01031695;GBBH01016309;XM_005388336;XM_013516222 XP_005388393;XP_013371676 MODEL 8945805 ncrna LOC102018513 uncharacterized LOC102018513 NW_004955426 16028415 16032540 + 102018513 AGCD01026457;GBDF01159738;XR_261197 MODEL 8793401 protein-coding Ppp4r3a protein phosphatase 4 regulatory subunit 3A INVOLVED IN positive regulation of gluconeogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955438 13731900 13769189 - 102019325 AGCD01035303;AGCD01035304;GBDI01127180;XM_005390304;XM_005390305 XP_005390361;XP_005390362 MODEL 8785792 protein-coding Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 INVOLVED IN apoptotic process (ortholog); cellular response to glucose starvation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN Bcl-2 family protein complex (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955402 44005517 44010722 + 102015363 AGCD01001085;GBDJ01234034;XM_005373005;XM_005373006 XP_005373062;XP_005373063 MODEL 730468984 snorna SNORA43 Small nucleolar RNA SNORA43 9012536 protein-coding Picalm phosphatidylinositol binding clathrin assembly protein ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); clathrin binding (ortholog); clathrin heavy chain binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); axonogenesis (ortholog); clathrin coat assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); clathrin coat of coated pit (ortholog); clathrin-coated pit (ortholog) NW_004955414 6871220 6970569 + 102013160 AGCD01014940;AGCD01014941;AGCD01014942;AGCD01014943;AGCD01014944;GBCE01054676;GBDF01008904;XM_005379748 XP_005379805 MODEL 8735993 protein-coding Sox6 SRY-box transcription factor 6 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN astrocyte differentiation (ortholog); brain development (ortholog); cardiac muscle cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955414 30965626 31532473 - 102027517 AGCD01015742;AGCD01015743;AGCD01015744;AGCD01015745;AGCD01015746;AGCD01015747;AGCD01015748;AGCD01015749;AGCD01015750;AGCD01015751;AGCD01015752;AGCD01015753;AGCD01015754;GBDF01281648;XM_005380342;XM_005380343;XM_005380355;XM_005380356;XM_005380357;XM_013511913;XM_013511914;XM_013511915;XM_013511916;XM_013511917;XM_013511918;XM_013511919;XM_013511920;XM_013511921;XM_013511922;XM_013511923;XM_013511924;XM_013511925;XM_013511926;XM_013511927;XM_013511928;XM_013511929;XM_013511930;XM_013511931;XM_013511932;XM_013511933 XP_005380399;XP_005380400;XP_005380412;XP_005380413;XP_005380414;XP_013367367;XP_013367368;XP_013367369;XP_013367370;XP_013367371;XP_013367372;XP_013367373;XP_013367374;XP_013367375;XP_013367376;XP_013367377;XP_013367378;XP_013367379;XP_013367380;XP_013367381;XP_013367382;XP_013367383;XP_013367384;XP_013367385;XP_013367386;XP_013367387 MODEL 8834059 protein-coding Rep15 RAB15 effector protein INVOLVED IN receptor recycling (ortholog); transferrin transport (ortholog); FOUND IN early endosome membrane (ortholog); endosome membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955505 7189592 7190928 - 102021262 AGCD01065201;GBDJ01171786;XM_005407162 XP_005407219 MODEL 8966062 protein-coding Tm6sf1 transmembrane 6 superfamily member 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955416 13561872 13584238 - 102011657 AGCD01017226;GBBH01041009;GBDJ01421809;XM_013512567 XP_013368021 MODEL 39133358 snorna snoU85 Small nucleolar RNA U85 8949870 protein-coding Rtp5 receptor transporter protein 5 (putative) ASSOCIATED WITH uterine carcinosarcoma (ortholog) NW_004955542 40344 43885 - 102029120 AGCD01071456;XM_005411103 XP_005411160 MODEL 8768047 protein-coding Rpn1 ribophorin I INVOLVED IN glycoprotein biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955429 15204848 15231547 + 102022726 AGCD01028797;AGCD01028798;GBDF01192724;XM_005387036 XP_005387093 MODEL 9040604 protein-coding Trim3 tripartite motif containing 3 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN neural precursor cell proliferation (ortholog); positive regulation of toll-like receptor 3 signaling pathway (ortholog); protein K63-linked ubiquitination (ortholog); ASSOCIATED WITH autistic disorder (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); glutamatergic synapse (ortholog) NW_004955414 22181999 22207244 - 102021962 AGCD01015448;GBCE01154433;XM_005380144;XM_005380145;XM_005380146 XP_005380201;XP_005380202;XP_005380203 MODEL 39133558 snorna U3 Small nucleolar RNA U3 8829011 protein-coding Psmd6 proteasome 26S subunit, non-ATPase 6 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog) NW_004955517 1874874 1886480 + 102017692 AGCD01067609;AGCD01067610;GBDF01002254;XM_005409021 XP_005409078 MODEL 39132057 snorna SNORD18 Small nucleolar RNA SNORD18 39133515 snrna U4 U4 spliceosomal RNA 730469228 snorna SNORA25 Small nucleolar RNA SNORA25 8996389 ncrna LOC102009100 uncharacterized LOC102009100 NW_004955523 130276 134656 - 102009100 AGCD01068435;XR_001231912 MODEL 8945647 protein-coding LOC102008338 olfactory receptor 5W2-like NW_004955511 810336 811271 + 102008338 AGCD01066344;XM_005408211 XP_005408268 MODEL 8725773 protein-coding Pus7 pseudouridine synthase 7 ENCODES a protein that exhibits enzyme binding (ortholog); pseudouridine synthase activity (ortholog); tRNA pseudouridine synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog); negative regulation of translation (ortholog); regulation of hematopoietic stem cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); anemia (ortholog); FOUND IN nucleus (ortholog) NW_004955410 10062768 10119751 - 102022260 AGCD01010788;AGCD01010789;AGCD01010790;AGCD01010791;GBDJ01004561;XM_005377246;XM_013510649;XM_013510650 XP_005377303;XP_013366103;XP_013366104 MODEL 8884037 protein-coding Ermard ER membrane associated RNA degradation ASSOCIATED WITH periventricular nodular heterotopia (ortholog); periventricular nodular heterotopia 6 (ortholog) NW_004955411 3838125 3866282 - 102018814 AGCD01011556;GBDK01058947;XM_005377629;XM_005377630;XM_005377631;XM_005377632;XM_005377633;XM_005377634;XM_013510740;XM_013510742 XP_005377686;XP_005377687;XP_005377688;XP_005377689;XP_005377690;XP_005377691;XP_013366194;XP_013366196 MODEL 8870579 protein-coding LOC102018514 L-xylulose reductase NW_004955506 1135924 1137671 + 102018514 AGCD01065246;GBDK01008359;XM_005407226 XP_005407283 MODEL 8747775 protein-coding Sh3bp5l SH3 binding domain protein 5 like ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955418 29884660 29893611 - 102019063 AGCD01019488;GBDF01276737;XM_005382328;XM_013513008 XP_005382385;XP_013368462 MODEL 9058628 pseudo LOC102011913 60S ribosomal protein L35 pseudogene NW_004955545 891588 891958 - 102011913 AGCD01071824 MODEL 8910677 ncrna LOC102019697 uncharacterized LOC102019697 NW_004955481 6570579 6592910 + 102019697 AGCD01057031;AGCD01057032;GBDK01219721;XR_001230949 MODEL 8861576 ncrna LOC102013495 uncharacterized LOC102013495 NW_004955468 8052975 8220399 + 102013495 AGCD01052019;AGCD01052020;AGCD01052021;AGCD01052022;AGCD01052023;GBCQ01143499;XR_001236948;XR_263403;XR_263404 MODEL 8771780 protein-coding Tm6sf2 transmembrane 6 superfamily member 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of lipid metabolic process (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) NW_004955524 2586201 2593123 + 102010403 AGCD01068823;GBCQ01094307;XM_005409623 XP_005409680 MODEL 8887677 ncrna LOC102005017 uncharacterized LOC102005017 NW_004955466 5718966 5721167 + 102005017 AGCD01050888;GBDF01281132;XR_001236796 MODEL 8770267 ncrna LOC102006093 uncharacterized LOC102006093 NW_004955452 11238563 11263569 + 102006093 AGCD01044333;GBBH01084072;XR_001236059;XR_001236060;XR_001236061;XR_001236062;XR_262679 MODEL 8907210 protein-coding Repin1 replication initiator 1 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of D-glucose import across plasma membrane (ortholog); regulation of fatty acid transport (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); lipid droplet (ortholog) NW_004955491 4973192 4977970 + 102018610 AGCD01060466;GBDF01002881;XM_005404768;XM_005404772;XM_005404774;XM_013504594 XP_005404825;XP_005404829;XP_005404831;XP_013360048 MODEL 8810371 pseudo LOC102006441 rRNA-processing protein UTP23 homolog pseudogene NW_004955412 35586005 35587704 - 102006441 AGCD01013412 MODEL 39131740 snorna SNORA70 Small nucleolar RNA SNORA70 8705779 protein-coding LOC102007563 uncharacterized LOC102007563 NW_004955493 470268 489066 - 102007563 AGCD01060852;AGCD01060853;AGCD01060854;GBDJ01366389;XM_013504742 XP_013360196 MODEL 9066283 protein-coding Rnf213 ring finger protein 213 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); defense response to bacterium (ortholog); lipid droplet formation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955506 2498339 2598363 - 102018624 AGCD01065296;AGCD01065297;GBDK01018833;XM_013506013;XM_013506014;XM_013506015 XP_013361467;XP_013361468;XP_013361469 MODEL 9003969 protein-coding LOC102012322 galectin-5-like NW_004955481 5560268 5566976 - 102012322 AGCD01056994;AGCD01056995;GBDK01183989;XM_005402780 XP_005402837 MODEL 8811268 protein-coding Spns1 SPNS lysolipid transporter 1, lysophospholipid ENCODES a protein that exhibits lysophospholipid:sodium symporter activity (ortholog); INVOLVED IN lysophospholipid transport (ortholog); phospholipid efflux (ortholog); regulation of lysosome organization (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN lysosome (ortholog) NW_004955493 6506449 6514308 - 102011672 AGCD01061118;GBDF01086563;XM_005405152;XM_005405153 XP_005405209;XP_005405210 MODEL 8759181 ncrna LOC102016548 uncharacterized LOC102016548 NW_004955451 6983963 6987127 - 102016548 AGCD01043220;GBDK01225635;XR_262587 MODEL 8729976 protein-coding Serinc1 serine incorporator 1 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); enzyme binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN membrane biogenesis (ortholog); phosphatidylserine metabolic process (ortholog); sphingolipid metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955436 4414629 4435353 - 102025505 AGCD01033663;AGCD01033664;AGCD01033665;GBCE01004273;XM_005389150 XP_005389207 MODEL 8985996 pseudo LOC102003264 PHD finger protein 7-like NW_004955429 11735749 11737540 - 102003264 AGCD01028693 MODEL 8833482 protein-coding Sstr3 somatostatin receptor 3 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to glucocorticoid stimulus (ortholog); cerebellum development (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); Experimental Diabetes Mellitus (ortholog); neuroendocrine tumor (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary membrane (ortholog); cilium (ortholog) NW_004955413 23677693 23683939 - 102029066 AGCD01014333;GBDK01269462;XM_005379193;XM_005379194 XP_005379250;XP_005379251 MODEL 9029607 protein-coding Wfs1 wolframin ER transmembrane glycoprotein ENCODES a protein that exhibits ATPase binding (ortholog); calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ASSOCIATED WITH anemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); secretory granule (ortholog) NW_004955514 3902508 3924281 - 102020042 AGCD01067119;AGCD01067120;AGCD01067121;GBCB01055926;GBDK01133953;XM_013506848 XP_013362302 MODEL 8993754 protein-coding Rimklb ribosomal modification protein rimK like family member B ENCODES a protein that exhibits citrate-L-glutamate ligase activity (ortholog); N-acetyl-L-aspartate-L-glutamate ligase activity (ortholog); INVOLVED IN L-glutamate catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955413 6298833 6362812 - 102024326 AGCD01013724;AGCD01013725;AGCD01013726;AGCD01013727;AGCD01013728;AGCD01013729;AGCD01013730;GBDI01255536;XM_013511616;XM_013511617;XR_001233028;XR_001233029;XR_001233030 XP_013367070;XP_013367071 MODEL 8878597 pseudo LOC102009101 DNA-directed RNA polymerases I, II, and III subunit RPABC1 pseudogene NW_004955434 8689984 8692539 - 102009101 AGCD01032262 MODEL 8986751 protein-coding Por P450 (cytochrome) oxidoreductase ENCODES a protein that exhibits cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); electron transfer activity (ortholog); enzyme activator activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to gonadotropin stimulus (ortholog); PARTICIPATES IN aldosterone biosynthetic pathway; cortisol biosynthetic pathway; doxorubicin pharmacokinetics pathway; ASSOCIATED WITH amenorrhea (ortholog); Antley-Bixler syndrome (ortholog); Antley-Bixler syndrome with disordered steroidogenesis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955456 14698589 14748520 + 102006877 AGCD01046650;GBDI01012447;XM_005396803;XM_013520565 XP_005396860;XP_013376019 MODEL 8924925 pseudo LOC102008732 cytochrome b-c1 complex subunit 7-like NW_004955484 9493540 9493755 - 102008732 AGCD01058418 MODEL 9060584 trna trnW(tca) tRNA-Trp MT 4942 5010 + 15822204 8940048 ncrna LOC102004290 uncharacterized LOC102004290 NW_004955493 4019353 4020906 - 102004290 AGCD01061023;GBDF01277572;XR_264081 MODEL 8771794 protein-coding Slc45a3 solute carrier family 45 member 3 ENCODES a protein that exhibits sucrose:proton symporter activity (ortholog); INVOLVED IN positive regulation of fatty acid biosynthetic process (ortholog); positive regulation of glucose metabolic process (ortholog); regulation of oligodendrocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955406 41362077 41381981 - 102010669 AGCD01006678;AGCD01006679;GBDK01319488;XM_005375364;XM_005375368;XM_013522930;XM_013522934;XM_013522936;XM_013522940;XM_013522943 XP_005375421;XP_005375425;XP_013378384;XP_013378388;XP_013378390;XP_013378394;XP_013378397 MODEL 9055009 pseudo LOC102011060 MICOS complex subunit MIC27 pseudogene NW_004955444 6968368 6969142 - 102011060 AGCD01038884 MODEL 8707874 ncrna LOC102010301 uncharacterized LOC102010301 NW_004955524 791217 792333 + 102010301 AGCD01068708;GBDF01013580;XR_001231946 MODEL 8742383 protein-coding Lrp1 LDL receptor related protein 1 ENCODES a protein that exhibits alpha-2 macroglobulin receptor activity (ortholog); apolipoprotein binding (ortholog); calcium ion binding (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); amyloid-beta clearance by transcytosis (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); FOUND IN apical part of cell (ortholog); axonal growth cone (ortholog); basolateral plasma membrane (ortholog) NW_004955458 4861431 4941939 + 102021525 AGCD01047443;AGCD01047444;AGCD01047445;GBCE01001876;XM_005397348 XP_005397405 MODEL 10322399 protein-coding LOC106147522 uncharacterized LOC106147522 NW_004955574 66400 68449 + 106147522 AGCD01075083;XM_013509503 XP_013364957 MODEL 8722054 protein-coding Prpf38a pre-mRNA processing factor 38A INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); precatalytic spliceosome (ortholog) NW_004955464 6742200 6761059 - 102021106 AGCD01050038;GBDJ01016093;XM_005398588 XP_005398645 MODEL 8767644 ncrna LOC102005728 uncharacterized LOC102005728 NW_004955424 27059476 27098465 + 102005728 AGCD01025100;GBDF01207365;XR_261110;XR_261111 MODEL 8873090 protein-coding Psmd7 proteasome 26S subunit, non-ATPase 7 ENCODES a protein that exhibits protein homodimerization activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) NW_004955484 6824467 6832251 + 102021244 AGCD01058294;GBDF01003955;XM_005403534 XP_005403591 MODEL 8927989 protein-coding LOC102011504 keratin-associated protein 8-1 NW_004955407 30527468 30528014 - 102011504 AGCD01007636;XM_005375654 XP_005375711 MODEL 9032650 protein-coding LOC102022569 neural Wiskott-Aldrich syndrome protein-like NW_004955457 15824734 15826663 + 102022569 AGCD01047099;GBCQ01093605;XM_005397108 XP_005397165 MODEL 730469096 snorna snoU89 Small nucleolar RNA U89 8923055 ncrna LOC102020009 uncharacterized LOC102020009 NW_004955417 16241947 16248800 - 102020009 AGCD01018255;GBDJ01106535;XR_260478 MODEL 9040917 protein-coding Pus7l pseudouridine synthase 7 like ENCODES a protein that exhibits pseudouridine synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955500 2992767 3010129 - 102006048 AGCD01063724;GBCE01022554;GBCE01034445;XM_005406586 XP_005406643 MODEL 39133561 snorna U3 Small nucleolar RNA U3 8937013 protein-coding Sstr5 somatostatin receptor 5 ENCODES a protein that exhibits somatostatin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to glucocorticoid stimulus (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN bipolar disorder pathway; ASSOCIATED WITH bipolar disorder (ortholog); cervical cancer (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955442 16169069 16176054 - 102013221 AGCD01037893;XM_005391595 XP_005391652 MODEL 8880619 protein-coding Rtraf RNA transcription, translation and transport factor ENCODES a protein that exhibits identical protein binding (ortholog); RNA binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); mitotic spindle (ortholog) NW_004955409 11034815 11049400 - 102012165 AGCD01009497;AGCD01009498;AY533217;GBCB01006025;XM_005376787 AAS59420;XP_005376844 MODEL 8943180 protein-coding Trim32 tripartite motif containing 32 ENCODES a protein that exhibits identical protein binding (ortholog); myosin binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN actin ubiquitination (ortholog); antiviral innate immune response (ortholog); autophagosome assembly (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2H (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 11 (ortholog); FOUND IN autophagosome (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955419 11151751 11168046 - 102003875 AGCD01019953;GBDF01241008;XM_005382612;XM_005382613;XM_005382614;XM_005382615;XM_005382616;XM_013513264 XP_005382669;XP_005382670;XP_005382671;XP_005382672;XP_005382673;XP_013368718 MODEL 39132055 snorna SNORD18 Small nucleolar RNA SNORD18 730468993 snorna SNORA43 Small nucleolar RNA SNORA43 39133517 snrna U4 U4 spliceosomal RNA 39131741 snorna SNORA70 Small nucleolar RNA SNORA70 730469033 snorna SNORA25 Small nucleolar RNA SNORA25 8782340 protein-coding Sox7 SRY-box transcription factor 7 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN endoderm formation (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH congenital diaphragmatic hernia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955403 52253816 52259884 - 102024079 AGCD01003003;GBDJ01190984;XM_005373806 XP_005373863 MODEL 9001641 protein-coding Pick1 protein interacting with PRKCA 1 ENCODES a protein that exhibits actin filament binding (ortholog); Arp2/3 complex binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); cellular response to decreased oxygen levels (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955413 24383130 24399092 + 102014342 AGCD01014363;AGCD01014364;GBDI01135012;XM_005379238;XM_005379240 XP_005379295;XP_005379297 MODEL 8801248 pseudo LOC102010302 glutathione S-transferase Mu 1-like NW_004955435 13225086 13240501 + 102010302 AGCD01033197;AGCD01033198;AGCD01033199 MODEL 8820311 ncrna LOC102008342 uncharacterized LOC102008342 NW_004955432 20887908 20912192 - 102008342 AGCD01031210;GBDF01207508;XR_261537 MODEL 8936851 pseudo LOC102005731 UPF0711 protein C18orf21 pseudogene NW_004955426 5300983 5301585 + 102005731 AGCD01026120 MODEL 8844030 protein-coding Pla2g5 phospholipase A2 group V ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); heparin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN arachidonate secretion (ortholog); leukotriene biosynthetic process (ortholog); low-density lipoprotein particle remodeling (ortholog); ASSOCIATED WITH familial benign fleck retina (ortholog); late-onset retinal degeneration (ortholog); sarcoma (ortholog); FOUND IN cell surface (ortholog); early phagosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955452 662281 721507 + 102015593 AGCD01043822;AGCD01043823;AGCD01043824;AGCD01043825;AGCD01043826;AGCD01043827;GBDJ01199830;XM_005394670;XM_005394671;XM_005394672;XM_013519728;XM_013519729;XM_013519730 XP_005394727;XP_005394728;XP_005394729;XP_013375182;XP_013375183;XP_013375184 MODEL 8900219 protein-coding Rb1 RB transcriptional corepressor 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); apoptotic process (ortholog); cell division (ortholog); PARTICIPATES IN ceramide signaling pathway; G1/S transition pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN chromatin lock complex (ortholog); cyclin/CDK positive transcription elongation factor complex (ortholog); cytoplasm (ortholog) NW_004955431 1960765 2124576 + 102016082 AGCD01029919;AGCD01029920;AGCD01029921;AGCD01029922;AGCD01029923;GBCQ01126218;XM_005387557 XP_005387614 MODEL 8887014 protein-coding Ppp4r3b protein phosphatase 4 regulatory subunit 3B INVOLVED IN positive regulation of gluconeogenesis (ortholog); regulation of double-strand break repair (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955424 27461919 27520649 + 102007034 AGCD01025118;GBCB01042305;GBDF01005409;XM_013514663;XM_013514664;XM_013514665;XM_013514666 XP_013370117;XP_013370118;XP_013370119;XP_013370120 MODEL 8803725 ncrna LOC102018521 uncharacterized LOC102018521 NW_004955515 3179303 3190163 + 102018521 AGCD01067274;GBDI01275277;XR_264522;XR_264523 MODEL 8793365 protein-coding Rpn2 ribophorin II ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN autophagosome membrane (ortholog); endoplasmic reticulum (ortholog); oligosaccharyltransferase complex (ortholog) NW_004955422 24497288 24550439 - 102018104 AGCD01023220;AGCD01023221;AGCD01023222;AGCD01023223;GBCE01029632;XM_005384722;XM_005384723 XP_005384779;XP_005384780 MODEL 9005605 ncrna LOC102013496 uncharacterized LOC102013496 NW_004955414 14859238 14895910 - 102013496 AGCD01015161;GBDF01156200;XR_260169;XR_260170 MODEL 9035663 protein-coding Sh3d19 SH3 domain containing 19 ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN positive regulation of membrane protein ectodomain proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955471 5724303 5810868 - 102023256 AGCD01053113;GBDJ01086123;GBDK01085587;XM_013522884;XM_013522885;XM_013522886;XM_013522887 XP_013378338;XP_013378339;XP_013378340;XP_013378341 MODEL 8984092 protein-coding LOC102019700 carbohydrate sulfotransferase 6 NW_004955484 2028332 2038105 + 102019700 AGCD01058079;AGCD01058080;AGCD01058081;GBDF01189982;XM_005403442;XM_005403443;XM_005403444;XM_005403445;XM_013503855;XM_013503856 XP_005403499;XP_005403500;XP_005403501;XP_005403502;XP_013359309;XP_013359310 MODEL 8932790 protein-coding Ca8 carbonic anhydrase 8 (inactive) INVOLVED IN positive regulation of calcium-mediated signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); autosomal recessive spinocerebellar ataxia 34 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955444 18414006 18510800 + 102015251 AGCD01039238;AGCD01039239;AGCD01039240;AGCD01039241;AGCD01039242;GBCE01129803;GBDJ01215247;XM_013518186 XP_013373640 MODEL 8985440 pseudo LOC102011914 N-alpha-acetyltransferase 50 pseudogene NW_004955441 5500863 5501537 + 102011914 AGCD01036878 MODEL 8865820 protein-coding Tm7sf2 transmembrane 7 superfamily member 2 ENCODES a protein that exhibits Delta14-sterol reductase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); signaling receptor complex (ortholog) NW_004955422 20086994 20091707 - 102016926 AGCD01023064;GBDK01319887;XM_005384517 XP_005384574 MODEL 8827910 ncrna LOC102005020 uncharacterized LOC102005020 NW_004955467 11742739 11757242 - 102005020 AGCD01051616;AGCD01051617;GBDF01289227;XR_263362 MODEL 8784960 protein-coding LOC102006094 intestinal-type alkaline phosphatase-like NW_004955453 3530091 3533832 + 102006094 AGCD01044662;AGCD01044663;XM_005395706 XP_005395763 MODEL 8827365 protein-coding Porcn porcupine O-acyltransferase ENCODES a protein that exhibits palmitoleoyltransferase activity (ortholog); Wnt-protein binding (ortholog); INVOLVED IN glycoprotein metabolic process (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH brain disease (ortholog); colon adenocarcinoma (ortholog); Developmental Disabilities (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955543 75870 91575 + 102018334 AGCD01071556;AGCD01071557;GBDK01394558;XM_005411256;XM_005411257;XM_013508161;XM_013508162;XM_013508163;XM_013508164 XP_005411313;XP_005411314;XP_013363615;XP_013363616;XP_013363617;XP_013363618 MODEL 8988258 protein-coding LOC102007567 uncharacterized LOC102007567 NW_004955494 1182666 1184612 - 102007567 AGCD01061392;GBDI01027077;XM_005405391 XP_005405448 MODEL 8844732 protein-coding LOC102006443 natural killer cells antigen CD94-like NW_004955413 7595934 7604789 - 102006443 AGCD01013826;AGCD01013827;GBDF01001494;XM_005378931;XR_260067;XR_260068 XP_005378988 MODEL 8924825 trna trnY(gta) tRNA-Tyr MT 5259 5325 - 15822224 8844984 protein-coding LOC102012324 olfactory receptor 14I1-like NW_004955418 30244034 30244983 + 102012324 AGCD01019507;XM_013512881 XP_013368335 MODEL 8932406 protein-coding Reps1 RALBP1 associated Eps domain containing 1 ENCODES a protein that exhibits SH3 domain binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN clathrin-coated pit (ortholog); plasma membrane (ortholog) NW_004955436 20677676 20752842 + 102014485 AGCD01034035;AGCD01034036;AGCD01034037;AGCD01034038;GBBH01164522;GBBH01164524;XM_005389265;XM_005389266 XP_005389322;XP_005389323 MODEL 8802878 protein-coding LOC102008750 rho GTPase-activating protein 21-like NW_004955503 2090544 2097475 + 102008750 AGCD01064595;AGCD01064596;XM_013505847 XP_013361301 MODEL 8875344 protein-coding LOC102004294 cytochrome P450 4F22 ENCODES a protein that exhibits monooxygenase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); atopic dermatitis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955495 7730881 7763684 - 102004294 AGCD01062162;AGCD01062163;GBDF01280840;XM_005406064;XM_013505318 XP_005406121;XP_013360772 MODEL 8941173 protein-coding Rnf214 ring finger protein 214 ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog) NW_004955412 18555881 18594341 + 102026200 AGCD01012945;GBDF01190701;GBDI01179777;XM_013511026 XP_013366480 MODEL 9025901 protein-coding LOC102016550 hemicentin-1-like NW_004955835 7426 16611 - 102016550 AGCD01078452;GBCQ01155248;GBDK01321888;XM_005415127 XP_005415184 MODEL 8886352 protein-coding Serinc2 serine incorporator 2 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN phosphatidylserine metabolic process (ortholog); plasma membrane phospholipid scrambling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955452 9905152 9914943 + 102008911 AGCD01044263;GBBH01064457;GBDI01080614;XM_013519725 XP_013375179 MODEL 730469068 snorna snoU89 Small nucleolar RNA U89 9042418 protein-coding LOC102009114 olfactory receptor 1F1-like NW_004955442 14172448 14196764 - 102009114 AGCD01037803;AGCD01037804;AGCD01037805;AGCD01037806;GBDF01061825;XM_005391855 XP_005391912 MODEL 9059646 protein-coding Pusl1 pseudouridine synthase like 1 ENCODES a protein that exhibits tRNA pseudouridine(38-40) synthase activity (ortholog); INVOLVED IN tRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955486 9491613 9494746 - 102025803 AGCD01059188;GBCB01051116;XM_005404237;XM_013504191;XM_013504193;XM_013504194 XP_005404294;XP_013359645;XP_013359647;XP_013359648 MODEL 39133518 snrna U4 U4 spliceosomal RNA 8707558 protein-coding Rimoc1 RAB7A interacting MON1-CCZ1 complex subunit 1 INVOLVED IN mitophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955426 26026284 26040311 + 102027428 AGCD01026735;GBCE01122894;XM_005386249;XM_005386250;XM_005386251;XM_013514996;XM_013514997 XP_005386306;XP_005386307;XP_005386308;XP_013370450;XP_013370451 MODEL 9019231 protein-coding LOC102003265 ankyrin repeat domain-containing protein 26-like NW_004955510 3513464 3597054 + 102003265 AGCD01066239;AGCD01066240;AGCD01066241;AGCD01066242;GBDF01123488;XM_005407878 XP_005407935 MODEL 8836264 pseudo LOC102012334 60S ribosomal protein L21 pseudogene NW_004955422 13359228 13359730 + 102012334 AGCD01022822;XM_005384951 MODEL 8872121 ncrna LOC102011505 uncharacterized LOC102011505 NW_004955456 6097044 6102845 - 102011505 AGCD01046363;GBDF01134376;XR_262883 MODEL 730469132 snorna SNORA25 Small nucleolar RNA SNORA25 9040876 protein-coding Whamm WASP homolog associated with actin, golgi membranes and microtubules ENCODES a protein that exhibits Arp2/3 complex binding (ortholog); microtubule binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin filament organization (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); focal adhesion assembly (ortholog); ASSOCIATED WITH Fanconi syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog) NW_004955416 13825925 13849883 - 102005372 AGCD01017234;AGCD01017235;GBBH01172264;GBCB01026385;XM_013512488 XP_013367942 MODEL 8791428 protein-coding LOC102022571 low affinity immunoglobulin gamma Fc region receptor III-like NW_004955462 14728809 14740340 - 102022571 AGCD01049456;GBBH01117101;XM_005398310;XM_013521433;XM_013521434 XP_005398367;XP_013376887;XP_013376888 MODEL 8754239 pseudo LOC102016551 60S ribosomal protein L12-like NW_004955403 47273269 47306341 - 102016551 AGCD01002884;AGCD01002885;XR_259282 MODEL 9029478 protein-coding Sox8 SRY-box transcription factor 8 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); astrocyte fate commitment (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Joubert syndrome (ortholog); peripheral nervous system disease (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955442 16236286 16241093 - 102013559 AGCD01037893;GBBH01171342;XM_005391596 XP_005391653 MODEL 8972170 pseudo LOC102005734 deoxynucleotidyltransferase terminal-interacting protein 2 pseudogene NW_004955428 1136198 1138064 + 102005734 AGCD01027605 MODEL 39133564 snorna U3 Small nucleolar RNA U3 9063130 protein-coding Pla2g6 phospholipase A2 group VI ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); ATP-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN antibacterial humoral response (ortholog); cardiolipin acyl-chain remodeling (ortholog); maternal process involved in female pregnancy (ortholog); PARTICIPATES IN angiotensin II signaling pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Adducted Thumbs Syndrome (ortholog); anemia (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); mitochondrion (ortholog) NW_004955413 24431592 24482229 - 102015394 AGCD01014367;AGCD01014368;GBBH01227983;XM_005379242;XM_005379243 XP_005379299;XP_005379300 MODEL 9016517 protein-coding Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 ENCODES a protein that exhibits beta-1 adrenergic receptor binding (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN modulation of excitatory postsynaptic potential (ortholog); positive regulation of synaptic vesicle endocytosis (ortholog); regulation of synaptic vesicle endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955495 4502173 4531758 + 102009625 AGCD01061926;AGCD01061927;GBDF01121282;XM_005405800;XM_005405801 XP_005405857;XP_005405858 MODEL 8936219 ncrna LOC102006097 uncharacterized LOC102006097 NW_004955456 4283151 4286706 - 102006097 AGCD01046296;GBDF01251661;XR_262881 MODEL 9036921 protein-coding Ca9 carbonic anhydrase 9 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); molecular function activator activity (ortholog); zinc ion binding (ortholog); INVOLVED IN morphogenesis of an epithelium (ortholog); response to hypoxia (ortholog); response to testosterone (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Anaplasia (ortholog); breast carcinoma (ortholog); chronic myelogenous leukemia, BCR-ABL1 positive (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955472 619084 625570 - 102010361 AGCD01053342;AGCD01053343;GBCB01065795;XM_005401177 XP_005401234 MODEL 8964024 protein-coding Tm7sf3 transmembrane 7 superfamily member 3 INVOLVED IN cellular response to unfolded protein (ortholog); negative regulation of programmed cell death (ortholog); positive regulation of insulin secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955413 21847695 21890449 - 102007533 AGCD01014268;AGCD01014269;AGCD01014270;AGCD01014271;AGCD01014272;GBBH01076281;XM_005379116;XM_005379117 XP_005379173;XP_005379174 MODEL 730469003 snorna SNORA43 Small nucleolar RNA SNORA43 8892486 protein-coding Postn periostin ENCODES a protein that exhibits heparin binding (ortholog); metal ion binding (ortholog); INVOLVED IN bone regeneration (ortholog); cell adhesion (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); aggressive periodontitis (ortholog); aspirin-induced respiratory disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955431 8510646 8544901 + 102022213 AGCD01030127;AGCD01030128;GBDI01138507;XM_005387655;XM_005387656;XM_005387657;XM_005387658;XM_005387659;XM_005387661;XM_013515886 XP_005387712;XP_005387713;XP_005387714;XP_005387715;XP_005387716;XP_005387718;XP_013371340 MODEL 8801405 protein-coding Prpf38b pre-mRNA processing factor 38B ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); High Myopia (ortholog) NW_004955435 12162730 12172136 + 102019729 AGCD01033135;GBDJ01081283;XM_005388832 XP_005388889 MODEL 8802796 protein-coding LOC102006450 cytochrome c oxidase assembly factor 5 INVOLVED IN copper ion homeostasis (ortholog); leukocyte differentiation (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 2 (ortholog); mitochondrial complex IV deficiency nuclear type 9 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955470 5042072 5051007 - 102006450 AGCD01052743;GBCE01159196;XM_005400725 XP_005400782 MODEL 8822420 pseudo LOC102007568 calcyclin-binding protein pseudogene NW_004955495 2910765 2911344 - 102007568 AGCD01061810 MODEL 10128233 ncrna LOC106147523 uncharacterized LOC106147523 NW_004955574 1203934 1206178 + 106147523 AGCD01075164;GBBH01114482;XR_001232448 MODEL 9010348 ncrna LOC102008756 uncharacterized LOC102008756 NW_004955429 17376692 17378662 + 102008756 AGCD01028854;GBDF01303361;XR_001234496 MODEL 8872991 protein-coding Ermn ermin ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament organization (ortholog); morphogenesis of a branching structure (ortholog); regulation of cell projection organization (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); filopodium (ortholog) NW_004955449 16056735 16064734 + 102017079 AGCD01042208;GBDK01341423;XM_005393411 XP_005393468 MODEL 9035918 protein-coding Reps2 RALBP1 associated Eps domain containing 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); developmental and epileptic encephalopathy 1 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955519 1131027 1358313 - 102005076 AGCD01067882;AGCD01067883;AGCD01067884;AGCD01067885;AGCD01067886;AGCD01067887;AGCD01067888;AGCD01067889;GBCE01084254;GBDJ01193078;XM_005409136 XP_005409193 MODEL 8992440 protein-coding LOC102010304 protein LEG1 homolog NW_004955436 8564756 8573875 + 102010304 AGCD01033743;GBBH01076388;XM_005389173 XP_005389230 MODEL 8804149 pseudo LOC102008343 40S ribosomal protein S6 pseudogene NW_004955515 3520030 3520862 + 102008343 AGCD01067288 MODEL 8707413 ncrna LOC102020011 uncharacterized LOC102020011 NW_004955483 8366749 8377144 - 102020011 AGCD01057833;GBDF01162005;XR_001231025;XR_263868 MODEL 8976729 protein-coding Pid1 phosphotyrosine interaction domain containing 1 INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to fatty acid (ortholog); cellular response to interleukin-6 (ortholog); ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955453 5680418 5913236 + 102005004 AGCD01044712;AGCD01044713;AGCD01044714;GBDJ01190629;XM_013519988 XP_013375442 MODEL 8993017 protein-coding Pmch pro-melanin concentrating hormone ENCODES a protein that exhibits melanin-concentrating hormone activity (ortholog); type 1 melanin-concentrating hormone receptor binding (ortholog); INVOLVED IN drinking behavior (ortholog); feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Insulin Resistance (ortholog); obesity (ortholog); sleeping sickness (ortholog); FOUND IN extracellular region (ortholog); nucleus (ortholog) NW_004955405 37357468 37360695 - 102029697 AGCD01005452;GBBH01147925;XM_005374562 XP_005374619 MODEL 8898763 protein-coding Rb1cc1 RB1 inducible coiled-coil 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); defense response to virus (ortholog); PARTICIPATES IN autophagy pathway; mTOR signaling pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) NW_004955454 12201566 12257383 - 102029826 AGCD01045405;AGCD01045406;AGCD01045407;GBDF01043542;XM_013520171 XP_013375625 MODEL 8958675 ncrna LOC102018523 uncharacterized LOC102018523 NW_004955434 172998 207712 + 102018523 AGCD01031998;AGCD01031999;AGCD01032000;GBCQ01181420;XR_001234825;XR_001234826;XR_261605 MODEL 8977401 protein-coding Slc46a1 solute carrier family 46 member 1 ENCODES a protein that exhibits folic acid transmembrane transporter activity (ortholog); folic acid:proton symporter activity (ortholog); heme transmembrane transporter activity (ortholog); INVOLVED IN folate import across plasma membrane (ortholog); folate transmembrane transport (ortholog); folic acid transport (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; folate cycle metabolic pathway; folate metabolic pathway; ASSOCIATED WITH anemia (ortholog); chronic kidney disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) NW_004955481 4735325 4741810 + 102004814 AGCD01056950;GBDK01190488;XM_005402755 XP_005402812 MODEL 8894400 protein-coding Rttn rotatin INVOLVED IN determination of left/right symmetry (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aplastic anemia (ortholog); autistic disorder (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955402 53600985 53753218 - 102005430 AGCD01001370;AGCD01001371;GBDF01281354;XM_005373054 XP_005373111 MODEL 8699890 protein-coding Ssu72 SSU72 homolog, RNA polymerase II CTD phosphatase ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH autosomal recessive osteopetrosis 4 (ortholog); liver disease (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955486 9317078 9338414 + 102018734 AGCD01059176;GBDF01003615;XM_005404212 XP_005404269 MODEL 8753411 ncrna LOC102009116 uncharacterized LOC102009116 NW_004955561 1295394 1311775 + 102009116 AGCD01073847;AGCD01073848;GBDF01260254;XR_001232356 MODEL 8996972 protein-coding Lrp10 LDL receptor related protein 10 ENCODES a protein that exhibits low-density lipoprotein particle receptor activity (ortholog); INVOLVED IN inner ear development (ortholog); lipid metabolic process (ortholog); lipid transport (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955409 37413471 37419485 - 102003098 AGCD01010512;AGCD01010513;GBDF01005600;GBDJ01017379;XM_005377114 XP_005377171 MODEL 9025237 protein-coding LOC102011061 olfactory receptor 7G2-like NW_004955563 307152 309101 - 102011061 AGCD01074060;XM_013509132;XM_013509133 XP_013364586;XP_013364587 MODEL 39131742 snorna SNORA70 Small nucleolar RNA SNORA70 8904836 protein-coding Trim33 tripartite motif containing 33 ENCODES a protein that exhibits co-SMAD binding (ortholog); promoter-specific chromatin binding (ortholog); R-SMAD binding (ortholog); INVOLVED IN gene expression (ortholog); negative regulation of BMP signaling pathway (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955435 17631596 17750261 - 102029788 AGCD01033362;AGCD01033363;AGCD01033364;GBDK01141829;XM_013516407 XP_013371861 MODEL 8860125 protein-coding Spns2 SPNS lysolipid transporter 2, sphingosine-1-phosphate INVOLVED IN B cell homeostasis (ortholog); bone development (ortholog); lipid transport (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 115 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955467 12405172 12441490 - 102012082 AGCD01051633;AGCD01051634;AGCD01051635;GBBH01187584;GBCQ01033750;XM_005399685;XM_013522148;XM_013522149 XP_005399742;XP_013377602;XP_013377603 MODEL 8906704 protein-coding Tro trophinin ASSOCIATED WITH Breast Cancer, Familial (ortholog); high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955475 2266522 2278016 + 102024454 AGCD01054800;GBDK01001381;XM_005401530;XM_013502848;XM_013502849;XM_013502850;XM_013502851;XM_013502852;XM_013502853 XP_005401587;XP_013358302;XP_013358303;XP_013358304;XP_013358305;XP_013358306;XP_013358307 MODEL 8739258 protein-coding Caap1 caspase activity and apoptosis inhibitor 1 INVOLVED IN negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955472 7937702 7993252 + 102027966 AGCD01053635;AGCD01053636;AGCD01053637;GBBH01101942;GBDF01086677;XM_013523025 XP_013378479 MODEL 8946223 ncrna LOC102003268 uncharacterized LOC102003268 NW_004955431 22677734 22698546 + 102003268 AGCD01030517;AGCD01030518;GBDF01235025;XR_001234627;XR_261493 MODEL 8836724 pseudo LOC102006453 small ubiquitin-related modifier 2-like NW_004955476 1102626 1103054 - 102006453 AGCD01055200 MODEL 8902797 protein-coding Rims1 regulating synaptic membrane exocytosis 1 ENCODES a protein that exhibits protein kinase binding (ortholog); SH3 domain binding (ortholog); small GTPase binding (ortholog); INVOLVED IN acrosomal vesicle exocytosis (ortholog); calcium ion-regulated exocytosis of neurotransmitter (ortholog); long-term synaptic potentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); autism spectrum disorder (ortholog); FOUND IN extrinsic component of presynaptic active zone membrane (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955488 6999128 7196583 + 102007439 AGCD01059669;AGCD01059670;AGCD01059671;AGCD01059672;AGCD01059673;AGCD01059674;GBBH01112718;XM_013504429;XM_013504430;XM_013504431;XM_013504432;XM_013504433;XM_013504434;XM_013504435;XM_013504436;XM_013504437;XM_013504438;XM_013504439;XM_013504440;XM_013504441;XM_013504442;XM_013504443;XM_013504444;XM_013504445;XM_013504446;XM_013504447 XP_013359883;XP_013359884;XP_013359885;XP_013359886;XP_013359887;XP_013359888;XP_013359889;XP_013359890;XP_013359891;XP_013359892;XP_013359893;XP_013359894;XP_013359895;XP_013359896;XP_013359897;XP_013359898;XP_013359899;XP_013359900;XP_013359901 MODEL 8904613 pseudo LOC102011508 small glutamine-rich tetratricopeptide repeat-containing protein beta pseudogene NW_004955458 14795983 14797440 + 102011508 AGCD01047847 MODEL 8804578 protein-coding LOC102022572 indolethylamine N-methyltransferase NW_004955410 31925147 31930528 + 102022572 AGCD01011334;GBCE01074653;XM_005377506 XP_005377563 MODEL 9012587 pseudo LOC102013497 programmed cell death protein 5 pseudogene NW_004955414 20055216 20055636 - 102013497 AGCD01015354 MODEL 9039962 protein-coding LOC102019702 uncharacterized LOC102019702 NW_004955486 2317123 2335680 + 102019702 AGCD01058995;GBDF01249891;XM_005404303 XP_005404360 MODEL 8857895 ncrna LOC102020014 uncharacterized LOC102020014 NW_004955486 7288787 7290600 - 102020014 AGCD01059128;GBDF01223577;XR_263959 MODEL 9059379 protein-coding LOC102016553 phospholipase A2, membrane associated-like NW_004955452 661878 666147 - 102016553 AGCD01043822;GBDI01323160;XM_005394673;XM_013519731 XP_005394730;XP_013375185 MODEL 8784127 protein-coding LOC102005024 mucosal pentraxin-like NW_004955468 11064309 11067510 + 102005024 AGCD01052113;XM_005400166 XP_005400223 MODEL 730469573 snorna SNORD19 Small nucleolar RNA SNORD19 39133676 snorna U3 Small nucleolar RNA U3 8933062 pseudo LOC102004295 coiled-coil domain-containing protein 94 pseudogene NW_004955423 23602366 23603386 + 102004295 AGCD01024009 MODEL 39133520 snrna U4 U4 spliceosomal RNA 8872022 protein-coding Rnf215 ring finger protein 215 ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955455 4616347 4621982 - 102004896 AGCD01045681;GBBH01033943;GBDJ01274575;XM_005396567;XM_013520362 XP_005396624;XP_013375816 MODEL 10290909 protein-coding LOC106147524 translation initiation factor IF-2-like NW_004955574 1493269 1495032 + 106147524 AGCD01075183;GBDK01151612;XM_013509547 XP_013365001 MODEL 8946441 protein-coding Rpp14 ribonuclease P/MRP subunit p14 ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; FOUND IN multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog); nucleolus (ortholog) NW_004955430 1794460 1802527 - 102009971 AGCD01029135;GBDF01162002;XM_005387300;XM_005387301;XM_013515662 XP_005387357;XP_005387358;XP_013371116 MODEL 8957417 protein-coding Serinc3 serine incorporator 3 ENCODES a protein that exhibits molecular carrier activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); plasma membrane phospholipid scrambling (ortholog); positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955445 12837616 12868631 + 102018346 AGCD01039763;AGCD01039764;GBDF01003618;XM_005392472 XP_005392529 MODEL 39133344 snorna snoU89 Small nucleolar RNA U89 9025073 protein-coding Cab39 calcium binding protein 39 ENCODES a protein that exhibits kinase binding (ortholog); protein kinase activator activity (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN response to activity (ortholog); response to thyroid hormone (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog); serine/threonine protein kinase complex (ortholog) NW_004955453 4582530 4670978 - 102026711 AGCD01044692;AGCD01044693;AGCD01044694;AGCD01044695;GBDF01010077;XM_005395412;XM_005395413;XM_005395414 XP_005395469;XP_005395470;XP_005395471 MODEL 8950745 pseudo LOC102010305 protein archease pseudogene NW_004955532 1134983 1135508 + 102010305 AGCD01070166 MODEL 9042862 ncrna LOC102003269 uncharacterized LOC102003269 NW_004955515 5580629 5582659 - 102003269 AGCD01067363;AGCD01067364;GBDJ01129228;XR_264529 MODEL 8802783 pseudo LOC102005735 L-lactate dehydrogenase A-like 6B NW_004955507 6103959 6105265 - 102005735 AGCD01065696 MODEL 9043073 pseudo LOC102008345 phosducin-like protein 3 pseudogene NW_004955434 11550951 11551673 + 102008345 AGCD01032380 MODEL 8764937 protein-coding Pla2g7 phospholipase A2 group VII ENCODES a protein that exhibits 1-alkyl-2-acetylglycerophosphocholine esterase activity (ortholog); A2-type glycerophospholipase activity (ortholog); phospholipid binding (ortholog); INVOLVED IN lipid oxidation (ortholog); low-density lipoprotein particle remodeling (ortholog); phosphatidylcholine catabolic process (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog); high-density lipoprotein particle (ortholog); low-density lipoprotein particle (ortholog) NW_004955437 11534251 11577942 - 102008258 AGCD01034575;AGCD01034576;AGCD01034577;AGCD01034578;GBDJ01386258;XM_005389864;XM_005389865;XM_013517097;XM_013517098;XM_013517099 XP_005389921;XP_005389922;XP_013372551;XP_013372552;XP_013372553 MODEL 8728733 ncrna LOC102006098 uncharacterized LOC102006098 NW_004955456 14622794 14651850 - 102006098 AGCD01046645;AGCD01046646;GBDF01252370;XR_001236327;XR_001236328;XR_001236329;XR_001236330;XR_262904;XR_262905 MODEL 8966154 ncrna LOC102016554 uncharacterized LOC102016554 NW_004955404 11891642 11904435 - 102016554 AGCD01003446;AGCD01003447;XR_001234726 MODEL 730469041 snorna SNORA43 Small nucleolar RNA SNORA43 8935277 ncrna LOC102009117 uncharacterized LOC102009117 NW_004955563 897520 906409 - 102009117 AGCD01074095;GBDF01019723;XR_001232368;XR_265015 MODEL 39131917 snorna SNORA70 Small nucleolar RNA SNORA70 9002245 ncrna LOC102007578 uncharacterized LOC102007578 NW_004955430 1701824 1706200 - 102007578 AGCD01029131;AGCD01029132;GBDF01156088;XR_001234556 MODEL 8955256 protein-coding LOC102012336 guanylate-binding protein 4-like NW_004955423 4956079 4970449 + 102012336 AGCD01023550;GBDK01006373;XM_013514414;XM_013514415 XP_013369868;XP_013369869 MODEL 8882824 protein-coding Prpf39 pre-mRNA processing factor 39 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955409 16824638 16845778 - 102008194 AGCD01009744;GBDF01060020;XM_005376861;XM_005376863;XM_005376864;XM_005376865;XM_005376866;XM_013510344 XP_005376918;XP_005376920;XP_005376921;XP_005376922;XP_005376923;XP_013365798 MODEL 8911930 pseudo LOC102008757 60S acidic ribosomal protein P0 pseudogene NW_004955429 2174980 2180342 + 102008757 AGCD01028416 MODEL 8989200 protein-coding Ppp4r4 protein phosphatase 4 regulatory subunit 4 ENCODES a protein that exhibits protein phosphatase inhibitor activity (ortholog); protein serine/threonine phosphatase inhibitor activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); protein serine/threonine phosphatase complex (ortholog) NW_004955438 16237472 16332542 + 102012363 AGCD01035402;AGCD01035403;AGCD01035404;GBBH01226494;GBDI01108160;XM_005390366;XM_005390367;XM_005390368;XM_013517249 XP_005390423;XP_005390424;XP_005390425;XP_013372703 MODEL 730469299 snorna SNORA26 Small nucleolar RNA SNORA26 8804296 protein-coding Troap trophinin associated protein ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955500 8129031 8137235 + 102016493 AGCD01063981;GBDF01084874;XM_005406696;XM_005406697;XM_005406698;XM_005406699 XP_005406753;XP_005406754;XP_005406755;XP_005406756 MODEL 9028304 protein-coding Psmd8 proteasome 26S subunit, non-ATPase 8 ASSOCIATED WITH Breast Cancer, Familial (ortholog); human immunodeficiency virus infectious disease (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); synaptic vesicle (ortholog) NW_004955468 1044940 1052130 - 102016041 AGCD01051749;GBBH01033976;XM_013522469 XP_013377923 MODEL 8802108 protein-coding Ermp1 endoplasmic reticulum metallopeptidase 1 INVOLVED IN cellular response to oxidative stress (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic kidney disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955434 9772667 9825048 - 102012355 AGCD01032309;AGCD01032310;GBDF01156541;XM_013516296 XP_013371750 MODEL 8968040 protein-coding Whr1 winged helix repair factor 1 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN positive regulation of Ras protein signal transduction (ortholog); positive regulation of single strand break repair (ortholog); transcription-coupled nucleotide-excision repair (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); lymphoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955437 485110 492493 + 102006607 AGCD01034137;GBDF01043359;XM_005389405 XP_005389462 MODEL 8951451 pseudo LOC102011915 solute carrier family 35 member G1-like NW_004955549 2589395 2589895 + 102011915 AGCD01072478 MODEL 39131465 protein-coding RBAK RB associated KRAB zinc finger 8814550 pseudo LOC102018525 transcription factor BTF3 pseudogene NW_004955435 12032177 12032814 - 102018525 AGCD01033133 MODEL 626189192 snorna snoZ17 Small nucleolar RNA Z17 8856463 protein-coding Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 ENCODES a protein that exhibits identical protein binding (ortholog); lipid binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); dendrite extension (ortholog); lipid tube assembly (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH cholangiocarcinoma (ortholog); melanoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); glutamatergic synapse (ortholog) NW_004955434 20332727 20381320 + 102022955 AGCD01032615;AGCD01032616;GBCQ01093746;XM_013516394 XP_013371848 MODEL 9012331 protein-coding Slc46a2 solute carrier family 46 member 2 ENCODES a protein that exhibits cyclic-GMP-AMP transmembrane transporter activity (ortholog); INVOLVED IN cyclic-GMP-AMP transmembrane import across plasma membrane (ortholog); negative regulation of T cell apoptotic process (ortholog); positive regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway (ortholog); ASSOCIATED WITH lung cancer (ortholog); FOUND IN cell surface (ortholog); endosome membrane (ortholog); plasma membrane (ortholog) NW_004955419 14547393 14557447 + 102030424 AGCD01020028;GBDJ01084745;XM_005382700 XP_005382757 MODEL 9021191 protein-coding Tm9sf1 transmembrane 9 superfamily member 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog) NW_004955409 36208797 36214830 + 102007743 AGCD01010453;GBDF01189718;XM_005377030 XP_005377087 MODEL 39133413 snrna U4 U4 spliceosomal RNA 9038780 protein-coding Rubcn rubicon autophagy regulator ENCODES a protein that exhibits phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of autophagosome maturation (ortholog); negative regulation of autophagy (ortholog); negative regulation of endocytosis (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive spinocerebellar ataxia 15 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN early endosome (ortholog); Golgi apparatus (ortholog); late endosome (ortholog) NW_004955420 12124193 12187154 + 102029749 AGCD01020855;AGCD01020856;AGCD01020857;GBDF01120735;XM_005383093;XM_005383094;XM_005383095 XP_005383150;XP_005383151;XP_005383152 MODEL 9052553 ncrna LOC102004298 uncharacterized LOC102004298 NW_004955425 26216844 26372863 + 102004298 AGCD01025943;AGCD01025944;AGCD01025945;AGCD01025946;AGCD01025947;AGCD01025948;GBDK01344416;XR_001234297;XR_001234298 MODEL 8902247 protein-coding Lrp11 LDL receptor related protein 11 ENCODES a protein that exhibits phosphoprotein binding (ortholog); INVOLVED IN multicellular organismal response to stress (ortholog); response to cold (ortholog); response to heat (ortholog) NW_004955439 11426283 11475260 + 102006958 AGCD01035908;AGCD01035909;AGCD01035910;GBCE01007076;GBCQ01097167;XM_013517316 XP_013372770 MODEL 8740170 protein-coding Rbbp4 RB binding protein 4, chromatin remodeling factor ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); histone binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA replication-dependent chromatin assembly (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; Hedgehog signaling pathway; ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN ATPase complex (ortholog); CAF-1 complex (ortholog); chromatin (ortholog) NW_004955452 10955399 10975036 + 102025755 AGCD01044317;AGCD01044318;AGCD01044319;GBDF01043528;XM_005395079 XP_005395136 MODEL 39133522 snrna U4 U4 spliceosomal RNA 8762053 protein-coding Rer1 retention in endoplasmic reticulum sorting receptor 1 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); INVOLVED IN maintenance of protein localization in endoplasmic reticulum (ortholog); neuromuscular junction development (ortholog); positive regulation of protein localization to plasma membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955486 8791457 8802691 - 102007903 AGCD01059156;GBDJ01075964;XM_005404170;XM_005404171 XP_005404227;XP_005404228 MODEL 10197300 protein-coding LOC106147525 glioma tumor suppressor candidate region gene 1 protein-like NW_004955574 1485401 1486445 + 106147525 AGCD01075182;GBDI01012221;GBDJ01272352;XM_013509548 XP_013365002 MODEL 8963736 protein-coding Pmel premelanosome protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN eye development (ortholog); melanin biosynthetic process (ortholog); melanosome organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); coat/hair pigmentation trait (ortholog); esophageal cancer (ortholog); FOUND IN cis-Golgi network membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955458 3544855 3555453 - 102025878 AGCD01047317;AGCD01047318;AGCD01047319;GBBH01103110;XM_005397275;XM_005397277;XM_005397278 XP_005397332;XP_005397334;XP_005397335 MODEL 8732259 protein-coding Rpp21 ribonuclease P subunit p21 ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN response to xenobiotic stimulus (ortholog); tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; FOUND IN multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog) NW_004955583 467197 468564 + 102013886 AGCD01075825;GBDF01043780;XM_013509793 XP_013365247 MODEL 8836432 protein-coding Pvalb parvalbumin ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cochlea development (ortholog); excitatory chemical synaptic transmission (ortholog); gene expression (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH bipolar disorder (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN axon (ortholog); cuticular plate (ortholog); cytoplasm (ortholog) NW_004955413 23329467 23345487 - 102022484 AGCD01014329;GBCB01002123;XM_005379169 XP_005379226 MODEL 8861526 ncrna LOC102011516 uncharacterized LOC102011516 NW_004955411 10562211 10565308 + 102011516 AGCD01011781;GBDF01307096;XR_259930 MODEL 8817295 protein-coding Pidd1 p53-induced death domain protein 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive intellectual developmental disorder 75 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endopeptidase complex (ortholog) NW_004955476 11325877 11331447 + 102009941 AGCD01055449;AGCD01055450;GBDK01398145;XM_013502998 XP_013358452 MODEL 8937174 pseudo LOC102022573 centrosomal protein of 57 kDa-like NW_004955410 22742948 22744516 + 102022573 AGCD01011082 MODEL 9027486 pseudo LOC102019705 citrate synthase, mitochondrial pseudogene NW_004955489 236675 239818 - 102019705 AGCD01059787 MODEL 8997876 ncrna LOC102005026 uncharacterized LOC102005026 NW_004955414 4244433 4270227 + 102005026 AGCD01014860;GBDF01127962;XR_001233072;XR_001233073;XR_260151 MODEL 8792700 protein-coding Cab39l calcium binding protein 39 like ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955431 2781714 2899857 - 102022840 AGCD01029939;AGCD01029940;AGCD01029941;AGCD01029942;GBDJ01131213;XM_005387582;XM_005387583;XM_005387584;XM_005387585;XM_005387588;XM_005387589 XP_005387639;XP_005387640;XP_005387641;XP_005387642;XP_005387645;XP_005387646 MODEL 8752802 protein-coding Trim35 tripartite motif containing 35 INVOLVED IN antiviral innate immune response (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955403 49821150 49841634 - 102003612 AGCD01002951;GBDK01146352;XM_005373737 XP_005373794 MODEL 39133415 snrna U4 U4 spliceosomal RNA 8705295 protein-coding Rnf216 ring finger protein 216 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein catabolic process, modulating synaptic transmission (ortholog); protein K48-linked ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) NW_004955460 10423736 10578421 - 102019894 AGCD01048584;AGCD01048585;AGCD01048586;AGCD01048587;AGCD01048588;AGCD01048589;GBBH01228789;GBCB01074954;XM_013521126 XP_013376580 MODEL 8917388 pseudo LOC102006459 protein lin-7 homolog A-like NW_004955418 22883973 22884992 - 102006459 AGCD01019293 MODEL 8785232 protein-coding Rims2 regulating synaptic membrane exocytosis 2 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-containing complex binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); calcium ion-regulated exocytosis of neurotransmitter (ortholog); calcium-ion regulated exocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); CONE-ROD SYNAPTIC DISORDER SYNDROME, CONGENITAL NONPROGRESSIVE (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); inhibitory synapse (ortholog) NW_004955417 27748090 28131431 + 102021763 AGCD01018566;AGCD01018567;AGCD01018568;AGCD01018569;AGCD01018570;AGCD01018571;AGCD01018572;GBDF01158726;XM_013512858;XM_013512859;XM_013512860;XM_013512861;XM_013512862;XM_013512863 XP_013368312;XP_013368313;XP_013368314;XP_013368315;XP_013368316;XP_013368317 MODEL 8970769 protein-coding Serinc4 serine incorporator 4 NW_004955416 10255269 10257996 - 102008411 AGCD01017126;GBDF01198361;XM_013512418 XP_013367872 MODEL 9066085 protein-coding Ssuh2 ssu-2 homolog INVOLVED IN odontogenesis (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); colon adenocarcinoma (ortholog); dentin dysplasia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955561 254876 274581 - 102026579 AGCD01073819;GBDF01109495;XM_013509079 XP_013364533 MODEL 8966539 protein-coding LOC102011064 transmembrane protease serine 11D NW_004955447 4999930 5082159 + 102011064 AGCD01040736;AGCD01040737;AGCD01040738;AGCD01040739;AGCD01040740;AGCD01040741;GBDI01165135;XM_013518471 XP_013373925 MODEL 9053819 protein-coding Trpa1 transient receptor potential cation channel subfamily A member 1 ENCODES a protein that exhibits calcium channel activity (ortholog); channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transmembrane import into cytosol (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); plasma membrane (ortholog) NW_004955444 7876284 7922010 + 102027018 AGCD01038922;GBCQ01156908;XM_005392098 XP_005392155 MODEL 8883960 protein-coding LOC102013498 vomeronasal type-1 receptor 90-like NW_004955414 15078937 15087520 + 102013498 AGCD01015176;XM_005380444 XP_005380501 MODEL 8933570 pseudo LOC102010306 L-lactate dehydrogenase A chain pseudogene NW_004955437 1653118 1654576 - 102010306 AGCD01034224 MODEL 8962639 protein-coding Whrn whirlin ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); cerebellar Purkinje cell layer formation (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH asthma (ortholog); autosomal recessive nonsyndromic deafness 31 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin filament (ortholog); apical dendrite (ortholog); axon collateral (ortholog) NW_004955419 13116001 13207266 + 102010486 AGCD01019996;AGCD01019997;GBDK01284958;XM_005382629;XM_005382630;XM_005382631;XM_005382633;XM_013513190;XM_013513191 XP_005382686;XP_005382687;XP_005382688;XP_005382690;XP_013368644;XP_013368645 MODEL 39132264 snorna snoZ17 Small nucleolar RNA Z17 9043280 ncrna LOC102018526 uncharacterized LOC102018526 NW_004955527 465817 467792 + 102018526 AGCD01069385;GBDF01190302;XR_264664 MODEL 8955337 protein-coding LOC102016559 C-X-C chemokine receptor type 2 NW_004955453 15227990 15234518 - 102016559 AGCD01044890;GBBH01201214;XM_005395667 XP_005395724 MODEL 8957872 protein-coding LOC102007579 olfactory receptor 5B3-like NW_004955511 3369163 3370107 - 102007579 AGCD01066459;XM_005408264 XP_005408321 MODEL 8887073 protein-coding Tm9sf2 transmembrane 9 superfamily member 2 INVOLVED IN ceramide metabolic process (ortholog); glycosphingolipid biosynthetic process (ortholog); regulation of heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); postsynaptic Golgi apparatus (ortholog) NW_004955404 11071716 11128758 - 102011393 AGCD01003412;AGCD01003413;GBCQ01002195;XM_005374060 XP_005374117 MODEL 39131918 snorna SNORA70 Small nucleolar RNA SNORA70 8923705 protein-coding Pla2r1 phospholipase A2 receptor 1 ENCODES a protein that exhibits phospholipase binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN oxidative stress-induced premature senescence (ortholog); positive regulation of arachidonate secretion (ortholog); positive regulation of cytokine production (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955449 13542458 13653907 + 102028146 AGCD01042138;AGCD01042139;GBCE01188445;XM_005393355 XP_005393412 MODEL 8775736 protein-coding LOC102012342 uncharacterized LOC102012342 NW_004955504 2063804 2068813 - 102012342 AGCD01064853;GBDI01262175;GBDK01263929;XM_013505916 XP_013361370 MODEL 730469129 snorna SNORA26 Small nucleolar RNA SNORA26 8916024 protein-coding Psmd9 proteasome 26S subunit, non-ATPase 9 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN negative regulation of insulin secretion (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of insulin secretion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); proteasome regulatory particle, base subcomplex (ortholog) NW_004955482 6555902 6567481 - 102009946 AGCD01057403;GBCB01039020;XM_005403105 XP_005403162 MODEL 8986699 protein-coding Rbbp5 RB binding protein 5, histone lysine methyltransferase complex subunit ENCODES a protein that exhibits histone binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN DNA damage response (ortholog); gene expression (ortholog); response to estrogen (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Abdominal Pain (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN histone methyltransferase complex (ortholog); MLL1 complex (ortholog); MLL1/2 complex (ortholog) NW_004955406 40868290 40904343 - 102004894 AGCD01006667;GBDI01257066;XM_005375343;XM_005375344;XM_005375346;XM_013522894;XM_013522897 XP_005375400;XP_005375401;XP_005375403;XP_013378348;XP_013378351 MODEL 8741147 protein-coding Trim36 tripartite motif containing 36 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN acrosome reaction (ortholog); mitotic cytokinesis (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anencephaly (ortholog); Anencephaly 1 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955408 34909194 34939635 - 102021524 AGCD01008924;GBDF01006446;GBDK01026073;XM_013506978 XP_013362432 MODEL 8782395 protein-coding Ern1 endoplasmic reticulum to nucleus signaling 1 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); endonuclease activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to manganese ion (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN AIP1-IRE1 complex (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955478 7720664 7803662 + 102028189 AGCD01055988;AGCD01055989;AGCD01055990;AGCD01055991;GBBH01142310;GBDF01040833;XM_013503183 XP_013358637 MODEL 626189128 snorna SNORD2 Small nucleolar RNA SNORD2 8723231 protein-coding LOC102005737 olfactory receptor 8J3-like NW_004955511 1491665 1492606 + 102005737 AGCD01066369;XM_005407963 XP_005408020 MODEL 8705185 protein-coding Pot1 protection of telomeres 1 ENCODES a protein that exhibits 8-hydroxy-2'-deoxyguanosine DNA binding (ortholog); DEAD/H-box RNA helicase binding (ortholog); G-rich single-stranded DNA binding (ortholog); INVOLVED IN chromosome organization (ortholog); establishment of protein localization to telomere (ortholog); negative regulation of telomere maintenance via telomerase (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bone marrow disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear telomere cap complex (ortholog); nucleoplasm (ortholog) NW_004955479 6140599 6230512 - 102018183 AGCD01056377;AGCD01056378;AGCD01056379;GBDF01156854;XM_005402344;XM_005402345;XM_005402346;XM_013503293;XR_001230883 XP_005402401;XP_005402402;XP_005402403;XP_013358747 MODEL 8778371 protein-coding Spns3 SPNS lysolipid transporter 3, sphingosine-1-phosphate (putative) ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955467 12447232 12496874 - 102013403 AGCD01051636;GBDJ01304343;XM_005399690;XM_013522150;XM_013522151 XP_005399747;XP_013377604;XP_013377605 MODEL 8992249 ncrna LOC102003275 uncharacterized LOC102003275 NW_004955435 19660196 19672146 - 102003275 AGCD01033436;GBBH01155403;XR_001234913;XR_001234914;XR_001234915 MODEL 8877078 pseudo LOC102008351 39S ribosomal protein L47, mitochondrial pseudogene NW_004955438 21220270 21221541 - 102008351 AGCD01035530 MODEL 8728550 pseudo LOC102019707 translationally-controlled tumor protein pseudogene NW_004955492 4311101 4313699 + 102019707 AGCD01060715 MODEL 730469048 snorna SNORA43 Small nucleolar RNA SNORA43 8705699 pseudo LOC102005028 FACT complex subunit SSRP1 pseudogene NW_004955469 10948388 10950687 - 102005028 AGCD01052552 MODEL 8793078 ncrna LOC102008759 uncharacterized LOC102008759 NW_004955432 20992358 20999001 - 102008759 AGCD01031212;AGCD01031213;GBDF01076071;XR_261539 MODEL 8824548 protein-coding Rpp25 ribonuclease P and MRP subunit p25 ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH autistic disorder (ortholog); FOUND IN multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog); nucleoplasm (ortholog) NW_004955450 3026257 3027683 + 102005327 AGCD01042420;GBDK01320159;XM_005393527 XP_005393584 MODEL 39133523 snrna U4 U4 spliceosomal RNA 39133418 snrna U4 U4 spliceosomal RNA 8820705 protein-coding Ppp5c protein phosphatase 5 catalytic subunit ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); G-protein alpha-subunit binding (ortholog); INVOLVED IN cellular response to cadmium ion (ortholog); cellular response to hydrogen peroxide (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); dystonia (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuronal cell body (ortholog) NW_004955574 523044 545461 + 102025062 AGCD01075110;GBDI01083137;XM_005413826 XP_005413883 MODEL 10230979 ncrna LOC106147526 uncharacterized LOC106147526 NW_004955574 512990 526973 - 106147526 AGCD01075110;GBDF01111549;XR_001232450 MODEL 8827399 protein-coding LOC102020017 FERM and PDZ domain-containing protein 3-like NW_004955490 8400067 8451015 - 102020017 AGCD01060282;AGCD01060283;GBDI01247859;XM_005404701 XP_005404758 MODEL 8865643 protein-coding LOC102011918 extensin-like NW_004955559 469599 475119 + 102011918 AGCD01073586;AGCD01073587;GBDF01008163;XM_005412762;XM_005412763;XM_013508926;XR_001232336 XP_005412819;XP_005412820;XP_013364380 MODEL 8982112 protein-coding Pierce1 piercer of microtubule wall 1 INVOLVED IN axoneme assembly (ortholog); cellular response to UV-C (ortholog); cilium movement (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); sarcoma (ortholog); stomach cancer (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); cytoplasm (ortholog) NW_004955513 4047764 4055692 - 102027889 AGCD01066914;GBBH01031983;XM_005408476;XM_013506706;XR_001231745;XR_001231747;XR_001231748 XP_005408533;XP_013362160 MODEL 8935000 protein-coding Rere arginine-glutamic acid dipeptide repeats ENCODES a protein that exhibits transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN branching morphogenesis of a nerve (ortholog); cerebellar granule cell precursor proliferation (ortholog); cerebellar Purkinje cell layer maturation (ortholog); ASSOCIATED WITH atrial heart septal defect (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN histone deacetylase complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955486 4303573 4695800 + 102026871 AGCD01059057;AGCD01059058;AGCD01059059;AGCD01059060;AGCD01059061;AGCD01059062;AGCD01059063;GBBH01091311;GBDF01085949;XM_013504212 XP_013359666 MODEL 8856621 protein-coding Pmepa1 prostate transmembrane protein, androgen induced 1 ENCODES a protein that exhibits protein sequestering activity (ortholog); R-SMAD binding (ortholog); WW domain binding (ortholog); INVOLVED IN negative regulation of SMAD protein signal transduction (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN early endosome membrane (ortholog); endosome membrane (ortholog); Golgi membrane (ortholog) NW_004955445 1837084 1847214 + 102030250 AGCD01039346;GBCE01055931;XM_005392247 XP_005392304 MODEL 8879541 protein-coding Pvrig PVR related immunoglobulin domain containing ENCODES a protein that exhibits phosphatase binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN negative regulation of T cell receptor signaling pathway (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955573 592438 595056 - 102011063 AGCD01074994;GBDK01306774;XM_013509498;XM_013509499;XM_013509500;XM_013509501;XM_013509502 XP_013364952;XP_013364953;XP_013364954;XP_013364955;XP_013364956 MODEL 8886449 protein-coding LOC102011519 zinc finger protein with KRAB and SCAN domains 3 NW_004955465 13688307 13696499 + 102011519 AGCD01050618;GBCB01076570;XM_005398966 XP_005399023 MODEL 8728965 pseudo LOC102010310 eukaryotic translation initiation factor 3 subunit F-like NW_004955441 1151626 1157056 - 102010310 AGCD01036747 MODEL 8833996 protein-coding Sox9 SRY-box transcription factor 9 ENCODES a protein that exhibits beta-catenin binding (ortholog); bHLH transcription factor binding (ortholog); chromatin binding (ortholog); INVOLVED IN anterior head development (ortholog); aortic valve morphogenesis (ortholog); astrocyte fate commitment (ortholog); ASSOCIATED WITH 46,XX sex reversal 2 (ortholog); 46,XY sex reversal 10 (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955478 941684 945563 - 102020005 AGCD01055751;GBDJ01031941;XM_005402098 XP_005402155 MODEL 8755936 protein-coding Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of clathrin-dependent endocytosis (ortholog); positive regulation of neuron differentiation (ortholog); regulation of clathrin-dependent endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); early endosome (ortholog) NW_004955416 13151288 13297878 - 102030075 AGCD01017219;AGCD01017220;AGCD01017221;GBDF01002482;XM_005381462;XM_013512668;XM_013512669;XM_013512670 XP_005381519;XP_013368122;XP_013368123;XP_013368124 MODEL 8766255 protein-coding Slc46a3 solute carrier family 46 member 3 ENCODES a protein that exhibits copper ion transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN cellular response to 2,3,7,8-tetrachlorodibenzodioxine (ortholog); vacuolar transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955497 8015244 8034195 - 102007674 AGCD01062692;GBCE01134273;XM_005406361;XM_005406362;XR_264212 XP_005406418;XP_005406419 MODEL 39133596 snorna snoZ196 Small nucleolar RNA Z196/R39/R59 family 8738170 protein-coding Cabcoco1 ciliary associated calcium binding coiled-coil 1 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN sperm flagellum assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); sperm flagellum (ortholog) NW_004955425 15007833 15115084 + 102018510 AGCD01025574;GBDF01089420;XM_005385945 XP_005386002 MODEL 8893510 protein-coding LOC102004305 olfactory receptor 9I1-like NW_004955511 3072937 3073479 + 102004305 AGCD01066440;XM_013506379 XP_013361833 MODEL 8728890 protein-coding LOC102009120 leukocyte-associated immunoglobulin-like receptor 1 NW_004955567 1481960 1491331 - 102009120 AGCD01074476;GBBH01229034;XM_013509284;XM_013509285;XM_013509286;XM_013509287;XM_013509288 XP_013364738;XP_013364739;XP_013364740;XP_013364741;XP_013364742 MODEL 8855260 pseudo LOC102007580 protein kinase C iota type pseudogene NW_004955430 14241459 14243053 - 102007580 AGCD01029564 MODEL 10092336 protein-coding Lrp12 LDL receptor related protein 12 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell migration (ortholog); integrin activation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 28 (ortholog); breast cancer (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955417 28248620 28299845 - 106148202 AGCD01018576;AGCD01018577;AGCD01018578;GBBH01207935;GBDK01395295;XM_013512743 XP_013368197 MODEL 9025758 protein-coding Rubcnl rubicon like autophagy enhancer ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagosome-endosome fusion (ortholog); autophagosome-lysosome fusion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN autophagosome membrane (ortholog) NW_004955431 140999 206570 - 102010828 AGCD01029856;AGCD01029857;AGCD01029858;AGCD01029859;GBDJ01387854;XM_005387542;XM_005387544;XM_005387545;XM_013515872;XM_013515873;XM_013515874;XM_013515875 XP_005387599;XP_005387601;XP_005387602;XP_013371326;XP_013371327;XP_013371328;XP_013371329 MODEL 8987986 protein-coding Rnf217 ring finger protein 217 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); multiple sclerosis (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955436 6458088 6566112 + 102027336 AGCD01033688;AGCD01033689;GBCE01013462;GBDF01306838;XM_013516659 XP_013372113 MODEL 8724526 protein-coding Rims3 regulating synaptic membrane exocytosis 3 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); regulation of membrane potential (ortholog); regulation of synapse organization (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); thymoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic cytosol (ortholog) NW_004955537 483717 522053 - 102003802 AGCD01070866;GBDF01220201;XM_005410577;XM_005410578;XM_005410579 XP_005410634;XP_005410635;XP_005410636 MODEL 8752080 protein-coding Ssx2ip SSX family member 2 interacting protein ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN centrosome cycle (ortholog); cilium assembly (ortholog); intraciliary transport involved in cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN adherens junction (ortholog); cell leading edge (ortholog); centriolar satellite (ortholog) NW_004955423 9249528 9296293 + 102028768 AGCD01023657;GBDF01001292;XM_005385153;XM_005385155;XR_260961 XP_005385210;XP_005385212 MODEL 8758854 protein-coding Psme1 proteasome activator subunit 1 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); INVOLVED IN antigen processing and presentation of exogenous antigen (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); carcinoma (ortholog); FOUND IN proteasome complex (ortholog) NW_004955409 36262114 36264996 - 102008384 AGCD01010454;GBCB01003421;XM_005377033;XM_013510409 XP_005377090;XP_013365863 MODEL 8759302 pseudo LOC102022574 eukaryotic translation initiation factor 4B pseudogene NW_004955464 1895737 1897508 + 102022574 AGCD01049957;XR_263224 MODEL 8740452 pseudo LOC102013499 superoxide dismutase [Cu-Zn] pseudogene NW_004955472 2854745 2855177 + 102013499 AGCD01053492 MODEL 8757838 protein-coding Rbbp6 RB binding protein 6, ubiquitin ligase ENCODES a protein that exhibits protein kinase binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); embryonic organ development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN centrosome (ortholog); nuclear speck (ortholog); protein-containing complex (ortholog) NW_004955493 3003522 3034638 + 102025257 AGCD01060977;AGCD01060978;GBBH01164809;GBDI01083427;XM_005405106 XP_005405163 MODEL 8911879 protein-coding LOC102006100 TIR domain-containing adapter molecule 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); negative regulation of chemokine (C-C motif) ligand 5 production (ortholog); negative regulation of toll-like receptor 4 signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; FOUND IN cytoplasm (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955408 35342733 35382821 - 102006100 AGCD01008938;AGCD01008939;GBBH01033904;GBDK01342442;XM_005376595 XP_005376652 MODEL 39132694 snorna SNORD20 Small nucleolar RNA SNORD20 8847509 protein-coding Trim37 tripartite motif containing 37 ENCODES a protein that exhibits chromatin binding (ortholog); histone H2AK119 ubiquitin ligase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN aggresome assembly (ortholog); negative regulation of centriole replication (ortholog); negative regulation of gene expression, epigenetic (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN aggresome (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955451 3839757 4014178 + 102019228 AGCD01043075;AGCD01043076;AGCD01043077;AGCD01043078;AGCD01043079;AGCD01043080;AGCD01043081;AGCD01043082;AGCD01043083;AGCD01043084;AGCD01043085;AGCD01043086;AGCD01043087;XM_005393999;XM_013519212;XM_013519214;XM_013519215;XM_013519216;XM_013519217;XM_013519218;XM_013519219;XM_013519220;XM_013519221 XP_005394056;XP_013374666;XP_013374668;XP_013374669;XP_013374670;XP_013374671;XP_013374672;XP_013374673;XP_013374674;XP_013374675 MODEL 9045238 protein-coding Trpc1 transient receptor potential cation channel subfamily C member 1 ENCODES a protein that exhibits ATPase binding (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); cellular response to hypoxia (ortholog); melanin biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); cervical cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); cation channel complex (ortholog); costamere (ortholog) NW_004955508 3143868 3211613 - 102013194 AGCD01065805;GBCE01163015;GBDF01158759;XM_005407739 XP_005407796 MODEL 8745459 protein-coding LOC102005739 olfactory receptor 5L1-like NW_004955511 649905 655429 + 102005739 AGCD01066337;XM_013506360 XP_013361814 MODEL 8804781 ncrna LOC102003276 uncharacterized LOC102003276 NW_004955528 1806550 1808282 + 102003276 AGCD01069571;AGCD01069572;XR_001231991 MODEL 8937104 protein-coding LOC102018529 putative olfactory receptor 2B3 NW_004955537 2603825 2604915 - 102018529 AGCD01070933;GBDF01030354;XM_005410626 XP_005410683 MODEL 730469094 snorna SNORA43 Small nucleolar RNA SNORA43 39131919 snorna SNORA70 Small nucleolar RNA SNORA70 8793966 pseudo LOC102008760 ATP-dependent RNA helicase DDX50-like NW_004955519 1840874 1843190 - 102008760 AGCD01067909 MODEL 8733095 protein-coding LOC102016560 uncharacterized LOC102016560 NW_004955454 508411 513395 + 102016560 AGCD01044959;GBDF01010964;XM_005395726;XM_013520085 XP_005395783;XP_013375539 MODEL 8783453 pseudo LOC102006463 targeting protein for Xklp2 pseudogene NW_004955484 7904220 7935632 - 102006463 AGCD01058355;AGCD01058356;AGCD01058357;AGCD01058358;AGCD01058359 MODEL 8985118 protein-coding Plaa phospholipase A2 activating protein ENCODES a protein that exhibits phospholipase A2 activator activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); inflammatory response (ortholog); macroautophagy (ortholog); ASSOCIATED WITH B-cell lymphoma (ortholog); bicuspid aortic valve disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN ATPase complex (ortholog); cytoplasm (ortholog); cytoplasmic ubiquitin ligase complex (ortholog) NW_004955472 7879196 7915040 + 102027635 AGCD01053633;AGCD01053634;AGCD01053635;GBCE01084855;XM_005401157 XP_005401214 MODEL 39133524 snrna U4 U4 spliceosomal RNA 8755540 pseudo LOC102011065 60S ribosomal protein L4-like NW_004955447 17826623 17831419 + 102011065 AGCD01041137 MODEL 9029822 protein-coding Wif1 WNT inhibitory factor 1 INVOLVED IN positive regulation of fat cell differentiation (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH breast cancer (ortholog); Colorectal Neoplasms (ortholog); Endometrioid Carcinomas (ortholog) NW_004955458 11755147 11834047 - 102009152 AGCD01047759;AGCD01047760;GBBH01163275;GBCE01002151;XM_013521009 XP_013376463 MODEL 9062900 pseudo LOC102008354 pre-mRNA-processing factor 17-like NW_004955441 193642 199372 - 102008354 AGCD01036688 MODEL 9004959 protein-coding Tm9sf3 transmembrane 9 superfamily member 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955507 2726402 2789377 - 102018955 AGCD01065592;AGCD01065593;GBBH01060617;GBCE01055359;XM_013506165 XP_013361619 MODEL 8769604 protein-coding Psme2 proteasome activator subunit 2 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN antigen processing and presentation of exogenous antigen (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN proteasome complex (ortholog) NW_004955409 36252847 36257021 + 102009919 AGCD01010454;GBDF01048370;XM_005377038 XP_005377095 MODEL 616940621 snorna snoZ30 Z30 small nucleolar RNA 9060348 protein-coding Rpp25l ribonuclease P/MRP subunit p25 like ASSOCIATED WITH ovarian cancer (ortholog) NW_004955472 1521651 1522599 + 102023582 AGCD01053399;GBBH01031862;XM_005401055 XP_005401112 MODEL 8862910 ncrna LOC102004307 uncharacterized LOC102004307 NW_004955431 5084453 5109317 - 102004307 AGCD01030014;AGCD01030015;GBDF01050896;XR_001234597;XR_261453;XR_261454;XR_261455 MODEL 8930493 protein-coding LOC102005029 olfactory receptor 51I2-like NW_004955414 21361256 21362200 - 102005029 AGCD01015416;XM_005380085 XP_005380142 MODEL 8933989 protein-coding Serinc5 serine incorporator 5 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); molecular carrier activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); myelination (ortholog); phosphatidylserine metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); myelin sheath (ortholog) NW_004955418 29502562 29573966 + 102006460 AGCD01019468;AGCD01019469;AGCD01019470;GBBH01115821;GBCB01111527;XM_013513014 XP_013368468 MODEL 730469565 snorna SNORA26 Small nucleolar RNA SNORA26 8799819 pseudo LOC102007581 glutamate dehydrogenase 1, mitochondrial-like NW_004955433 562648 564548 - 102007581 AGCD01031327 MODEL 8964272 ncrna LOC102020018 uncharacterized LOC102020018 NW_004955491 9008190 9011535 + 102020018 AGCD01060622;GBDF01089337;XR_001231209 MODEL 8897290 protein-coding Ppp6c protein phosphatase 6 catalytic subunit ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of cGAS/STING signaling pathway (ortholog); protein dephosphorylation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955419 3096882 3133590 + 102015845 AGCD01019705;AGCD01019706;AGCD01019707;GBDF01005066;XM_005382467;XM_005382468 XP_005382524;XP_005382525 MODEL 8717278 pseudo LOC102011922 protein kinase C iota type pseudogene NW_004955446 1525926 1528371 + 102011922 AGCD01039967;XM_005392599 MODEL 8750770 protein-coding Prpf4 pre-mRNA splicing tri-snRNP complex factor PRPF4 INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN Cajal body (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955419 14190146 14206086 - 102025798 AGCD01020013;GBDF01190621;XM_005382685 XP_005382742 MODEL 8783454 pseudo LOC102006467 thyroid transcription factor 1-associated protein 26-like NW_004955488 4546212 4563715 + 102006467 AGCD01059598 MODEL 8758286 protein-coding Ern2 endoplasmic reticulum to nucleus signaling 2 ENCODES a protein that exhibits ATP binding (ortholog); endonuclease activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) NW_004955493 2217187 2233920 - 102014683 AGCD01060935;GBBH01165480;GBBH01165568;XM_013504864 XP_013360318 MODEL 8712895 protein-coding Pmfbp1 polyamine modulated factor 1 binding protein 1 INVOLVED IN gene expression (ortholog); intracellular protein localization (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); sperm flagellum (ortholog); sperm head (ortholog) NW_004955484 4776358 4822312 - 102018933 AGCD01058232;GBDF01043820;XM_005403532;XM_013503846;XM_013503847 XP_005403589;XP_013359300;XP_013359301 MODEL 8865312 protein-coding Pou1f1 POU class 1 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adenohypophysis development (ortholog); B cell differentiation (ortholog); cell fate specification (ortholog); ASSOCIATED WITH breast carcinoma (ortholog); combined or isolated pituitary hormone deficiency 1 (ortholog); combined pituitary hormone deficiency (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955407 5996016 6011483 + 102025654 AGCD01006940;GBDI01038943;XM_005375536 XP_005375593 MODEL 730469262 misc_rna PVT1_1 Pvt1 onco conserved region 1 9033392 pseudo LOC102022575 phosphoglycerate mutase 1-like NW_004955411 32207891 32260701 + 102022575 AGCD01012294;AGCD01012295;AGCD01012296;AGCD01012297;AGCD01012298 MODEL 8947406 protein-coding Spo11 SPO11 initiator of meiotic double strand breaks ENCODES a protein that exhibits DNA endonuclease activity (ortholog); INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); homologous chromosome pairing at meiosis (ortholog); male meiosis I (ortholog); ASSOCIATED WITH cervical cancer (ortholog); spermatogenic failure 3 (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (ortholog) NW_004955445 2088144 2103385 - 102005521 AGCD01039350;GBDF01277074;XM_005392256;XM_005392257;XM_005392258;XM_005392259;XM_013518307;XM_013518308 XP_005392313;XP_005392314;XP_005392315;XP_005392316;XP_013373761;XP_013373762 MODEL 8726228 ncrna LOC102013501 uncharacterized LOC102013501 NW_004955473 5281173 5291335 + 102013501 AGCD01053974;GBDI01312184;XR_001237117;XR_263581 MODEL 39132826 snorna SNORD21 Small nucleolar RNA SNORD21 9066467 protein-coding Rerg RAS like estrogen regulated growth inhibitor ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of cell population proliferation (ortholog); response to hormone (ortholog); ASSOCIATED WITH breast cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955413 11825235 11940390 - 102004687 AGCD01013973;AGCD01013974;AGCD01013975;AGCD01013976;GBCQ01095141;XM_005379016;XM_013511678 XP_005379073;XP_013367132 MODEL 9015116 protein-coding Rbbp7 RB binding protein 7, chromatin remodeling factor ENCODES a protein that exhibits histone binding (ortholog); RNA binding (ortholog); INVOLVED IN cellular heat acclimation (ortholog); chromatin remodeling (ortholog); negative regulation of cell growth (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; Hedgehog signaling pathway; ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN ATPase complex (ortholog); chromosome, telomeric region (ortholog); ESC/E(Z) complex (ortholog) NW_004955519 1460199 1482699 + 102006943 AGCD01067893;GBDF01080619;XM_005409144 XP_005409201 MODEL 8837894 protein-coding Trim40 tripartite motif containing 40 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of protein catabolic process (ortholog); negative regulation of protein localization to nucleus (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); irritant dermatitis (ortholog); FOUND IN IkappaB kinase complex (ortholog) NW_004955583 242054 260565 + 102029573 AGCD01075807;AGCD01075808;GBDF01180385;XM_005414342 XP_005414399 MODEL 8935612 ncrna LOC102005742 uncharacterized LOC102005742 NW_004955432 18897605 18899874 + 102005742 AGCD01031161;GBDF01006386;XR_261534 MODEL 8713381 ncrna LOC102012343 uncharacterized LOC102012343 NW_004955427 8525675 8532142 - 102012343 AGCD01027075;GBDF01226078;XR_261241 MODEL 8854816 protein-coding Sp1 Sp1 transcription factor ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); cellular response to insulin stimulus (ortholog); cellular response to wortmannin (ortholog); PARTICIPATES IN forkhead class A signaling pathway; hypoxia inducible factor pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Carotid Artery Injuries (ortholog); Colorectal Neoplasms (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); nucleoplasm (ortholog) NW_004955458 644435 677360 + 102020425 AGCD01047144;AGCD01047145;AGCD01047146;AGCD01047147;GBCE01004928;XM_005397176;XM_013520955;XM_013520956 XP_005397233;XP_013376409;XP_013376410 MODEL 39133422 snrna U4 U4 spliceosomal RNA 8866276 protein-coding Cabin1 calcineurin binding protein 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein phosphatase 2B binding (ortholog); INVOLVED IN DNA replication-dependent chromatin assembly (ortholog); negative regulation of apoptotic process (ortholog); response to activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); FOUND IN HIR complex (ortholog); nucleoplasm (ortholog) NW_004955455 8162365 8312932 - 102007854 AGCD01045881;AGCD01045882;AGCD01045883;AGCD01045884;AGCD01045885;AGCD01045886;GBBH01092386;XM_013520395;XM_013520396;XM_013520398;XM_013520399;XM_013520400;XM_013520401 XP_013375849;XP_013375850;XP_013375852;XP_013375853;XP_013375854;XP_013375855 MODEL 8786200 protein-coding LOC102009121 zinc finger protein 345-like NW_004955569 1713912 1862497 + 102009121 AGCD01074678;AGCD01074679;AGCD01074680;AGCD01074681;AGCD01074682;AGCD01074683;AGCD01074684;AGCD01074685;AGCD01074686;AGCD01074687;AGCD01074688;AGCD01074689;AGCD01074690;AGCD01074691;AGCD01074692;XM_013509366 XP_013364820 MODEL 8784459 protein-coding Lrp1b LDL receptor related protein 1B ENCODES a protein that exhibits low-density lipoprotein particle receptor activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN membrane (ortholog); signaling receptor complex (ortholog) NW_004955440 7048527 8475566 - 102017063 AGCD01036325;AGCD01036326;AGCD01036327;AGCD01036328;AGCD01036329;AGCD01036330;AGCD01036331;AGCD01036332;AGCD01036333;AGCD01036334;AGCD01036335;AGCD01036336;AGCD01036337;AGCD01036338;AGCD01036339;AGCD01036340;AGCD01036341;AGCD01036342;AGCD01036343;AGCD01036344;AGCD01036345;AGCD01036346;AGCD01036347;AGCD01036348;AGCD01036349;AGCD01036350;AGCD01036351;AGCD01036352;AGCD01036353;AGCD01036354;AGCD01036355;AGCD01036356;AGCD01036357;GBDF01182714;XM_013517439 XP_013372893 MODEL 9054203 ncrna LOC102008766 uncharacterized LOC102008766 NW_004955435 5849029 5853706 - 102008766 AGCD01032901;AGCD01032902;GBDF01188936;XR_261666 MODEL 10309701 protein-coding LOC106147528 dapper homolog 3-like NW_004955574 707908 708987 - 106147528 AGCD01075124;GBDF01189353;GBDK01285168;XM_013509564 XP_013365018 MODEL 8825329 protein-coding Rufy1 RUN and FYVE domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); SH2 domain binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); endosomal vesicle fusion (ortholog); protein transport (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome membrane (ortholog) NW_004955408 946842 991717 - 102005110 AGCD01007944;AGCD01007945;GBCQ01003838;GBDJ01073789;XM_013507916 XP_013363370 MODEL 8909584 pseudo LOC102011069 multifunctional protein ADE2 pseudogene NW_004955402 52895248 52897277 + 102011069 AGCD01001350 MODEL 8940274 protein-coding Rnf220 ring finger protein 220 ENCODES a protein that exhibits beta-catenin binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN dorsal/ventral neural tube patterning (ortholog); gene expression (ortholog); noradrenergic neuron development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); nuclear lamina (ortholog) NW_004955464 13579828 13795266 - 102014992 AGCD01050290;AGCD01050291;AGCD01050292;AGCD01050293;GBCQ01039905;XM_013521648;XM_013521649;XM_013521650;XM_013521651;XM_013521652;XM_013521653;XM_013521654;XM_013521655 XP_013377102;XP_013377103;XP_013377104;XP_013377105;XP_013377106;XP_013377107;XP_013377108;XP_013377109 MODEL 8840846 protein-coding Rims4 regulating synaptic membrane exocytosis 4 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN regulation of membrane potential (ortholog); regulation of synapse organization (ortholog); regulation of synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); synapse (ortholog); synaptic membrane (ortholog) NW_004955445 12542824 12604355 + 102015787 AGCD01039758;AGCD01039759;GBDF01102651;XM_005392463 XP_005392520 MODEL 8911148 pseudo LOC102006101 serine incorporator 3-like NW_004955459 2481300 2493364 - 102006101 AGCD01047991 MODEL 8943019 protein-coding Trpc3 transient receptor potential cation channel subfamily C member 3 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium-activated cation channel activity (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); positive regulation of calcium ion transport into cytosol (ortholog); positive regulation of cardiac muscle hypertrophy in response to stress (ortholog); ASSOCIATED WITH Albuminuria (ortholog); bipolar disorder (ortholog); cerebellar ataxia type 41 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955428 18628951 18678525 + 102017360 AGCD01028069;GBCB01100950;XM_005386779;XM_013515247 XP_005386836;XP_013370701 MODEL 8761737 protein-coding Slc48a1 solute carrier family 48 member 1 ENCODES a protein that exhibits heme binding (ortholog); heme transmembrane transporter activity (ortholog); INVOLVED IN heme export (ortholog); heme export from vacuole to cytoplasm (ortholog); heme metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endolysosome (ortholog); endosome membrane (ortholog) NW_004955500 6675631 6691942 + 102020028 AGCD01063890;AGCD01063891;GBBH01089082;XM_005406620;XM_005406621;XM_005406622 XP_005406677;XP_005406678;XP_005406679 MODEL 8720369 ncrna LOC102003284 uncharacterized LOC102003284 NW_004955438 10342037 10345901 + 102003284 AGCD01035203;GBDF01305498;XR_261924 MODEL 730468937 snorna SNORA43 Small nucleolar RNA SNORA43 39132915 snorna SNORD21 Small nucleolar RNA SNORD21 39131920 snorna SNORA70 Small nucleolar RNA SNORA70 8830742 pseudo LOC102016561 alpha- and gamma-adaptin-binding protein p34 pseudogene NW_004955455 9962053 9963132 + 102016561 AGCD01045933 MODEL 9053322 protein-coding Trim41 tripartite motif containing 41 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to muramyl dipeptide (ortholog); defense response to virus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) NW_004955530 84683 95835 - 102004002 AGCD01069830;GBCB01060416;XM_005410099 XP_005410156 MODEL 9026843 protein-coding Plaat1 phospholipase A and acyltransferase 1 ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); glycerophospholipase activity (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); N-acylphosphatidylethanolamine metabolic process (ortholog); peroxisome organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear envelope lumen (ortholog); nucleus (ortholog) NW_004955420 15305901 15326444 - 102008629 AGCD01020968;GBBH01131778;XM_005383210;XM_005383211 XP_005383267;XP_005383268 MODEL 8898445 protein-coding Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 ENCODES a protein that exhibits fatty acid binding (ortholog); identical protein binding (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); INVOLVED IN 'de novo' post-translational protein folding (ortholog); autophagic cell death (ortholog); cellular response to amino acid starvation (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN autophagosome membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955423 7393186 7414199 - 102020135 AGCD01023599;GBCB01019971;GBDF01006186;XM_013514504;XM_013514505;XM_013514506;XM_013514507 XP_013369958;XP_013369959;XP_013369960;XP_013369961 MODEL 8791005 protein-coding LOC102005030 olfactory receptor 226 ENCODES a protein that exhibits G protein-coupled olfactory receptor activity (ortholog); G protein-coupled receptor activity (ortholog); olfactory receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); detection of chemical stimulus involved in sensory perception of smell (ortholog); positive regulation of NLRP3 inflammasome complex assembly (ortholog); FOUND IN plasma membrane (ortholog) NW_004955414 22706291 22707274 - 102005030 AGCD01015472;XM_005380180 XP_005380237 MODEL 8915768 protein-coding Serp1 stress associated endoplasmic reticulum protein 1 INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); glucose metabolic process (ortholog); muscle organ morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic microtubule (ortholog) NW_004955448 1738242 1742807 - 102024738 AGCD01041266;AGCD01041267;GBCB01088573;GBDF01046142;XM_005393009 XP_005393066 MODEL 9021443 protein-coding LOC102019709 uncharacterized LOC102019709 NW_004955422 29357621 29359088 - 102019709 AGCD01023392;GBBH01220834;XM_005384906;XM_013513878;XM_013513879 XP_005384963;XP_013369332;XP_013369333 MODEL 8796740 pseudo LOC102010312 transcription and mRNA export factor ENY2 pseudogene NW_004955553 1476433 1476725 - 102010312 AGCD01072886 MODEL 9041056 protein-coding LOC102011531 vomeronasal type-1 receptor 90-like NW_004955414 14947178 14948107 - 102011531 AGCD01015163;XM_005380439 XP_005380496 MODEL 9036522 protein-coding Lrp2 LDL receptor related protein 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); calcium ion binding (ortholog); cargo receptor activity (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); animal organ regeneration (ortholog); aorta development (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); acute kidney failure (ortholog); acute myeloid leukemia (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); axon (ortholog) NW_004955449 5155109 5314886 + 102030138 AGCD01041922;AGCD01041923;AGCD01041924;AGCD01041925;AGCD01041926;GBCQ01000856;XM_013518692 XP_013374146 MODEL 9025217 protein-coding Ero1a endoplasmic reticulum oxidoreductase 1 alpha ENCODES a protein that exhibits flavin-dependent sulfhydryl oxidase activity (ortholog); oxidoreductase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cell redox homeostasis (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Hypoxia-Ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN dendrite (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955409 10495892 10533383 + 102009917 AGCD01009474;AGCD01009475;GBCE01145796;XM_005376780 XP_005376837 MODEL 8921463 protein-coding Wipf1 WAS/WASL interacting protein family member 1 ENCODES a protein that exhibits cytoskeletal adaptor activity (ortholog); protein folding chaperone (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament-based movement (ortholog); positive regulation of protein export from nucleus (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog) NW_004955449 760382 831007 + 102021190 AGCD01041772;AGCD01041773;AGCD01041774;GBBH01142069;GBDF01014452;XM_013518745 XP_013374199 MODEL 8712595 pseudo LOC102008356 kinetochore-associated protein DSN1 homolog pseudogene NW_004955444 350531 351610 - 102008356 AGCD01038664;XM_005392056 MODEL 8731100 pseudo LOC102018531 thioredoxin pseudogene NW_004955547 1523626 1523939 + 102018531 AGCD01072227 MODEL 9065668 pseudo LOC102012344 protein AMN1 homolog pseudogene NW_004955505 4070700 4071337 + 102012344 AGCD01065083;XR_264308 MODEL 9016001 pseudo LOC102004309 ESF1 homolog NW_004955432 19133089 19170480 - 102004309 AGCD01031169 MODEL 39133525 snrna U4 U4 spliceosomal RNA 8750242 ncrna LOC102007586 uncharacterized LOC102007586 NW_004955435 13055123 13064175 + 102007586 AGCD01033177;GBBH01079921;XR_261684 MODEL 8775721 protein-coding Rpp30 ribonuclease P/MRP subunit p30 ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog); ribonuclease MRP complex (ortholog) NW_004955425 2276006 2302882 - 102012340 AGCD01025257;GBCE01187974;XM_005385840 XP_005385897 MODEL 10205715 ncrna LOC106147530 uncharacterized LOC106147530 NW_004955574 416191 421964 - 106147530 AGCD01075104;AGCD01075105;GBDF01270534;XR_001232451 MODEL 8766378 protein-coding St13 ST13 Hsp70 interacting protein ENCODES a protein that exhibits dATP binding (ortholog); Hsp70 protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of protein refolding (ortholog); positive regulation of protein folding (ortholog); response to bacterium (ortholog); PARTICIPATES IN androgen signaling pathway; chaperone mediated autophagy pathway; ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog) NW_004955413 26478579 26507671 - 102014548 AGCD01014445;AGCD01014446;GBCB01001147;XM_005379336 XP_005379393 MODEL 8829544 protein-coding Ppp6r1 protein phosphatase 6 regulatory subunit 1 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); small GTPase binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog) NW_004955567 966483 985692 + 102030486 AGCD01074450;GBCQ01065625;XM_013509240;XM_013509241;XM_013509242 XP_013364694;XP_013364695;XP_013364696 MODEL 8889622 pseudo LOC102006469 signal recognition particle 14 kDa protein-like NW_004955492 7321458 7321798 + 102006469 AGCD01060786 MODEL 730469544 misc_rna PVT1_1 Pvt1 onco conserved region 1 8799261 protein-coding Rnf222 ring finger protein 222 ASSOCIATED WITH acute myeloid leukemia (ortholog) NW_004955467 8505014 8511750 + 102017435 AGCD01051452;XM_005399410;XM_013522027 XP_005399467;XP_013377481 MODEL 8887386 protein-coding Spocd1 SPOC domain containing 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN gene silencing by piRNA-directed DNA methylation (ortholog); spermatogenesis (ortholog); transposable element silencing by piRNA-mediated DNA methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); melanoma (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog) NW_004955452 10192076 10214914 - 102020976 AGCD01044270;AGCD01044271;GBDF01184512;XM_013519461 XP_013374915 MODEL 8927963 ncrna LOC102010314 uncharacterized LOC102010314 NW_004955555 108802 119271 + 102010314 AGCD01073024;GBBH01226678;XR_264947;XR_264948 MODEL 8811243 protein-coding Tm9sf4 transmembrane 9 superfamily member 4 ENCODES a protein that exhibits cargo receptor activity (ortholog); INVOLVED IN cell adhesion (ortholog); Golgi to plasma membrane transport (ortholog); phagocytosis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN early endosome (ortholog); Golgi apparatus (ortholog) NW_004955422 28871977 28929246 - 102011329 AGCD01023373;AGCD01023374;GBDF01048625;XM_005384878;XM_013514057 XP_005384935;XP_013369511 MODEL 8893791 protein-coding LOC102013509 uncharacterized LOC102013509 NW_004955485 6368092 6370491 + 102013509 AGCD01058616;XM_005403920 XP_005403977 MODEL 730469140 snorna snoZ39 Small nucleolar RNA Z39 8968450 protein-coding Psme3 proteasome activator subunit 3 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); identical protein binding (ortholog); MDM2/MDM4 family protein binding (ortholog); INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955451 16631379 16637331 + 102023658 AGCD01043696;AGCD01043697;GBDF01008333;XM_005394477;XM_005394479 XP_005394534;XP_005394536 MODEL 8741319 protein-coding Rbbp8 RB binding protein 8, endonuclease ENCODES a protein that exhibits damaged DNA binding (ortholog); identical protein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); DNA double-strand break processing involved in repair via single-strand annealing (ortholog); DNA strand resection involved in replication fork processing (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; homologous recombination pathway of double-strand break repair; non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN BRCA1-C complex (ortholog); chromosome (ortholog); nucleoplasm (ortholog) NW_004955402 11245857 11331872 + 102030137 AGCD01000298;AGCD01000299;GBDK01233448;XM_005372692;XM_005372693;XM_005372694;XM_013503320 XP_005372749;XP_005372750;XP_005372751;XP_013358774 MODEL 39133424 snrna U4 U4 spliceosomal RNA 730468963 snorna SNORA26 Small nucleolar RNA SNORA26 9050633 pseudo LOC102020019 uncharacterized protein C12orf45 pseudogene NW_004955492 4532302 4532876 + 102020019 AGCD01060724 MODEL 8806893 protein-coding Cables1 Cdk5 and Abl enzyme substrate 1 INVOLVED IN nervous system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Colorectal Neoplasms (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955402 11415913 11514132 + 102019553 AGCD01000300;AGCD01000301;GBCE01064555;GBCQ01094084;XM_013503852 XP_013359306 MODEL 8940113 pseudo LOC102008769 E3 ubiquitin-protein ligase XIAP pseudogene NW_004955536 609566 611847 + 102008769 AGCD01070732 MODEL 8794673 protein-coding LOC102011927 uncharacterized LOC102011927 NW_004955450 3259515 3262466 + 102011927 AGCD01042426;GBDF01042694;XM_005393550 XP_005393607 MODEL 8785931 protein-coding Pml PML nuclear body scaffold ENCODES a protein that exhibits cobalt ion binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); apoptotic process (ortholog); branching involved in mammary gland duct morphogenesis (ortholog); PARTICIPATES IN mTOR signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 3654854 3692057 - 102020735 AGCD01042439;AGCD01042440;AGCD01042441;GBDJ01009152;XM_013518918;XM_013518919;XM_013518920;XM_013518921;XR_001235868 XP_013374372;XP_013374373;XP_013374374;XP_013374375 MODEL 8857153 protein-coding Pierce2 piercer of microtubule wall 2 INVOLVED IN axoneme assembly (ortholog); cilium movement (ortholog); determination of left/right symmetry (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) NW_004955409 523414 530630 - 102020534 AGCD01009154;GBDJ01171942;XM_013510271;XR_001232628;XR_001232629 XP_013365725 MODEL 8982033 protein-coding Trim42 tripartite motif containing 42 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955508 4959495 4984166 - 102023058 AGCD01065897;GBDF01089541;XM_005407776 XP_005407833 MODEL 8865540 protein-coding Prpf40a pre-mRNA processing factor 40A ENCODES a protein that exhibits proline-rich region binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear matrix (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955440 18083838 18128701 - 102008770 AGCD01036595;AGCD01036596;GBCE01097815;GBDI01081076;XM_005390816 XP_005390873 MODEL 8963331 protein-coding LOC102011070 vomeronasal type-1 receptor 4-like NW_004955603 546797 561763 + 102011070 AGCD01076853;AGCD01076854;AGCD01076855;XM_005414848 XP_005414905 MODEL 9001383 protein-coding LOC102005031 sulfotransferase 1C1-like NW_004955470 11811445 11825101 - 102005031 AGCD01052900;AGCD01052901;GBBH01222010;GBDJ01271388;XM_013522679 XP_013378133 MODEL 8766212 protein-coding Rufy2 RUN and FYVE domain containing 2 ENCODES a protein that exhibits SH3 domain binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955425 20632271 20658582 - 102007573 AGCD01025751;GBCE01097206;GBDF01000428;XM_005385993;XM_005385995;XM_005385997;XM_013514826;XR_261163 XP_005386050;XP_005386052;XP_005386054;XP_013370280 MODEL 8916360 protein-coding LOC102022578 heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like NW_004955467 3848579 3956203 + 102022578 AGCD01051347;AGCD01051348;AGCD01051349;AGCD01051350;AGCD01051351;AGCD01051352;AGCD01051353;AGCD01051354;GBBH01213909;GBCQ01153185;XM_013522023 XP_013377477 MODEL 8964166 protein-coding Rin1 Ras and Rab interactor 1 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN associative learning (ortholog); memory (ortholog); negative regulation of synaptic plasticity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); neuronal cell body (ortholog) NW_004955422 18989814 18996570 + 102014060 AGCD01022970;GBDJ01361249;XM_005384412 XP_005384469 MODEL 8850125 protein-coding LOC102019713 olfactory receptor 24 NW_004955495 157242 158152 + 102019713 AGCD01061604;AGCD01061605;XM_013505041 XP_013360495 MODEL 8941536 ncrna LOC102006108 uncharacterized LOC102006108 NW_004955411 31891671 31897535 - 102006108 AGCD01012289;GBDK01379399;XR_001232822;XR_001232823 MODEL 8978265 pseudo LOC102005743 zinc finger protein 140-like NW_004955515 861668 865164 + 102005743 AGCD01067211;XM_005408920 MODEL 8961889 protein-coding LOC102010318 seminal vesicle major clotting proteins-like NW_004955445 12149377 12156385 - 102010318 AGCD01039740;AGCD01039741;AGCD01039742;XM_005392442 XP_005392499 MODEL 8917623 protein-coding Trpc4 transient receptor potential cation channel subfamily C member 4 ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); calcium channel complex (ortholog); cation channel complex (ortholog) NW_004955431 8283585 8479524 + 102020596 AGCD01030124;AGCD01030125;AGCD01030126;GBDJ01262104;XM_005387650;XM_005387651;XM_013515720 XP_005387707;XP_005387708;XP_013371174 MODEL 8939295 pseudo LOC102003287 60S ribosomal protein L23a pseudogene NW_004955442 14142494 14143509 + 102003287 AGCD01037802 MODEL 39132909 snorna SNORD21 Small nucleolar RNA SNORD21 39131921 snorna SNORA70 Small nucleolar RNA SNORA70 8926846 protein-coding LOC102016565 uncharacterized LOC102016565 NW_004955408 5607325 5608412 - 102016565 AGCD01008145;XM_005376151 XP_005376208 MODEL 8711879 protein-coding Slc49a3 solute carrier family 49 member 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955514 289301 295443 - 102007146 AGCD01067006;GBDJ01187158;XM_005408673;XM_013506845;XM_013506846;XR_001231781 XP_005408730;XP_013362299;XP_013362300 MODEL 39133526 snrna U4 U4 spliceosomal RNA 10334414 ncrna LOC106147531 uncharacterized LOC106147531 NW_004955574 312795 317846 + 106147531 AGCD01075098;GBDF01280755;XR_001232452;XR_001232453 MODEL 8844099 protein-coding Pou2af1 POU class 2 homeobox associating factor 1 ENCODES a protein that exhibits DNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cellular response to virus (ortholog); germinal center B cell differentiation (ortholog); positive regulation of interleukin-6 production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) NW_004955412 13131229 13167150 - 102016035 AGCD01012829;GBDI01222451;XM_005378068;XM_005378069;XM_005378070;XM_005378071;XM_005378072;XM_013511006;XM_013511007 XP_005378125;XP_005378126;XP_005378127;XP_005378128;XP_005378129;XP_013366460;XP_013366461 MODEL 8985883 protein-coding Sh3glb2 SH3 domain containing GRB2 like, endophilin B2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN postsynaptic neurotransmitter receptor internalization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) NW_004955570 1370106 1379405 - 102025738 AGCD01074812;GBCE01028722;GBDJ01007498;XM_013509416;XM_013509417;XM_013509418;XM_013509419;XM_013509420;XM_013509421;XM_013509422;XM_013509423 XP_013364870;XP_013364871;XP_013364872;XP_013364873;XP_013364874;XP_013364875;XP_013364876;XP_013364877 MODEL 8869401 ncrna LOC102006479 uncharacterized LOC102006479 NW_004955497 7454409 7464014 - 102006479 AGCD01062676;GBDF01019845;XR_264210 MODEL 10141913 protein-coding Serpina10 serpin family A member 10 INVOLVED IN liver regeneration (ortholog); regulation of acrosome reaction (ortholog); PARTICIPATES IN coagulation cascade pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); Liver Metastasis (ortholog) NW_004955438 16335201 16345093 - 106149168 AGCD01035404;AGCD01035405;XM_013517250;XM_013517251 XP_013372704;XP_013372705 MODEL 8836856 protein-coding Rergl RERG like ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955413 14324734 14334992 - 102010353 AGCD01014040;GBDJ01387403;XM_005379035;XM_005379036 XP_005379092;XP_005379093 MODEL 8956245 protein-coding Lrp2bp LRP2 binding protein NW_004955403 23657994 23678042 + 102027369 AGCD01002249;AGCD01002250;GBBH01072551;XM_005373466;XM_005373467;XM_005373468;XR_001233531 XP_005373523;XP_005373524;XP_005373525 MODEL 8881813 pseudo LOC102006110 brain mitochondrial carrier protein 1 pseudogene NW_004955411 25443595 25445484 + 102006110 AGCD01012158 MODEL 8989914 pseudo LOC102008359 erythrocyte band 7 integral membrane protein pseudogene NW_004955572 890630 891453 - 102008359 AGCD01074927 MODEL 8968083 protein-coding Sp100 SP100 nuclear body protein ENCODES a protein that exhibits chromo shadow domain binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); maintenance of protein location (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); Mre11 complex (ortholog); nuclear body (ortholog) NW_004955453 4774739 4856238 - 102008057 AGCD01044698;AGCD01044699;AGCD01044700;GBCE01115892;XM_013519802;XM_013519803;XM_013519804;XM_013519805;XM_013519806;XM_013519807;XM_013519808;XM_013519809 XP_013375256;XP_013375257;XP_013375258;XP_013375259;XP_013375260;XP_013375261;XP_013375262;XP_013375263 MODEL 8875694 protein-coding Tma16 translation machinery associated 16 homolog ENCODES a protein that exhibits preribosome binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN ribosomal large subunit biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955403 41493624 41510162 - 102014852 AGCD01002721;GBDF01194384;XM_005373592 XP_005373649 MODEL 8728002 protein-coding Rnf223 ring finger protein 223 NW_004955486 9658706 9665467 + 102030321 AGCD01059195;GBBH01005840;XM_005404257;XM_013504294;XM_013504295 XP_005404314;XP_013359748;XP_013359749 MODEL 151707881 snorna snoZ40 Small nucleolar RNA Z40 8818665 pseudo LOC102012345 coiled-coil domain-containing protein 169-like NW_004955427 322526 326614 + 102012345 AGCD01026827 MODEL 8864638 pseudo LOC102004312 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 pseudogene NW_004955434 9625813 9626382 - 102004312 AGCD01032306 MODEL 8738905 protein-coding LOC102009123 transmembrane protease serine 11E NW_004955447 4505454 4611439 + 102009123 AGCD01040721;AGCD01040722;AGCD01040723;AGCD01040724;AGCD01040725;GBDF01013955;XM_005392824;XM_005392826;XM_013518541 XP_005392881;XP_005392883;XP_013373995 MODEL 8893681 ncrna LOC102007596 uncharacterized LOC102007596 NW_004955441 5524667 5614034 - 102007596 AGCD01036879;AGCD01036880;GBDF01251487;XR_262050 MODEL 8952553 protein-coding Rbbp8nl RBBP8 N-terminal like ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955528 1641291 1655920 + 102027897 AGCD01069567;GBBH01026084;XM_005410020;XM_013507496;XM_013507497 XP_005410077;XP_013362950;XP_013362951 MODEL 8848504 protein-coding LOC102020026 olfactory receptor 7G1-like NW_004955495 166030 171481 - 102020026 AGCD01061606;XM_005406115 XP_005406172 MODEL 8913123 protein-coding Plaat5 phospholipase A and acyltransferase 5 ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); INVOLVED IN N-acylphosphatidylethanolamine metabolic process (ortholog) NW_004955599 217365 247914 - 102029811 AGCD01076631;AGCD01076632;AGCD01076633;AGCD01076634;AGCD01076635;AGCD01076636;GBDF01006273;XM_005414748;XM_005414749 XP_005414805;XP_005414806 MODEL 8752812 protein-coding Rpp38 ribonuclease P/MRP subunit p38 ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog); nucleolus (ortholog) NW_004955429 19358765 19360973 - 102003894 AGCD01028948;GBCE01098131;GBCQ01139986;XM_005387145 XP_005387202 MODEL 8806214 protein-coding Ppp6r2 protein phosphatase 6 regulatory subunit 2 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Charcot-Marie-Tooth disease type 4B3 (ortholog); FOUND IN cytosol (ortholog) NW_004955413 33362879 33425361 + 102026310 AGCD01014666;AGCD01014667;AGCD01014668;AGCD01014669;GBCB01002220;XM_005379557;XM_005379558;XM_005379559;XM_005379560;XM_005379561;XM_013511403;XM_013511404;XM_013511405;XM_013511406;XM_013511407 XP_005379614;XP_005379615;XP_005379616;XP_005379617;XP_005379618;XP_013366857;XP_013366858;XP_013366859;XP_013366860;XP_013366861 MODEL 8799894 pseudo LOC102011538 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955477 4017638 4038493 + 102011538 AGCD01055577 MODEL 8793435 protein-coding Pmm1 phosphomannomutase 1 ENCODES a protein that exhibits phosphomannomutase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); mannose metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuronal cell body (ortholog) NW_004955413 27090291 27097088 - 102020552 AGCD01014492;GBDI01127252;XM_005379355 XP_005379412 MODEL 8716119 protein-coding Trim44 tripartite motif containing 44 INVOLVED IN negative regulation of protein K48-linked ubiquitination (ortholog); positive regulation of cytokine-mediated signaling pathway (ortholog); positive regulation of defense response to virus by host (ortholog); ASSOCIATED WITH aniridia (ortholog); Aniridia 3 (ortholog); Cardiomegaly (ortholog); FOUND IN cytoplasm (ortholog) NW_004955422 10580002 10690349 - 102008739 AGCD01022741;AGCD01022742;AGCD01022743;GBCB01005350;XM_005384121 XP_005384178 MODEL 9006576 pseudo LOC102022585 N-alpha-acetyltransferase 50 pseudogene NW_004955468 4644545 4645075 + 102022585 AGCD01051919 MODEL 8812703 protein-coding LOC102011071 PRAME family member 8-like NW_004955618 112533 125114 - 102011071 AGCD01077296;AGCD01077297;GBDF01153091;XM_005415002 XP_005415059 MODEL 8968408 protein-coding Ero1b endoplasmic reticulum oxidoreductase 1 beta ENCODES a protein that exhibits disulfide oxidoreductase activity (ortholog); flavin-dependent sulfhydryl oxidase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); extracellular matrix organization (ortholog); glucose homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); membrane (ortholog) NW_004955492 3845406 3911671 + 102021987 AGCD01060701;AGCD01060702;AGCD01060703;AGCD01060704;AGCD01060705;GBBH01198228;GBDF01009565;XM_013504712 XP_013360166 MODEL 730468952 snorna SNORA43 Small nucleolar RNA SNORA43 8771179 ncrna LOC102018535 uncharacterized LOC102018535 NW_004955443 7145804 7158741 + 102018535 AGCD01038273;GBDJ01214408;XR_001235482;XR_001235483 MODEL 8720197 protein-coding Psme3ip1 proteasome activator subunit 3 interacting protein 1 INVOLVED IN negative regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955433 14813688 14843446 - 102023627 AGCD01031729;AGCD01031730;GBCB01023782;XM_005388378;XM_005388379;XM_005388380;XM_005388381;XM_005388383;XM_013516131 XP_005388435;XP_005388436;XP_005388437;XP_005388438;XP_005388440;XP_013371585 MODEL 730469134 snorna SNORA26 Small nucleolar RNA SNORA26 8901444 ncrna LOC102010321 uncharacterized LOC102010321 NW_004955402 42833311 42840895 + 102010321 AGCD01001049;GBCB01051675;XR_259085 MODEL 9000553 protein-coding Cables2 Cdk5 and Abl enzyme substrate 2 INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); gastrulation (ortholog); gene expression (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955528 1656475 1674632 + 102028230 AGCD01069567;AGCD01069568;GBCQ01012494;XM_005410021;XM_013507498 XP_005410078;XP_013362952 MODEL 8796085 ncrna LOC102008772 uncharacterized LOC102008772 NW_004955442 14332729 14334118 - 102008772 AGCD01037810;GBBH01025947;XR_001235407 MODEL 9016101 pseudo LOC102011930 tripartite motif-containing protein 59-like NW_004955450 13491725 13492879 - 102011930 AGCD01042735 MODEL 8863476 protein-coding St14 ST14 transmembrane serine protease matriptase ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN epithelial cell morphogenesis involved in placental branching (ortholog); keratinocyte differentiation (ortholog); neural tube closure (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis 11 (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN basolateral plasma membrane (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955412 31091313 31129050 + 102022066 AGCD01013325;GBDK01008740;XM_005378564;XM_013511160 XP_005378621;XP_013366614 MODEL 8764986 protein-coding Wipf2 WAS/WASL interacting protein family member 2 ASSOCIATED WITH esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955451 14821924 14856304 + 102011269 AGCD01043575;AGCD01043576;AGCD01043577;AGCD01043578;GBDI01020357;XM_005394352 XP_005394409 MODEL 8917689 protein-coding Rufy3 RUN and FYVE domain containing 3 ENCODES a protein that exhibits dynactin binding (ortholog); INVOLVED IN actin filament organization (ortholog); negative regulation of axonogenesis (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955447 2200788 2266008 - 102022439 AGCD01040535;AGCD01040536;GBCE01184705;XM_005392776;XM_005392777;XM_005392778;XM_005392779;XM_013518505;XM_013518506 XP_005392833;XP_005392834;XP_005392835;XP_005392836;XP_013373959;XP_013373960 MODEL 8836314 protein-coding LOC102013512 olfactory receptor 4C12-like NW_004955422 189260 205015 - 102013512 AGCD01022401;GBDF01234708;XM_005383939 XP_005383996 MODEL 8955397 protein-coding Rin2 Ras and Rab interactor 2 INVOLVED IN positive regulation of endothelial cell migration (ortholog); positive regulation of endothelial cell-matrix adhesion (ortholog); positive regulation of vasculogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955415 27953670 28130122 + 102020331 AGCD01016636;AGCD01016637;GBDF01062630;XM_013512179;XM_013512180;XM_013512181;XM_013512182;XM_013512183;XM_013512184 XP_013367633;XP_013367634;XP_013367635;XP_013367636;XP_013367637;XP_013367638 MODEL 8998848 pseudo LOC102011081 SH3 domain-binding glutamic acid-rich-like protein pseudogene NW_004955406 24054455 24054920 + 102011081 AGCD01006188 MODEL 39133272 snrna U4 U4 spliceosomal RNA 8931538 protein-coding Resf1 retroelement silencing factor 1 ENCODES a protein that exhibits histone methyltransferase binding (ortholog); INVOLVED IN response to bacterium (ortholog); transposable element silencing by heterochromatin formation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955505 3684848 3709624 - 102011340 AGCD01065047;GBDJ01085100;XM_005407130;XM_005407131;XM_013505939 XP_005407187;XP_005407188;XP_013361393 MODEL 8933403 protein-coding Sp110 SP110 nuclear body protein INVOLVED IN positive regulation of apoptotic process (ortholog); response to bacterium (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955453 4915541 4939438 + 102028713 AGCD01044701;GBCQ01123762;XM_005395419;XM_005395420;XM_013519981 XP_005395476;XP_005395477;XP_013375435 MODEL 10067484 ncrna LOC106147532 uncharacterized LOC106147532 NW_004955574 325570 331331 + 106147532 AGCD01075098;GBBH01172280;XR_001232454;XR_001232455 MODEL 8789974 protein-coding Trpc4ap transient receptor potential cation channel subfamily C member 4 associated protein ENCODES a protein that exhibits phosphatase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN hair follicle maturation (ortholog); protein ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); cytosol (ortholog) NW_004955422 26301937 26383464 + 102016719 AGCD01023284;AGCD01023285;AGCD01023286;AGCD01023287;AGCD01023288;GBDF01005507;XM_005384808;XM_005384809 XP_005384865;XP_005384866 MODEL 8927618 ncrna LOC102016566 uncharacterized LOC102016566 NW_004955408 23253468 23276002 - 102016566 AGCD01008586;AGCD01008587;GBDI01211247;XR_259704 MODEL 8845116 protein-coding LOC102018539 zinc finger protein 33B-like NW_004955445 10896408 10911266 + 102018539 AGCD01039680;GBDF01291239;XM_005392376 XP_005392433 MODEL 8986911 protein-coding Rnf224 ring finger protein 224 ASSOCIATED WITH cervical cancer (ortholog) NW_004955513 5224740 5227395 + 102011228 AGCD01066963;GBCQ01136391;XM_005408607 XP_005408664 MODEL 39133527 snrna U4 U4 spliceosomal RNA 9029629 protein-coding Slc49a4 solute carrier family 49 member 4 INVOLVED IN pyridoxine transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955427 22005161 22093700 + 102025270 AGCD01027464;GBBH01172313;GBCB01007670;XM_005386622 XP_005386679 MODEL 730469217 misc_rna PVT1_2 Pvt1 onco conserved region 2 8985725 ncrna LOC102020029 uncharacterized LOC102020029 NW_004955425 15454418 15465300 - 102020029 AGCD01025581;AGCD01025582;GBDK01228458;XR_001234260 MODEL 8953375 protein-coding Prpf40b pre-mRNA processing factor 40B ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN nuclear body (ortholog) NW_004955547 232286 252922 + 102003384 AGCD01072140;AGCD01072141;GBDF01119507;XM_005411832;XM_005411833;XM_005411834;XM_005411836;XM_013508466 XP_005411889;XP_005411890;XP_005411891;XP_005411893;XP_013363920 MODEL 8820137 protein-coding Spock1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 ENCODES a protein that exhibits calcium ion binding (ortholog); cysteine-type endopeptidase inhibitor activity (ortholog); metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN central nervous system neuron differentiation (ortholog); negative regulation of cell-substrate adhesion (ortholog); negative regulation of neuron projection development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); neuromuscular junction (ortholog) NW_004955408 31954622 32465463 - 102003518 AGCD01008837;AGCD01008838;AGCD01008839;AGCD01008840;AGCD01008841;AGCD01008842;GBCB01121360;GBCE01057421;XM_005376592 XP_005376649 MODEL 8753995 protein-coding Rpp40 ribonuclease P/MRP subunit p40 ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog); ribonuclease MRP complex (ortholog) NW_004955465 8540500 8550255 + 102009263 AGCD01050476;GBDF01223477;XM_005398880 XP_005398937 MODEL 8863448 protein-coding Serpina12 serpin family A member 12 ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); INVOLVED IN glucose metabolic process (ortholog); negative regulation of gluconeogenesis (ortholog); negative regulation of lipid biosynthetic process (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); mal de Meleda (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955438 17826596 17849341 + 102020610 AGCD01035454;AGCD01035455;GBDF01057280;XM_005390390;XM_013517145 XP_005390447;XP_013372599 MODEL 8964666 pseudo LOC102006483 uncharacterized LOC102006483 NW_004955503 49005 53085 - 102006483 AGCD01064480 MODEL 8765697 protein-coding LOC102010322 cytochrome P450 1A2 ENCODES a protein that exhibits caffeine oxidase activity (ortholog); demethylase activity (ortholog); enzyme binding (ortholog); INVOLVED IN alkaloid metabolic process (ortholog); cellular respiration (ortholog); cellular response to cadmium ion (ortholog); PARTICIPATES IN axitinib pharmacokinetics pathway; caffeine pharmacokinetics pathway; clomipramine pharmacokinetics pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); Atrophy (ortholog) NW_004955450 3165107 3171894 - 102010322 AGCD01042426;GBBH01140851;XM_005393544;XM_005393545 XP_005393601;XP_005393602 MODEL 8821590 protein-coding LOC102022587 interleukin-36 beta NW_004955470 1261429 1274387 + 102022587 AGCD01052631;AGCD01052632;AGCD01052633;GBDI01161382;XM_005400590 XP_005400647 MODEL 8893361 protein-coding Lrp3 LDL receptor related protein 3 INVOLVED IN negative regulation of fat cell differentiation (ortholog); negative regulation of gene expression (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955468 2957156 2967678 + 102026624 AGCD01051849;GBCE01118149;GBDJ01017389;XM_013522476 XP_013377930 MODEL 8755376 protein-coding LOC102003292 E3 ubiquitin-protein ligase RNF114 NW_004955445 8256029 8268349 - 102003292 AGCD01039569;AGCD01039570;GBBH01035032;GBCB01026100;XM_005392324 XP_005392381 MODEL 8924479 protein-coding LOC102006112 olfactory receptor 147-like NW_004955412 25143673 25144628 - 102006112 AGCD01013136;XM_005378416 XP_005378473 MODEL 39131710 snorna SNORA71 Small nucleolar RNA SNORA71 730469304 snorna snoZ40 Small nucleolar RNA Z40 9006878 protein-coding Erp27 endoplasmic reticulum protein 27 ASSOCIATED WITH acute myeloid leukemia (ortholog); stomach cancer (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) NW_004955413 11650920 11670127 - 102004050 AGCD01013966;GBCE01143801;XM_005379014;XM_013511584;XM_013511585 XP_005379071;XP_013367038;XP_013367039 MODEL 8894372 protein-coding LOC102004314 vomeronasal type-2 receptor 116-like NW_004955524 1994507 2020685 + 102004314 AGCD01068790;AGCD01068791;AGCD01068792;XM_013507192 XP_013362646 MODEL 8761309 protein-coding LOC102009124 uncharacterized LOC102009124 NW_004955447 15117933 15159860 - 102009124 AGCD01041033;AGCD01041034;AGCD01041035;AGCD01041036;AGCD01041037;GBDF01196985;XM_013518482 XP_013373936 MODEL 8739026 protein-coding Rbbp9 RB binding protein 9, serine hydrolase ENCODES a protein that exhibits serine hydrolase activity (ortholog); INVOLVED IN positive regulation of gene expression (ortholog); regulation of cell population proliferation (ortholog); response to nematode (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955415 27037875 27044558 - 102017450 AGCD01016622;GBCQ01007300;XM_005380932 XP_005380989 MODEL 8859885 protein-coding Rnf225 ring finger protein 225 NW_004955584 1040559 1042430 + 102029460 AGCD01075976;AGCD01075977;GBCE01094428;XM_005414420 XP_005414477 MODEL 9062464 ncrna LOC102019714 uncharacterized LOC102019714 NW_004955497 4488636 4491965 - 102019714 AGCD01062577;GBDF01076815;XR_264204 MODEL 39133528 snrna U4 U4 spliceosomal RNA 8940114 protein-coding LOC102008777 atherin-like NW_004955558 851314 852320 + 102008777 AGCD01073394;GBCE01172818;GBDF01225096;XM_013508881 XP_013364335 MODEL 9067860 protein-coding Piezo1 piezo type mechanosensitive ion channel component 1 (Er blood group) ENCODES a protein that exhibits identical protein binding (ortholog); mechanosensitive monoatomic cation channel activity (ortholog); mechanosensitive monoatomic ion channel activity (ortholog); INVOLVED IN detection of mechanical stimulus (ortholog); monoatomic cation transport (ortholog); positive regulation of cell-cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cuticular plate (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955541 2618167 2655349 - 102027113 AGCD01071419;GBDI01005578;XM_013507959;XM_013507960;XM_013507961;XM_013507962 XP_013363413;XP_013363414;XP_013363415;XP_013363416 MODEL 8938590 protein-coding Sh3kbp1 SH3 domain containing kinase binding protein 1 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN positive regulation of B cell activation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955509 6157 344930 - 102003043 AGCD01065924;AGCD01065925;AGCD01065926;AGCD01065927;AGCD01065928;AGCD01065929;AGCD01065930;GBBH01118244;GBCB01003048;XM_005407792 XP_005407849 MODEL 8817327 pseudo LOC102011539 succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial pseudogene NW_004955477 3913414 3916387 - 102011539 AGCD01055577 MODEL 8854654 protein-coding Pmm2 phosphomannomutase 2 ENCODES a protein that exhibits phosphomannomutase activity (ortholog); INVOLVED IN GDP-mannose biosynthetic process (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); amenorrhea (ortholog); anemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuronal cell body (ortholog) NW_004955442 9390789 9411722 - 102016753 AGCD01037679;GBBH01090482;XM_005391214;XM_005391216;XM_005391217 XP_005391271;XP_005391273;XP_005391274 MODEL 10184969 protein-coding Tma7 translation machinery associated 7 homolog NW_004955420 16389256 16389553 - 106148326 AGCD01020993;GBDF01208273;XM_013513336 XP_013368790 MODEL 39133417 snorna SNORD22 Small nucleolar RNA SNORD22 730469159 snorna SNORA43 Small nucleolar RNA SNORA43 8802157 protein-coding LOC102013514 vomeronasal type-1 receptor 4-like NW_004955494 8280036 8280923 + 102013514 AGCD01061582;XM_005405545 XP_005405602 MODEL 8776186 protein-coding LOC102007598 keratin, type II cuticular Hb5-like NW_004955547 2695857 2706205 + 102007598 AGCD01072294;GBDK01062119;XM_005411937 XP_005411994 MODEL 9061999 ncrna LOC102005032 uncharacterized LOC102005032 NW_004955414 25971218 25973185 - 102005032 AGCD01015636;GBCE01175775;XR_260196 MODEL 8911630 protein-coding LOC102022588 olfactory receptor 51G2-like NW_004955414 20645409 20646350 + 102022588 AGCD01015385;XM_005380064 XP_005380121 MODEL 8738421 protein-coding Resp18 regulated endocrine specific protein 18 INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); hypertension (ortholog); renal fibrosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); Golgi lumen (ortholog) NW_004955453 14106430 14111920 + 102008493 AGCD01044858;GBDI01385707;XM_005395532 XP_005395589 MODEL 10386944 ncrna LOC106147533 uncharacterized LOC106147533 NW_004955575 629172 630354 + 106147533 AGCD01075227;GBDI01251521;XR_001232456 MODEL 8841602 ncrna LOC102018544 uncharacterized LOC102018544 NW_004955577 464682 467971 + 102018544 AGCD01075396;GBCQ01030476;XR_265080 MODEL 8940674 protein-coding Cabp1 calcium binding protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN modification of postsynaptic actin cytoskeleton (ortholog); negative regulation of cell communication by electrical coupling (ortholog); negative regulation of protein import into nucleus (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); melanoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955455 11000763 11068922 - 102007300 AGCD01045974;AGCD01045975;AGCD01045976;AGCD01045977;AGCD01045978;GBDF01187384;XM_005396494;XM_005396495;XM_005396496 XP_005396551;XP_005396552;XP_005396553 MODEL 8802784 protein-coding LOC102005749 tenascin-X-like NW_004955437 562600 578348 - 102005749 AGCD01034146;AGCD01034147;AGCD01034148;AGCD01034149;GBDI01324923;GBDK01430395;XM_013516899 XP_013372353 MODEL 8973084 protein-coding LOC102011936 nuclear pore complex protein Nup50-like NW_004955801 1035 19256 - 102011936 AGCD01078375;GBDK01393605;XM_005415113;XM_013510195;XM_013510196 XP_005415170;XP_013365649;XP_013365650 MODEL 8883002 protein-coding Slc4a1 solute carrier family 4 member 1 (Diego blood group) ENCODES a protein that exhibits actin binding (ortholog); ankyrin binding (ortholog); bicarbonate transmembrane transporter activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); blood coagulation (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH Acidoses (ortholog); Alkalosis (ortholog); anemia (ortholog); FOUND IN ankyrin-1 complex (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) NW_004955451 17318600 17330943 - 102011722 AGCD01043740;AGCD01043741;GBDF01076823;XM_005394528;XM_005394529;XM_013519370 XP_005394585;XP_005394586;XP_013374824 MODEL 8978167 protein-coding St18 ST18 C2H2C-type zinc finger transcription factor ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN interleukin-1-mediated signaling pathway (ortholog); interleukin-6-mediated signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN nucleus (ortholog); protein-DNA complex (ortholog) NW_004955454 11715538 12016396 - 102027811 AGCD01045395;AGCD01045396;AGCD01045397;AGCD01045398;AGCD01045399;AGCD01045400;AGCD01045401;AGCD01045402;AGCD01045403;GBDF01253942;XM_005396053;XM_005396055;XM_013520259;XM_013520260;XM_013520261;XM_013520262;XM_013520263 XP_005396110;XP_005396112;XP_013375713;XP_013375714;XP_013375715;XP_013375716;XP_013375717 MODEL 8995981 pseudo LOC102019715 translationally-controlled tumor protein pseudogene NW_004955500 3829536 3830051 - 102019715 AGCD01063758 MODEL 8922723 protein-coding Wipf3 WAS/WASL interacting protein family member 3 ENCODES a protein that exhibits SH3 domain binding (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN synapse (ortholog) NW_004955410 31166874 31227377 + 102027826 AGCD01011317;AGCD01011318;GBCQ01031184;XM_013510497 XP_013365951 MODEL 8902344 pseudo LOC102011085 dynein light chain 1, cytoplasmic-like NW_004955407 27230910 27231275 + 102011085 AGCD01007548 MODEL 8944601 pseudo LOC102012346 protein FAM184A pseudogene NW_004955428 4406203 4408237 + 102012346 AGCD01027690 MODEL 8846916 protein-coding Spock2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 ENCODES a protein that exhibits calcium ion binding (ortholog); extracellular matrix binding (ortholog); glycosaminoglycan binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955437 19494102 19519218 + 102003282 AGCD01034856;GBDK01021743;XM_005390019 XP_005390076 MODEL 39133273 snrna U4 U4 spliceosomal RNA 8700554 pseudo LOC102011543 DCN1-like protein 1 pseudogene NW_004955484 8471459 8472600 - 102011543 AGCD01058384 MODEL 9007740 protein-coding Sp140 SP140 nuclear body protein ASSOCIATED WITH acute myeloid leukemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleus (ortholog) NW_004955453 4864812 4911699 - 102008376 AGCD01044700;AGCD01044701;GBDI01121434;XM_013519810;XM_013519811 XP_013375264;XP_013375265 MODEL 730469594 snorna SNORA26 Small nucleolar RNA SNORA26 8770946 protein-coding Psme4 proteasome activator subunit 4 ENCODES a protein that exhibits peptidase activator activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); proteasomal ubiquitin-independent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955441 19586567 19663335 - 102004326 AGCD01037356;AGCD01037357;AGCD01037358;GBCE01134980;GBDJ01020753;XM_013517590 XP_013373044 MODEL 9026766 protein-coding Trpc5 transient receptor potential cation channel subfamily C member 5 ENCODES a protein that exhibits actin binding (ortholog); actinin binding (ortholog); ATPase binding (ortholog); INVOLVED IN negative regulation of dendrite morphogenesis (ortholog); neuron apoptotic process (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH Albuminuria (ortholog); Congenital Microtia (ortholog); dental enamel hypoplasia (ortholog); FOUND IN calcium channel complex (ortholog); cation channel complex (ortholog); dendrite (ortholog) NW_004955490 3777756 4057275 + 102029978 AGCD01060174;AGCD01060175;AGCD01060176;AGCD01060177;AGCD01060178;AGCD01060179;AGCD01060180;XM_005404633;XM_013504508 XP_005404690;XP_013359962 MODEL 8897662 protein-coding Ppp6r3 protein phosphatase 6 regulatory subunit 3 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955422 17247133 17387870 - 102030325 AGCD01022917;AGCD01022918;AGCD01022919;AGCD01022920;AGCD01022921;GBCE01096047;XM_005384268;XM_005384269;XM_005384270;XM_005384271;XM_005384272;XM_005384273;XM_005384275;XM_005384276;XM_005384277;XM_013514098;XM_013514100;XM_013514101 XP_005384325;XP_005384326;XP_005384327;XP_005384328;XP_005384329;XP_005384330;XP_005384332;XP_005384333;XP_005384334;XP_013369552;XP_013369554;XP_013369555 MODEL 730468972 misc_rna PVT1_5 Pvt1 onco conserved region 5 9006122 protein-coding Trim45 tripartite motif containing 45 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN bone development (ortholog); negative regulation of inflammatory response (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955435 20216685 20225061 - 102006946 AGCD01033447;GBDF01194974;XM_005389053 XP_005389110 MODEL 39131368 protein-coding PRPF6 pre-mRNA processing factor 6 39133529 snrna U4 U4 spliceosomal RNA 9003816 ncrna LOC102008361 uncharacterized LOC102008361 NW_004955448 3629090 3639590 + 102008361 AGCD01041336;XR_001235764;XR_262459 MODEL 8960832 pseudo LOC102020030 protein S100-A10 pseudogene NW_004955500 8195394 8197521 - 102020030 AGCD01063984 MODEL 8929936 protein-coding LOC102008778 olfactory receptor 1361-like NW_004955442 14157622 14158563 - 102008778 AGCD01037803;XM_005391854 XP_005391911 MODEL 8960607 ncrna LOC102011937 uncharacterized LOC102011937 NW_004955403 40009315 40019121 + 102011937 AGCD01002656;AGCD01002657;GBDF01192639;XR_259230 MODEL 9008967 protein-coding Serpina3 serpin family A member 3 ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Arterial Occlusive Diseases (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog) NW_004955438 17758763 17766113 - 102020287 AGCD01035451;GBCE01004471;XM_005390389 XP_005390446 MODEL 9056278 protein-coding Rprd1a regulation of nuclear pre-mRNA domain containing 1A ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN RNA polymerase II promoter clearance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription preinitiation complex (ortholog) NW_004955402 22584600 22646046 - 102008479 AGCD01000607;GBCQ01125409;XM_005372805;XM_013510071 XP_005372862;XP_013365525 MODEL 39131715 snorna SNORA71 Small nucleolar RNA SNORA71 730469171 snorna SNORA43 Small nucleolar RNA SNORA43 8752181 pseudo LOC102004316 myb/SANT-like DNA-binding domain-containing protein 3 pseudogene NW_004955530 335889 336767 + 102004316 AGCD01069846 MODEL 8855045 protein-coding Lrp4 LDL receptor related protein 4 ENCODES a protein that exhibits apolipoprotein binding (ortholog); coreceptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN amyloid-beta clearance by cellular catabolic process (ortholog); dendrite morphogenesis (ortholog); dorsal/ventral pattern formation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cenani-Lenz syndactyly syndrome (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); neuromuscular junction (ortholog) NW_004955422 1191338 1238227 + 102003144 AGCD01022449;AGCD01022450;AGCD01022451;GBDF01290662;GBDJ01313047;XM_013513935 XP_013369389 MODEL 39133275 snrna U4 U4 spliceosomal RNA 8707882 protein-coding LOC102011087 olfactory receptor 9K2-like NW_004955458 2223510 2224451 + 102011087 AGCD01047218;XM_005397237 XP_005397294 MODEL 9054170 protein-coding Erp29 endoplasmic reticulum protein 29 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); negative regulation of gene expression (ortholog); negative regulation of protein secretion (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955482 8572227 8579589 + 102006663 AGCD01057536;AGCD01057537;GBDF01045015;XM_005403185;XM_005403186 XP_005403242;XP_005403243 MODEL 8936991 protein-coding Snph syntaphilin INVOLVED IN neuron differentiation (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); mitochondrial membrane (ortholog) NW_004955596 489174 531226 + 102013129 AGCD01076519;AGCD01076520;AGCD01076521;GBDF01288084;XM_005414698;XM_005414699;XM_013510013;XM_013510015;XM_013510016;XM_013510017;XM_013510018 XP_005414755;XP_005414756;XP_013365467;XP_013365469;XP_013365470;XP_013365471;XP_013365472 MODEL 9019310 ncrna LOC102005750 uncharacterized LOC102005750 NW_004955438 21332657 21334526 - 102005750 AGCD01035537;GBDK01039687;XR_261957 MODEL 8796665 protein-coding Rnf24 ring finger protein 24 ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955415 14755539 14816046 - 102005369 AGCD01016309;AGCD01016310;AGCD01016311;AGCD01016312;GBDF01075350;XM_005380811 XP_005380868 MODEL 8822692 protein-coding Rufy4 RUN and FYVE domain containing 4 ENCODES a protein that exhibits dynactin binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to interleukin-4 (ortholog); multivesicular body-lysosome fusion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN autophagosome (ortholog); endolysosome (ortholog); lysosome (ortholog) NW_004955453 15243125 15259086 - 102016885 AGCD01044890;GBCE01034218;XM_005395668;XM_013519836 XP_005395725;XP_013375290 MODEL 8772552 ncrna LOC102006486 uncharacterized LOC102006486 NW_004955429 12941851 12943908 - 102006486 AGCD01028733;GBDI01366543;XR_261327 MODEL 8771779 pseudo LOC102010323 40S ribosomal protein S20 pseudogene NW_004955596 302819 303144 - 102010323 AGCD01076514 MODEL 8813230 protein-coding Rin3 Ras and Rab interactor 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of mast cell chemotaxis (ortholog); negative regulation of receptor internalization (ortholog); regulation of vesicle size (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955438 14777866 14898572 + 102027340 AGCD01035350;AGCD01035351;AGCD01035352;AGCD01035353;AGCD01035354;GBDF01041022;GBDJ01173811;XM_013517215 XP_013372669 MODEL 9010161 protein-coding Sh3pxd2a SH3 and PX domains 2A ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); osteoclast fusion (ortholog); reactive oxygen species metabolic process (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); podosome (ortholog) NW_004955485 6811857 7008011 + 102030427 AGCD01058629;AGCD01058630;GBDF01004113;GBDI01009548;XM_005403799 XP_005403856 MODEL 9048694 protein-coding St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 ENCODES a protein that exhibits beta-galactoside (CMP) alpha-2,3-sialyltransferase activity (ortholog); INVOLVED IN ganglioside biosynthetic process (ortholog); glycoprotein biosynthetic process (ortholog); memory B cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Enterovirus Infections (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi medial cisterna membrane (ortholog); Golgi trans cisterna membrane (ortholog) NW_004955461 7960901 8036221 - 102016454 AGCD01048925;GBCB01003604;XM_005398028;XM_013521328;XM_013521329;XM_013521330 XP_005398085;XP_013376782;XP_013376783;XP_013376784 MODEL 9067337 protein-coding LOC102006113 beta-galactosidase-1-like protein 3 NW_004955412 35224061 35251279 + 102006113 AGCD01013407;GBDF01102556;XM_013510984 XP_013366438 MODEL 8715938 pseudo LOC102003293 exportin-6 pseudogene NW_004955445 11816035 11825133 + 102003293 AGCD01039717 MODEL 10244354 ncrna LOC106147534 uncharacterized LOC106147534 NW_004955575 153913 162288 - 106147534 AGCD01075204;AGCD01075205;GBDK01152282;XR_001232457;XR_001232458 MODEL 8936534 protein-coding Pmp22 peripheral myelin protein 22 ENCODES a protein that exhibits protein-membrane adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adult locomotory behavior (ortholog); adult walking behavior (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); aspiration pneumonia (ortholog); astigmatism (ortholog); FOUND IN bicellular tight junction (ortholog); cell surface (ortholog); compact myelin (ortholog) NW_004955467 2422181 2456925 + 102021226 AGCD01051310;GBBH01065423;XM_005399333;XM_005399334 XP_005399390;XP_005399391 MODEL 40834591 protein-coding TMA7 translation machinery associated 7 homolog 8754261 protein-coding Piezo2 piezo type mechanosensitive ion channel component 2 ENCODES a protein that exhibits mechanosensitive monoatomic cation channel activity (ortholog); mechanosensitive monoatomic ion channel activity (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN detection of mechanical stimulus involved in sensory perception (ortholog); detection of renal blood flow (ortholog); monoatomic cation transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnodactyly (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN cuticular plate (ortholog); neuronal cell body membrane (ortholog); plasma membrane (ortholog) NW_004955402 1534619 1873143 + 102018546 AGCD01000059;AGCD01000060;AGCD01000061;GBBH01055058;XM_005372584;XM_013514699;XM_013514720 XP_005372641;XP_013370153;XP_013370174 MODEL 9055587 pseudo LOC102008782 protein SET-like NW_004955563 171952 176650 - 102008782 AGCD01074050;AGCD01074051 MODEL 8909297 protein-coding Wipi1 WD repeat domain, phosphoinositide interacting 1 ENCODES a protein that exhibits nuclear androgen receptor binding (ortholog); nuclear estrogen receptor binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH cholestasis (ortholog); lipid storage disease (ortholog); FOUND IN autophagosome membrane (ortholog); cytoplasm (ortholog); early endosome membrane (ortholog) NW_004955478 4309975 4341107 + 102028856 AGCD01055847;GBDF01159484;XM_013503209;XM_013503210;XM_013503211 XP_013358663;XP_013358664;XP_013358665 MODEL 8733101 protein-coding LOC102016567 olfactory receptor 6C2-like NW_004955458 2956357 2957295 + 102016567 AGCD01047260;XM_005397248 XP_005397305 MODEL 9037669 protein-coding LOC102012347 uncharacterized LOC102012347 NW_004955508 3322424 3325128 + 102012347 AGCD01065806;GBCQ01193228;XM_005407736 XP_005407793 MODEL 8920840 protein-coding LOC102009127 extracellular matrix protein 2 NW_004955580 238638 245468 + 102009127 AGCD01075592;AGCD01075593;GBDI01378283;XM_005414221 XP_005414278 MODEL 8939669 pseudo LOC102018549 14-3-3 protein sigma-like NW_004955451 4012131 4013628 + 102018549 AGCD01043087 MODEL 8717228 protein-coding Psmf1 proteasome inhibitor subunit 1 ENCODES a protein that exhibits proteasome binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of proteasomal protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955596 381080 414307 + 102011068 AGCD01076517;GBDF01007515;XM_005414689 XP_005414746 MODEL 8999009 protein-coding Leng1 leukocyte receptor cluster member 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); melanoma (ortholog) NW_004955604 106509 109564 + 102020509 AGCD01076862;AGCD01076863;GBBH01156148;GBCQ01098557;XM_013510091 XP_013365545 MODEL 8822595 protein-coding LOC102011088 olfactory receptor 1361-like NW_004955408 1647226 1658966 + 102011088 AGCD01007970;XM_005376563 XP_005376620 MODEL 8776073 protein-coding Trpc5os TRPC5 opposite strand NW_004955490 3952565 3981690 - 102029636 AGCD01060178;AGCD01060179;GBDF01209797;XM_005404632;XM_013504509 XP_005404689;XP_013359963 MODEL 8876558 protein-coding Cabp2 calcium binding protein 2 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN sensory perception of sound (ortholog); visual perception (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive nonsyndromic deafness 93 (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955422 17967313 17972468 + 102013306 AGCD01022933;XM_005384309;XM_005384310 XP_005384366;XP_005384367 MODEL 39133530 snrna U4 U4 spliceosomal RNA 8954718 protein-coding Slc4a10 solute carrier family 4 member 10 ENCODES a protein that exhibits sodium,bicarbonate:chloride antiporter activity (ortholog); sodium:bicarbonate symporter activity (ortholog); INVOLVED IN brain morphogenesis (ortholog); locomotory exploration behavior (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cognitive disorder (ortholog); FOUND IN apical dendrite (ortholog); apical plasma membrane (ortholog); axon terminus (ortholog) NW_004955449 11879070 12159981 - 102019870 AGCD01042094;AGCD01042095;AGCD01042096;AGCD01042097;AGCD01042098;AGCD01042099;AGCD01042100;AGCD01042101;AGCD01042102;AGCD01042103;AGCD01042104;AGCD01042105;AGCD01042106;GBBH01068682;XM_005393323;XM_005393324;XM_005393329 XP_005393380;XP_005393381;XP_005393386 MODEL 8860675 ncrna LOC102007599 uncharacterized LOC102007599 NW_004955556 1440615 1452951 + 102007599 AGCD01073194;GBCE01045813;XR_264977 MODEL 8798179 pseudo LOC102005033 COMM domain-containing protein 2 pseudogene NW_004955414 29282270 29282913 - 102005033 AGCD01015702 MODEL 8971979 ncrna LOC102022592 uncharacterized LOC102022592 NW_004955415 28798790 28804171 - 102022592 AGCD01016645;XR_260321 MODEL 8742870 protein-coding Spock3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); metalloendopeptidase inhibitor activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955403 38476251 38870760 + 102009674 AGCD01002591;AGCD01002592;AGCD01002593;AGCD01002594;AGCD01002595;AGCD01002596;AGCD01002597;AGCD01002598;AGCD01002599;AGCD01002600;AGCD01002601;AGCD01002602;AGCD01002603;AGCD01002604;AGCD01002605;AGCD01002606;AGCD01002607;AGCD01002608;AGCD01002609;GBCE01084916;XM_005373579;XM_005373580;XM_005373581 XP_005373636;XP_005373637;XP_005373638 MODEL 730468951 snorna SNORA27 Small nucleolar RNA SNORA27 8985733 protein-coding Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); identical protein binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN defense response to bacterium (ortholog); negative regulation of necroptotic process (ortholog); positive regulation of apoptotic process (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN LUBAC complex (ortholog) NW_004955597 272352 289348 + 102021192 AGCD01076553;AGCD01076554;GBBH01033064;XM_005414720;XM_005414721;XM_005414722 XP_005414777;XP_005414778;XP_005414779 MODEL 8724809 protein-coding Pou2af2 POU class 2 homeobox associating factor 2 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); transcription coactivator activity (ortholog); FOUND IN nucleus (ortholog) NW_004955412 13076854 13079095 + 102015300 AGCD01012827;AGCD01012828;GBCE01163326;XM_013511187 XP_013366641 MODEL 39133277 snrna U4 U4 spliceosomal RNA 9045802 protein-coding Ret ret proto-oncogene ENCODES a protein that exhibits calcium ion binding (ortholog); protein tyrosine kinase activity (ortholog); transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to retinoic acid (ortholog); embryonic epithelial tube formation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); appendicitis (ortholog); Brain Injuries (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); early endosome (ortholog) NW_004955546 1221995 1252147 + 102005303 AGCD01072043;AGCD01072044;GBDF01009147;XM_005411762 XP_005411819 MODEL 39133420 snorna SNORD22 Small nucleolar RNA SNORD22 8856312 protein-coding LOC102019719 OX-2 membrane glycoprotein-like NW_004955427 12648153 12658811 + 102019719 AGCD01027222;GBDK01037625;XM_005386612 XP_005386669 MODEL 8720105 ncrna LOC102020031 uncharacterized LOC102020031 NW_004955501 3463765 3466302 + 102020031 AGCD01064105;GBDF01189492;XR_264251 MODEL 8930943 protein-coding Pwp1 PWP1 homolog, endonuclein ENCODES a protein that exhibits histone H4K20me3 reader activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of stem cell differentiation (ortholog); positive regulation of transcription of nucleolar large rRNA by RNA polymerase I (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955405 41314978 41329988 + 102027711 AGCD01005546;AGCD01005547;GBDF01048521;XM_005374640 XP_005374697 MODEL 9049206 protein-coding Snrk SNF related kinase ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine kinase activity (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955420 27710536 27754682 - 102012099 AGCD01021458;AGCD01021459;GBBH01227690;GBDK01081580;XM_013513447;XM_013513448 XP_013368901;XP_013368902 MODEL 8750824 protein-coding Trim46 tripartite motif containing 46 INVOLVED IN anterograde synaptic vesicle transport (ortholog); axonogenesis (ortholog); microtubule bundle formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon initial segment (ortholog); main axon (ortholog); proximal neuron projection (ortholog) NW_004955545 1646244 1656825 + 102028020 AGCD01071864;GBDF01295696;XM_005411579;XM_005411581;XM_005411582;XM_005411583;XM_005411584 XP_005411636;XP_005411638;XP_005411639;XP_005411640;XP_005411641 MODEL 8706749 protein-coding Prpf8 pre-mRNA processing factor 8 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955481 1499634 1530670 + 102017981 AGCD01056833;AGCD01056834;GBDF01002836;XM_005402612 XP_005402669 MODEL 8893065 ncrna LOC102011940 uncharacterized LOC102011940 NW_004955403 54668718 54673281 + 102011940 AGCD01003101;GBDF01280593;XR_001234182;XR_001234183 MODEL 9012750 protein-coding Serpina5 serpin family A member 5 ENCODES a protein that exhibits acrosin binding (ortholog); phosphatidylcholine binding (ortholog); protease binding (ortholog); INVOLVED IN negative regulation of proteolysis (ortholog); seminal clot liquefaction (ortholog); seminal vesicle development (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH amphetamine abuse (ortholog); Arterial Occlusive Diseases (ortholog); Breast Cancer, Familial (ortholog); FOUND IN acrosomal membrane (ortholog); external side of plasma membrane (ortholog); extracellular exosome (ortholog) NW_004955438 17787398 17796013 - 102019959 AGCD01035451;GBDF01001290;XM_005390388 XP_005390445 MODEL 8890694 protein-coding Rprd1b regulation of nuclear pre-mRNA domain containing 1B ENCODES a protein that exhibits identical protein binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription preinitiation complex (ortholog) NW_004955445 18622018 18676243 - 102015900 AGCD01039906;GBDF01157717;XM_005392549;XM_005392550 XP_005392606;XP_005392607 MODEL 8836021 protein-coding LOC102006115 C-type lectin domain family 7 member A-like NW_004955413 7254513 7276098 - 102006115 AGCD01013806;AGCD01013807;AGCD01013808;GBBH01168364;XM_005378930 XP_005378987 MODEL 730469026 snorna SNORA43 Small nucleolar RNA SNORA43 8913397 protein-coding Sp2 Sp2 transcription factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN circulatory system development (ortholog); embryonic organ development (ortholog); fibroblast proliferation (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955451 13205463 13231181 - 102012492 AGCD01043460;AGCD01043461;AGCD01043462;GBDI01263587;XM_005394259;XM_005394260;XM_005394261 XP_005394316;XP_005394317;XP_005394318 MODEL 8713163 protein-coding LOC102004318 vomeronasal type-2 receptor 116-like NW_004955532 320637 360886 - 102004318 AGCD01070114;AGCD01070115;AGCD01070116;XM_013507576 XP_013363030 MODEL 8896549 protein-coding Tmbim1 transmembrane BAX inhibitor motif containing 1 ENCODES a protein that exhibits death receptor binding (ortholog); INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); negative regulation of Fas signaling pathway (ortholog); negative regulation of protein localization to plasma membrane (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endosome membrane (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955453 15083179 15100197 + 102013143 AGCD01044885;GBBH01032737;XM_005395657;XM_005395658;XM_013519935 XP_005395714;XP_005395715;XP_013375389 MODEL 9040848 protein-coding Lrp5 LDL receptor related protein 5 ENCODES a protein that exhibits coreceptor activity (ortholog); toxin transmembrane transporter activity (ortholog); Wnt receptor activity (ortholog); INVOLVED IN adipose tissue development (ortholog); amino acid transport (ortholog); anatomical structure regression (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; N-cadherin signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnoid Cysts (ortholog); autistic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955422 17394371 17475244 - 102004829 AGCD01022921;AGCD01022922;GBDK01238671;XM_013514225;XM_013514226 XP_013369679;XP_013369680 MODEL 8769994 protein-coding Plac1 placenta associated 1 INVOLVED IN placenta development (ortholog); spongiotrophoblast layer developmental growth (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955473 264265 415616 + 102023583 AGCD01053834;AGCD01053835;AGCD01053836;GBDF01249559;XM_005401198;XM_013523053 XP_005401255;XP_013378507 MODEL 8831437 protein-coding Erp44 endoplasmic reticulum protein 44 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); INVOLVED IN glycoprotein metabolic process (ortholog); protein folding (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955419 25584404 25665590 + 102013936 AGCD01020388;AGCD01020389;GBCQ01063714;XM_005382816 XP_005382873 MODEL 8955966 protein-coding Pprc1 PPARG related coactivator 1 ASSOCIATED WITH cervical cancer (ortholog); epilepsy (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955485 8200855 8217373 - 102021669 AGCD01058699;GBDF01223065;XM_005403859;XM_013504112;XM_013504113;XM_013504114;XM_013504115 XP_005403916;XP_013359566;XP_013359567;XP_013359568;XP_013359569 MODEL 8780981 protein-coding Psmg1 proteasome assembly chaperone 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); proteasome binding (ortholog); INVOLVED IN cerebellar granule cell precursor proliferation (ortholog); chaperone-mediated protein complex assembly (ortholog); proteasome core complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955407 37993657 38002986 - 102021520 AGCD01007792;GBDI01180160;XM_005375763;XM_005375764 XP_005375820;XP_005375821 MODEL 8934089 protein-coding LOC102013519 probable N-acetyltransferase CML1 NW_004955424 12047830 12049545 + 102013519 AGCD01024593;GBCQ01036376;XM_005385553 XP_005385610 MODEL 8810372 ncrna LOC102006489 uncharacterized LOC102006489 NW_004955432 19124642 19126210 + 102006489 AGCD01031169;GBDI01387174;XR_261535 MODEL 8723354 ncrna LOC102010324 uncharacterized LOC102010324 NW_004955403 1876109 1880828 - 102010324 AGCD01001726;GBCQ01179100;XR_259132 MODEL 39133531 snrna U4 U4 spliceosomal RNA 9010756 protein-coding Ring1 ring finger protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); ubiquitin-protein transferase activator activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); camera-type eye morphogenesis (ortholog); chromatin organization (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog); PcG protein complex (ortholog) NW_004955437 1782156 1785811 + 102029117 AGCD01034234;GBBH01001970;GBDK01002559;XM_005389478 XP_005389535 MODEL 151707876 snorna SNORD23 Small nucleolar RNA SNORD23 8886836 protein-coding Sh3pxd2b SH3 and PX domains 2B ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN adipose tissue development (ortholog); bone development (ortholog); cranial skeletal system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); angle-closure glaucoma (ortholog); Animal Disease Models (ortholog); FOUND IN cytoplasm (ortholog); podosome (ortholog) NW_004955408 25103278 25169934 - 102025876 AGCD01008630;GBCE01104618;XM_013509338 XP_013364792 MODEL 9044218 protein-coding St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 ENCODES a protein that exhibits beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminide alpha-2,3- sialyltransferase activity (ortholog); beta-galactoside (CMP) alpha-2,3-sialyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN ganglioside biosynthetic process (ortholog); globoside biosynthetic process (ortholog); glycolipid biosynthetic process (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955484 3176214 3230433 - 102003137 AGCD01058158;AGCD01058159;AGCD01058160;AGCD01058161;AGCD01058162;AGCD01058163;GBBH01163789;GBDJ01188327;XM_005403478 XP_005403535 MODEL 39131714 snorna SNORA71 Small nucleolar RNA SNORA71 8718094 protein-coding Slc4a11 solute carrier family 4 member 11 ENCODES a protein that exhibits bicarbonate transmembrane transporter activity (ortholog); borate efflux transmembrane transporter activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); borate transport (ortholog); cellular hypotonic response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); congenital hereditary endothelial dystrophy of cornea (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955415 14123021 14133437 - 102025571 AGCD01016288;GBCE01153106;GBDK01418034;XM_013512257 XP_013367711 MODEL 8782217 protein-coding Prph peripherin ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN intermediate filament cytoskeleton organization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN terminal bouton; axon (ortholog); C-fiber (ortholog) NW_004955500 8106371 8117221 + 102016172 AGCD01063978;AGCD01063979;AGCD01063980;GBCE01007281;XM_005406695 XP_005406752 MODEL 9013956 protein-coding Pmpca peptidase, mitochondrial processing subunit alpha ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN mitochondrial protein processing (ortholog); protein processing (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH Abnormal Reflexes (ortholog); autosomal recessive spinocerebellar ataxia 2 (ortholog); blindness (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial processing peptidase complex (ortholog) NW_004955513 4315159 4322609 - 102006379 AGCD01066925;GBDF01081940;XM_005408489;XM_013506655 XP_005408546;XP_013362109 MODEL 8806576 protein-coding LOC102012348 ankyrin repeat domain-containing protein 26-like NW_004955429 6598602 6603032 - 102012348 AGCD01028554;XM_013515351 XP_013370805 MODEL 8858267 protein-coding Wipi2 WD repeat domain, phosphoinositide interacting 2 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome maturation (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN autophagosome (ortholog); autophagosome membrane (ortholog); cytosol (ortholog) NW_004955460 10090343 10132724 + 102026612 AGCD01048572;AGCD01048573;GBDF01050079;XM_005397828;XM_005397829;XM_005397830;XM_005397831;XM_005397833;XM_013521133;XM_013521134 XP_005397885;XP_005397886;XP_005397887;XP_005397888;XP_005397890;XP_013376587;XP_013376588 MODEL 8948240 protein-coding LOC102016568 retinol dehydrogenase 7-like NW_004955458 4565869 4571429 - 102016568 AGCD01047418;XM_005397334 XP_005397391 MODEL 8798348 protein-coding LOC102009128 zinc finger protein 304 NW_004955584 189872 203610 + 102009128 AGCD01075926;GBDF01154035;XM_005414360 XP_005414417 MODEL 8959247 ncrna LOC102008363 uncharacterized LOC102008363 NW_004955449 1293468 1297009 + 102008363 AGCD01041795;GBDF01187862;XR_262482 MODEL 9031206 ncrna LOC102011091 uncharacterized LOC102011091 NW_004955409 10810505 10829604 + 102011091 AGCD01009485;GBDI01024783;XR_259768 MODEL 8717729 protein-coding Rnf25 ring finger protein 25 ENCODES a protein that exhibits NF-kappaB binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein K6-linked ubiquitination (ortholog); protein ubiquitination (ortholog); protein-RNA covalent cross-linking repair (ortholog); ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); nucleus (ortholog) NW_004955453 14753575 14761617 + 102005555 AGCD01044873;GBDF01084559;XM_005395628 XP_005395685 MODEL 8810968 protein-coding Rbfa ribosome binding factor A ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); rRNA binding (ortholog); INVOLVED IN mitochondrial small ribosomal subunit assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN methyltransferase complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955402 63213097 63224252 + 102028703 AGCD01001665;GBDF01126328;XM_005373124 XP_005373181 MODEL 8777166 protein-coding Cabp4 calcium binding protein 4 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN photoreceptor cell morphogenesis (ortholog); phototransduction (ortholog); retinal bipolar neuron differentiation (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH achromatopsia (ortholog); congenital stationary night blindness (ortholog); Congenital Stationary Night Blindness 2B (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); presynapse (ortholog) NW_004955422 18023639 18028845 - 102018613 AGCD01022935;GBBH01046929;XM_005384330 XP_005384387 MODEL 8763512 protein-coding Trpc6 transient receptor potential cation channel subfamily C member 6 ENCODES a protein that exhibits actin binding (ortholog); actinin binding (ortholog); ATPase binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to hypoxia (ortholog); negative regulation of dendrite morphogenesis (ortholog); PARTICIPATES IN endothelin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); Brain Hypoxia-Ischemia (ortholog); Cardiomegaly (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955412 4905039 5019678 - 102008513 AGCD01012608;AGCD01012609;AGCD01012610;AGCD01012611;AGCD01012612;GBCE01034660;GBDK01169350;XM_013511254 XP_013366708 MODEL 8764498 pseudo LOC102019720 60S acidic ribosomal protein P0 pseudogene NW_004955428 20054037 20055072 - 102019720 AGCD01028100 MODEL 8884434 protein-coding Retn resistin ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of feeding behavior (ortholog); positive regulation of progesterone secretion (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Albuminuria (ortholog); chronic kidney disease (ortholog); FOUND IN extracellular region (ortholog) NW_004955563 1607814 1609273 - 102028141 AGCD01074153;GBDK01016678;XM_005413172 XP_005413229 MODEL 9009383 pseudo LOC102003295 gonadotropin-releasing hormone receptor pseudogene NW_004955447 5170735 5171274 + 102003295 AGCD01040747;XM_005392953 MODEL 8993982 protein-coding LOC102008784 leukocyte immunoglobulin-like receptor subfamily A member 2 NW_004955567 1128512 1147473 + 102008784 AGCD01074460;GBDK01141152;XM_013509292;XM_013509293;XM_013509294;XM_013509295;XM_013509296;XM_013509297;XM_013509298;XM_013509299;XR_001232407 XP_013364746;XP_013364747;XP_013364748;XP_013364749;XP_013364750;XP_013364751;XP_013364752;XP_013364753 MODEL 8875456 protein-coding Pif1 PIF1 5'-to-3' DNA helicase ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); 5'-3' DNA/RNA helicase activity (ortholog); ATP binding (ortholog); INVOLVED IN negative regulation of telomere maintenance via telomerase (ortholog); protein-DNA-RNA complex disassembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955450 10722570 10729852 + 102009336 AGCD01042634;GBBH01043890;GBBH01043904;XM_005393887 XP_005393944 MODEL 8982864 pseudo LOC102006116 28S ribosomal protein S36, mitochondrial pseudogene NW_004955413 12416468 12416769 - 102006116 AGCD01013988 MODEL 9002152 ncrna LOC102004322 uncharacterized LOC102004322 NW_004955438 21001399 21004768 - 102004322 AGCD01035528;GBDJ01373094;XR_001235152 MODEL 8739986 protein-coding Sp3 Sp3 transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN B cell differentiation (ortholog); definitive hemopoiesis (ortholog); embryonic camera-type eye morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Facial Asymmetry (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-DNA complex (ortholog) NW_004955449 1347781 1404368 + 102008905 AGCD01041796;AGCD01041797;AGCD01041798;AGCD01041799;AGCD01041800;GBBH01098526;XM_005393193 XP_005393250 MODEL 730469112 snorna SNORA27 Small nucleolar RNA SNORA27 8858868 protein-coding LOC102022594 protein FAM24A-like NW_004955477 1070372 1097654 - 102022594 AGCD01055502;GBDF01046801;XM_005401947;XM_005401948;XM_005401949;XM_013503111;XM_013503112;XM_013503113 XP_005402004;XP_005402005;XP_005402006;XP_013358565;XP_013358566;XP_013358567 MODEL 8992318 ncrna LOC102005756 uncharacterized LOC102005756 NW_004955402 5429973 5443199 - 102005756 AGCD01000135;XR_001236384;XR_259029 MODEL 8730380 protein-coding Spon1 spondin 1 ENCODES a protein that exhibits LBD domain binding (ortholog); INVOLVED IN negative regulation of amyloid-beta formation (ortholog); positive regulation of amyloid precursor protein catabolic process (ortholog); positive regulation of protein processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955414 29180246 29475547 + 102022490 AGCD01015700;AGCD01015701;AGCD01015702;AGCD01015703;AGCD01015704;AGCD01015705;GBCE01077278;XM_005380330 XP_005380387 MODEL 8849045 protein-coding Leng8 leukocyte receptor cluster member 8 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955567 1539537 1552170 + 102012911 AGCD01074480;AGCD01074481;GBDJ01334723;XM_005413378;XM_005413379;XM_013509248 XP_005413435;XP_005413436;XP_013364702 MODEL 8836628 protein-coding Errfi1 ERBB receptor feedback inhibitor 1 ENCODES a protein that exhibits kinase binding (ortholog); protein kinase binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN apoptotic process (ortholog); bile acid biosynthetic process (ortholog); cartilage development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955486 4941143 4955693 + 102030200 AGCD01059072;AGCD01059073;GBCE01052630;XM_005404060 XP_005404117 MODEL 8871925 protein-coding Lrp6 LDL receptor related protein 6 ENCODES a protein that exhibits apolipoprotein binding (ortholog); coreceptor activity (ortholog); frizzled binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); axis elongation (ortholog); axis elongation involved in somitogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autosomal dominant polycystic kidney disease (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) NW_004955413 9080901 9237644 - 102014436 AGCD01013892;AGCD01013893;AGCD01013894;AGCD01013895;AGCD01013896;AGCD01013897;AGCD01013898;AGCD01013899;AGCD01013900;GBCB01110976;XM_005378957 XP_005379014 MODEL 10181322 ncrna LOC106147535 uncharacterized LOC106147535 NW_004955575 134469 142129 - 106147535 AGCD01075204;GBDK01096539;XR_001232459 MODEL 8973032 protein-coding Psmg2 proteasome assembly chaperone 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleus (ortholog); protein folding chaperone complex (ortholog) NW_004955402 857228 870940 - 102011162 AGCD01000035;AGCD01000036;GBBH01004200;GBCQ01042453;XM_013513426;XM_013513470 XP_013368880;XP_013368924 MODEL 8989355 protein-coding Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); helicase activity (ortholog); identical protein binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH ankyloglossia (ortholog); Arachnodactyly (ortholog); blepharitis (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955470 3828943 3856059 - 102016149 AGCD01052712;GBCQ01004600;XM_005400656 XP_005400713 MODEL 8901899 protein-coding Serpina6 serpin family A member 6 ENCODES a protein that exhibits molecular carrier activity (ortholog); steroid binding (ortholog); INVOLVED IN glucocorticoid metabolic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); clear cell renal cell carcinoma (ortholog); corticosteroid-binding globulin deficiency (ortholog); FOUND IN extracellular region (ortholog) NW_004955438 16356600 16380861 - 102014492 AGCD01035406;AGCD01035407;AGCD01035408;XM_013517149 XP_013372603 MODEL 730469027 snorna SNORA43 Small nucleolar RNA SNORA43 8990916 protein-coding Rprd2 regulation of nuclear pre-mRNA domain containing 2 ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN transcription preinitiation complex (ortholog) NW_004955413 321707 420626 - 102013709 AGCD01013458;AGCD01013459;AGCD01013460;AGCD01013461;AGCD01013462;AGCD01013463;AGCD01013464;AGCD01013465;GBBH01177037;GBCE01169088;XM_005378679;XM_005378680;XM_005378681 XP_005378736;XP_005378737;XP_005378738 MODEL 8722816 protein-coding Shc3 SHC adaptor protein 3 ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); INVOLVED IN learning or memory (ortholog); synaptic transmission, glutamatergic (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ependymomas (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955515 2858971 3016467 + 102017690 AGCD01067260;AGCD01067261;AGCD01067262;AGCD01067263;AGCD01067264;AGCD01067265;AGCD01067266;AGCD01067267;GBDI01163152;GBDI01244672;XM_005408881 XP_005408938 MODEL 8718319 protein-coding St3gal3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 ENCODES a protein that exhibits beta-galactoside (CMP) alpha-2,3-sialyltransferase activity (ortholog); INVOLVED IN ganglioside biosynthetic process (ortholog); glycoprotein biosynthetic process (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 12 (ortholog); Breast Cancer, Familial (ortholog); developmental and epileptic encephalopathy (ortholog) NW_004955537 3258076 3458742 + 102005081 AGCD01070953;AGCD01070954;AGCD01070955;AGCD01070956;AGCD01070957;AGCD01070958;AGCD01070959;GBBH01076952;XM_005410678;XM_005410679 XP_005410735;XP_005410736 MODEL 39133280 snrna U4 U4 spliceosomal RNA 9014804 protein-coding Rumy1 regulator of UNG2 and MKLN1 interacting yippee protein 1 INVOLVED IN positive regulation of apoptotic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955406 41788278 41801141 - 102017629 AGCD01006692;GBDF01115968;XM_005375387;XM_013523086 XP_005375444;XP_013378540 MODEL 8729280 protein-coding Tmbim4 transmembrane BAX inhibitor motif containing 4 INVOLVED IN locomotory behavior (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); Golgi stack (ortholog) NW_004955458 12795484 12818277 - 102023982 AGCD01047789;AGCD01047790;GBBH01032558;XM_005397452;XM_005397453 XP_005397509;XP_005397510 MODEL 8818004 ncrna LOC102013520 uncharacterized LOC102013520 NW_004955500 5962838 5972280 + 102013520 AGCD01063865;GBDF01213566;XR_264230 MODEL 9046725 pseudo LOC102011943 allograft inflammatory factor 1 pseudogene NW_004955404 28664142 28664895 + 102011943 AGCD01003957;XM_005374142 MODEL 8994864 pseudo LOC102006491 ferritin heavy chain-like NW_004955434 1171311 1191802 + 102006491 AGCD01032056;AGCD01032057 MODEL 8716160 protein-coding Trim47 tripartite motif containing 47 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); regulation of postsynapse assembly (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); esophageal cancer (ortholog); Experimental Neoplasms (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955506 6379088 6383671 + 102010607 AGCD01065416;GBDK01285018;XM_005407473 XP_005407530 MODEL 9061456 protein-coding LOC102010328 putative tripartite motif-containing protein 64C NW_004955790 9857 10650 + 102010328 AGCD01078353;XM_013510192 XP_013365646 MODEL 8936772 protein-coding Pwp2 PWP2 small subunit processome component INVOLVED IN ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955407 41256603 41269648 - 102029049 AGCD01007863;GBCE01009676;XM_005375872 XP_005375929 MODEL 8875871 protein-coding Rbfox1 RNA binding fox-1 homolog 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN neuromuscular process controlling balance (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); regulation of skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nuclear stress granule (ortholog) NW_004955442 10345261 10694602 - 102021179 AGCD01037701;AGCD01037702;AGCD01037703;AGCD01037704;AGCD01037705;AGCD01037706;AGCD01037707;AGCD01037708;GBCB01001044;XM_005391225;XM_005391226;XM_005391227;XM_005391228;XM_005391229;XM_005391230;XM_005391232;XM_005391233;XM_005391235;XM_005391236;XM_005391238;XM_013517915;XM_013517916;XM_013517917;XM_013517918;XM_013517919;XR_001235411 XP_005391282;XP_005391283;XP_005391284;XP_005391285;XP_005391286;XP_005391287;XP_005391289;XP_005391290;XP_005391292;XP_005391293;XP_005391295;XP_013373369;XP_013373370;XP_013373371;XP_013373372;XP_013373373 MODEL 9031341 ncrna LOC102018551 uncharacterized LOC102018551 NW_004955451 11692981 11705179 - 102018551 AGCD01043363;GBDF01220707;XR_001235941;XR_001235942;XR_262593 MODEL 8798107 protein-coding Rinl Ras and Rab interactor like ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN endocytosis (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); stomach cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); ruffle (ortholog) NW_004955468 644530 651686 + 102003642 AGCD01051719;GBDK01293890;XM_005399806;XM_005399807;XM_005399809;XM_005399810;XM_005399812;XM_013522413;XM_013522415;XM_013522416;XM_013522417 XP_005399863;XP_005399864;XP_005399866;XP_005399867;XP_005399869;XP_013377867;XP_013377869;XP_013377870;XP_013377871 MODEL 39131713 snorna SNORA71 Small nucleolar RNA SNORA71 9048541 protein-coding Sh3rf1 SH3 domain containing ring finger 1 ENCODES a protein that exhibits MAP kinase scaffold activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); neuron migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog) NW_004955403 36989509 37141188 + 102006972 AGCD01002558;AGCD01002559;AGCD01002560;AGCD01002561;AGCD01002562;GBDF01253018;GBDI01325736;XM_013513376 XP_013368830 MODEL 8944585 protein-coding Retreg1 reticulophagy regulator 1 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); INVOLVED IN autophagy (ortholog); collagen catabolic process (ortholog); endoplasmic reticulum organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Charcot-Marie-Tooth disease (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955426 5574207 5688236 - 102012106 AGCD01026130;AGCD01026131;AGCD01026132;AGCD01026133;AGCD01026134;AGCD01026135;AGCD01026136;AGCD01026137;AGCD01026138;GBCB01023016;XM_005386135;XM_005386136 XP_005386192;XP_005386193 MODEL 8951351 pseudo LOC102008786 coiled-coil domain-containing protein 152-like NW_004955569 1719680 1720876 - 102008786 AGCD01074678 MODEL 8967496 ncrna LOC102012357 uncharacterized LOC102012357 NW_004955436 8984095 9017211 + 102012357 AGCD01033755;GBDF01158995;XR_261779;XR_261780 MODEL 8767103 protein-coding Piga phosphatidylinositol glycan anchor biosynthesis class A INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive congenital ichthyosis 4B (ortholog); basal ganglia calcification (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (ortholog); rough endoplasmic reticulum membrane (ortholog) NW_004955519 2852605 2865848 + 102017375 AGCD01067942;GBCE01011293;XM_005409170;XM_013507014;XR_001231864 XP_005409227;XP_013362468 MODEL 8891788 protein-coding Prph2 peripherin 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN detection of light stimulus involved in visual perception (ortholog); photoreceptor cell outer segment organization (ortholog); protein heterooligomerization (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH Central Areolar Choroidal Dystrophy 2 (ortholog); choroidal sclerosis (ortholog); Choroideremia (ortholog); FOUND IN photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog) NW_004955437 8784211 8794789 - 102023632 AGCD01034497;AGCD01034498;GBBH01103789;XM_005389723 XP_005389780 MODEL 8975974 protein-coding Wiz WIZ zinc finger ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); histone methyltransferase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of nuclear cell cycle DNA replication (ortholog); protein stabilization (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 7810145 7834908 + 102005610 AGCD01062166;AGCD01062167;AGCD01062168;GBBH01165686;GBDI01322868;XM_013505122 XP_013360576 MODEL 8966592 protein-coding Pou2af3 POU class 2 homeobox associating factor 3 ENCODES a protein that exhibits DNA binding (ortholog); transcription coactivator activity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955412 13090206 13098642 + 102012297 AGCD01012829;GBBH01143846;GBCE01075437;XM_013511188 XP_013366642 MODEL 8868979 pseudo LOC102016570 claudin-10 pseudogene NW_004955409 29927961 29929012 - 102016570 AGCD01010283 MODEL 9038940 pseudo LOC102008374 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955452 16615403 16615951 + 102008374 AGCD01044520 MODEL 8728125 protein-coding LOC102007601 kallikrein-4-like NW_004955558 1612493 1615729 + 102007601 AGCD01073453;XM_005412748 XP_005412805 MODEL 8953536 protein-coding LOC102009133 vomeronasal type-1 receptor 4-like NW_004955603 230078 230680 + 102009133 AGCD01076823;XM_005414842 XP_005414899 MODEL 8947780 pseudo LOC102022595 zinc finger protein 606-like NW_004955416 31745756 31749064 - 102022595 AGCD01017769 MODEL 8968593 protein-coding Tmbim6 transmembrane BAX inhibitor motif containing 6 ENCODES a protein that exhibits endoribonuclease inhibitor activity (ortholog); enzyme binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to unfolded protein (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical squamous cell carcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955547 335344 358503 + 102006828 AGCD01072148;AGCD01072149;AGCD01072150;AGCD01072151;GBDF01007322;XM_005411845;XM_013508467 XP_005411902;XP_013363921 MODEL 8896877 protein-coding Plac8 placenta associated 8 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); defense response to bacterium (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Chlamydiaceae Infections (ortholog); Escherichia Coli Infections (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955474 6518459 6533251 + 102030066 AGCD01054481;GBBH01004306;XM_005401386 XP_005401443 MODEL 8864651 protein-coding Rnf26 ring finger protein 26 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN endosome organization (ortholog); negative regulation of defense response to virus (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955412 20415468 20418263 + 102005687 AGCD01013008;GBCB01043868;XM_005378331 XP_005378388 MODEL 39133532 snrna U4 U4 spliceosomal RNA 8955719 protein-coding Cabp5 calcium binding protein 5 ASSOCIATED WITH lung cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955609 212176 225415 + 102010011 AGCD01077054;GBDJ01292062;XM_005414924;XM_005414925;XM_005414926;XM_005414927 XP_005414981;XP_005414982;XP_005414983;XP_005414984 MODEL 10168021 ncrna LOC106147536 uncharacterized LOC106147536 NW_004955576 178644 183836 - 106147536 AGCD01075260;XR_001232461 MODEL 8731640 protein-coding Psmg3 proteasome assembly chaperone 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN protein folding chaperone complex (ortholog); protein-containing complex (ortholog) NW_004955460 9186205 9187942 - 102020889 AGCD01048541;GBDF01159629;XM_005397814;XM_013521205;XM_013521206 XP_005397871;XP_013376659;XP_013376660 MODEL 8920226 pseudo LOC102003297 MICOS complex subunit MIC27 pseudogene NW_004955449 412796 415575 + 102003297 AGCD01041765 MODEL 8711063 protein-coding Slc4a1ap solute carrier family 4 member 1 adaptor protein ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955469 9617238 9654972 + 102007215 AGCD01052510;AGCD01052511;GBDF01089096;XM_005400510;XM_005400511 XP_005400567;XP_005400568 MODEL 9014771 protein-coding Pmpcb peptidase, mitochondrial processing subunit beta ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN mitochondrial protein processing (ortholog); protein localization to mitochondrion (ortholog); protein processing (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Deglutition Disorders (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial processing peptidase complex (ortholog); mitochondrion (ortholog) NW_004955410 8304088 8317639 + 102016455 AGCD01010744;GBDK01229185;XM_005377228;XM_005377229 XP_005377285;XP_005377286 MODEL 8867073 ncrna LOC102006117 uncharacterized LOC102006117 NW_004955468 6251392 6252627 - 102006117 AGCD01051983;GBDF01085640;XR_263393 MODEL 39131417 protein-coding SP3 Sp3 transcription factor 8736223 pseudo LOC102004327 nuclear inhibitor of protein phosphatase 1 pseudogene NW_004955548 1082609 1083641 + 102004327 AGCD01072356 MODEL 8805733 protein-coding Shc4 SHC adaptor protein 4 ENCODES a protein that exhibits protein domain specific binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN apoptotic process (ortholog); positive regulation of cell population proliferation (ortholog); regulation of gene expression (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955409 5000209 5111352 + 102010874 AGCD01009306;AGCD01009307;GBDF01188743;XM_005376697 XP_005376754 MODEL 9057720 protein-coding LOC102005760 phosphatidylinositol-binding clathrin assembly protein-like NW_004955594 504817 535099 - 102005760 AGCD01076429;AGCD01076430;AGCD01076431;AGCD01076432;AGCD01076433;AGCD01076434;GBBH01019273;GBCB01101047;XM_005414676;XM_013510002;XM_013510003 XP_005414733;XP_013365456;XP_013365457 MODEL 8707675 ncrna LOC102003635 uncharacterized LOC102003635 NW_004955412 994166 1000278 + 102003635 AGCD01012505;GBDF01113084;XR_259960 MODEL 8953675 pseudo LOC102011094 ubiquitin-conjugating enzyme E2 D3-like NW_004955409 26283548 26284242 - 102011094 AGCD01010170 MODEL 8954233 protein-coding Ppt1 palmitoyl-protein thioesterase 1 ENCODES a protein that exhibits lysophosphatidic acid binding (ortholog); palmitoyl-(protein) hydrolase activity (ortholog); phospholipase A2 inhibitor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); associative learning (ortholog); brain development (ortholog); PARTICIPATES IN fatty acid elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) NW_004955452 17518345 17549112 - 102003937 AGCD01044558;AGCD01044559;GBDF01128197;XM_005395273;XM_013519551 XP_005395330;XP_013375005 MODEL 8930079 protein-coding Spon2 spondin 2 ENCODES a protein that exhibits antigen binding (ortholog); lipopolysaccharide binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell adhesion (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); Carotid Artery Injuries (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955514 598840 603390 - 102012117 AGCD01067016;GBCB01123188;XM_005408688 XP_005408745 MODEL 8746767 protein-coding Leng9 leukocyte receptor cluster member 9 ASSOCIATED WITH myoepithelioma (ortholog) NW_004955567 1551379 1558261 - 102027020 AGCD01074481;AGCD01074482;GBCE01142248;GBDJ01073632;XM_005413414 XP_005413471 MODEL 8716376 ncrna LOC102019721 uncharacterized LOC102019721 NW_004955429 21904557 21908894 - 102019721 AGCD01029013;GBDF01264646;XR_261379 MODEL 8810238 protein-coding Esco1 establishment of sister chromatid cohesion N-acetyltransferase 1 ENCODES a protein that exhibits acetyltransferase activity (ortholog); identical protein binding (ortholog); N-acetyltransferase activity (ortholog); INVOLVED IN regulation of DNA replication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleus (ortholog) NW_004955402 10207621 10257363 - 102027027 AGCD01000252;AGCD01000253;AGCD01000254;GBCQ01174846;XM_013520167;XM_013520204;XM_013520246;XR_001236265;XR_001236273;XR_001236282 XP_013375621;XP_013375658;XP_013375700 MODEL 8944017 ncrna LOC102011945 uncharacterized LOC102011945 NW_004955405 15509552 15549105 + 102011945 AGCD01004947;AGCD01004948;GBDF01052663;XR_259378;XR_259379 MODEL 8736702 pseudo LOC102006494 geranylgeranyl transferase type-2 subunit beta pseudogene NW_004955436 18078850 18082980 - 102006494 AGCD01033955 MODEL 9012915 protein-coding Lrp8 LDL receptor related protein 8 ENCODES a protein that exhibits amyloid-beta binding (ortholog); apolipoprotein binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN ammon gyrus development (ortholog); cellular response to cholesterol (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN axon (ortholog); caveola (ortholog); cell surface (ortholog) NW_004955464 5837002 5912178 + 102025556 AGCD01050015;GBDF01193162;GBDI01325997;XM_013521674;XM_013521675;XM_013521676;XM_013521677;XM_013521678;XM_013521679;XM_013521680;XM_013521681;XM_013521682;XM_013521683;XM_013521684;XM_013521685;XM_013521686 XP_013377128;XP_013377129;XP_013377130;XP_013377131;XP_013377132;XP_013377133;XP_013377134;XP_013377135;XP_013377136;XP_013377137;XP_013377138;XP_013377139;XP_013377140 MODEL 8812655 protein-coding LOC102009554 kallikrein-4-like NW_004955558 1976188 2013876 + 102009554 AGCD01073492;AGCD01073493;AGCD01073494;AGCD01073495;AGCD01073496;XM_013508850 XP_013364304 MODEL 8934610 protein-coding Snrnp25 small nuclear ribonucleoprotein U11/U12 subunit 25 ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955442 17098487 17101497 - 102009889 AGCD01037937;GBDF01163382;XM_005391683 XP_005391740 MODEL 730469031 snorna SNORA43 Small nucleolar RNA SNORA43 8726600 protein-coding Serpina7 serpin family A member 7 ENCODES a protein that exhibits hormone binding (ortholog); INVOLVED IN post-embryonic development (ortholog); response to corticosterone (ortholog); response to nutrient levels (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colorectal cancer (ortholog); diabetes mellitus (ortholog); FOUND IN extracellular region (ortholog) NW_004955548 2855377 2861946 - 102006287 AGCD01072411;GBDF01025901;XM_005412013 XP_005412070 MODEL 8715723 pseudo LOC102020057 T-complex protein 1 subunit gamma pseudogene NW_004955442 5409499 5411146 + 102020057 AGCD01037559;XR_262116 MODEL 8883199 protein-coding Rps10 ribosomal protein S10 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); tRNA binding (ortholog); INVOLVED IN ribosomal small subunit assembly (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 9 (ortholog); Liver Failure (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) NW_004955437 2600219 2604821 - 102017158 AGCD01034278;GBDF01003861;XM_005389525;XM_013516919 XP_005389582;XP_013372373 MODEL 8821776 ncrna LOC102006121 uncharacterized LOC102006121 NW_004955470 11481867 11487499 + 102006121 AGCD01052889;XR_263505 MODEL 9005360 protein-coding LOC102005034 cyclin-dependent kinase inhibitor 2A-like NW_004955472 12312045 12318961 + 102005034 AGCD01053794;GBBH01193886;XM_005401166 XP_005401223 MODEL 8819623 protein-coding Wls Wnt ligand secretion mediator ENCODES a protein that exhibits identical protein binding (ortholog); mu-type opioid receptor binding (ortholog); Wnt-protein binding (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); cementum mineralization (ortholog); exocrine pancreas development (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Zaki syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955423 23374401 23465308 + 102013625 AGCD01024005;GBDK01002213;XM_005385271 XP_005385328 MODEL 9010377 ncrna LOC102011095 uncharacterized LOC102011095 NW_004955463 784664 786273 + 102011095 AGCD01049497;GBDF01014364;XR_263139 MODEL 8885405 protein-coding Tmc1 transmembrane channel like 1 ENCODES a protein that exhibits calcium channel activity (ortholog); mechanosensitive monoatomic ion channel activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN auditory receptor cell development (ortholog); calcium ion transmembrane transport (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); autosomal dominant nonsyndromic deafness 36 (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog); stereocilium (ortholog) NW_004955434 398734 500378 - 102005838 AGCD01032028;AGCD01032029;GBDF01270208;XM_005388743 XP_005388800 MODEL 9047114 protein-coding Trim54 tripartite motif containing 54 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN microtubule associated complex (ortholog) NW_004955469 9258946 9277275 + 102026740 AGCD01052498;GBCB01004527;XM_005400479 XP_005400536 MODEL 8999461 protein-coding Rnf31 ring finger protein 31 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN CD40 signaling pathway (ortholog); defense response to bacterium (ortholog); negative regulation of necroptotic process (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955409 36240008 36252166 - 102010454 AGCD01010454;GBCE01007600;XM_005377040;XM_005377041 XP_005377097;XP_005377098 MODEL 8847499 pseudo LOC102018555 mesoderm induction early response protein 1-like NW_004955403 3675122 3683686 + 102018555 AGCD01001771 MODEL 8916375 protein-coding Rint1 RAD50 interactor 1 INVOLVED IN mitotic G2 DNA damage checkpoint signaling (ortholog); regulation of ER to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Acute Hepatitis (ortholog); anxiety disorder (ortholog); bipolar disorder (ortholog); FOUND IN Dsl1/NZR complex (ortholog); endoplasmic reticulum (ortholog) NW_004955410 10121322 10144748 + 102023124 AGCD01010792;GBDF01158170;XM_005377249;XM_013510527 XP_005377306;XP_013365981 MODEL 8844986 protein-coding Psmg4 proteasome assembly chaperone 4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN protein folding chaperone complex (ortholog); protein-containing complex (ortholog) NW_004955465 10007136 10014921 - 102014653 AGCD01050498;GBBH01140190;GBCE01097527;XM_005398894 XP_005398951 MODEL 8883217 protein-coding Sh3rf2 SH3 domain containing ring finger 2 ENCODES a protein that exhibits phosphatase binding (ortholog); protein phosphatase 1 binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of JNK cascade (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955415 8024984 8148970 - 102019057 AGCD01016063;AGCD01016064;AGCD01016065;GBCB01038742;XM_005380683;XM_005380684;XM_005380685 XP_005380740;XP_005380741;XP_005380742 MODEL 8804901 ncrna LOC102008788 uncharacterized LOC102008788 NW_004955446 7907980 7940327 - 102008788 AGCD01040132;AGCD01040133;GBBH01101806;XR_001235659;XR_001235660;XR_001235661;XR_001235662;XR_001235663;XR_262390 MODEL 8751758 pseudo LOC102012361 iron-sulfur cluster assembly 1 homolog, mitochondrial pseudogene NW_004955437 12049308 12050497 - 102012361 AGCD01034594 MODEL 9061320 protein-coding Rundc1 RUN domain containing 1 INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955451 16777348 16784876 + 102003510 AGCD01043706;AGCD01043707;GBCE01186563;GBDI01219560;XM_013519241 XP_013374695 MODEL 8924153 protein-coding Prps1 phosphoribosyl pyrophosphate synthetase 1 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); ATP binding (ortholog); INVOLVED IN 5-phosphoribose 1-diphosphate biosynthetic process (ortholog); AMP biosynthetic process (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arts syndrome (ortholog); aspiration pneumonia (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog); ribose phosphate diphosphokinase complex (ortholog) NW_004955490 8303775 8330713 - 102019073 AGCD01060279;AGCD01060280;GBBH01207860;XM_005404697 XP_005404754 MODEL 8899534 protein-coding Pou2f1 POU class 2 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN lens induction in camera-type eye (ortholog); liver regeneration (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN forkhead class A signaling pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog); transcription regulator complex (ortholog) NW_004955462 9545122 9710190 - 102024535 AGCD01049339;AGCD01049340;AGCD01049341;AGCD01049342;GBDJ01116013;XM_005398227;XM_005398228;XM_005398229;XM_005398232;XM_013521422 XP_005398284;XP_005398285;XP_005398286;XP_005398289;XP_013376876 MODEL 8822029 protein-coding Trpc7 transient receptor potential cation channel subfamily C member 7 ENCODES a protein that exhibits calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); manganese ion transport (ortholog); ASSOCIATED WITH lung cancer (ortholog); melanoma (ortholog); urinary bladder cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955408 31260767 31408852 - 102015178 AGCD01008824;GBDF01075659;XM_013507541 XP_013362995 MODEL 8939448 ncrna LOC102008377 uncharacterized LOC102008377 NW_004955406 39188080 39231357 + 102008377 AGCD01006621;AGCD01006622;AGCD01006623;GBBH01127399;XR_001236960;XR_001236961;XR_001236965;XR_259524 MODEL 9036121 ncrna LOC102013522 uncharacterized LOC102013522 NW_004955426 6475719 6492062 - 102013522 AGCD01026157;GBDF01145587;XR_261192 MODEL 8780648 protein-coding LOC102005763 tetratricopeptide repeat protein 30B NW_004955403 19246934 19250365 + 102005763 AGCD01002121;GBDF01044632;XM_005373400 XP_005373457 MODEL 8810400 ncrna LOC102007602 uncharacterized LOC102007602 NW_004955443 8592132 8720400 + 102007602 AGCD01038329;AGCD01038330;AGCD01038331;AGCD01038332;AGCD01038333;AGCD01038334;GBDI01032702;XR_262196;XR_262197 MODEL 8916616 pseudo LOC102009135 cyclin-G1 pseudogene NW_004955647 79945 80944 + 102009135 AGCD01077761 MODEL 8759972 protein-coding LOC102020035 OX-2 membrane glycoprotein-like NW_004955427 12675014 12701762 + 102020035 AGCD01027222;AGCD01027223;AGCD01027224;GBCE01075627;XM_013515211;XM_013515212 XP_013370665;XP_013370666 MODEL 39133533 snrna U4 U4 spliceosomal RNA 8774805 protein-coding Spop speckle type BTB/POZ protein ENCODES a protein that exhibits identical protein binding (ortholog); molecular function inhibitor activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH Abdominal Pain (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955451 11897642 11970269 + 102023968 AGCD01043369;AGCD01043370;GBDI01079176;XM_005394208 XP_005394265 MODEL 8960611 ncrna LOC102011946 uncharacterized LOC102011946 NW_004955452 12789670 12791076 - 102011946 AGCD01044366;GBDF01032085;XR_262681 MODEL 8837464 protein-coding Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 ENCODES a protein that exhibits acetyltransferase activity (ortholog); L-lysine N6-acetyltransferase activity, acting on acetyl phosphate as donor (ortholog); protein-lysine-acetyltransferase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); double-strand break repair (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH familial hypercholesterolemia (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); chromocenter (ortholog); chromosome (ortholog) NW_004955403 50306726 50328015 + 102008172 AGCD01002964;AGCD01002965;GBDF01190888;XM_005373754;XM_013514290 XP_005373811;XP_013369744 MODEL 8793884 protein-coding Rbfox2 RNA binding fox-1 homolog 2 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cardiac conduction (ortholog); cellular response to angiotensin (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); congenital heart disease (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 22034048 22288430 - 102008713 AGCD01014279;AGCD01014280;AGCD01014281;AGCD01014282;AGCD01014283;AGCD01014284;AGCD01014285;AGCD01014286;AGCD01014287;AGCD01014288;GBBH01172118;GBDJ01174673;XM_005379131;XM_005379139;XM_005379140;XM_005379141;XM_013511499;XM_013511500;XM_013511501;XM_013511502;XM_013511503;XM_013511504;XM_013511505 XP_005379188;XP_005379196;XP_005379197;XP_005379198;XP_013366953;XP_013366954;XP_013366955;XP_013366956;XP_013366957;XP_013366958;XP_013366959 MODEL 9015155 ncrna LOC102009555 uncharacterized LOC102009555 NW_004955443 5716273 5723524 + 102009555 AGCD01038243;GBDF01305708;XR_001235476;XR_262177 MODEL 9044235 ncrna LOC102003298 uncharacterized LOC102003298 NW_004955449 5422486 5428279 - 102003298 AGCD01041932;AGCD01041933;GBDF01075789;XR_262489 MODEL 9042078 protein-coding Retreg2 reticulophagy regulator family member 2 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); INVOLVED IN collagen catabolic process (ortholog); endoplasmic reticulum organization (ortholog); reticulophagy (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebrotendinous xanthomatosis (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955453 14258523 14263573 - 102021839 AGCD01044860;GBCQ01006315;XM_005395587 XP_005395644 MODEL 730469205 snorna SNORA43 Small nucleolar RNA SNORA43 8705741 protein-coding St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 ENCODES a protein that exhibits beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminide alpha-2,3- sialyltransferase activity (ortholog); beta-galactoside (CMP) alpha-2,3-sialyltransferase activity (ortholog); N-acetyllactosaminide alpha-2,3-sialyltransferase activity (ortholog); INVOLVED IN cognition (ortholog); glycolipid biosynthetic process (ortholog); glycoprotein biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); cervical cancer (ortholog) NW_004955412 27376270 27418770 + 102007098 AGCD01013236;AGCD01013237;AGCD01013238;GBBH01157473;XM_005378516;XM_005378517;XM_005378518;XM_005378519;XM_013511052;XM_013511053;XM_013511054 XP_005378573;XP_005378574;XP_005378575;XP_005378576;XP_013366506;XP_013366507;XP_013366508 MODEL 8892407 protein-coding Pigb phosphatidylinositol glycan anchor biosynthesis class B ENCODES a protein that exhibits dol-P-Man:Man(2)GlcN-acyl-PI alpha-1,2-mannosyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); developmental and epileptic encephalopathy 80 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955409 562575 577082 - 102020890 AGCD01009155;GBCE01000716;GBDI01179911;XM_013510265 XP_013365719 MODEL 8791210 protein-coding LOC102016571 cytochrome P450 2W1 ENCODES a protein that exhibits all-trans retinal binding (ortholog); all-trans-retinol binding (ortholog); retinoic acid 4-hydroxylase activity (ortholog); INVOLVED IN aflatoxin metabolic process (ortholog); phospholipid metabolic process (ortholog); retinoic acid catabolic process (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum lumen (ortholog); plasma membrane (ortholog) NW_004955460 8705068 8711266 + 102016571 AGCD01048531;GBDI01051075;XM_013521223 XP_013376677 MODEL 9037443 protein-coding Pms1 PMS1 homolog 1, mismatch repair system component ENCODES a protein that exhibits DNA endonuclease activity (ortholog); enzyme binding (ortholog); INVOLVED IN response to xenobiotic stimulus (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; mismatch repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN MutLbeta complex (ortholog); nucleus (ortholog) NW_004955403 9021488 9100442 - 102005433 AGCD01001900;AGCD01001901;GBDK01434121;XM_005373313;XM_013512339 XP_005373370;XP_013367793 MODEL 8799736 pseudo LOC102004331 N-formyl peptide receptor 2-like NW_004955558 710555 711378 - 102004331 AGCD01073385 MODEL 8969933 protein-coding Sp4 Sp4 transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN regulation of heart contraction (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); bipolar disorder (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955410 23955408 24015667 + 102004910 AGCD01011120;AGCD01011121;GBCB01019139;XM_005377368;XM_005377370 XP_005377425;XP_005377427 MODEL 8831642 pseudo LOC102022596 zinc finger protein 649 pseudogene NW_004955479 7209599 7211237 + 102022596 AGCD01056403 MODEL 8812891 protein-coding Plac8l1 PLAC8 like 1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955415 7990558 8024998 + 102018489 AGCD01016060;AGCD01016061;AGCD01016062;AGCD01016063;GBDF01304882;XM_005380681;XM_005380682 XP_005380738;XP_005380739 MODEL 8913195 ncrna LOC102003638 uncharacterized LOC102003638 NW_004955466 11978002 12017214 - 102003638 AGCD01051106;AGCD01051107;GBDI01272836;XR_001236797;XR_001236798;XR_001236799;XR_001236800;XR_001236801;XR_263316;XR_263317 MODEL 8863133 protein-coding Rundc3a RUN domain containing 3A INVOLVED IN cGMP metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955451 17348822 17352271 + 102006736 AGCD01043743;GBDF01014728;GBDK01247607;XM_013519260 XP_013374714 MODEL 8946261 protein-coding LOC102005035 ATP-binding cassette sub-family C member 11 NW_004955474 7090746 7169568 + 102005035 AGCD01054513;AGCD01054514;AGCD01054515;XM_013502712 XP_013358166 MODEL 8917479 protein-coding Ppt2 palmitoyl-protein thioesterase 2 ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); palmitoyl hydrolase activity (ortholog); thiolester hydrolase activity (ortholog); ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog) NW_004955437 609901 630004 + 102014945 AGCD01034151;AGCD01034152;GBDJ01278109;XM_005389433;XM_005389435;XM_005389436;XM_005389437 XP_005389490;XP_005389492;XP_005389493;XP_005389494 MODEL 8716014 protein-coding Cabp7 calcium binding protein 7 INVOLVED IN gene expression (ortholog); muscle contraction (ortholog); muscle tissue development (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN trans-Golgi network membrane (ortholog) NW_004955455 3977977 3981646 + 102004561 AGCD01045662;GBDI01161267;XM_005396566 XP_005396623 MODEL 8819832 protein-coding Leo1 LEO1 component of Paf1/RNA polymerase II complex INVOLVED IN endodermal cell fate commitment (ortholog); mRNA 3'-end processing (ortholog); negative regulation of myeloid cell differentiation (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955409 2711475 2727879 + 102022791 AGCD01009215;AGCD01009216;AGCD01009217;GBBH01139969;GBDI01082426;XM_013510286 XP_013365740 MODEL 8811114 pseudo LOC102006499 60S ribosomal protein L21 pseudogene NW_004955547 321133 321616 - 102006499 AGCD01072145;XR_264897 MODEL 8979304 pseudo LOC102013900 putative C-mannosyltransferase DPY19L2P2 NW_004955452 10407032 10408684 + 102013900 AGCD01044275 MODEL 8878724 protein-coding Ttc9c tetratricopeptide repeat domain 9C ASSOCIATED WITH Breast Cancer, Familial (ortholog); Prostatic Neoplasms (ortholog); thymoma (ortholog) NW_004955599 481717 488678 - 102010651 AGCD01076651;AGCD01076652;GBBH01141536;GBDF01278020;XM_013510052 XP_013365506 MODEL 9046476 protein-coding Lrpap1 LDL receptor related protein associated protein 1 ENCODES a protein that exhibits lipase binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); receptor antagonist activity (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); negative regulation of amyloid-beta clearance (ortholog); negative regulation of receptor internalization (ortholog); PARTICIPATES IN Hedgehog signaling pathway; Reelin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cell surface (ortholog); cis-Golgi network (ortholog); endoplasmic reticulum (ortholog) NW_004955514 2195228 2208258 - 102004961 AGCD01067075;GBCE01007107;XM_005408765 XP_005408822 MODEL 8902527 protein-coding Rnf32 ring finger protein 32 ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN aggresome (ortholog); cytosol (ortholog); endosome (ortholog) NW_004955491 9128998 9154082 + 102020574 AGCD01060624;AGCD01060625;GBDF01002485;XM_005404869;XM_005404870;XM_005404871;XM_005404873;XM_013504655;XM_013504656 XP_005404926;XP_005404927;XP_005404928;XP_005404930;XP_013360109;XP_013360110 MODEL 8877441 protein-coding Serpina9 serpin family A member 9 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955438 17862064 17875490 + 102020957 AGCD01035456;XM_013517148 XP_013372602 MODEL 8800130 protein-coding Psors1c2 psoriasis susceptibility 1 candidate 2 ASSOCIATED WITH cholangiocarcinoma (ortholog); multiple myeloma (ortholog) NW_004955583 975037 977944 - 102024627 AGCD01075875;GBDJ01298572;XM_005414333;XM_013509772;XM_013509773 XP_005414390;XP_013365226;XP_013365227 MODEL 8999565 ncrna LOC102013902 uncharacterized LOC102013902 NW_004955406 3835927 3838964 - 102013902 AGCD01005677;GBDF01177185;XR_259472 MODEL 8844752 protein-coding Sh3rf3 SH3 domain containing ring finger 3 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of JNK cascade (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955470 12446604 12615689 + 102006652 AGCD01052932;AGCD01052933;AGCD01052934;AGCD01052935;GBDF01142813;XM_005400847 XP_005400904 MODEL 8761432 protein-coding Shcbp1 SHC binding and spindle associated 1 ENCODES a protein that exhibits SH2 domain binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); regulation of neural precursor cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN midbody (ortholog); mitotic spindle (ortholog) NW_004955448 74969 141627 - 102013229 AGCD01041217;AGCD01041218;AGCD01041219;AGCD01041220;AGCD01041221;AGCD01041222;GBDF01086273;XM_005392972;XM_005392973;XM_013518688 XP_005393029;XP_005393030;XP_013374142 MODEL 8817190 pseudo LOC102006123 short/branched chain specific acyl-CoA dehydrogenase, mitochondrial pseudogene NW_004955415 14660369 14661840 - 102006123 AGCD01016304 MODEL 8998850 pseudo LOC102013523 heat shock protein HSP 90-alpha pseudogene NW_004955426 26341646 26343835 - 102013523 AGCD01026756 MODEL 8869129 protein-coding Pwwp2a PWWP domain containing 2A ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H3K36me3 reader activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); regulation of transcriptional start site selection at RNA polymerase II promoter (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955408 14007982 14051149 - 102023334 AGCD01008379;AGCD01008380;GBCE01142938;XM_005376254;XM_005376255;XM_013508900;XM_013508906;XM_013508913;XM_013508924;XR_001232337;XR_001232338;XR_001232339 XP_005376311;XP_005376312;XP_013364354;XP_013364360;XP_013364367;XP_013364378 MODEL 8945721 ncrna LOC102011096 uncharacterized LOC102011096 NW_004955463 13120267 13130733 + 102011096 AGCD01049861;GBBH01212613;XR_001236627 MODEL 8971443 ncrna LOC102004333 uncharacterized LOC102004333 NW_004955559 1812453 1815477 - 102004333 AGCD01073670;GBDK01430414;XR_265003 MODEL 8906302 protein-coding Wnk1 WNK lysine deficient protein kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); cellular hyperosmotic response (ortholog); cellular response to calcium ion (ortholog); PARTICIPATES IN Erk5 MAPK signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); GABA-ergic synapse (ortholog) NW_004955454 6228492 6358690 - 102007507 AGCD01045225;AGCD01045226;AGCD01045227;AGCD01045228;AGCD01045229;AGCD01045230;GBDI01065217;XM_005395988;XM_005395991;XM_005395992;XM_005395993;XM_005395994;XM_005395996;XM_005395997;XM_005395999;XM_005396003;XM_013520148;XM_013520149;XM_013520150;XM_013520151;XM_013520152;XM_013520153;XM_013520155;XM_013520156;XM_013520157 XP_005396045;XP_005396048;XP_005396049;XP_005396050;XP_005396051;XP_005396053;XP_005396054;XP_005396056;XP_005396060;XP_013375602;XP_013375603;XP_013375604;XP_013375605;XP_013375606;XP_013375607;XP_013375609;XP_013375610;XP_013375611 MODEL 8781223 ncrna LOC102007605 uncharacterized LOC102007605 NW_004955447 15774756 15787240 - 102007605 AGCD01041068;AGCD01041069;GBDF01126660;XR_001235716;XR_001235717 MODEL 8989933 pseudo LOC102009138 heterogeneous nuclear ribonucleoprotein M pseudogene NW_004955403 28891551 28908137 - 102009138 AGCD01002352 MODEL 8947583 protein-coding Tmc2 transmembrane channel like 2 ENCODES a protein that exhibits calcium channel activity (ortholog); mechanosensitive monoatomic ion channel activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); regulation of calcium ion transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cuticular plate (ortholog); stereocilium (ortholog); stereocilium tip (ortholog) NW_004955415 13545266 13626125 + 102015948 AGCD01016253;AGCD01016254;AGCD01016255;AGCD01016256;AGCD01016257;AGCD01016258;AGCD01016259;AGCD01016260;AGCD01016261;AGCD01016262;GBDI01335372;XM_005380756 XP_005380813 MODEL 8906653 protein-coding Sp5 Sp5 transcription factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); post-anal tail morphogenesis (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog) NW_004955449 4076872 4079887 - 102023758 AGCD01041874;GBDJ01193009;XM_005393244 XP_005393301 MODEL 8809165 pseudo LOC102011948 NF-kappa-B inhibitor-interacting Ras-like protein 1 NW_004955453 11424663 11425286 - 102011948 AGCD01044807 MODEL 8987121 ncrna LOC102018557 uncharacterized LOC102018557 NW_004955405 28168327 28173766 - 102018557 AGCD01005232;GBDF01303388;XR_259405 MODEL 8994061 protein-coding Rps11 ribosomal protein S11 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) NW_004955559 1354540 1356509 - 102013657 AGCD01073641;GBDK01369883;XM_005412870 XP_005412927 MODEL 8957178 pseudo LOC102008791 alpha-enolase pseudogene NW_004955447 16493351 16494703 + 102008791 AGCD01041088 MODEL 8966936 protein-coding Retreg3 reticulophagy regulator family member 3 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); INVOLVED IN collagen catabolic process (ortholog); endoplasmic reticulum organization (ortholog); endoplasmic reticulum tubular network organization (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network (ortholog) NW_004955451 16468845 16486773 - 102020406 AGCD01043679;AGCD01043680;GBBH01145983;XM_005394466 XP_005394523 MODEL 8818666 pseudo LOC102012364 protein angel homolog 2-like NW_004955439 11699313 11700945 - 102012364 AGCD01035919 MODEL 8891940 protein-coding LOC102004346 ADP/ATP translocase 3-like NW_004956002 67 3761 + 102004346 AGCD01078844;AGCD01078845;GBCC01015784;GBDJ01370059;XM_013510213 XP_013365667 MODEL 8970058 protein-coding LOC102008379 zinc finger protein 454 NW_004955408 1440967 1461815 - 102008379 AGCD01007959;GBBH01113383;XM_013507982;XM_013507985 XP_013363436;XP_013363439 MODEL 8733791 protein-coding Trpm1 transient receptor potential cation channel subfamily M member 1 ENCODES a protein that exhibits calcium channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN calcium ion import across plasma membrane (ortholog); cellular response to light stimulus (ortholog); G protein-coupled glutamate receptor signaling pathway (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1C (ortholog); Ependymomas (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) NW_004955416 29846374 29880922 - 102017234 AGCD01017668;XM_013512689 XP_013368143 MODEL 8769395 protein-coding Rps12 ribosomal protein S12 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) NW_004955436 13328496 13331321 + 102025721 AGCD01033856;GBDF01002625;XM_005389220 XP_005389277 MODEL 39133534 snrna U4 U4 spliceosomal RNA 8719673 protein-coding Slc4a2 solute carrier family 4 member 2 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); chloride:bicarbonate antiporter activity (ortholog); enzyme binding (ortholog); INVOLVED IN amelogenesis (ortholog); chloride transport (ortholog); digestive tract development (ortholog); ASSOCIATED WITH Alkalosis (ortholog); Autosomal Recessive Osteopetrosis 9 (ortholog); autosomal recessive polycystic kidney disease (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); membrane (ortholog) NW_004955491 5498472 5513389 + 102030539 AGCD01060485;GBDJ01004266;XM_005404810;XM_005404811;XM_013504586 XP_005404867;XP_005404868;XP_013360040 MODEL 8874954 pseudo LOC102020058 olfactory receptor 4L1-like NW_004955550 282002 282930 - 102020058 AGCD01072492 MODEL 8754840 protein-coding Esd esterase D ENCODES a protein that exhibits hydrolase activity, acting on ester bonds (ortholog); identical protein binding (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Hypoxia (ortholog); osteoarthritis (ortholog); FOUND IN cytosol (ortholog) NW_004955431 524491 551871 - 102010084 AGCD01029869;AGCD01029870;GBBH01065118;GBCB01022499;XM_013515897 XP_013371351 MODEL 8805546 pseudo LOC102003299 epidermal growth factor receptor substrate 15 pseudogene NW_004955449 17953369 17956566 + 102003299 AGCD01042278 MODEL 9016484 pseudo LOC102004334 zona pellucida sperm-binding protein 2 pseudogene NW_004955443 8434034 8436392 - 102004334 AGCD01038326 MODEL 8964818 protein-coding LOC102009139 phosphatidylcholine transfer protein-like NW_004955451 6915885 6945860 - 102009139 AGCD01043218;AGCD01043219;AGCD01043220;GBDK01010809;XM_013519061 XP_013374515 MODEL 10066966 pseudo LOC106147537 M-phase phosphoprotein 6 pseudogene NW_004955577 42956 43655 - 106147537 AGCD01075378 MODEL 8981221 protein-coding Rbfox3 RNA binding fox-1 homolog 3 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH brain infarction (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); neuronal cell body (ortholog); nucleoplasm (ortholog) NW_004955506 3243637 3646789 + 102024144 AGCD01065315;AGCD01065316;AGCD01065317;AGCD01065318;GBDK01028890;XM_005407339;XM_005407340;XM_005407342;XM_013506116;XM_013506117;XM_013506118 XP_005407396;XP_005407397;XP_005407399;XP_013361570;XP_013361571;XP_013361572 MODEL 8979584 protein-coding Ttf1 transcription termination factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); termination of RNA polymerase I transcription (ortholog); transcription by RNA polymerase I (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); congenital nongoitrous hypothyroidism 2 (ortholog); Ehlers-Danlos syndrome classic type 1 (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955513 1804690 1829705 - 102026901 AGCD01066863;AGCD01066864;GBBH01172105;XM_005408379;XM_013506712;XM_013506713;XR_001231751;XR_001231752;XR_001231753 XP_005408436;XP_013362166;XP_013362167 MODEL 8806302 protein-coding Lrpprc leucine rich pentatricopeptide repeat containing ENCODES a protein that exhibits actin filament binding (ortholog); beta-tubulin binding (ortholog); mRNA binding (ortholog); INVOLVED IN mitochondrial mRNA polyadenylation (ortholog); negative regulation of mitochondrial mRNA catabolic process (ortholog); negative regulation of mitochondrial RNA catabolic process (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN condensed nuclear chromosome (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) NW_004955441 11012910 11116965 - 102029009 AGCD01037100;GBCB01022369;XM_013517542 XP_013372996 MODEL 8801909 protein-coding Pou2f2 POU class 2 homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell maturation (ortholog); cellular response to virus (ortholog); mature B cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955555 759308 793500 + 102030245 AGCD01073048;AGCD01073049;GBDI01187600;XM_005412389;XM_005412390;XM_005412391;XM_005412392;XM_005412393;XM_013508765;XM_013508766;XM_013508768;XM_013508769;XM_013508770;XM_013508771;XM_013508772;XM_013508774;XM_013508775;XM_013508776 XP_005412446;XP_005412447;XP_005412448;XP_005412449;XP_005412450;XP_013364219;XP_013364220;XP_013364222;XP_013364223;XP_013364224;XP_013364225;XP_013364226;XP_013364228;XP_013364229;XP_013364230 MODEL 8706057 protein-coding LOC102016572 granzyme B-like NW_004955409 35563970 35566671 + 102016572 AGCD01010426;XM_005377174 XP_005377231 MODEL 8788331 ncrna LOC102005769 uncharacterized LOC102005769 NW_004955405 37792705 37803781 - 102005769 AGCD01005459;AGCD01005460;GBBH01012524;XR_259443 MODEL 8949009 ncrna LOC102022600 uncharacterized LOC102022600 NW_004955419 746130 748094 - 102022600 AGCD01019608;XR_260597 MODEL 8756951 protein-coding LOC102020039 vomeronasal type-1 receptor 90-like NW_004955429 12592332 12593376 + 102020039 AGCD01028725;XM_005387254 XP_005387311 MODEL 8935551 ncrna LOC102003639 uncharacterized LOC102003639 NW_004955467 6581757 6582473 - 102003639 AGCD01051417;GBDF01227082;XR_263345 MODEL 9032164 ncrna LOC102005036 uncharacterized LOC102005036 NW_004955416 8146068 8156513 + 102005036 AGCD01017033;AGCD01017034;GBCQ01153475;XR_001233315;XR_260366 MODEL 8997029 pseudo LOC102004350 protein artemis pseudogene NW_004955406 36605973 36608435 + 102004350 AGCD01006559 MODEL 8713337 pseudo LOC102011101 HAUS augmin-like complex subunit 6 pseudogene NW_004955467 12349080 12357812 + 102011101 AGCD01051631;XR_263364 MODEL 8996883 protein-coding Cabs1 calcium binding protein, spermatid associated 1 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Anaphylaxis (ortholog); Inflammation (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); mitochondrial inner membrane (ortholog) NW_004955447 2581173 2582481 - 102026487 AGCD01040548;GBDF01007154;XM_013518486 XP_013373940 MODEL 8907676 protein-coding Spopl speckle type BTB/POZ protein like ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of protein ubiquitination (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog) NW_004955440 5594970 5612677 + 102013549 AGCD01036277;GBCB01004850;XM_005390773;XM_005390774;XM_013517500;XM_013517501 XP_005390830;XP_005390831;XP_013372954;XP_013372955 MODEL 8963858 protein-coding Pptc7 protein phosphatase targeting COQ7 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of mitophagy (ortholog); positive regulation of ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955482 7445218 7484939 - 102004711 AGCD01057468;AGCD01057469;GBCB01043299;GBCE01016802;XM_013503656 XP_013359110 MODEL 9060024 ncrna LOC102009556 uncharacterized LOC102009556 NW_004955444 690141 694617 - 102009556 AGCD01038682;GBCE01026109;XR_262224;XR_262225 MODEL 8942190 protein-coding LOC102007606 prolactin-like NW_004955576 1119907 1125387 + 102007606 AGCD01075360;GBCQ01002340;XM_005413941 XP_005413998 MODEL 9016915 protein-coding Lep leptin ENCODES a protein that exhibits DNA binding (ortholog); hormone activity (ortholog); leptin receptor binding (ortholog); INVOLVED IN adipose tissue development (ortholog); adult feeding behavior (ortholog); angiogenesis (ortholog); PARTICIPATES IN altered energy homeostasis pathway; altered leptin system pathway; energy homeostasis pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); abdominal obesity-metabolic syndrome 1 (ortholog); acute pancreatitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955479 9266604 9276568 + 102025002 AGCD01056457;GBCB01004075;XM_005402367 XP_005402424 MODEL 8763667 protein-coding Sp6 Sp6 transcription factor INVOLVED IN epithelial to mesenchymal transition (ortholog); odontogenesis (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1K (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955451 13264537 13270104 + 102013239 AGCD01043463;AGCD01043464;GBDF01261731;XM_005394262 XP_005394319 MODEL 8945498 protein-coding Pigc phosphatidylinositol glycan anchor biosynthesis class C INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH glycosylphosphatidylinositol biosynthesis defect 16 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (ortholog) NW_004955406 12891187 12893935 - 102029040 AGCD01005928;GBCB01025746;XM_005374858 XP_005374915 MODEL 8990388 protein-coding St3gal5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ENCODES a protein that exhibits lactosylceramide alpha-2,3-sialyltransferase activity (ortholog); ASSOCIATED WITH Cognitive Dysfunction (ortholog); Constipation (ortholog); Developmental Disabilities (ortholog) NW_004955424 1692182 1729206 + 102024023 AGCD01024246;GBBH01140143;XM_005385412 XP_005385469 MODEL 9057401 protein-coding LOC102019722 vomeronasal type-1 receptor 90-like NW_004955429 12528002 12528931 + 102019722 AGCD01028725;XM_005387253 XP_005387310 MODEL 8816075 protein-coding Serpinb1 serpin family B member 1 ENCODES a protein that exhibits peptidase inhibitor activity (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN cellular homeostasis (ortholog); inflammatory response (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytolytic granule (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955465 10541562 10551417 + 102025988 AGCD01050510;GBDI01218214;XM_005398929 XP_005398986 MODEL 8818807 ncrna LOC102018561 uncharacterized LOC102018561 NW_004955406 37905165 37930172 - 102018561 AGCD01006580;GBDF01063968;XR_001236867 MODEL 8700617 pseudo LOC102013904 zinc finger protein OZF-like NW_004955406 41519064 41522379 + 102013904 AGCD01006685 MODEL 9043837 ncrna LOC102012371 uncharacterized LOC102012371 NW_004955443 10531041 10537221 - 102012371 AGCD01038378;GBBH01158501;XR_001235449 MODEL 8916424 protein-coding Shcbp1l SHC binding and spindle associated 1 like INVOLVED IN positive regulation of chromosome organization (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH melanoma (ortholog); prostate cancer (ortholog); stomach cancer (ortholog); FOUND IN meiotic spindle (ortholog) NW_004955406 21754461 21785156 - 102024425 AGCD01006142;AGCD01006143;GBDF01008400;XM_013521488 XP_013376942 MODEL 8978372 protein-coding Sh3tc1 SH3 domain and tetratricopeptide repeats 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955514 2752499 2786067 - 102010399 AGCD01067087;AGCD01067088;GBCE01069521;XM_005408779;XM_013506767;XM_013506768;XM_013506769;XM_013506770 XP_005408836;XP_013362221;XP_013362222;XP_013362223;XP_013362224 MODEL 8843304 protein-coding Trim55 tripartite motif containing 55 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN diapedesis (ortholog); macrophage migration (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955444 12992362 13034621 - 102018137 AGCD01039088;GBCB01022555;XM_005392155;XM_005392156;XM_005392157;XM_005392158 XP_005392212;XP_005392213;XP_005392214;XP_005392215 MODEL 8810204 protein-coding Rundc3b RUN domain containing 3B ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955432 5032468 5186402 + 102026143 AGCD01030755;AGCD01030756;AGCD01030757;AGCD01030758;AGCD01030759;AGCD01030760;AGCD01030761;AGCD01030762;AGCD01030763;AGCD01030764;AGCD01030765;AGCD01030766;AGCD01030767;GBDF01251872;XM_013515918 XP_013371372 MODEL 8799786 ncrna LOC102006507 uncharacterized LOC102006507 NW_004955445 17401781 17432794 - 102006507 AGCD01039886;AGCD01039887;AGCD01039888;GBDF01208938;XR_262343;XR_262344 MODEL 8949061 protein-coding Prps1l1 phosphoribosyl pyrophosphate synthetase 1 like 1 INVOLVED IN male gonad development (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway NW_004955410 20987289 20988852 - 102024983 AGCD01011054;GBDF01044095;XM_005377343 XP_005377400 MODEL 9059749 protein-coding Riok1 RIO kinase 1 ENCODES a protein that exhibits protein serine kinase activity (ortholog); INVOLVED IN maturation of SSU-rRNA (ortholog); positive regulation of rRNA processing (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); methylosome (ortholog) NW_004955465 6487078 6506108 - 102028729 AGCD01050443;GBDF01084760;XM_005398856 XP_005398913 MODEL 8939842 protein-coding Tmc3 transmembrane channel like 3 ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955416 12005190 12040095 - 102025573 AGCD01017196;GBDF01054711;XM_005381451;XM_013512572;XM_013512573 XP_005381508;XP_013368026;XP_013368027 MODEL 8959158 protein-coding Pspc1 paraspeckle component 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); membraneless organelle assembly (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nuclear matrix (ortholog) NW_004955497 574678 641885 - 102006258 AGCD01062423;AGCD01062424;AGCD01062425;AGCD01062426;GBCQ01068863;GBDF01053680;XM_005406291 XP_005406348 MODEL 8978280 protein-coding Riok2 RIO kinase 2 ENCODES a protein that exhibits protein serine kinase activity (ortholog); INVOLVED IN maturation of SSU-rRNA (ortholog); positive regulation of ribosomal small subunit export from nucleus (ortholog); positive regulation of rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); preribosome, small subunit precursor (ortholog) NW_004955418 15487248 15509490 + 102007996 AGCD01019106;GBDI01215559;XM_005382217;XM_005382219 XP_005382274;XP_005382276 MODEL 39131499 protein-coding PLAC9 placenta associated 9 8946419 protein-coding LOC102009144 complement receptor type 1 NW_004955406 42927757 42997196 + 102009144 AGCD01006720;AGCD01006721;AGCD01006722;AGCD01006723;GBBH01063618;GBCE01049944;XM_013503302 XP_013358756 MODEL 8816438 pseudo LOC102006124 motile sperm domain-containing protein 1 pseudogene NW_004955476 50263 52111 + 102006124 AGCD01055190 MODEL 8965069 protein-coding Rbis ribosomal biogenesis factor INVOLVED IN ribosome biogenesis (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955417 3155852 3162925 - 102003236 AGCD01017905;GBCC01008391;XM_005381739 XP_005381796 MODEL 8813441 ncrna LOC102008387 uncharacterized LOC102008387 NW_004955410 24882847 24896816 + 102008387 AGCD01011136;GBDK01431851;XR_001232709 MODEL 8850588 protein-coding LOC102005770 endothelin-converting enzyme-like 1 NW_004955453 3471402 3489839 + 102005770 AGCD01044659;AGCD01044660;AGCD01044661;GBBH01082477;GBDJ01085717;XM_013519999;XM_013520000 XP_013375453;XP_013375454 MODEL 9012176 protein-coding Pwwp2b PWWP domain containing 2B ENCODES a protein that exhibits NuRD complex binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955477 10017449 10039691 + 102025789 AGCD01055689;GBDK01282478;XM_005402045;XM_005402046;XM_013503080 XP_005402102;XP_005402103;XP_013358534 MODEL 8726896 protein-coding LOC102020043 MICAL-like protein 1 NW_004955517 2041415 2043518 - 102020043 AGCD01067614;GBBH01168608;XM_005409030 XP_005409087 MODEL 9059236 protein-coding Rps13 ribosomal protein S13 ENCODES a protein that exhibits 5.8S rRNA binding (ortholog); mRNA 5'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN negative regulation of RNA splicing (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) NW_004955414 31887626 31890439 - 102007651 AGCD01015764;GBDF01006472;XM_005380375 XP_005380432 MODEL 39133535 snrna U4 U4 spliceosomal RNA 8976105 ncrna LOC102011951 uncharacterized LOC102011951 NW_004955455 571092 575802 - 102011951 AGCD01045562;XR_262804;XR_262805 MODEL 8991423 pseudo LOC102005039 R-spondin-3 pseudogene NW_004955479 254149 254962 + 102005039 AGCD01056180 MODEL 8915909 protein-coding LOC102003647 olfactory receptor 51G2-like NW_004955414 20928805 20929740 - 102003647 AGCD01015395;XM_005380487 XP_005380544 MODEL 8784573 protein-coding Rnf34 ring finger protein 34 ENCODES a protein that exhibits p53 binding (ortholog); phosphatidylinositol phosphate binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to cold (ortholog); negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); negative regulation of signal transduction by p53 class mediator (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); endomembrane system (ortholog); GABA-ergic synapse (ortholog) NW_004955482 6889112 6905139 - 102017126 AGCD01057424;AGCD01057425;GBCB01035353;XM_005403130;XR_263846 XP_005403187 MODEL 8859869 protein-coding Trim56 tripartite motif containing 56 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); defense response to virus (ortholog); host-mediated suppression of symbiont invasion (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955456 16181890 16185598 - 102028268 AGCD01046693;GBBH01228287;XM_005396871;XM_013520643 XP_005396928;XP_013376097 MODEL 8749942 protein-coding Pms2 PMS1 homolog 2, mismatch repair system component ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA binding (ortholog); MutSalpha complex binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); meiotic mismatch repair (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; mismatch repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); autistic disorder (ortholog); FOUND IN MutLalpha complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955460 13762854 13791462 + 102023443 AGCD01048722;AGCD01048723;GBDF01225942;XM_005397895;XM_013521160 XP_005397952;XP_013376614 MODEL 8799605 protein-coding Slc4a3 solute carrier family 4 member 3 ENCODES a protein that exhibits bicarbonate transmembrane transporter activity (ortholog); chloride:bicarbonate antiporter activity (ortholog); enzyme binding (ortholog); INVOLVED IN bicarbonate transport (ortholog); cardiac conduction (ortholog); pH reduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); cardiomyopathy (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955453 13846444 13859707 - 102028157 AGCD01044854;GBCE01154397;XM_005395505;XM_005395506;XM_005395507;XM_013519939;XM_013519940 XP_005395562;XP_005395563;XP_005395564;XP_013375393;XP_013375394 MODEL 8819520 pseudo LOC102009561 transcription elongation regulator 1 pseudogene NW_004955402 134030 135953 + 102009561 AGCD01000008 MODEL 8842062 ncrna LOC102003300 uncharacterized LOC102003300 NW_004955588 694209 720110 + 102003300 AGCD01076118;AGCD01076119;GBDF01073805;XR_001232529;XR_265119 MODEL 8805688 protein-coding Cabyr calcium binding tyrosine phosphorylation regulated ENCODES a protein that exhibits calcium ion binding (ortholog); enzyme binding (ortholog); protein domain specific binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Colorectal Neoplasms (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); motile cilium (ortholog) NW_004955402 12508524 12529230 + 102008364 AGCD01000391;GBDF01002956;XM_005372711;XM_005372713;XM_005372714;XM_013504625;XM_013504661 XP_005372768;XP_005372770;XP_005372771;XP_013360079;XP_013360115 MODEL 10189786 protein-coding LOC106147538 protein FAM71B-like NW_004955577 161735 162224 + 106147538 AGCD01075382;GBBH01162002;XM_013509615 XP_013365069 MODEL 8950651 pseudo LOC102008792 F-box/LRR-repeat protein 20 pseudogene NW_004955447 14849540 14851022 - 102008792 AGCD01041022 MODEL 8843356 protein-coding Ppwd1 peptidylprolyl isomerase domain and WD repeat containing 1 ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear body (ortholog); spliceosomal complex (ortholog) NW_004955446 3511152 3531584 - 102020298 AGCD01040022;GBDJ01017167;XM_005392628;XM_013518411;XM_013518412 XP_005392685;XP_013373865;XP_013373866 MODEL 8958557 ncrna LOC102013525 uncharacterized LOC102013525 NW_004955505 4680056 4680662 + 102013525 AGCD01065126;GBDF01224478;XR_264309 MODEL 8750208 protein-coding Ttf2 transcription termination factor 2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955435 20168842 20207999 + 102006160 AGCD01033447;GBBH01057701;XM_005389052 XP_005389109 MODEL 8819228 protein-coding Lrr1 leucine rich repeat protein 1 ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); nucleus (ortholog) NW_004955409 13039029 13048038 - 102003097 AGCD01009587;GBDF01305385;XM_005376844;XM_005376845;XM_005376846 XP_005376901;XP_005376902;XP_005376903 MODEL 8998604 protein-coding Retsat retinol saturase ENCODES a protein that exhibits all-trans-retinol 13,14-reductase activity (ortholog); INVOLVED IN retinoid metabolic process (ortholog); retinol metabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog); nuclear outer membrane (ortholog) NW_004955424 2107602 2122029 + 102004946 AGCD01024262;AGCD01024263;GBDF01226131;XM_005385436 XP_005385493 MODEL 8891761 pseudo LOC102022603 liver carboxylesterase 2-like NW_004955484 9789580 9816841 - 102022603 AGCD01058431;AGCD01058432 MODEL 8709420 ncrna LOC102016575 uncharacterized LOC102016575 NW_004955467 1729810 1730372 + 102016575 AGCD01051282;GBCE01002421;XR_263330 MODEL 8959917 protein-coding Pou2f3 POU class 2 homeobox 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cell differentiation (ortholog); epidermis development (ortholog); keratinocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955412 21261389 21339602 + 102010884 AGCD01013020;AGCD01013021;GBCE01142334;XM_005378347;XM_013511247 XP_005378404;XP_013366701 MODEL 8808089 protein-coding Wnk2 WNK lysine deficient protein kinase 2 INVOLVED IN monoatomic ion homeostasis (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955515 4730647 4852920 - 102010615 AGCD01067330;AGCD01067331;GBCB01002306;GBDK01219428;XM_013506886 XP_013362340 MODEL 8870031 protein-coding Serpinb11 serpin family B member 11 ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955402 47564631 47585486 + 102025638 AGCD01001191;GBBH01001457;XM_005373034 XP_005373091 MODEL 8873342 protein-coding Trpm2 transient receptor potential cation channel subfamily M member 2 ENCODES a protein that exhibits ADP-ribose diphosphatase activity (ortholog); calcium ion binding (ortholog); hydrolase activity (ortholog); INVOLVED IN calcium ion import across plasma membrane (ortholog); calcium ion transmembrane import into cytosol (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog); lysosomal membrane (ortholog) NW_004955407 41062217 41110500 - 102025656 AGCD01007854;AGCD01007855;GBBH01060494;GBBH01060499;XM_005375860;XM_005375861;XM_013505319;XM_013505324;XM_013505330;XM_013505335 XP_005375917;XP_005375918;XP_013360773;XP_013360778;XP_013360784;XP_013360789 MODEL 9060971 ncrna LOC102020059 uncharacterized LOC102020059 NW_004955442 10191797 10207230 - 102020059 AGCD01037700;GBCB01061306;XR_262130 MODEL 8901131 protein-coding Runx1 RUNX family transcription factor 1 PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); asthma (ortholog) NW_004955407 34108653 34342657 - 102029935 AGCD01007717;AGCD01007718;AGCD01007719;AGCD01007720;GBBH01187973;XM_005375708;XM_005375710 XP_005375765;XP_005375767 MODEL 8750915 pseudo LOC102004336 olfactory receptor 7G1-like NW_004955563 207086 223744 + 102004336 AGCD01074053 MODEL 8817279 protein-coding Spout1 SPOUT domain containing methyltransferase 1 ENCODES a protein that exhibits methyltransferase activity (ortholog); miRNA binding (ortholog); RNA methyltransferase activity (ortholog); INVOLVED IN maintenance of centrosome location (ortholog); miRNA processing (ortholog); post-transcriptional regulation of gene expression (ortholog); ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH POOR GROWTH, SEIZURES, AND BRAIN ABNORMALITIES (ortholog); FOUND IN kinetochore (ortholog); mitotic spindle (ortholog); spindle pole centrosome (ortholog) NW_004955570 1202987 1211052 - 102009666 AGCD01074799;GBCB01075115;XM_005413588 XP_005413645 MODEL 8839483 protein-coding Prps2 phosphoribosyl pyrophosphate synthetase 2 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); ATP binding (ortholog); INVOLVED IN 5-phosphoribose 1-diphosphate biosynthetic process (ortholog); AMP biosynthetic process (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog); ribose phosphate diphosphokinase complex (ortholog) NW_004955544 480587 512019 - 102030240 AGCD01071705;AGCD01071706;GBCE01044643;XM_005411376 XP_005411433 MODEL 8916945 protein-coding Lepr leptin receptor ENCODES a protein that exhibits identical protein binding (ortholog); leptin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN angiogenesis (ortholog); bone growth (ortholog); cell surface receptor signaling pathway via STAT (ortholog); PARTICIPATES IN altered energy homeostasis pathway; altered leptin system pathway; energy homeostasis pathway; ASSOCIATED WITH Albuminuria (ortholog); Animal Disease Models (ortholog); arteriosclerosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955423 25108897 25185315 - 102022716 AGCD01024052;AGCD01024053;AGCD01024054;AGCD01024055;AGCD01024056;GBCB01086455;XM_005385299;XM_005385300 XP_005385356;XP_005385357 MODEL 8716732 protein-coding Pigf phosphatidylinositol glycan anchor biosynthesis class F INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ONYCHODYSTROPHY, OSTEODYSTROPHY, IMPAIRED INTELLECTUAL DEVELOPMENT, AND SEIZURES SYNDROME (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955441 13492334 13525581 - 102012131 AGCD01037151;GBDF01043189;XM_005390976;XM_005390977;XR_262076 XP_005391033;XP_005391034 MODEL 8829933 protein-coding St3gal6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 ENCODES a protein that exhibits N-acetyllactosaminide alpha-2,3-sialyltransferase activity (ortholog); INVOLVED IN cellular response to interleukin-6 (ortholog); glycolipid biosynthetic process (ortholog); glycoprotein biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955427 397870 450187 + 102013314 AGCD01026833;AGCD01026834;GBBH01132102;GBCQ01116419;XM_013515120 XP_013370574 MODEL 8924647 pseudo LOC102018563 tubulin alpha-1 chain-like NW_004955406 11720895 11730389 + 102018563 AGCD01005894;XM_005375458 MODEL 8746931 ncrna LOC102009563 uncharacterized LOC102009563 NW_004955403 20142634 20146416 - 102009563 AGCD01002154;XR_259188 MODEL 8728972 pseudo LOC102012373 ubiquitin-conjugating enzyme E2 Q1 pseudogene NW_004955444 9094091 9096386 + 102012373 AGCD01038958 MODEL 8959329 protein-coding LOC102013908 interferon-inducible GTPase 1-like NW_004955408 2319577 2332098 - 102013908 AGCD01008004;AGCD01008005;AGCD01008006;GBDK01196295;XM_005376045;XM_013508135 XP_005376102;XP_013363589 MODEL 9062219 pseudo LOC102009153 stereocilin-like NW_004955409 22950828 22960330 - 102009153 AGCD01010048;AGCD01010049 MODEL 8823933 pseudo LOC102007607 ubiquitin-fold modifier 1 pseudogene NW_004955583 28661 29029 - 102007607 AGCD01075791 MODEL 8833569 protein-coding Pwwp3a PWWP domain containing 3A, DNA repair factor ENCODES a protein that exhibits nucleosome binding (ortholog); INVOLVED IN chromatin organization (ortholog); DNA repair (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 6552305 6574191 - 102005817 AGCD01062085;GBCB01060538;XM_013505292 XP_013360746 MODEL 8792571 protein-coding Sp7 Sp7 transcription factor ENCODES a protein that exhibits DEAD/H-box RNA helicase binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to parathyroid hormone stimulus (ortholog); cellular response to zinc ion starvation (ortholog); cementum mineralization (ortholog); ASSOCIATED WITH aortic valve stenosis (ortholog); osteogenesis imperfecta (ortholog); osteogenesis imperfecta type 12 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955458 583981 602856 - 102019671 AGCD01047137;AGCD01047138;AGCD01047139;AGCD01047140;GBBH01190592;XM_005397173;XM_005397174;XM_005397175;XM_013520954 XP_005397230;XP_005397231;XP_005397232;XP_013376408 MODEL 8847220 protein-coding Tmc4 transmembrane channel like 4 ENCODES a protein that exhibits voltage-gated chloride channel activity (ortholog); INVOLVED IN sensory perception of salty taste (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955604 99214 106409 + 102013673 AGCD01076862;GBDJ01002061;XM_005414858 XP_005414915 MODEL 8918761 ncrna LOC102003654 uncharacterized LOC102003654 NW_004955417 11249264 11260937 - 102003654 AGCD01018126;AGCD01018127;GBBH01160626;XR_260474 MODEL 8991392 protein-coding Esf1 ESF1 nucleolar pre-rRNA processing protein ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955415 23156521 23221027 - 102003229 AGCD01016551;AGCD01016552;GBCQ01150807;XM_005380886 XP_005380943 MODEL 8915945 ncrna LOC102005041 uncharacterized LOC102005041 NW_004955417 3384305 3386148 + 102005041 AGCD01017913;GBDF01093683;XR_260458 MODEL 8723578 pseudo LOC102019723 40S ribosomal protein S2 pseudogene NW_004955430 2621172 2623152 + 102019723 AGCD01029168;XR_261413 MODEL 8700566 protein-coding Rnf38 ring finger protein 38 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN male gonad development (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); sperm flagellum (ortholog) NW_004955419 29903917 30063705 + 102012435 AGCD01020515;AGCD01020516;AGCD01020517;AGCD01020518;AGCD01020519;AGCD01020520;AGCD01020521;AGCD01020522;AGCD01020523;GBDF01054162;XM_005382901;XM_005382902;XM_005382903;XM_005382904;XM_005382905;XM_005382906;XM_005382907;XM_005382908;XM_005382909;XM_005382910;XM_005382911;XM_005382912 XP_005382958;XP_005382959;XP_005382960;XP_005382961;XP_005382962;XP_005382963;XP_005382964;XP_005382965;XP_005382966;XP_005382967;XP_005382968;XP_005382969 MODEL 9003977 protein-coding LOC102013527 olfactory receptor 5AK2-like NW_004955511 2117904 2118839 + 102013527 AGCD01066392;XM_005407984 XP_005408041 MODEL 9029502 protein-coding Plac9 placenta associated 9 ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955437 13100613 13113555 + 102015764 AGCD01034646;GBDJ01176640;XM_005389884;XM_013517119;XM_013517120;XM_013517121 XP_005389941;XP_013372573;XP_013372574;XP_013372575 MODEL 8818132 pseudo LOC102018568 tripartite motif-containing protein 44 pseudogene NW_004955407 42667907 42670883 + 102018568 AGCD01007895 MODEL 9057699 protein-coding Riok3 RIO kinase 3 ENCODES a protein that exhibits caspase binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to dsDNA (ortholog); cellular response to dsRNA (ortholog); cellular response to virus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytosolic ribosome (ortholog); preribosome, small subunit precursor (ortholog) NW_004955402 11649160 11670010 + 102005650 AGCD01000304;GBDF01008682;XM_005372704 XP_005372761 MODEL 9066826 protein-coding Sh3tc2 SH3 domain and tetratricopeptide repeats 2 INVOLVED IN myelination in peripheral nervous system (ortholog); peripheral nervous system myelin maintenance (ortholog); regulation of endocytic recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); brachydactyly (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog); recycling endosome (ortholog) NW_004955415 5286475 5354880 + 102030301 AGCD01015992;AGCD01015993;AGCD01015994;GBDF01192243;XM_005380627;XM_005380628;XM_005380629;XM_005380630;XM_005380631;XM_013512395;XM_013512396;XM_013512397;XR_001233271 XP_005380684;XP_005380685;XP_005380686;XP_005380687;XP_005380688;XP_013367849;XP_013367850;XP_013367851 MODEL 8879373 pseudo LOC102006508 heterogeneous nuclear ribonucleoprotein K pseudogene NW_004955445 18587531 18589305 + 102006508 AGCD01039906 MODEL 9007062 ncrna LOC102011112 uncharacterized LOC102011112 NW_004955415 26765225 26765881 - 102011112 AGCD01016604;XR_260318 MODEL 8779079 ncrna LOC102005772 uncharacterized LOC102005772 NW_004955407 30090339 30104892 - 102005772 AGCD01007625;GBDF01113497;XR_259594 MODEL 8968984 protein-coding LOC102020048 IQ domain-containing protein F5-like NW_004955532 3450275 3480124 + 102020048 AGCD01070280;AGCD01070281;AGCD01070282;AGCD01070283;GBDF01010015;GBDK01280477;XM_013507566 XP_013363020 MODEL 9060342 protein-coding Pou3f2 POU class 3 homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN astrocyte development (ortholog); cerebral cortex radially oriented cell migration (ortholog); epidermis development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); bipolar disorder (ortholog); brachydactyly (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955411 24714899 24722048 + 102021860 AGCD01012136;AGCD01012137;XM_005377797 XP_005377854 MODEL 8933218 protein-coding Rev1 REV1 DNA directed polymerase ENCODES a protein that exhibits deoxycytidyl transferase activity (ortholog); DNA binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN DNA biosynthetic process (ortholog); DNA repair (ortholog); error-prone translesion synthesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear replication fork (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955470 5677222 5738362 - 102013164 AGCD01052758;AGCD01052759;GBDJ01313280;XM_005400749;XM_005400750;XM_005400751 XP_005400806;XP_005400807;XP_005400808 MODEL 8784428 protein-coding Rps14 ribosomal protein S14 ENCODES a protein that exhibits mRNA 5'-UTR binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); erythrocyte differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); chromosome 5q deletion syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955415 4103223 4108633 + 102015401 AGCD01015965;GBCQ01011869;XM_005380574 XP_005380631 MODEL 9037830 protein-coding Wnk3 WNK lysine deficient protein kinase 3 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); protein kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); cellular hyperosmotic response (ortholog); maintenance of blood-brain barrier (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); autistic disorder (ortholog); epilepsy (ortholog); FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cytoplasm (ortholog) NW_004955475 1441068 1641599 - 102020660 AGCD01054753;AGCD01054754;AGCD01054755;AGCD01054756;AGCD01054757;GBDF01016694;XM_013502857;XM_013502858;XM_013502859;XM_013502860;XM_013502861 XP_013358311;XP_013358312;XP_013358313;XP_013358314;XP_013358315 MODEL 8768950 protein-coding LOC102011956 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955456 13079418 13133056 - 102011956 AGCD01046578;GBDK01016339;XM_013520498;XM_013520499;XM_013520500;XM_013520502;XM_013520503;XM_013520504;XM_013520505 XP_013375952;XP_013375953;XP_013375954;XP_013375956;XP_013375957;XP_013375958;XP_013375959 MODEL 8747882 protein-coding Trpm3 transient receptor potential cation channel subfamily M member 3 ENCODES a protein that exhibits calcium channel activity (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); monoatomic cation transport (ortholog); protein homotetramerization (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); cataract (ortholog); Cataract 50 with or without Glaucoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955434 2017809 2543827 + 102022219 AGCD01032082;AGCD01032083;AGCD01032084;AGCD01032085;AGCD01032086;AGCD01032087;AGCD01032088;AGCD01032089;AGCD01032090;AGCD01032091;AGCD01032092;AGCD01032093;AGCD01032094;AGCD01032095;AGCD01032096;AGCD01032097;GBDK01308805;XM_005388528;XM_005388530;XM_005388531;XM_005388535;XM_005388536;XM_005388541;XM_005388542;XM_005388548;XM_005388550;XM_005388552 XP_005388585;XP_005388587;XP_005388588;XP_005388592;XP_005388593;XP_005388598;XP_005388599;XP_005388605;XP_005388607;XP_005388609 MODEL 8737908 pseudo LOC102003301 60S ribosomal protein L9 pseudogene NW_004955402 38686017 38686662 + 102003301 AGCD01000966 MODEL 8708231 protein-coding Psph phosphoserine phosphatase ENCODES a protein that exhibits identical protein binding (ortholog); L-phosphoserine phosphatase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); L-serine biosynthetic process (ortholog); L-serine metabolic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH amelogenesis imperfecta (ortholog); amino acid metabolic disorder (ortholog); autistic disorder (ortholog); FOUND IN cytosol (ortholog) NW_004955456 8198739 8212111 - 102029365 AGCD01046460;AGCD01046461;GBDF01278340;XM_005396697;XM_013520546 XP_005396754;XP_013376000 MODEL 8860106 protein-coding Shd Src homology 2 domain containing transforming protein D ASSOCIATED WITH high grade glioma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955495 4579252 4587192 - 102010816 AGCD01061934;AGCD01061935;GBBH01135216;XM_005405804 XP_005405861 MODEL 8992053 protein-coding Leprot leptin receptor overlapping transcript ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of growth hormone receptor signaling pathway (ortholog); negative regulation of protein localization to cell surface (ortholog); negative regulation of receptor signaling pathway via JAK-STAT (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog) NW_004955423 25250873 25265437 - 102023490 AGCD01024060;GBCE01004869;XM_005385301;XM_013514521;XM_013514522 XP_005385358;XP_013369975;XP_013369976 MODEL 8887013 pseudo LOC102006128 heterogeneous nuclear ribonucleoprotein A3 pseudogene NW_004955417 3954110 3955411 - 102006128 AGCD01017933 MODEL 8888180 protein-coding Tti1 TELO2 interacting protein 1 ENCODES a protein that exhibits kinase binding (ortholog); protein-containing complex stabilizing activity (ortholog); INVOLVED IN positive regulation of DNA damage checkpoint (ortholog); protein stabilization (ortholog); regulation of TOR signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); TORC1 complex (ortholog); TORC2 complex (ortholog) NW_004955445 18676285 18729512 + 102014506 AGCD01039906;GBBH01110693;XM_005392543;XM_005392544;XM_005392545;XM_005392546;XM_005392547;XM_013518303;XM_013518304;XM_013518305 XP_005392600;XP_005392601;XP_005392602;XP_005392603;XP_005392604;XP_013373757;XP_013373758;XP_013373759 MODEL 8779878 pseudo LOC102008390 intraflagellar transport protein 74 homolog pseudogene NW_004955411 1172768 1173854 - 102008390 AGCD01011473 MODEL 8889673 protein-coding Lrrc1 leucine rich repeat containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955411 2189882 2259733 - 102008608 AGCD01011499;AGCD01011500;AGCD01011501;AGCD01011502;AGCD01011503;GBBH01116719;GBCE01115160;XM_013510755 XP_013366209 MODEL 8773304 pseudo LOC102022608 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform pseudogene NW_004955488 3365733 3367870 - 102022608 AGCD01059574;XM_005404459;XM_005404460;XM_005404461 MODEL 8872202 protein-coding LOC102013915 cysteine-rich secretory protein 3-like NW_004955411 8193665 8203985 + 102013915 AGCD01011719;AGCD01011720;XM_005377928 XP_005377985 MODEL 39133536 snrna U4 U4 spliceosomal RNA 8704748 protein-coding Serpinb12 serpin family B member 12 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); FOUND IN cornified envelope (ortholog) NW_004955402 47338874 47361485 + 102024072 AGCD01001180;GBDI01178459;XM_005373030 XP_005373087 MODEL 8734457 ncrna LOC102020062 uncharacterized LOC102020062 NW_004955445 610193 668437 + 102020062 AGCD01039320;AGCD01039321;AGCD01039322;GBDF01153612;XR_262284;XR_262285 MODEL 8956577 protein-coding Plag1 PLAG1 zinc finger ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN gland morphogenesis (ortholog); multicellular organism growth (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); cholangiocarcinoma (ortholog); genetic disease (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955454 15239042 15281669 - 102011950 AGCD01045490;GBDF01221602;XM_005396081;XM_013520253 XP_005396138;XP_013375707 MODEL 8769579 ncrna LOC102007609 uncharacterized LOC102007609 NW_004955450 683168 685850 - 102007609 AGCD01042342;GBCQ01139779;XR_262512 MODEL 8883518 protein-coding Trim58 tripartite motif containing 58 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); dynein intermediate chain binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of erythrocyte enucleation (ortholog); protein autoubiquitination (ortholog); protein polyubiquitination (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); high grade glioma (ortholog); lung cancer (ortholog) NW_004955613 229567 243019 + 102027367 AGCD01077204;AGCD01077205;GBBH01172756;GBBH01172759;XM_013510135;XM_013510136 XP_013365589;XP_013365590 MODEL 8708415 protein-coding Pmvk phosphomevalonate kinase ENCODES a protein that exhibits ATP binding (ortholog); phosphomevalonate kinase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); geranylgeranyl diphosphate biosynthetic process (ortholog); isopentenyl diphosphate biosynthetic process, mevalonate pathway (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog) NW_004955545 1421562 1440038 - 102015153 AGCD01071854;AGCD01071855;GBCB01025659;XM_005411529;XM_013508335 XP_005411586;XP_013363789 MODEL 8803140 protein-coding Slc4a4 solute carrier family 4 member 4 ENCODES a protein that exhibits identical protein binding (ortholog); sodium:bicarbonate symporter activity (ortholog); symporter activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); metanephric proximal tubule development (ortholog); positive regulation of glycolytic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autosomal recessive proximal renal tubular acidosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); membrane (ortholog) NW_004955447 1599986 1900791 - 102021061 AGCD01040522;AGCD01040523;GBCQ01094065;XM_005392771;XM_005392772;XM_005392773;XM_013518567 XP_005392828;XP_005392829;XP_005392830;XP_013374021 MODEL 9003117 protein-coding Runx1t1 RUNX1 partner transcriptional co-repressor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nuclear matrix (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955417 8580355 8714267 - 102016265 AGCD01018029;AGCD01018030;AGCD01018031;AGCD01018032;GBCB01020155;XM_005381778 XP_005381835 MODEL 9063230 protein-coding Cacfd1 calcium channel flower domain containing 1 INVOLVED IN endocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955513 2787098 2796132 + 102018630 AGCD01066890;GBBH01214050;XM_005408450;XM_005408451 XP_005408507;XP_005408508 MODEL 8770359 protein-coding Spp1 secreted phosphoprotein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); extracellular matrix binding (ortholog); integrin binding (ortholog); INVOLVED IN androgen catabolic process (ortholog); bone mineralization (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN diabetic nephropathy pathway; fibroblast growth factor signaling pathway; kidney disease pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); Albuminuria (ortholog); FOUND IN apical part of cell (ortholog); cell projection (ortholog); cytoplasm (ortholog) NW_004955474 1914477 1922025 - 102012955 AGCD01054271;GBDI01224243;XM_005401330;XM_005401331;XM_013502779;XM_013502780 XP_005401387;XP_005401388;XP_013358233;XP_013358234 MODEL 8773901 protein-coding LOC102008793 collagen alpha-2(I) chain NW_004955580 161170 172197 - 102008793 AGCD01075587;AGCD01075588;AGCD01075589;GBDF01080395;XM_005414114 XP_005414171 MODEL 8855665 protein-coding LOC102019724 olfactory receptor 1052-like NW_004955511 1381697 1382632 - 102019724 AGCD01066366;XM_005408171 XP_005408228 MODEL 9067827 protein-coding Prpsap1 phosphoribosyl pyrophosphate synthetase associated protein 1 ENCODES a protein that exhibits enzyme regulator activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN negative regulation of kinase activity (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); high grade glioma (ortholog); FOUND IN protein-containing complex (ortholog); ribose phosphate diphosphokinase complex (ortholog) NW_004955506 5951210 5987658 + 102026134 AGCD01065394;AGCD01065395;AGCD01065396;GBDF01001593;XM_005407435 XP_005407492 MODEL 8727318 protein-coding Ppy pancreatic polypeptide ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955451 17155681 17156829 - 102005767 AGCD01043724;XM_013519200 XP_013374654 MODEL 8991887 protein-coding Trpm4 transient receptor potential cation channel subfamily M member 4 ENCODES a protein that exhibits ATP binding (ortholog); calcium channel activity (ortholog); calcium ion binding (ortholog); INVOLVED IN calcium ion transport (ortholog); calcium-mediated signaling (ortholog); cellular response to ATP (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); atrioventricular block (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955559 1539036 1581800 - 102022131 AGCD01073648;AGCD01073649;AGCD01073650;AGCD01073651;GBDJ01147170;XM_005412902;XM_005412903 XP_005412959;XP_005412960 MODEL 8965675 protein-coding St6gal1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 ENCODES a protein that exhibits beta-galactoside alpha-2,6-sialyltransferase activity (ortholog); protein homodimerization activity (ortholog); sialyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); N-acetylneuraminate metabolic process (ortholog); negative regulation of brown fat cell differentiation (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); allergic contact dermatitis (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN extracellular region (ortholog); Golgi medial cisterna (ortholog); Golgi membrane (ortholog) NW_004955420 20708890 20801167 - 102027075 AGCD01021102;AGCD01021103;GBBH01030620;XM_005383258;XM_013513557 XP_005383315;XP_013369011 MODEL 8805199 pseudo LOC102016576 40S ribosomal protein S19 pseudogene NW_004955412 15418849 15419823 - 102016576 AGCD01012873 MODEL 10193142 ncrna LOC106147539 uncharacterized LOC106147539 NW_004955577 1219062 1223356 - 106147539 AGCD01075442;GBCB01068436;XR_001232464 MODEL 8856664 protein-coding Sh3yl1 SH3 and SYLF domain containing 1 ENCODES a protein that exhibits phosphatase binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN phosphatidylinositol biosynthetic process (ortholog); regulation of ruffle assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN ruffle membrane (ortholog) NW_004955487 258116 290377 - 102005047 AGCD01059215;AGCD01059216;GBCQ01039979;XM_005404334;XM_005404336;XM_013504378 XP_005404391;XP_005404393;XP_013359832 MODEL 8847500 ncrna LOC102018570 uncharacterized LOC102018570 NW_004955456 15338642 15344744 + 102018570 AGCD01046668;GBDF01041403;XR_001236341;XR_001236342 MODEL 9032833 ncrna LOC102004338 uncharacterized LOC102004338 NW_004955569 1198723 1215199 - 102004338 AGCD01074644;GBDF01080568;XR_001232427;XR_265045 MODEL 8761316 protein-coding LOC102009160 putative olfactory receptor 2W6 NW_004955465 13945042 13945998 - 102009160 AGCD01050638;XM_005399018 XP_005399075 MODEL 8834570 protein-coding Tent2 terminal nucleotidyltransferase 2 ENCODES a protein that exhibits poly(A) RNA polymerase activity (ortholog); INVOLVED IN dark adaptation (ortholog); hematopoietic progenitor cell differentiation (ortholog); hippocampus development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleus (ortholog); perforant pathway to dendrate granule cell synapse (ortholog) NW_004955425 21518154 21576068 - 102012221 AGCD01025798;GBDF01154485;XM_005386009;XM_005386010 XP_005386066;XP_005386067 MODEL 8772149 protein-coding LOC102003656 zinc finger protein 878-like NW_004955483 540140 571870 + 102003656 AGCD01057622;AGCD01057623;GBDF01054439;XM_013503796;XM_013503797 XP_013359250;XP_013359251 MODEL 8972884 protein-coding Rps15 ribosomal protein S15 ENCODES a protein that exhibits MDM2/MDM4 family protein binding (ortholog); structural constituent of ribosome (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN liver regeneration (ortholog); positive regulation of signal transduction by p53 class mediator (ortholog); ribosomal small subunit assembly (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Disease Progression (ortholog); insulinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic ribosome (ortholog) NW_004955495 6492968 6495435 - 102003980 AGCD01062082;GBDF01003537;XM_005405969 XP_005406026 MODEL 9013088 protein-coding Pigg phosphatidylinositol glycan anchor biosynthesis class G (EMM blood group) ENCODES a protein that exhibits mannose-ethanolamine phosphotransferase activity (ortholog); transferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 53 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955514 119804 152603 + 102004960 AGCD01066997;GBDJ01395605;XM_005408666;XM_005408667;XM_013506834;XM_013506835;XM_013506836;XR_264489 XP_005408723;XP_005408724;XP_013362288;XP_013362289;XP_013362290 MODEL 9037437 ncrna LOC102005042 uncharacterized LOC102005042 NW_004955417 24614807 24627073 - 102005042 AGCD01018467;GBDF01305977;XR_001233396 MODEL 9001101 protein-coding Esm1 endothelial cell specific molecule 1 ENCODES a protein that exhibits hepatocyte growth factor receptor binding (ortholog); integrin binding (ortholog); INVOLVED IN angiogenesis (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of hepatocyte growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Liver Neoplasms (ortholog); stomach cancer (ortholog) NW_004955446 12644220 12665351 + 102021812 AGCD01040239;GBBH01086228;XM_005392712 XP_005392769 MODEL 8738264 protein-coding Rnf39 ring finger protein 39 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of cytoplasmic pattern recognition receptor signaling pathway (ortholog); positive regulation of cGAS/STING signaling pathway (ortholog); protein K63-linked ubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955583 201638 206754 - 102029248 AGCD01075802;AGCD01075803;AGCD01075804;GBDJ01129612;GBDK01092393;XM_013509780 XP_013365234 MODEL 9029843 protein-coding Rbks ribokinase ENCODES a protein that exhibits identical protein binding (ortholog); ribokinase activity (ortholog); INVOLVED IN pentose-phosphate shunt (ortholog); PARTICIPATES IN pentose phosphate pathway; ribose 5-phosphate isomerase deficiency pathway; transaldolase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955469 9734551 9831397 - 102010685 AGCD01052516;AGCD01052517;GBDF01085787;XM_005400521;XM_013522606;XM_013522607;XR_001236972 XP_005400578;XP_013378060;XP_013378061 MODEL 8995005 protein-coding Pspn persephin ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog) NW_004955495 3218720 3220941 + 102014686 AGCD01061838;GBCE01007404;XM_005405723 XP_005405780 MODEL 9050909 protein-coding Slc4a5 solute carrier family 4 member 5 ENCODES a protein that exhibits sodium:bicarbonate symporter activity (ortholog); INVOLVED IN cerebrospinal fluid secretion (ortholog); epithelial cell development (ortholog); mitochondrion distribution (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955424 11426020 11537141 + 102003983 AGCD01024566;AGCD01024567;AGCD01024568;GBDF01158181;XM_005385520;XM_005385521;XM_005385522;XM_005385523;XM_013514621 XP_005385577;XP_005385578;XP_005385579;XP_005385580;XP_013370075 MODEL 8940082 ncrna LOC102006510 uncharacterized LOC102006510 NW_004955576 595097 604134 + 102006510 AGCD01075295;AGCD01075296;GBDF01017473;XR_001232460;XR_265072 MODEL 8868835 protein-coding She Src homology 2 domain containing E ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955545 989390 1011100 - 102012248 AGCD01071830;AGCD01071831;GBDF01178649;GBDF01192726;XM_005411520 XP_005411577 MODEL 8905772 protein-coding Riox1 ribosomal oxygenase 1 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); histone H3K36 demethylase activity (ortholog); histone H3K36me/H3K36me2 demethylase activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of osteoblast differentiation (ortholog); regulation of DNA repair (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955523 1907570 1910038 - 102009980 AGCD01068549;AGCD01068550;GBBH01126419;XM_013507126 XP_013362580 MODEL 8836186 ncrna LOC102011114 uncharacterized LOC102011114 NW_004955416 28362023 28367569 + 102011114 AGCD01017627;GBCQ01114433;XR_001233378;XR_001233379;XR_260430;XR_260431;XR_260433 MODEL 8892103 protein-coding Leprotl1 leptin receptor overlapping transcript like 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955463 6580294 6585738 + 102007870 AGCD01049685;GBDI01020304;XM_013521532 XP_013376986 MODEL 39133537 snrna U4 U4 spliceosomal RNA 8712256 protein-coding LOC102022609 putative MAGE domain-containing protein MAGEA13P NW_004955489 6761364 6855797 - 102022609 AGCD01059965;AGCD01059966;AGCD01059967;GBDF01303343;XM_013504466;XM_013504467 XP_013359920;XP_013359921 MODEL 8807482 ncrna LOC102013917 uncharacterized LOC102013917 NW_004955466 8471679 8498163 + 102013917 AGCD01050989;AGCD01050990;GBDK01117754;XR_001236825;XR_263297 MODEL 8999017 protein-coding Pou3f4 POU class 3 homeobox 4 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); minor groove of adenine-thymine-rich DNA binding (ortholog); INVOLVED IN cochlea morphogenesis (ortholog); forebrain neuron differentiation (ortholog); inner ear development (ortholog); ASSOCIATED WITH Bilateral Hearing Loss (ortholog); Deafness (ortholog); Ependymomas (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955529 2726121 2727311 + 102020605 AGCD01069754;GBCB01037300;XM_005410076 XP_005410133 MODEL 8965806 protein-coding Sp8 Sp8 transcription factor ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN dorsal/ventral pattern formation (ortholog); embryonic limb morphogenesis (ortholog); proximal/distal pattern formation (ortholog) NW_004955410 23401888 23404654 - 102004254 AGCD01011100;AGCD01011101;GBDF01128758;XM_013510495 XP_013365949 MODEL 8715985 protein-coding LOC102004351 NADH-cytochrome b5 reductase 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955406 38958766 38964597 - 102004351 AGCD01006614;GBDK01276274;XM_005375237 XP_005375294 MODEL 9038087 pseudo LOC102007611 60 kDa heat shock protein, mitochondrial pseudogene NW_004955402 53200161 53201948 + 102007611 AGCD01001363 MODEL 8886087 protein-coding Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit ENCODES a protein that exhibits DNA polymerase activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN DNA biosynthetic process (ortholog); DNA repair (ortholog); error-prone translesion synthesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); site of DNA damage (ortholog); zeta DNA polymerase complex (ortholog) NW_004955411 36068248 36246607 - 102029601 AGCD01012464;AGCD01012465;AGCD01012466;AGCD01012467;AGCD01012468;AGCD01012469;GBDK01092750;XM_005377901;XM_005377902;XM_005377904;XM_005377905;XM_013510833;XM_013510834 XP_005377958;XP_005377959;XP_005377961;XP_005377962;XP_013366287;XP_013366288 MODEL 9032812 pseudo LOC102003302 COMM domain-containing protein 10-like NW_004955602 139591 140263 + 102003302 AGCD01076763 MODEL 9020795 protein-coding Tent4a terminal nucleotidyltransferase 4A ENCODES a protein that exhibits guanylyltransferase activity (ortholog); INVOLVED IN negative regulation of nuclear-transcribed mRNA poly(A) tail shortening (ortholog); positive regulation of 3'-UTR-mediated mRNA stabilization (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955504 4443051 4476373 + 102015746 AGCD01064885;GBBH01207209;GBDI01113697;XM_005407069;XM_005407070 XP_005407126;XP_005407127 MODEL 9003011 pseudo LOC102012374 methyl-CpG-binding domain protein 3-like 2 pseudogene NW_004955563 759987 761698 + 102012374 AGCD01074086;XM_005413203 MODEL 8831180 protein-coding Trim59 tripartite motif containing 59 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); host-mediated suppression of symbiont invasion (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955448 10962181 10971948 - 102004658 AGCD01041507;GBCQ01126672;XM_005393122;XM_005393123;XM_013518598 XP_005393179;XP_005393180;XP_013374052 MODEL 8994743 protein-coding Spp2 secreted phosphoprotein 2 INVOLVED IN protein-containing complex assembly (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); hepatocellular carcinoma (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955453 2130606 2158603 - 102003726 AGCD01044623;GBDI01278106;XM_005395331 XP_005395388 MODEL 8751440 protein-coding Runx2 RUNX family transcription factor 2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); bone regeneration (ortholog); cell maturation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Aortic Calcification (ortholog); Bone Fractures (ortholog); FOUND IN chromatin (ortholog); core-binding factor complex (ortholog); cytoplasm (ortholog) NW_004955437 10598145 10885858 + 102025170 AGCD01034563;AGCD01034564;AGCD01034565;AGCD01034566;AGCD01034567;AGCD01034568;GBCE01001577;XM_005389822;XM_005389823;XM_005389831;XM_013516854;XM_013516855;XM_013516856;XM_013516857 XP_005389879;XP_005389880;XP_005389888;XP_013372308;XP_013372309;XP_013372310;XP_013372311 MODEL 9049082 ncrna LOC102008798 uncharacterized LOC102008798 NW_004955592 168536 235179 + 102008798 AGCD01076300;AGCD01076301;GBDF01077466;XR_001232541;XR_001232542;XR_265134;XR_265135;XR_265136 MODEL 8751648 pseudo LOC102006131 polypeptide N-acetylgalactosaminyltransferase 11 pseudogene NW_004955418 29489392 29494643 + 102006131 AGCD01019466;AGCD01019467 MODEL 8753505 protein-coding LOC102013528 olfactory receptor 8I2 NW_004955511 1030944 1031876 + 102013528 AGCD01066354;XM_005408222 XP_005408279 MODEL 8782346 protein-coding Lrrc10 leucine rich repeat containing 10 ENCODES a protein that exhibits actin binding (ortholog); alpha-actinin binding (ortholog); INVOLVED IN cardiac muscle cell development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); congestive heart failure (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cytoskeleton (ortholog); mitochondrion (ortholog); myofibril (ortholog) NW_004955405 9908866 9910375 - 102025649 AGCD01004799;XM_005374302 XP_005374359 MODEL 8876425 protein-coding Tti2 TELO2 interacting protein 2 ASSOCIATED WITH autosomal recessive intellectual developmental disorder 39 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN TTT Hsp90 cochaperone complex (ortholog) NW_004955463 9652226 9660712 - 102007869 AGCD01049795;GBDF01248696;XM_005398403;XM_005398404 XP_005398460;XP_005398461 MODEL 8866655 protein-coding LOC102020053 olfactory receptor 12-like NW_004955542 1204031 1204996 - 102020053 AGCD01071493;XM_005411171 XP_005411228 MODEL 8863532 protein-coding Serpinb13 serpin family B member 13 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); protease binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of keratinocyte apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955402 47376973 47395267 + 102024407 AGCD01001180;AGCD01001181;XM_005373031 XP_005373088 MODEL 8788880 protein-coding Wnk4 WNK lysine deficient protein kinase 4 ENCODES a protein that exhibits chloride ion binding (ortholog); ion channel inhibitor activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN aldosterone secretion (ortholog); calcium ion homeostasis (ortholog); cellular response to xenobiotic stimulus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN bicellular tight junction (ortholog); cell body (ortholog); cytoplasm (ortholog) NW_004955451 16593840 16606817 + 102028924 AGCD01043695;AGCD01043696;GBBH01026714;GBDF01163377;XM_013519256 XP_013374710 MODEL 10209589 protein-coding LOC106147540 leucine-twenty homeobox-like NW_004955578 1356915 1359190 + 106147540 AGCD01075522;AGCD01075523;XM_013509646 XP_013365100 MODEL 8743600 ncrna LOC102011960 uncharacterized LOC102011960 NW_004955459 5331828 5338432 - 102011960 AGCD01048044;XR_263016 MODEL 9035971 protein-coding Plagl1 PLAG1 like zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear body (ortholog) NW_004955436 16452797 16511872 + 102005503 AGCD01033919;AGCD01033920;GBBH01224118;XM_013516703 XP_013372157 MODEL 9033791 protein-coding LOC102009564 regulator of nonsense transcripts 3A-like NW_004956152 404 2615 - 102009564 AGCD01079146;GBDJ01132460;XM_005415172 XP_005415229 MODEL 8794146 protein-coding Pnck pregnancy up-regulated nonubiquitous CaM kinase ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955580 401411 406663 - 102014842 AGCD01075603;AGCD01075604;GBBH01054212;XM_005414137;XM_005414138;XM_013509673;XM_013509675 XP_005414194;XP_005414195;XP_013365127;XP_013365129 MODEL 8841654 protein-coding LOC102022610 olfactory receptor 10AC1-like NW_004955491 70906 72516 - 102022610 AGCD01060319;GBDF01160348;XM_005404876 XP_005404933 MODEL 8732769 pseudo LOC102005043 Golgi apparatus membrane protein TVP23 homolog B pseudogene NW_004955482 7561663 7562789 - 102005043 AGCD01057475 MODEL 8752015 protein-coding Cachd1 cache domain containing 1 ENCODES a protein that exhibits channel activator activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN neurogenesis (ortholog); positive regulation of protein localization to cell surface (ortholog); ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); cerebral palsy (ortholog); FOUND IN plasma membrane (ortholog) NW_004955423 25675396 25818924 - 102026993 AGCD01024083;AGCD01024084;AGCD01024085;GBBH01163494;XM_013514449;XM_013514450;XM_013514451 XP_013369903;XP_013369904;XP_013369905 MODEL 8887040 protein-coding LOC102008392 olfactory receptor 147-like NW_004955412 25370885 25371823 - 102008392 AGCD01013151;XM_005378421 XP_005378478 MODEL 8802790 protein-coding LOC102005777 uncharacterized LOC102005777 NW_004955408 35127767 35155131 - 102005777 AGCD01008930;XM_013507575 XP_013363029 MODEL 8994906 protein-coding Trpm5 transient receptor potential cation channel subfamily M member 5 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); monoatomic ion channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN monoatomic ion transmembrane transport (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) NW_004955422 14180067 14202041 - 102009068 AGCD01022855;GBBH01106809;XM_013514348;XM_013514349 XP_013369802;XP_013369803 MODEL 9012201 protein-coding Pqbp1 polyglutamine binding protein 1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); GTPase binding (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); alternative mRNA splicing, via spliceosome (ortholog); cellular response to exogenous dsRNA (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); ciliary base (ortholog); cytoplasm (ortholog) NW_004955543 430324 434205 + 102026569 AGCD01071585;GBDF01290192;XM_005411285;XM_005411286;XM_005411287 XP_005411342;XP_005411343;XP_005411344 MODEL 8756703 protein-coding St6gal2 ST6 beta-galactoside alpha-2,6-sialyltransferase 2 ENCODES a protein that exhibits beta-galactoside alpha-2,6-sialyltransferase activity (ortholog); sialyltransferase activity (ortholog); INVOLVED IN oligosaccharide metabolic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); lung cancer (ortholog) NW_004955470 10936073 10993672 - 102004060 AGCD01052881;AGCD01052882;GBBH01024916;GBDJ01001168;XM_013522839;XM_013522840 XP_013378293;XP_013378294 MODEL 8841763 protein-coding Rnf4 ring finger protein 4 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); nuclear androgen receptor binding (ortholog); INVOLVED IN cellular response to arsenic-containing substance (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to gamma radiation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Angelman syndrome (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955514 1501943 1525689 + 102024495 AGCD01067054;AGCD01067055;GBCE01133730;XM_005408733;XM_005408734 XP_005408790;XP_005408791 MODEL 8871379 protein-coding Rbl1 RB transcriptional corepressor like 1 ENCODES a protein that exhibits promoter-specific chromatin binding (ortholog); INVOLVED IN negative regulation of cellular senescence (ortholog); negative regulation of gene expression (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955422 24620068 24695203 + 102016391 AGCD01023226;AGCD01023227;GBDF01252467;XM_005384716;XM_005384718;XM_013514137 XP_005384773;XP_005384775;XP_013369591 MODEL 8812108 protein-coding LOC102016581 rap guanine nucleotide exchange factor 2-like NW_004955414 50666 55998 - 102016581 AGCD01014696;GBDF01253057;XM_013511710 XP_013367164 MODEL 8821789 protein-coding LOC102006512 protein FAM170A-like NW_004955448 3085060 3094177 + 102006512 AGCD01041301;GBDK01265185;XM_005393037;XM_013518614 XP_005393094;XP_013374068 MODEL 8772367 protein-coding LOC102020064 neutrophil gelatinase-associated lipocalin-like NW_004955570 264285 270706 + 102020064 AGCD01074718;AGCD01074719;GBDF01000047;XM_005413522;XM_005413523 XP_005413579;XP_005413580 MODEL 8954511 protein-coding Shank1 SH3 and multiple ankyrin repeat domains 1 ENCODES a protein that exhibits ankyrin repeat binding (ortholog); G protein-coupled receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN adult behavior (ortholog); AMPA selective glutamate receptor signaling pathway (ortholog); associative learning (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Ataxia (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN dendrite (ortholog); dendritic spine (ortholog); excitatory synapse (ortholog) NW_004955559 522466 566275 + 102015463 AGCD01073591;AGCD01073592;AGCD01073593;GBCQ01015314;XM_013508943 XP_013364397 MODEL 8945824 protein-coding Letm1 leucine zipper and EF-hand containing transmembrane protein 1 ENCODES a protein that exhibits calcium:proton antiporter activity (ortholog); potassium:proton antiporter activity (ortholog); INVOLVED IN calcium export from the mitochondrion (ortholog); calcium ion transport (ortholog); cristae formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebellar ataxia (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955514 1040103 1069297 - 102019836 AGCD01067032;AGCD01067033;AGCD01067034;GBBH01092661;GBDF01155938;XM_013506764 XP_013362218 MODEL 8809063 protein-coding Sp9 Sp9 transcription factor ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryonic limb morphogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog) NW_004955449 1003462 1006023 - 102007715 AGCD01041780;AGCD01041781;XM_005393191 XP_005393248 MODEL 8872828 protein-coding Plagl2 PLAG1 like zinc finger 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955422 28839021 28847255 + 102010704 AGCD01023372;GBCB01076356;GBDI01219915;XM_005384877 XP_005384934 MODEL 8855238 protein-coding Prpsap2 phosphoribosyl pyrophosphate synthetase associated protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN bone development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN protein-containing complex (ortholog); ribose phosphate diphosphokinase complex (ortholog) NW_004955467 676845 722175 - 102007531 AGCD01051231;AGCD01051232;AGCD01051233;AGCD01051234;AGCD01051235;GBDK01279678;XM_005399288;XM_013522228 XP_005399345;XP_013377682 MODEL 9007772 protein-coding Rex1bd required for excision 1-B domain containing ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955524 3003820 3005677 - 102009210 AGCD01068848;GBCE01001434;GBDJ01073176;XM_013507290 XP_013362744 MODEL 8848615 protein-coding Psrc1 proline and serine rich coiled-coil 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); mitotic metaphase chromosome alignment (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); coronary artery disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) NW_004955435 12697179 12702021 - 102025719 AGCD01033162;GBDK01264620;XM_013516446;XM_013516447;XM_013516448;XM_013516449;XM_013516450;XM_013516451;XM_013516452;XM_013516453 XP_013371900;XP_013371901;XP_013371902;XP_013371903;XP_013371904;XP_013371905;XP_013371906;XP_013371907 MODEL 8704636 protein-coding Shf Src homology 2 domain containing F PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955409 8219295 8227877 + 102021316 AGCD01009387;GBDJ01390482;XM_013510314;XM_013510315 XP_013365768;XP_013365769 MODEL 9009924 protein-coding Lrrc10b leucine rich repeat containing 10B NW_004955511 6096626 6098344 - 102021157 AGCD01066596;GBBH01032881;XM_013506504 XP_013361958 MODEL 8726609 protein-coding Pwwp3b PWWP domain containing 3B ASSOCIATED WITH Breast Cancer, Familial (ortholog); factor VIII deficiency (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955548 2904964 2951956 + 102006614 AGCD01072411;AGCD01072412;GBDF01125244;XM_005412014;XM_005412015;XM_005412016;XM_013508513;XM_013508514;XM_013508515 XP_005412071;XP_005412072;XP_005412073;XP_013363967;XP_013363968;XP_013363969 MODEL 9051425 protein-coding Espl1 extra spindle pole bodies like 1, separase ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); homologous chromosome segregation (ortholog); meiosis I (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); breast cancer (ortholog); FOUND IN centrosome (ortholog); nucleoplasm (ortholog); separase-securin complex (ortholog) NW_004955458 530269 553919 + 102017308 AGCD01047132;AGCD01047133;GBDF01082490;XM_005397164;XM_005397165;XM_005397166;XM_005397167 XP_005397221;XP_005397222;XP_005397223;XP_005397224 MODEL 39133538 snrna U4 U4 spliceosomal RNA 8845481 ncrna LOC102003659 uncharacterized LOC102003659 NW_004955420 14434101 14442240 + 102003659 AGCD01020946;GBDF01020272;XR_260715;XR_260716 MODEL 8737316 protein-coding LOC102013918 interferon lambda-3 NW_004955468 290537 294752 - 102013918 AGCD01051687;AGCD01051688;XM_013522286 XP_013377740 MODEL 8734447 protein-coding LOC102019732 transmembrane protein 217 NW_004955437 5919268 5920806 + 102019732 AGCD01034405;GBDF01011016;XM_013517044 XP_013372498 MODEL 9001454 ncrna LOC102007612 uncharacterized LOC102007612 NW_004955451 5393479 5395031 - 102007612 AGCD01043166;GBDF01289099;XR_262582 MODEL 8795030 protein-coding Pou4f1 POU class 4 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell migration in hindbrain (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); ATAXIA, INTENTION TREMOR, AND HYPOTONIA SYNDROME, CHILDHOOD-ONSET (ortholog); Uterine Cervical Dysplasia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); neuron projection (ortholog) NW_004955404 28812762 28818024 + 102023975 AGCD01003964;AGCD01003965;GBDF01291045;XM_005374236 XP_005374293 MODEL 9038218 protein-coding Wnt1 Wnt family member 1 ENCODES a protein that exhibits cytokine activity (ortholog); protein domain specific binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); astrocyte-dopaminergic neuron signaling (ortholog); bone development (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atherosclerosis (ortholog); Bradycardia (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955500 7797063 7811142 + 102010502 AGCD01063947;AGCD01063948;AGCD01063949;GBDF01147903;XM_005406674 XP_005406731 MODEL 8814818 pseudo LOC102003304 putative zinc finger protein 724 NW_004955607 218870 244872 - 102003304 AGCD01076979;AGCD01076980;AGCD01076981;XM_005414905 MODEL 8852833 protein-coding Tent4b terminal nucleotidyltransferase 4B ENCODES a protein that exhibits guanylyltransferase activity (ortholog); poly(A) RNA polymerase activity (ortholog); telomerase RNA binding (ortholog); INVOLVED IN carbohydrate homeostasis (ortholog); histone mRNA catabolic process (ortholog); miRNA catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955433 8288432 8347347 + 102014936 AGCD01031590;AGCD01031591;GBCE01037318;GBDI01292921;XM_005388265;XM_005388268 XP_005388322;XP_005388325 MODEL 8726374 protein-coding LOC102022613 uncharacterized LOC102022613 NW_004955494 2980579 2986183 - 102022613 AGCD01061458;GBDF01238692;XM_005405425 XP_005405482 MODEL 9063580 ncrna LOC102005050 uncharacterized LOC102005050 NW_004955488 8461648 8536710 - 102005050 AGCD01059713;AGCD01059714;AGCD01059715;AGCD01059716;AGCD01059717;AGCD01059718;GBDF01148383;XR_001231164 MODEL 10288236 ncrna LOC106147541 uncharacterized LOC106147541 NW_004955578 655872 663409 - 106147541 AGCD01075491;GBDJ01172614;XR_001232467 MODEL 8907004 pseudo LOC102009179 60S ribosomal protein L23a pseudogene NW_004955418 372775 373635 - 102009179 AGCD01018673 MODEL 8877326 protein-coding Runx3 RUNX family transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); cell maturation (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); ankylosing spondylitis (ortholog); FOUND IN chromatin (ortholog); core-binding factor complex (ortholog); cytoplasm (ortholog) NW_004955452 4580444 4606820 - 102015800 AGCD01043986;GBDI01170141;GBDI01227289;XM_013519718 XP_013375172 MODEL 8915468 protein-coding Riox2 ribosomal oxygenase 2 ENCODES a protein that exhibits identical protein binding (ortholog); peptidyl-histidine dioxygenase activity (ortholog); transcription corepressor activity (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955407 173590 203401 + 102011277 AGCD01006731;AGCD01006732;AGCD01006733;GBCQ01154799;XM_005375492;XM_005375494 XP_005375549;XP_005375551 MODEL 8993937 pseudo LOC102005778 small nuclear ribonucleoprotein Sm D1 pseudogene NW_004955458 15135529 15136459 - 102005778 AGCD01047865 MODEL 8904518 protein-coding Ttk TTK protein kinase ENCODES a protein that exhibits identical protein binding (ortholog); kinetochore binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN female meiosis chromosome segregation (ortholog); meiotic spindle assembly checkpoint signaling (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); kinetochore (ortholog) NW_004955502 7824194 7866879 + 102009298 AGCD01064462;AGCD01064463;GBDF01089086;XM_005406915;XM_005406916;XM_005406917 XP_005406972;XP_005406973;XP_005406974 MODEL 8977832 protein-coding LOC102018571 olfactory receptor 6C6-like NW_004955458 2623103 2624062 - 102018571 AGCD01047240;XM_005397496 XP_005397553 MODEL 8930704 protein-coding St6galnac1 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 ENCODES a protein that exhibits alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); host-mediated modulation of intestinal microbiota composition (ortholog); host-mediated perturbation of symbiont process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955506 5656182 5677596 + 102021029 AGCD01065377;AGCD01065378;GBCE01165447;XM_005407421;XM_005407422;XM_005407423;XM_013506077 XP_005407478;XP_005407479;XP_005407480;XP_013361531 MODEL 8954657 protein-coding Pradc1 protease associated domain containing 1 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955424 12403090 12408055 + 102017791 AGCD01024604;GBDF01155799;XM_005385569 XP_005385626 MODEL 8773303 pseudo LOC102020054 testis-expressed sequence 37 protein-like NW_004955439 2677888 2678876 - 102020054 AGCD01035657 MODEL 8767094 protein-coding LOC102016583 olfactory receptor 51D1 NW_004955414 20229290 20230264 + 102016583 AGCD01015365;XM_013511717 XP_013367171 MODEL 8781748 protein-coding Serpinb2 serpin family B member 2 PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); colon adenocarcinoma (ortholog); FOUND IN cornified envelope (ortholog) NW_004955402 47707182 47720688 + 102026493 AGCD01001192;GBBH01024006;XM_005373036 XP_005373093 MODEL 9035318 ncrna LOC102011962 uncharacterized LOC102011962 NW_004955410 25402864 25406681 - 102011962 AGCD01011152;GBDF01041224;XR_259864 MODEL 8723798 protein-coding Rps15a ribosomal protein S15a ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN positive regulation of cell cycle (ortholog); positive regulation of cell population proliferation (ortholog); response to virus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); Diamond-Blackfan anemia 20 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) NW_004955442 2530838 2535421 - 102029668 AGCD01037468;GBBH01189526;XM_005391084 XP_005391141 MODEL 8720374 protein-coding LOC102004352 tomoregulin-1-like NW_004955454 12413700 12441760 + 102004352 AGCD01045411;AGCD01045412;XM_013520017 XP_013375471 MODEL 8716137 protein-coding LOC102009565 phosphoinositide-3-kinase-interacting protein 1-like NW_004957624 10 1097 - 102009565 AGCD01081020;GBDJ01181150;GBDK01091793;XM_005415233 XP_005415290 MODEL 9031308 protein-coding Shank2 SH3 and multiple ankyrin repeat domains 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); SH3 domain binding (ortholog); structural constituent of postsynaptic density (ortholog); INVOLVED IN adult behavior (ortholog); adult locomotory behavior (ortholog); associative learning (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); ciliary membrane (ortholog) NW_004955422 15295800 15818067 + 102018504 AGCD01022876;AGCD01022877;AGCD01022878;AGCD01022879;AGCD01022880;AGCD01022881;AGCD01022882;GBBH01227949;XM_013514155;XM_013514156;XM_013514157 XP_013369609;XP_013369610;XP_013369611 MODEL 8706521 protein-coding Lrrc14 leucine rich repeat containing 14 ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN negative regulation of toll-like receptor signaling pathway (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955454 3142621 3146470 + 102010226 AGCD01045057;GBDI01115994;XM_005395903;XM_005395907;XM_013520075;XM_013520076;XM_013520077;XM_013520078;XM_013520079;XM_013520080;XM_013520081;XM_013520082;XM_013520083 XP_005395960;XP_005395964;XP_013375529;XP_013375530;XP_013375531;XP_013375532;XP_013375533;XP_013375534;XP_013375535;XP_013375536;XP_013375537 MODEL 9038190 ncrna LOC102008799 uncharacterized LOC102008799 NW_004955402 56514337 56517087 + 102008799 AGCD01001468;GBDF01212633;XR_259105 MODEL 8991702 protein-coding Slc4a7 solute carrier family 4 member 7 ENCODES a protein that exhibits sodium:bicarbonate symporter activity (ortholog); INVOLVED IN auditory receptor cell development (ortholog); camera-type eye photoreceptor cell differentiation (ortholog); cellular response to growth factor stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) NW_004955430 18991615 19059590 - 102017367 AGCD01029704;GBBH01198258;GBCQ01154648;XM_013515625 XP_013371079 MODEL 8984713 ncrna LOC102013534 uncharacterized LOC102013534 NW_004955434 16255649 16273655 - 102013534 AGCD01032521;AGCD01032522;AGCD01032523;AGCD01032524;GBDF01288452;XR_261620 MODEL 8895466 protein-coding Spa17 sperm autoantigenic protein 17 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); Merkel cell carcinoma (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); external side of plasma membrane (ortholog) NW_004955412 25741369 25753681 + 102011188 AGCD01013173;GBDF01006464;XM_005378430 XP_005378487 MODEL 8739315 protein-coding LOC102004343 general transcription factor II-I repeat domain-containing protein 1-like NW_004955402 7011600 7036323 - 102004343 AGCD01000164;AGCD01000165;GBDJ01109813;XM_005373133 XP_005373190 MODEL 8866424 protein-coding Cacna1a calcium voltage-gated channel subunit alpha1 A ENCODES a protein that exhibits calmodulin binding (ortholog); high voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN adult walking behavior (ortholog); behavioral response to pain (ortholog); calcium ion import (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); Alternating Hemiplegia of Childhood 1 (ortholog); FOUND IN dendrite; neuronal cell body; calyx of Held (ortholog) NW_004955415 32182536 32457511 - 102014559 AGCD01016714;AGCD01016715;AGCD01016716;AGCD01016717;AGCD01016718;AGCD01016719;AGCD01016720;AGCD01016721;GBDI01088844;GBDI01386674;XM_013512132 XP_013367586 MODEL 8856090 protein-coding Plat plasminogen activator, tissue type ENCODES a protein that exhibits phosphoprotein binding (ortholog); serine-type endopeptidase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to luteinizing hormone stimulus (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute promyelocytic leukemia (ortholog); Acute Traumatic Coagulopathy (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955536 730962 754333 + 102009758 AGCD01070737;GBCQ01003427;XM_005410511 XP_005410568 MODEL 8772168 protein-coding Trpm6 transient receptor potential cation channel subfamily M member 6 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); magnesium ion transmembrane transporter activity (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); magnesium ion transmembrane transport (ortholog); metal ion transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); epilepsy (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); nucleus (ortholog) NW_004955512 4179194 4323523 + 102006059 AGCD01066733;AGCD01066734;AGCD01066735;AGCD01066736;AGCD01066737;AGCD01066738;AGCD01066739;AGCD01066740;AGCD01066741;GBDJ01377962;XM_005408321;XM_013506547 XP_005408378;XP_013362001 MODEL 8835268 protein-coding LOC102009161 lupus La protein-like NW_004955412 27605630 27607235 - 102009161 AGCD01013242;GBBH01116715;GBCC01021705;XM_005378521 XP_005378578 MODEL 9018406 protein-coding Rbl2 RB transcriptional corepressor like 2 ENCODES a protein that exhibits promoter-specific chromatin binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); Brunet-Wagner neurodevelopmental syndrome (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955433 11185726 11237645 + 102028222 AGCD01031649;GBDJ01191912;XM_005388302;XM_005388305;XM_005388307;XM_013516218 XP_005388359;XP_005388362;XP_005388364;XP_013371672 MODEL 8886057 ncrna LOC102025086 uncharacterized LOC102025086 NW_004955455 14383123 14393046 - 102025086 AGCD01046089;AGCD01046090;GBBH01162429;XR_262859 MODEL 8759035 protein-coding Pigh phosphatidylinositol glycan anchor biosynthesis class H INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH Glycosylphosphatidylinositol Biosynthesis Defect 17 (ortholog); prostate cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (ortholog) NW_004955466 2601368 2616255 + 102011852 AGCD01050748;AGCD01050749;AGCD01050750;GBBH01168046;XM_005399070;XM_005399071;XM_005399072;XM_013521893;XR_263283;XR_263284 XP_005399127;XP_005399128;XP_005399129;XP_013377347 MODEL 8741119 pseudo LOC102020067 chromobox protein homolog 3 pseudogene NW_004955448 4628629 4629519 - 102020067 AGCD01041350 MODEL 8849945 protein-coding Pxdc1 PX domain containing 1 ASSOCIATED WITH cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955465 9589248 9613700 + 102013916 AGCD01050493;GBCE01005280;GBDJ01191084;XM_005398893 XP_005398950 MODEL 8842726 protein-coding Letm2 leucine zipper and EF-hand containing transmembrane protein 2 ASSOCIATED WITH sarcoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955463 13990353 14012911 + 102024100 AGCD01049897;GBDF01044235;XM_005398447;XM_005398448;XM_013521513;XM_013521514;XM_013521515 XP_005398504;XP_005398505;XP_013376967;XP_013376968;XP_013376969 MODEL 8827554 protein-coding Pnisr PNN interacting serine and arginine rich protein ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nuclear speck (ortholog) NW_004955411 25270569 25297571 - 102023787 AGCD01012151;GBCB01022118;XM_005377803;XM_005377804;XM_005377805;XM_013510778;XM_013510779;XM_013510780;XM_013510781;XM_013510782 XP_005377860;XP_005377861;XP_005377862;XP_013366232;XP_013366233;XP_013366234;XP_013366235;XP_013366236 MODEL 8927205 protein-coding Shfl shiftless antiviral inhibitor of ribosomal frameshifting ENCODES a protein that exhibits identical protein binding (ortholog); ribosome binding (ortholog); RNA binding (ortholog); INVOLVED IN defense response to virus (ortholog); negative regulation of translational frameshifting (ortholog); negative regulation of viral genome replication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955495 1431677 1437035 + 102027994 AGCD01061690;AGCD01061691;GBCE01030619;GBDK01073870;XM_005405581 XP_005405638 MODEL 8845562 protein-coding Trim6 tripartite motif containing 6 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to interferon-beta (ortholog); cellular response to virus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955414 21495593 21513703 + 102008616 AGCD01015422;GBDF01054312;XM_005380095;XM_013511994;XM_013511995;XM_013511997;XM_013511998;XM_013511999 XP_005380152;XP_013367448;XP_013367449;XP_013367451;XP_013367452;XP_013367453 MODEL 8855261 ncrna LOC102007614 uncharacterized LOC102007614 NW_004956066 2115 8161 - 102007614 AGCD01078986;GBDI01339207;XR_001232606;XR_265204 MODEL 9002280 protein-coding LOC102008394 arachidonate 12-lipoxygenase, 12S-type NW_004955467 9919322 9931806 - 102008394 AGCD01051535;AGCD01051536;GBBH01140041;XM_005399578 XP_005399635 MODEL 9037593 protein-coding Pou4f2 POU class 4 homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN axon extension (ortholog); axon guidance (ortholog); axonogenesis (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); euchromatin (ortholog); nuclear speck (ortholog) NW_004955428 2325775 2329122 + 102010927 AGCD01027632;XM_005386664 XP_005386721 MODEL 39131432 protein-coding IGLV2-33 8942093 protein-coding LOC102003305 olfactory receptor 4F4-like NW_004955614 319933 320880 - 102003305 AGCD01077239;XM_005414977 XP_005415034 MODEL 8822172 protein-coding Pstk phosphoseryl-tRNA kinase ENCODES a protein that exhibits L-seryl-tRNA(Sec) kinase activity (ortholog); seryl-selenocysteinyl-tRNA kinase activity (ortholog); tRNA binding (ortholog); INVOLVED IN selenium compound metabolic process (ortholog); selenocysteine incorporation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog) NW_004955477 1147596 1157755 + 102024458 AGCD01055503;GBDF01039234;XM_005401952 XP_005402009 MODEL 8967078 protein-coding Rexo1 RNA exonuclease 1 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955495 6194380 6219907 + 102025594 AGCD01062056;AGCD01062057;GBDF01010614;XM_005405946 XP_005406003 MODEL 8865628 protein-coding LOC102011120 filamin-interacting protein FAM101A ENCODES a protein that exhibits filamin binding (ortholog); INVOLVED IN actin filament bundle organization (ortholog); negative regulation of bone mineralization involved in bone maturation (ortholog); negative regulation of chondrocyte development (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN actin filament bundle (ortholog) NW_004955482 5034075 5044162 - 102011120 AGCD01057318;GBCE01016386;XM_005403010;XM_005403011;XM_013503639 XP_005403067;XP_005403068;XP_013359093 MODEL 8784743 protein-coding Ttl tubulin tyrosine ligase ENCODES a protein that exhibits tubulin-tyrosine ligase activity (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); positive regulation of mitotic cell cycle (ortholog); post-translational protein modification (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN spindle microtubule (ortholog) NW_004955470 1747217 1774512 - 102027289 AGCD01052654;GBDF01280281;XM_005400605;XM_013522827 XP_005400662;XP_013378281 MODEL 8897813 protein-coding LOC102003660 cytochrome P450 2J2-like NW_004955420 23534311 23545670 + 102003660 AGCD01021248;GBDJ01218648;XM_013513341 XP_013368795 MODEL 9023783 protein-coding Serpinb5 serpin family B member 5 INVOLVED IN extracellular matrix organization (ortholog); morphogenesis of an epithelium (ortholog); prostate gland morphogenesis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); Colonic Neoplasms (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); cornified envelope (ortholog) NW_004955402 47248665 47276017 + 102023762 AGCD01001178;GBBH01168613;XM_005373029;XM_013511236;XM_013511239;XM_013511244 XP_005373086;XP_013366690;XP_013366693;XP_013366698 MODEL 8906106 protein-coding Sppl2a signal peptide peptidase like 2A ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); protein homodimerization activity (ortholog); INVOLVED IN membrane protein ectodomain proteolysis (ortholog); membrane protein intracellular domain proteolysis (ortholog); membrane protein proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); Golgi-associated vesicle membrane (ortholog); late endosome (ortholog) NW_004955409 3642113 3670779 + 102027720 AGCD01009258;AGCD01009259;GBCE01054717;XM_013510290 XP_013365744 MODEL 8717299 protein-coding LOC102013922 uncharacterized LOC102013922 NW_004955470 5868613 5875570 + 102013922 AGCD01052761;GBDF01111358;XM_005400752;XM_005400753;XR_263472 XP_005400809;XP_005400810 MODEL 8822131 protein-coding LOC102018942 leukotriene-B4 omega-hydroxylase 3-like NW_004955495 7625004 7636072 - 102018942 AGCD01062154;XM_013505064 XP_013360518 MODEL 8764154 ncrna LOC102004354 uncharacterized LOC102004354 NW_004955455 10577469 10586870 - 102004354 AGCD01045957;AGCD01045958;GBDJ01114127;XR_262852 MODEL 8813071 protein-coding Rps16 ribosomal protein S16 ENCODES a protein that exhibits RNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); liver regeneration (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955468 130244 132258 + 102021749 AGCD01051683;GBDF01002223;XM_005399771 XP_005399828 MODEL 8800706 protein-coding Prr11 proline rich 11 INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955451 3813617 3839521 - 102016335 AGCD01043074;AGCD01043075;GBDJ01400550;XM_005393991;XM_013519224;XM_013519225 XP_005394048;XP_013374678;XP_013374679 MODEL 8776538 protein-coding Lrrc14b leucine rich repeat containing 14B ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955504 9559 13238 + 102016826 AGCD01064813;GBDF01145974;XM_005406982 XP_005407039 MODEL 8930147 protein-coding Shank3 SH3 and multiple ankyrin repeat domains 3 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); identical protein binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN adult behavior (ortholog); AMPA glutamate receptor clustering (ortholog); associative learning (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN ciliary membrane (ortholog); glutamatergic synapse (ortholog); neuron projection (ortholog) NW_004955413 33660025 33714649 + 102015943 AGCD01014686;AGCD01014687;AGCD01014688;GBDI01163328;GBDK01181044;XM_005379674 XP_005379731 MODEL 8866998 pseudo LOC102005051 nucleosome assembly protein 1-like 1 pseudogene NW_004955491 8228056 8233055 + 102005051 AGCD01060610 MODEL 8781238 protein-coding LOC102009182 zinc finger protein 709-like NW_004955483 60152 101435 + 102009182 AGCD01057595;AGCD01057596;AGCD01057597;AGCD01057598;XM_005403269;XM_013503758 XP_005403326;XP_013359212 MODEL 9049552 pseudo LOC102005779 unconventional myosin-Va pseudogene NW_004955459 2117974 2121858 - 102005779 AGCD01047982 MODEL 8888469 protein-coding Espn espin ENCODES a protein that exhibits actin filament binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); locomotory behavior (ortholog); microvillar actin bundle assembly (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 28 (ortholog); autosomal recessive nonsyndromic deafness 36 (ortholog); FOUND IN actin cytoskeleton (ortholog); apical ectoplasmic specialization (ortholog); brush border (ortholog) NW_004955486 6130190 6156859 - 102025585 AGCD01059108;AGCD01059109;GBDF01000176;GBDF01000177;XM_013504283 XP_013359737 MODEL 8785654 pseudo LOC102010330 translationally-controlled tumor protein pseudogene NW_004955452 860898 861359 - 102010330 AGCD01043827 MODEL 8912328 protein-coding Slc4a8 solute carrier family 4 member 8 ENCODES a protein that exhibits bicarbonate transmembrane transporter activity (ortholog); chloride transmembrane transporter activity (ortholog); identical protein binding (ortholog); INVOLVED IN basolateral protein secretion (ortholog); bicarbonate transport (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); asymmetric synapse (ortholog); axon terminus (ortholog) NW_004955547 1896597 1975285 + 102025945 AGCD01072250;AGCD01072251;GBDF01263263;XM_005415404 XP_005415461 MODEL 9039941 protein-coding LOC102018572 uncharacterized protein C2orf78-like NW_004955409 22962231 22969880 + 102018572 AGCD01010049;GBDF01047261;XM_005376894;XM_013510259;XR_001232609 XP_005376951;XP_013365713 MODEL 8768515 protein-coding Ripk1 receptor interacting serine/threonine kinase 1 ENCODES a protein that exhibits death domain binding (ortholog); death receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); apoptotic process (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Abdominal Pain (ortholog); acute myeloid leukemia (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); death-inducing signaling complex (ortholog); mitochondrion (ortholog) NW_004955465 10127907 10167895 - 102016248 AGCD01050502;AGCD01050503;GBDJ01316825;XM_005398899;XM_005398900 XP_005398956;XP_005398957 MODEL 8935420 ncrna LOC102020055 uncharacterized LOC102020055 NW_004955441 8775927 8779401 - 102020055 AGCD01036992;GBDF01067304;XR_262061 MODEL 39133539 snrna U4 U4 spliceosomal RNA 8993516 pseudo LOC102012375 stathmin-2 pseudogene NW_004955568 690849 691813 + 102012375 AGCD01074525;XM_005413457 MODEL 8987948 protein-coding LOC102025087 zinc finger protein 709-like NW_004955407 43049470 43074123 - 102025087 AGCD01007903;AGCD01007904;GBDF01011131;XM_005375955;XM_013505817 XP_005376012;XP_013361271 MODEL 8776154 protein-coding Plau plasminogen activator, urokinase ENCODES a protein that exhibits peptidase activity (ortholog); receptor ligand activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to fluid shear stress (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN fibrinolysis pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH otitis media; Acute Lung Injury (ortholog); adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); protein complex involved in cell-matrix adhesion (ortholog) NW_004955437 17995726 18000542 - 102006955 AGCD01034771;GBBH01166562;XM_005389937 XP_005389994 MODEL 8996557 ncrna LOC102015826 uncharacterized LOC102015826 NW_004955413 16848152 16865614 - 102015826 AGCD01014117;GBCQ01176213;XR_001233041;XR_001233042;XR_260082 MODEL 8776082 protein-coding Wnt10a Wnt family member 10A ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); epidermis morphogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Arthralgia (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); cerebrotendinous xanthomatosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955453 14528373 14540801 - 102030594 AGCD01044868;AGCD01044869;GBDJ01300231;XM_005395620 XP_005395677 MODEL 8946980 ncrna LOC102011963 uncharacterized LOC102011963 NW_004955410 30060160 30071952 - 102011963 AGCD01011301;GBDF01192837;XR_259886 MODEL 9008066 ncrna LOC102021908 uncharacterized LOC102021908 NW_004955433 9978528 10091601 - 102021908 AGCD01031621;AGCD01031622;AGCD01031623;AGCD01031624;GBDF01128236;XR_001234701;XR_261583 MODEL 8823994 protein-coding LOC102008803 vomeronasal type-1 receptor 4-like NW_004955603 30312 31232 - 102008803 AGCD01076804;XM_005414841 XP_005414898 MODEL 9056964 ncrna LOC102007618 uncharacterized LOC102007618 NW_004955452 2440793 2444300 - 102007618 AGCD01043895;GBDK01010271;XR_262640 MODEL 9045929 protein-coding Tent5a terminal nucleotidyltransferase 5A ENCODES a protein that exhibits poly(A) RNA polymerase activity (ortholog); INVOLVED IN positive regulation of bone mineralization (ortholog); positive regulation of osteoblast differentiation (ortholog); regulation of ossification (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); esophageal cancer (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955411 9695149 9701463 - 102009261 AGCD01011764;GBCE01137051;GBDI01218110;XM_005377679 XP_005377736 MODEL 9036126 protein-coding LOC102013536 uncharacterized LOC102013536 NW_004955526 4264331 4315647 - 102013536 AGCD01069364;AGCD01069365;GBDJ01399642;XM_013507356 XP_013362810 MODEL 8754799 protein-coding Rusc1 RUN and SH3 domain containing 1 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN protein polyubiquitination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955545 1765364 1773889 + 102006825 AGCD01071869;GBDK01118008;XM_013508229;XM_013508230;XM_013508231;XM_013508232;XM_013508233 XP_013363683;XP_013363684;XP_013363685;XP_013363686;XP_013363687 MODEL 8907127 protein-coding Pou4f3 POU class 4 homeobox 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN axon extension (ortholog); inner ear auditory receptor cell differentiation (ortholog); inner ear development (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 15 (ortholog); Deafness (ortholog); Hearing Loss (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955415 7777296 7778622 - 102016049 AGCD01016056;XM_005380674 XP_005380731 MODEL 8871679 protein-coding St6galnac2 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 ENCODES a protein that exhibits alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); IgA glomerulonephritis (ortholog); lung squamous cell carcinoma (ortholog) NW_004955506 5720569 5743803 + 102022108 AGCD01065383;AGCD01065384;AGCD01065385;AGCD01065386;GBDJ01075128;XM_005407425;XM_013506078 XP_005407482;XP_013361532 MODEL 8834448 protein-coding Praf2 PRA1 domain family member 2 ASSOCIATED WITH cerebellar hypoplasia (ortholog); Experimental Liver Cirrhosis (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955543 594662 597695 - 102007939 AGCD01071593;GBDF01249477;XM_005411321 XP_005411378 MODEL 8984576 protein-coding LOC102009569 protocadherin-8 NW_004955404 50763263 50767330 + 102009569 AGCD01004536;AGCD01004537;GBDF01044218;XM_005374213;XM_013516742 XP_005374270;XP_013372196 MODEL 8945508 protein-coding Pigk phosphatidylinositol glycan anchor biosynthesis class K ENCODES a protein that exhibits GPI-anchor transamidase activity (ortholog); INVOLVED IN attachment of GPI anchor to protein (ortholog); GPI anchored protein biosynthesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); GPI-anchor transamidase complex (ortholog) NW_004955423 15864320 15970451 + 102029412 AGCD01023817;AGCD01023818;AGCD01023819;AGCD01023820;AGCD01023821;AGCD01023822;GBBH01186058;GBDJ01236342;XM_013514553 XP_013370007 MODEL 8732434 protein-coding Letmd1 LETM1 domain containing 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN ATP biosynthetic process (ortholog); calcium ion homeostasis (ortholog); gene expression (ortholog); ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955547 1574210 1586432 + 102020847 AGCD01072233;GBDK01185833;XM_005411892;XM_013508469;XM_013508470;XM_013508471;XR_001232222;XR_001232223 XP_005411949;XP_013363923;XP_013363924;XP_013363925 MODEL 8751996 protein-coding Serpinb7 serpin family B member 7 INVOLVED IN positive regulation of collagen biosynthetic process (ortholog); positive regulation of glomerular mesangial cell proliferation (ortholog); positive regulation of platelet-derived growth factor production (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Diabetic Nephropathies (ortholog) NW_004955402 47599503 47649537 + 102025961 AGCD01001191;AGCD01001192;GBCC01008982;XM_005373035;XM_013511256 XP_005373092;XP_013366710 MODEL 8814934 protein-coding Trim62 tripartite motif containing 62 ENCODES a protein that exhibits identical protein binding (ortholog); transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); negative regulation of epithelial to mesenchymal transition (ortholog); positive regulation of antifungal innate immune response (ortholog); FOUND IN cytoplasm (ortholog) NW_004955452 11348001 11377413 - 102006865 AGCD01044335;GBCB01025292;XM_005395108 XP_005395165 MODEL 8758203 protein-coding Pnkd PNKD metallo-beta-lactamase domain containing INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); negative regulation of neurotransmitter secretion (ortholog); neuromuscular process controlling posture (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebrotendinous xanthomatosis (ortholog); choreatic disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955453 15030436 15104084 - 102012398 AGCD01044881;AGCD01044882;AGCD01044883;AGCD01044884;AGCD01044885;GBDI01171046;XM_005395654;XM_005395655;XM_005395656;XM_013519933 XP_005395711;XP_005395712;XP_005395713;XP_013375387 MODEL 9058367 ncrna LOC102003306 uncharacterized LOC102003306 NW_004955403 49841723 49842763 + 102003306 AGCD01002951;GBDF01153033;XR_259250 MODEL 8850081 protein-coding Cacna1b calcium voltage-gated channel subunit alpha1 B ENCODES a protein that exhibits high voltage-gated calcium channel activity (ortholog); protein phosphatase 2A binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH absence epilepsy (ortholog); amblyopia (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN basolateral plasma membrane; dendrite; neuron projection terminus NW_004955513 5654915 5823094 + 102019306 AGCD01066980;AGCD01066981;AGCD01066982;AGCD01066983;AGCD01066984;AGCD01066985;AGCD01066986;AGCD01066987;GBDF01025399;GBDF01152901;XM_013506726;XM_013506727;XM_013506728 XP_013362180;XP_013362181;XP_013362182 MODEL 10112130 protein-coding LOC106147542 basic proline-rich protein-like NW_004955579 1380558 1381530 - 106147542 AGCD01075580;XM_013509666 XP_013365120 MODEL 9062220 ncrna LOC102009188 uncharacterized LOC102009188 NW_004955420 29161260 29164099 + 102009188 AGCD01021493;GBDJ01119670;XR_260772 MODEL 9043529 protein-coding Trpm7 transient receptor potential cation channel subfamily M member 7 ENCODES a protein that exhibits actin binding (ortholog); calcium channel activity (ortholog); kinase activity (ortholog); INVOLVED IN actomyosin structure organization (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoma (ortholog); amyotrophic lateral sclerosis type 16 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog); neuronal cell body (ortholog) NW_004955409 3690722 3787139 + 102028060 AGCD01009259;AGCD01009260;GBDF01237858;XM_005376661;XM_005376664;XM_005376665 XP_005376718;XP_005376721;XP_005376722 MODEL 8960992 protein-coding Lrrc15 leucine rich repeat containing 15 ENCODES a protein that exhibits collagen binding (ortholog); fibronectin binding (ortholog); laminin binding (ortholog); INVOLVED IN host-mediated suppression of symbiont invasion (ortholog); negative regulation of protein localization to plasma membrane (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); glutamatergic synapse (ortholog) NW_004955420 14401080 14410277 + 102030318 AGCD01020944;GBDJ01246683;XM_005383195;XM_005383196 XP_005383252;XP_005383253 MODEL 8756380 protein-coding Pstpip1 proline-serine-threonine phosphatase interacting protein 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); protein phosphatase binding (ortholog); ASSOCIATED WITH acne (ortholog); allergic contact dermatitis (ortholog); allergic rhinitis (ortholog); FOUND IN actomyosin contractile ring (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) NW_004955450 1876553 1908269 + 102019551 AGCD01042371;GBDK01231269;XM_005393478;XM_005393479;XM_005393481;XM_013519024 XP_005393535;XP_005393536;XP_005393538;XP_013374478 MODEL 8894665 pseudo LOC102009162 Krueppel-like factor 3 pseudogene NW_004955412 32434354 32435058 - 102009162 AGCD01013355;XR_260036 MODEL 8888891 protein-coding Prr12 proline rich 12 INVOLVED IN intracellular protein localization (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); body dysmorphic disorder (ortholog); FOUND IN nucleus (ortholog); postsynaptic density (ortholog) NW_004955559 1253216 1279414 - 102011703 AGCD01073638;AGCD01073639;GBBH01228692;XM_005412863;XM_013508984 XP_005412920;XP_013364438 MODEL 8792442 protein-coding LOC102011124 olfactory receptor 2K2 NW_004955419 15925491 15926438 + 102011124 AGCD01020094;XM_013513143 XP_013368597 MODEL 8799360 protein-coding Rbm10 RNA binding motif protein 10 ENCODES a protein that exhibits identical protein binding (ortholog); miRNA binding (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cardiac muscle cell myoblast differentiation (ortholog); mRNA stabilization (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955516 904852 934313 - 102022844 AGCD01067404;AGCD01067405;AGCD01067406;GBCE01095320;XM_005408964;XM_005408966;XM_013506926;XM_013506927 XP_005409021;XP_005409023;XP_013362380;XP_013362381 MODEL 9019867 pseudo LOC102010333 U1 small nuclear ribonucleoprotein C pseudogene NW_004955453 8264707 8265255 + 102010333 AGCD01044758;XM_005395715 MODEL 9059308 pseudo LOC102012379 60S ribosomal protein L6-like NW_004955573 953680 960330 - 102012379 AGCD01075010 MODEL 8918972 protein-coding Rexo2 RNA exonuclease 2 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); 3'-5'-RNA exonuclease activity (ortholog); INVOLVED IN mitochondrial RNA surveillance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial matrix (ortholog) NW_004955412 16025304 16035925 + 102013269 AGCD01012891;GBCQ01066636;XM_005378159;XM_005378160 XP_005378216;XP_005378217 MODEL 8864597 protein-coding LOC102003661 starch-binding domain-containing protein 1-like NW_004955421 9799138 9801408 - 102003661 AGCD01021858;XM_013513646 XP_013369100 MODEL 8745432 protein-coding Slc4a9 solute carrier family 4 member 9 ENCODES a protein that exhibits chloride:bicarbonate antiporter activity (ortholog); sodium,bicarbonate:chloride antiporter activity (ortholog); sodium:bicarbonate symporter activity (ortholog); INVOLVED IN monoatomic anion transport (ortholog); saliva secretion (ortholog); sodium ion transmembrane transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); membrane (ortholog) NW_004955418 273383 288675 - 102005141 AGCD01018671;GBBH01001332;XM_013512899;XM_013512900;XM_013512901;XM_013512902;XM_013512903;XR_001233497 XP_013368353;XP_013368354;XP_013368355;XP_013368356;XP_013368357 MODEL 8793311 protein-coding LOC102017758 apolipoprotein L3-like NW_004955413 22826454 22837555 - 102017758 AGCD01014317;GBBH01091386;XM_005379156 XP_005379213 MODEL 9039068 protein-coding Sppl2b signal peptide peptidase like 2B ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); protein homodimerization activity (ortholog); INVOLVED IN membrane protein ectodomain proteolysis (ortholog); membrane protein intracellular domain proteolysis (ortholog); membrane protein proteolysis (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endosome membrane (ortholog); Golgi-associated vesicle membrane (ortholog) NW_004955495 5816979 5829938 - 102013841 AGCD01062035;GBCE01134604;XM_005405903;XM_005405904;XM_013505229;XM_013505231 XP_005405960;XP_005405961;XP_013360683;XP_013360685 MODEL 8986317 ncrna LOC102015834 uncharacterized LOC102015834 NW_004955472 3820469 3824070 + 102015834 AGCD01053522;GBDF01306419;XR_263550 MODEL 8879818 protein-coding Pxdn peroxidasin ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); heme binding (ortholog); laminin-1 binding (ortholog); INVOLVED IN angiogenesis (ortholog); basement membrane assembly (ortholog); basement membrane organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anterior segment dysgenesis (ortholog); anterior segment dysgenesis 7 (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); endoplasmic reticulum (ortholog) NW_004955487 4867427 4936454 + 102021132 AGCD01059317;GBCE01009660;GBCE01009664;XM_005404386;XM_005404387 XP_005404443;XP_005404444 MODEL 8872017 ncrna LOC102004356 uncharacterized LOC102004356 NW_004955408 16637908 16665694 - 102004356 AGCD01008442;GBDF01308085;XR_259690 MODEL 8965912 protein-coding LOC102008396 apolipoprotein L6-like NW_004955413 21987513 22022979 + 102008396 AGCD01014278;AGCD01014279;GBDF01146804;XM_013511275 XP_013366729 MODEL 8824474 protein-coding Spaca1 sperm acrosome associated 1 INVOLVED IN acrosome assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); spermatogenic failure 85 (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog) NW_004955411 14946324 14960901 + 102030397 AGCD01011926;AGCD01011927;GBDF01043494;XM_005377737 XP_005377794 MODEL 8761538 pseudo LOC102018943 60S ribosomal protein L36a-like NW_004955424 12515538 12515906 - 102018943 AGCD01024613;XR_261058 MODEL 8751534 protein-coding Espnl espin like ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN sensory perception of sound (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN stereocilium tip (ortholog) NW_004955542 2430610 2453738 - 102028235 AGCD01071522;GBBH01227849;XM_005411198 XP_005411255 MODEL 8812617 protein-coding Rps17 ribosomal protein S17 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN erythrocyte homeostasis (ortholog); ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 4 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic ribosome (ortholog) NW_004955416 14039596 14042908 + 102008847 AGCD01017241;GBDF01003664;XM_005381484 XP_005381541 MODEL 9035358 protein-coding Fev FEV transcription factor, ETS family member ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN maternal behavior (ortholog); neuron fate specification (ortholog); neuron maturation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cerebrotendinous xanthomatosis (ortholog); Myocardial Ischemia (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955453 14449352 14453145 + 102013582 AGCD01044864;AGCD01044865;XM_005395719 XP_005395776 MODEL 8993979 protein-coding LOC102007626 keratin-associated protein 20-1-like NW_004955407 30169411 30169593 + 102007626 AGCD01007628;XM_005375642 XP_005375699 MODEL 9006213 protein-coding Disp3 dispatched RND transporter family member 3 INVOLVED IN negative regulation of neuron differentiation (ortholog); positive regulation of lipid metabolic process (ortholog); positive regulation of neural precursor cell proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955486 2290413 2335193 - 102010164 AGCD01058995;GBDJ01220566;XM_005404001 XP_005404058 MODEL 8909719 pseudo LOC102013537 coiled-coil domain-containing protein 90B, mitochondrial pseudogene NW_004955533 59109 60126 - 102013537 AGCD01070311 MODEL 8912503 pseudo LOC102005056 cullin-4B pseudogene NW_004955422 28787889 28796918 + 102005056 AGCD01023368;AGCD01023369;AGCD01023370 MODEL 8758181 protein-coding Rusc2 RUN and SH3 domain containing 2 ENCODES a protein that exhibits small GTPase binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 61 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) NW_004955472 698021 742966 - 102011981 AGCD01053351;AGCD01053352;AGCD01053353;AGCD01053354;GBBH01088464;GBDI01256209;XM_013522959 XP_013378413 MODEL 8884892 pseudo LOC102018574 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like NW_004955409 28949729 28974461 - 102018574 AGCD01010248;AGCD01010249 MODEL 8938520 protein-coding LOC102025089 olfactory receptor 9-like NW_004955458 3200530 3201468 - 102025089 AGCD01047278;XM_013520865 XP_013376319 MODEL 8760110 protein-coding St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 ENCODES a protein that exhibits sialyltransferase activity (ortholog); INVOLVED IN glycoprotein metabolic process (ortholog); glycosphingolipid metabolic process (ortholog); glycosylceramide metabolic process (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955423 16405309 16916163 - 102022828 AGCD01023831;AGCD01023832;AGCD01023833;AGCD01023834;AGCD01023835;AGCD01023836;AGCD01023837;AGCD01023838;AGCD01023839;AGCD01023840;AGCD01023841;AGCD01023842;GBCQ01129879;XM_005385223;XM_013514532;XM_013514533;XM_013514534 XP_005385280;XP_013369986;XP_013369987;XP_013369988 MODEL 8888727 protein-coding Shh sonic hedgehog signaling molecule ENCODES a protein that exhibits calcium ion binding (ortholog); cholesterol-protein transferase activity (ortholog); endopeptidase activity (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); androgen metabolic process (ortholog); angiogenesis (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; forkhead class A signaling pathway; glypican signaling pathway; ASSOCIATED WITH acrocallosal syndrome (ortholog); Agenesis of Corpus Callosum (ortholog); anemia (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); dendrite (ortholog) NW_004955491 8647133 8657381 - 102007024 AGCD01060619;AGCD01060620;GBCQ01149994;GBDK01027253;XM_013504572 XP_013360026 MODEL 8951489 pseudo LOC102013930 uncharacterized LOC102013930 NW_004955415 31555747 31559936 + 102013930 AGCD01016683 MODEL 8971678 protein-coding Wnt10b Wnt family member 10B INVOLVED IN bone trabecula formation (ortholog); canonical Wnt signaling pathway (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); genetic disease (ortholog); Neoplasm Recurrence, Local (ortholog); FOUND IN extracellular region (ortholog) NW_004955500 7782782 7800281 - 102010818 AGCD01063946;AGCD01063947;AGCD01063948;GBDI01165157;XM_005406675;XM_005406676;XM_005406677;XM_005406678;XM_005406679;XM_013505648 XP_005406732;XP_005406733;XP_005406734;XP_005406735;XP_005406736;XP_013361102 MODEL 8747724 protein-coding Plaur plasminogen activator, urokinase receptor ENCODES a protein that exhibits cell-matrix adhesion mediator activity (ortholog); enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); epithelial cell differentiation involved in prostate gland development (ortholog); mesenchymal cell differentiation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol-associated liver disease (ortholog); autistic disorder (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); protein complex involved in cell-matrix adhesion (ortholog) NW_004955555 1378505 1393395 - 102017395 AGCD01073075;AGCD01073076;AGCD01073077;GBCE01155133;GBCQ01139720;XM_013508758 XP_013364212 MODEL 9055627 pseudo LOC102009574 40S ribosomal protein S12 pseudogene NW_004955406 11910786 11911430 - 102009574 AGCD01005898 MODEL 8851048 protein-coding LOC102021909 TIP41-like protein NW_004955433 23172811 23173440 + 102021909 AGCD01031954;XM_013516111 XP_013371565 MODEL 8741246 protein-coding Sharpin SHANK associated RH domain interactor ENCODES a protein that exhibits identical protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN apoptotic nuclear changes (ortholog); defense response to bacterium (ortholog); epidermis development (ortholog); PARTICIPATES IN integrin mediated signaling pathway; nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH atopic dermatitis (ortholog); AUTOINFLAMMATION WITH EPISODIC FEVER AND IMMUNE DYSREGULATION (ortholog); dermatitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955454 2761725 2765929 - 102025652 AGCD01045033;GBDK01082298;XM_005395857;XR_001236235 XP_005395914 MODEL 39133540 snrna U4 U4 spliceosomal RNA 8884978 pseudo LOC102020070 ubiquitin carboxyl-terminal hydrolase isozyme L5 pseudogene NW_004955593 95196 95813 - 102020070 AGCD01076350 MODEL 8953506 protein-coding LOC102007627 ral guanine nucleotide dissociation stimulator-like NW_004955407 35377264 35380004 - 102007627 AGCD01007740;GBDF01084243;XM_005375725;XM_013504566 XP_005375782;XP_013360020 MODEL 8727457 protein-coding Ripk2 receptor interacting serine/threonine kinase 2 ENCODES a protein that exhibits CARD domain binding (ortholog); caspase binding (ortholog); identical protein binding (ortholog); INVOLVED IN adaptive immune response (ortholog); apoptotic process (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog) NW_004955417 6669675 6698142 + 102008942 AGCD01017988;GBCE01045721;GBDI01182180;XM_013512753 XP_013368207 MODEL 8991500 protein-coding LOC102009190 uncharacterized LOC102009190 NW_004955420 26585304 26590726 - 102009190 AGCD01021418;GBBH01189737;XM_013513347 XP_013368801 MODEL 8700081 protein-coding Cacna1c calcium voltage-gated channel subunit alpha1 C ENCODES a protein that exhibits alpha-actinin binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN adult walking behavior (ortholog); axon development (ortholog); calcium ion import (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute stress disorder (ortholog); alcohol dependence (ortholog); FOUND IN axon cytoplasm; basal pole of outer hair cell; basolateral plasma membrane NW_004955454 4573647 5199046 + 102026943 AGCD01045125;AGCD01045126;AGCD01045127;AGCD01045128;AGCD01045129;AGCD01045130;AGCD01045131;AGCD01045132;GBCE01065707;XM_005395963;XM_013520117;XM_013520118;XM_013520119;XM_013520120;XM_013520121;XM_013520122;XM_013520123;XM_013520124;XM_013520125;XM_013520126;XM_013520127;XM_013520128;XM_013520129 XP_005396020;XP_013375571;XP_013375572;XP_013375573;XP_013375574;XP_013375575;XP_013375576;XP_013375577;XP_013375578;XP_013375579;XP_013375580;XP_013375581;XP_013375582;XP_013375583 MODEL 8912857 protein-coding Ttll1 TTL family tubulin polyglutamylase complex subunit L1 ENCODES a protein that exhibits tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN axoneme assembly (ortholog); cerebellar Purkinje cell differentiation (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN ciliary basal body (ortholog); microtubule (ortholog) NW_004955413 28234964 28250899 - 102014881 AGCD01014554;GBCB01061257;XM_005379432;XM_013511690 XP_005379489;XP_013367144 MODEL 9048933 protein-coding Pstpip2 proline-serine-threonine phosphatase interacting protein 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoskeleton (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955402 31538335 31637901 - 102027028 AGCD01000790;AGCD01000791;AGCD01000792;AGCD01000793;AGCD01000794;AGCD01000795;AGCD01000796;AGCD01000797;AGCD01000798;AGCD01000799;AGCD01000800;GBDJ01042045;XM_005372863;XM_013510408 XP_005372920;XP_013365862 MODEL 153211027 protein-coding IGLV3-1 immunoglobulin lambda variable 3-1 8971957 protein-coding Prr13 proline rich 13 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955458 730805 735528 + 102021208 AGCD01047151;AGCD01047152;GBDF01003931;XM_005397178 XP_005397235 MODEL 9026532 protein-coding Pigl phosphatidylinositol glycan anchor biosynthesis class L ENCODES a protein that exhibits N-acetylglucosaminylphosphatidylinositol deacetylase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH CHIME syndrome (ortholog); cleft palate (ortholog); Cognitive Dysfunction (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955467 1566494 1645158 + 102015493 AGCD01051267;AGCD01051268;AGCD01051269;AGCD01051270;AGCD01051271;GBDF01305356;XM_013522032 XP_013377486 MODEL 8786469 protein-coding Prag1 PEAK1 related, kinase-activating pseudokinase 1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell migration (ortholog); negative regulation of neuron projection development (ortholog); positive regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); nucleus (ortholog) NW_004955463 4397246 4446696 - 102016357 AGCD01049605;GBDI01181338;GBDJ01076008;XM_005398353 XP_005398410 MODEL 8730997 pseudo LOC102015844 60S ribosomal protein L4 pseudogene NW_004955418 30566655 30589110 - 102015844 AGCD01019529;AGCD01019530;AGCD01019531;AGCD01019532;AGCD01019533;AGCD01019534 MODEL 8704858 protein-coding Serpinb8 serpin family B member 8 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN epithelial cell-cell adhesion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955402 47761900 47781281 + 102026819 AGCD01001193;GBDJ01355314;XM_005373037;XM_005373038;XM_005373039;XM_013511271 XP_005373094;XP_005373095;XP_005373096;XP_013366725 MODEL 8965483 protein-coding Pnkp polynucleotide kinase 3'-phosphatase ENCODES a protein that exhibits ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity (ortholog); polynucleotide 3'-phosphatase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via nonhomologous end joining (ortholog); positive regulation of double-strand break repair via nonhomologous end joining (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); Ataxia (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955559 1064924 1070120 + 102018779 AGCD01073627;AGCD01073628;GBCB01005335;GBCQ01040513;XM_013508947 XP_013364401 MODEL 8899223 protein-coding Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase ENCODES a protein that exhibits O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN compartment pattern specification (ortholog); marginal zone B cell differentiation (ortholog); negative regulation of Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955460 12773975 12784512 - 102014752 AGCD01048664;GBCE01075163;XM_005397874 XP_005397931 MODEL 8765746 protein-coding LOC102013933 schlafen family member 12-like NW_004955481 9985188 10014736 + 102013933 AGCD01057130;AGCD01057131;AGCD01057132;GBBH01068824;XM_013503415;XM_013503416 XP_013358869;XP_013358870 MODEL 8730016 protein-coding Spaca3 sperm acrosome associated 3 ENCODES a protein that exhibits lysozyme activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); sperm-egg recognition (ortholog); ASSOCIATED WITH melanoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN acrosomal matrix (ortholog); acrosomal membrane (ortholog); acrosomal vesicle (ortholog) NW_004955481 7832518 7840130 + 102028859 AGCD01057078;GBDF01008490;XM_005402831;XM_005402832;XM_005402833 XP_005402888;XP_005402889;XP_005402890 MODEL 8752356 protein-coding Trim63 tripartite motif containing 63 ENCODES a protein that exhibits titin binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); muscle contraction (ortholog); myotube cell development (ortholog); ASSOCIATED WITH Atrophy (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN contractile muscle fiber (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955452 5517969 5531490 - 102012601 AGCD01044038;AGCD01044039;GBDI01181650;XM_005394841 XP_005394898 MODEL 8821564 protein-coding Fez1 fasciculation and elongation protein zeta 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); establishment of cell polarity (ortholog); establishment of mitochondrion localization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN axon (ortholog); cell projection (ortholog); centrosome (ortholog) NW_004955412 26477995 26530686 - 102020643 AGCD01013190;AGCD01013191;AGCD01013192;GBDJ01029328;XM_005378460;XM_013511169;XM_013511170 XP_005378517;XP_013366623;XP_013366624 MODEL 8830969 protein-coding Pou5f1 POU class 5 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN blastocyst development (ortholog); blastocyst growth (ortholog); BMP signaling pathway (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); Carcinogenesis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955583 995707 1003202 - 102026057 AGCD01075876;GBDF01041047;XM_005414337;XM_013509821;XM_013509822 XP_005414394;XP_013365275;XP_013365276 MODEL 8760570 protein-coding Lrrc17 leucine rich repeat containing 17 INVOLVED IN bone marrow development (ortholog); negative regulation of osteoclast differentiation (ortholog); osteoblast differentiation (ortholog); FOUND IN extracellular region (ortholog) NW_004955410 8093621 8128623 + 102013149 AGCD01010733;GBCE01096496;XM_005377215;XM_013510520 XP_005377272;XP_013365974 MODEL 10113391 ncrna LOC106147543 uncharacterized LOC106147543 NW_004955579 94420 109069 + 106147543 AGCD01075534;GBDK01178872;XR_001232468 MODEL 9032967 protein-coding LOC102009166 TRIO and F-actin-binding protein-like NW_004955413 24091962 24110422 + 102009166 AGCD01014347;AGCD01014348;XM_013511302 XP_013366756 MODEL 39132361 snrna U6 U6 spliceosomal RNA 9027228 ncrna LOC102010334 uncharacterized LOC102010334 NW_004955406 19328963 19363689 - 102010334 AGCD01006077;GBDF01119607;XR_001236563;XR_001236565;XR_001236566;XR_001236567;XR_001236568;XR_001236569 MODEL 8828720 protein-coding Rbm11 RNA binding motif protein 11 ENCODES a protein that exhibits poly(U) RNA binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 16071186 16082332 + 102006210 AGCD01007205;GBDF01252713;XM_005375561 XP_005375618 MODEL 8789403 pseudo LOC102017760 ribosome production factor 2 homolog pseudogene NW_004955414 220864 222594 + 102017760 AGCD01014711 MODEL 9066994 protein-coding Rexo4 REX4 homolog, 3'-5' exonuclease ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); double-stranded DNA binding (ortholog); endonuclease activity (ortholog); INVOLVED IN DNA catabolic process (ortholog); DNA repair (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); stomach cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955513 2745220 2754927 - 102015878 AGCD01066888;GBBH01077836;XM_005408440;XM_005408443;XM_005408444;XM_005408445 XP_005408497;XP_005408500;XP_005408501;XP_005408502 MODEL 8927793 protein-coding Slc50a1 solute carrier family 50 member 1 ENCODES a protein that exhibits glucoside transmembrane transporter activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN endomembrane system (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955545 1617725 1620804 + 102026355 AGCD01071863;GBCQ01141801;XM_005411573;XM_005411574;XM_005411575;XM_013508366;XM_013508367 XP_005411630;XP_005411631;XP_005411632;XP_013363820;XP_013363821 MODEL 8930749 protein-coding St6galnac4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 NW_004955419 756768 764897 + 102022818 AGCD01019608;GBDJ01174526;XM_005382398 XP_005382455 MODEL 8712490 pseudo LOC102004357 transcription elongation factor SPT4-A-like NW_004955457 12370358 12370718 + 102004357 AGCD01047009 MODEL 8956902 protein-coding Shisa2 shisa family member 2 INVOLVED IN negative regulation of fibroblast growth factor receptor signaling pathway (ortholog); negative regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955497 5453682 5459680 - 102024702 AGCD01062593;GBCE01134715;GBDK01235162;XM_005406336 XP_005406393 MODEL 8707196 pseudo LOC102008404 RNA-binding protein with serine-rich domain 1 pseudogene NW_004955415 22507523 22528364 - 102008404 AGCD01016538;AGCD01016539 MODEL 9025720 protein-coding LOC102009577 keratin-associated protein 20-2-like NW_004955407 30220342 30220545 + 102009577 AGCD01007628;XM_005375648 XP_005375705 MODEL 8720601 pseudo LOC102018945 LIM domain only protein 3 pseudogene NW_004955498 2522907 2523749 + 102018945 AGCD01062802 MODEL 8827095 protein-coding Pxdnl peroxidasin like ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955454 10993294 11442351 - 102003091 AGCD01045376;AGCD01045377;AGCD01045378;AGCD01045379;AGCD01045380;AGCD01045381;AGCD01045382;AGCD01045383;AGCD01045384;AGCD01045385;AGCD01045386;AGCD01045387;AGCD01045388;GBDI01306602;XM_013520015 XP_013375469 MODEL 8988136 pseudo LOC102003307 uncharacterized protein C12orf31 homolog pseudogene NW_004955451 1129592 1137451 - 102003307 AGCD01042960 MODEL 8705385 protein-coding LOC102021910 olfactory receptor 10C1-like NW_004955524 278339 279310 + 102021910 AGCD01068674;XM_005409658 XP_005409715 MODEL 8989561 protein-coding Dixdc1 DIX domain containing 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell proliferation in forebrain (ortholog); cerebellar cortex development (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955412 13640693 13713926 + 102021643 AGCD01012843;AGCD01012844;GBDK01318184;XM_005378089;XM_005378092;XM_005378093;XM_005378094;XM_013511056;XM_013511057;XM_013511058;XM_013511059 XP_005378146;XP_005378149;XP_005378150;XP_005378151;XP_013366510;XP_013366511;XP_013366512;XP_013366513 MODEL 8878773 protein-coding LOC102012761 peroxisomal bifunctional enzyme-like NW_004955420 22249148 22292098 + 102012761 AGCD01021191;AGCD01021192;AGCD01021193;GBBH01217378;XM_005383300 XP_005383357 MODEL 8925291 protein-coding Tmtc2 transmembrane O-mannosyltransferase targeting cadherins 2 ENCODES a protein that exhibits dolichyl-phosphate-mannose-protein mannosyltransferase activity (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955405 20969836 21357939 + 102030493 AGCD01005065;AGCD01005066;AGCD01005067;GBDJ01031233;XM_005374399 XP_005374456 MODEL 8990611 protein-coding Trpm8 transient receptor potential cation channel subfamily M member 8 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH asthma (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) NW_004955453 2185534 2265261 - 102004035 AGCD01044623;AGCD01044624;GBDF01103492;XM_005395332 XP_005395389 MODEL 8711177 pseudo LOC102012383 zinc finger protein 132-like NW_004955584 1075427 1081804 - 102012383 AGCD01075978;XR_265112;XR_265113 MODEL 8882146 protein-coding LOC102018575 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955460 9790084 9814789 - 102018575 AGCD01048552;AGCD01048553;AGCD01048554;AGCD01048555;GBBH01072462;GBDJ01273101;XM_013521140 XP_013376594 MODEL 8747352 protein-coding Cacna1d calcium voltage-gated channel subunit alpha1 D ENCODES a protein that exhibits alpha-actinin binding (ortholog); ankyrin binding (ortholog); calcium channel activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; insulin secretion pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoma (ortholog); Alcohol Withdrawal Seizures (ortholog); FOUND IN basolateral plasma membrane; dendrite; neuron projection terminus NW_004955430 3450151 3796983 + 102030453 AGCD01029217;AGCD01029218;AGCD01029219;AGCD01029220;AGCD01029221;AGCD01029222;AGCD01029223;GBCE01065714;XM_005387368;XM_005387369;XM_005387371;XM_005387372;XM_005387373;XM_013515605;XM_013515606;XM_013515607;XM_013515608;XM_013515609 XP_005387425;XP_005387426;XP_005387428;XP_005387429;XP_005387430;XP_013371059;XP_013371060;XP_013371061;XP_013371062;XP_013371063 MODEL 8973198 protein-coding Sppl2c signal peptide peptidase like 2C ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); aspartic-type endopeptidase activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN acrosome assembly (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog); lumenal side of endoplasmic reticulum membrane (ortholog) NW_004955478 10368379 10370624 - 102015632 AGCD01056132;GBDF01008849;XM_005402268 XP_005402325 MODEL 8904349 protein-coding Tent5b terminal nucleotidyltransferase 5B ENCODES a protein that exhibits poly(A) RNA polymerase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of cell cycle (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955452 6345152 6353479 - 102028154 AGCD01044106;GBCE01016396;XM_005394894 XP_005394951 MODEL 8809253 protein-coding Prr14 proline rich 14 ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome (ortholog); nuclear lamina (ortholog); nucleoplasm (ortholog) NW_004955493 7512420 7518310 + 102016718 AGCD01061196;GBDF01043185;XM_005405264;XM_005405266;XM_013504762 XP_005405321;XP_005405323;XP_013360216 MODEL 9050151 protein-coding Rps18 ribosomal protein S18 ENCODES a protein that exhibits protein kinase binding (ortholog); structural constituent of ribosome (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) NW_004955437 1833338 1838776 + 102029442 AGCD01034238;GBDF01003244;XM_005389479;XM_005389480 XP_005389536;XP_005389537 MODEL 39131411 protein-coding PIGL phosphatidylinositol glycan anchor biosynthesis class L 9034222 protein-coding Esr1 estrogen receptor 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATPase binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN androgen metabolic process (ortholog); antral ovarian follicle growth (ortholog); baculum development (ortholog); PARTICIPATES IN bisphenol A response pathway; estrogen signaling pathway; follicle-stimulating hormone signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); euchromatin (ortholog) NW_004955439 9588631 9953606 - 102028019 AGCD01035840;AGCD01035841;AGCD01035842;AGCD01035843;AGCD01035844;AGCD01035845;AGCD01035846;GBCB01061195;XM_005390573;XM_005390574;XM_013517315 XP_005390630;XP_005390631;XP_013372769 MODEL 8943123 protein-coding Shb SH2 domain containing adaptor protein B ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); signaling receptor complex adaptor activity (ortholog); INVOLVED IN B cell proliferation (ortholog); blood vessel development (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH lung cancer (ortholog); lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955419 28423354 28555948 + 102027856 AGCD01020464;AGCD01020465;GBCQ01070022;GBDJ01352611;XM_005382857 XP_005382914 MODEL 39133541 snrna U4 U4 spliceosomal RNA 8970101 protein-coding Serpinc1 serpin family C member 1 ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); lactation (ortholog); response to nutrient (ortholog); PARTICIPATES IN coagulation cascade pathway; enoxaparin pharmacodynamics pathway; fondaparinux pharmacodynamics pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); FOUND IN extracellular region (ortholog) NW_004955406 14024183 14036206 - 102008913 AGCD01005956;GBDK01194209;XM_005374876 XP_005374933 MODEL 8789204 ncrna LOC102009200 uncharacterized LOC102009200 NW_004955505 3088445 3096275 + 102009200 AGCD01065015;GBDF01203512;XR_264305 MODEL 8893694 protein-coding Lgals1 galectin 1 ENCODES a protein that exhibits carbohydrate binding (ortholog); identical protein binding (ortholog); lactose binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); cellular response to glucose stimulus (ortholog); maintenance of protein location (ortholog); ASSOCIATED WITH B-cell lymphoma (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955413 24072086 24075452 + 102008302 AGCD01014347;GBDJ01022968;XM_005379217;XM_005379218;XM_005379219;XM_005379220 XP_005379274;XP_005379275;XP_005379276;XP_005379277 MODEL 8810179 ncrna LOC102025091 uncharacterized LOC102025091 NW_004955409 24554548 24560508 + 102025091 AGCD01010087;GBDF01074865;XR_001232659;XR_259792 MODEL 8727158 protein-coding Ripk3 receptor interacting serine/threonine kinase 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN amyloid fibril formation (ortholog); cellular response to hydrogen peroxide (ortholog); defense response to virus (ortholog); ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); avian influenza (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955409 35961604 35965477 + 102028620 AGCD01010437;GBDF01271691;XM_005377007;XM_005377010;XM_013510393;XM_013510394;XM_013510395;XM_013510396 XP_005377064;XP_005377067;XP_013365847;XP_013365848;XP_013365849;XP_013365850 MODEL 8928345 protein-coding Ttll10 tubulin tyrosine ligase like 10 ENCODES a protein that exhibits protein-glycine ligase activity (ortholog); protein-glycine ligase activity, elongating (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); microtubule cytoskeleton (ortholog) NW_004955486 9576174 9589297 - 102029519 AGCD01059191;AGCD01059192;GBBH01140468;GBDI01224711;XM_013504222 XP_013359676 MODEL 39131436 protein-coding IGLV9-49 immunoglobulin lambda variable 9-49 9024105 protein-coding Plb1 phospholipase B1 ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); retinyl-palmitate esterase activity (ortholog); INVOLVED IN diacylglycerol catabolic process (ortholog); phosphatidylcholine catabolic process (ortholog); phosphatidylethanolamine catabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog) NW_004955469 10370646 10511263 + 102013161 AGCD01052532;AGCD01052533;AGCD01052534;AGCD01052535;GBBH01117765;XM_005400528;XM_005400529;XM_005400530;XM_013522646;XM_013522647;XM_013522648;XM_013522649;XM_013522650;XM_013522651;XM_013522652 XP_005400585;XP_005400586;XP_005400587;XP_013378100;XP_013378101;XP_013378102;XP_013378103;XP_013378104;XP_013378105;XP_013378106 MODEL 9064812 protein-coding Wnt11 Wnt family member 11 ENCODES a protein that exhibits protein kinase activator activity (ortholog); INVOLVED IN adrenal gland development (ortholog); artery morphogenesis (ortholog); atrial septum development (ortholog); PARTICIPATES IN the Wnt/calcium signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); Animal Disease Models (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955414 15674478 15694758 + 102020902 AGCD01015187;AGCD01015188;GBDK01241149;XM_005379875;XM_005379876;XM_013512079 XP_005379932;XP_005379933;XP_013367533 MODEL 8957402 protein-coding LOC102017764 olfactory receptor 51E2 NW_004955414 20281445 20282910 - 102017764 AGCD01015367;XM_005380055 XP_005380112 MODEL 8764333 protein-coding Pram1 PML-RARA regulated adaptor molecule 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN integrin-mediated signaling pathway (ortholog); regulation of neutrophil degranulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955563 924365 933198 + 102011059 AGCD01074097;GBDJ01338971;XM_005413115;XM_005413116;XM_005413117;XM_005413118 XP_005413172;XP_005413173;XP_005413174;XP_005413175 MODEL 8898874 ncrna LOC102003310 uncharacterized LOC102003310 NW_004955453 2086507 2095184 - 102003310 AGCD01044622;GBDF01223525;XR_001236135;XR_001236136;XR_001236137 MODEL 8848310 protein-coding LOC102015848 thioredoxin domain-containing protein 8 NW_004955419 16801943 16838029 + 102015848 AGCD01020125;AGCD01020126;GBDF01087312;XM_005382742;XM_005382743;XM_005382745;XM_013513287;XR_260636;XR_260637 XP_005382799;XP_005382800;XP_005382802;XP_013368741 MODEL 9066181 ncrna LOC102007630 uncharacterized LOC102007630 NW_004955457 12213711 12215439 + 102007630 AGCD01047004;GBCQ01183768;XR_262943 MODEL 9037829 pseudo LOC102020074 zinc finger and BTB domain-containing protein 44-like NW_004955403 32030333 32210833 + 102020074 AGCD01002425;AGCD01002426;AGCD01002427;AGCD01002428;AGCD01002429;AGCD01002430;AGCD01002431;AGCD01002432 MODEL 8990779 protein-coding Spaca4 sperm acrosome associated 4 INVOLVED IN binding of sperm to zona pellucida (ortholog); fertilization (ortholog); FOUND IN acrosomal vesicle (ortholog); inner acrosomal membrane (ortholog); outer acrosomal membrane (ortholog) NW_004955559 1937747 1938789 - 102008901 AGCD01073682;GBDF01009196;XM_005412948 XP_005413005 MODEL 8907702 protein-coding LOC102013935 putative olfactory receptor 14L1 NW_004955418 30381369 30382328 + 102013935 AGCD01019515;XM_005382374 XP_005382431 MODEL 8939181 protein-coding Fez2 fasciculation and elongation protein zeta 2 INVOLVED IN negative regulation of autophagosome assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955441 4421936 4456070 - 102027790 AGCD01036839;GBCQ01095795;GBDJ01316168;XM_013517614;XM_013517615 XP_013373068;XP_013373069 MODEL 8709255 protein-coding Trim65 tripartite motif containing 65 ENCODES a protein that exhibits protein domain specific binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of NLRP3 inflammasome complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955506 6362360 6366743 + 102010076 AGCD01065413;AGCD01065414;GBCE01065169;GBDI01290894;XM_013506003 XP_013361457 MODEL 10266648 ncrna LOC106147544 uncharacterized LOC106147544 NW_004955579 268741 270811 + 106147544 AGCD01075542;GBDF01147257;XR_001232469 MODEL 8762735 protein-coding Lrrc18 leucine rich repeat containing 18 NW_004955556 1213871 1237281 + 102005975 AGCD01073187;AGCD01073188;AGCD01073189;AGCD01073190;GBDF01010139;XM_005412580;XM_005412581;XM_005412582;XM_005412583;XM_005412584;XM_005412586 XP_005412637;XP_005412638;XP_005412639;XP_005412640;XP_005412641;XP_005412643 MODEL 8763602 pseudo LOC102010338 uncharacterized protein C3orf38 homolog pseudogene NW_004955456 8222073 8223194 - 102010338 AGCD01046462 MODEL 8944602 protein-coding Ptafr platelet activating factor receptor ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); lipopolysaccharide immune receptor activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN cellular response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine (ortholog); cellular response to cAMP (ortholog); cellular response to fatty acid (ortholog); ASSOCIATED WITH Otitis Media with Effusion; Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); FOUND IN plasma membrane (ortholog) NW_004955452 7309854 7345579 - 102012825 AGCD01044144;AGCD01044145;GBCE01013423;XM_005394941;XM_013519732;XM_013519733 XP_005394998;XP_013375186;XP_013375187 MODEL 39132362 snrna U6 U6 spliceosomal RNA 8824623 protein-coding Pxt1 peroxisomal testis enriched protein 1 INVOLVED IN positive regulation of apoptotic process (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog); peroxisome (ortholog) NW_004955437 4096740 4105794 - 102009986 AGCD01034360;GBDF01177457;XM_005389592;XM_005389593 XP_005389649;XP_005389650 MODEL 8933198 ncrna LOC102009168 uncharacterized LOC102009168 NW_004955471 210298 228033 - 102009168 AGCD01052952;GBDF01209473;XR_263509 MODEL 9038850 ncrna LOC102004359 uncharacterized LOC102004359 NW_004955409 13531193 13534835 + 102004359 AGCD01009612;GBDF01214064;XR_259783 MODEL 39131396 protein-coding ST6GALNAC5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 8833983 pseudo LOC102018946 40S ribosomal protein S16-like NW_004955424 2059622 2060278 + 102018946 AGCD01024262 MODEL 8997881 protein-coding LOC102005068 olfactory receptor 8K3-like NW_004955511 1446139 1447077 + 102005068 AGCD01066367;XM_005407961 XP_005408018 MODEL 8748986 protein-coding Cacna1e calcium voltage-gated channel subunit alpha1 E ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels (ortholog); voltage-gated monoatomic cation channel activity (ortholog); INVOLVED IN behavioral fear response (ortholog); behavioral response to pain (ortholog); calcium ion import (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Adducted Thumbs Syndrome (ortholog); arthrogryposis multiplex congenita (ortholog); autistic disorder (ortholog); FOUND IN neuronal cell body; GABA-ergic synapse (ortholog); perikaryon (ortholog) NW_004955406 20356564 20824679 + 102014412 AGCD01006105;AGCD01006106;AGCD01006107;AGCD01006108;GBDF01106809;XM_005374993;XM_013521375;XM_013521381;XM_013521387;XM_013521398;XM_013521405;XM_013521412 XP_005375050;XP_013376829;XP_013376835;XP_013376841;XP_013376852;XP_013376859;XP_013376866 MODEL 8919912 protein-coding Pou5f2 POU domain class 5, transcription factor 2 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog) NW_004955418 18493622 18494871 + 102020667 AGCD01019168;GBDF01005065;XM_005382262 XP_005382319 MODEL 8845591 protein-coding Rps19 ribosomal protein S19 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); identical protein binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); erythrocyte differentiation (ortholog); maturation of SSU-rRNA (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955555 969345 976122 - 102009324 AGCD01073054;GBDF01006254;XM_005412419;XM_013508719 XP_005412476;XP_013364173 MODEL 9027751 ncrna LOC102012771 uncharacterized LOC102012771 NW_004955422 26067668 26092884 - 102012771 AGCD01023274;AGCD01023275;GBDI01368464;XR_260916 MODEL 8965871 protein-coding Pxk PX domain containing serine/threonine kinase like INVOLVED IN inflammatory response (ortholog); modulation of chemical synaptic transmission (ortholog); negative regulation of monoatomic ion transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955430 1714208 1780674 - 102008133 AGCD01029132;AGCD01029133;GBCB01056666;XM_005387294;XM_005387295;XM_013515643;XM_013515644;XM_013515645;XM_013515646;XM_013515647;XM_013515648;XM_013515649 XP_005387351;XP_005387352;XP_013371097;XP_013371098;XP_013371099;XP_013371100;XP_013371101;XP_013371102;XP_013371103 MODEL 8974572 protein-coding Esr2 estrogen receptor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); INVOLVED IN amygdala development (ortholog); behavioral fear response (ortholog); brain development (ortholog); PARTICIPATES IN bisphenol A response pathway; estrogen signaling pathway; tamoxifen pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); adenoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); neuronal cell body (ortholog) NW_004955466 5587003 5644765 + 102004260 AGCD01050885;GBDF01079691;XM_005399136;XM_013521918 XP_005399193;XP_013377372 MODEL 8742760 protein-coding Dkc1 dyskerin pseudouridine synthase 1 ENCODES a protein that exhibits box H/ACA snoRNA binding (ortholog); pseudouridine synthase activity (ortholog); RNA binding (ortholog); INVOLVED IN box H/ACA sno(s)RNA metabolic process (ortholog); enzyme-directed rRNA pseudouridine synthesis (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH anemia (ortholog); aplastic anemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN box H/ACA snoRNP complex (ortholog); box H/ACA telomerase RNP complex (ortholog); Cajal body (ortholog) NW_004955594 846997 857255 - 102006409 AGCD01076444;AGCD01076445;GBCE01187676;GBDJ01233070;XM_013509993 XP_013365447 MODEL 9015898 protein-coding Serpind1 serpin family D member 1 ASSOCIATED WITH carotid artery thrombosis (ortholog); disease by infectious agent (ortholog); heparin cofactor II deficiency (ortholog) NW_004955442 19525411 19537986 - 102025297 AGCD01038066;AGCD01081646;GBDK01094174;XM_005391835 XP_005391892 MODEL 8872307 pseudo LOC102018577 cold shock domain-containing protein E1-like NW_004955411 12520079 12522603 + 102018577 AGCD01011850 MODEL 9066958 protein-coding Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 ENCODES a protein that exhibits dolichyl-phosphate-mannose-protein mannosyltransferase activity (ortholog); INVOLVED IN bud outgrowth involved in lung branching (ortholog); cell differentiation (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955405 25607134 25646050 + 102011621 AGCD01005177;GBCE01127255;XM_005374428;XM_013518135;XM_013518136 XP_005374485;XP_013373589;XP_013373590 MODEL 8874428 protein-coding Rusf1 RUS family member 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955493 8329618 8341009 - 102008546 AGCD01061291;GBCE01000932;XM_005405326 XP_005405383 MODEL 8851640 ncrna LOC102012385 uncharacterized LOC102012385 NW_004955592 538916 543806 - 102012385 AGCD01076317;GBDI01163562;XR_265140 MODEL 9017356 protein-coding Trps1 transcriptional repressor GATA binding 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein domain specific binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); chondrocyte differentiation (ortholog); hair follicle development (ortholog); ASSOCIATED WITH alopecia areata (ortholog); Animal Mammary Neoplasms (ortholog); autistic disorder (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955417 21674545 21913137 - 102028191 AGCD01018402;AGCD01018403;AGCD01018404;AGCD01018405;AGCD01018406;GBCQ01151050;XM_005381890;XM_005381891;XM_005381893;XM_013512789;XM_013512790;XM_013512791;XM_013512792;XM_013512793 XP_005381947;XP_005381948;XP_005381950;XP_013368243;XP_013368244;XP_013368245;XP_013368246;XP_013368247 MODEL 8814674 pseudo LOC102025093 zinc finger protein 23-like NW_004955460 9964512 9970986 - 102025093 AGCD01048565 MODEL 8794623 protein-coding Shisa3 shisa family member 3 INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955443 5367306 5372091 - 102008900 AGCD01038236;GBCQ01012580;XM_005391921;XM_013518028;XM_013518029 XP_005391978;XP_013373482;XP_013373483 MODEL 8928418 protein-coding LOC102003664 apoptosis-associated speck-like protein containing a CARD NW_004955493 8053687 8055442 - 102003664 AGCD01061257;GBDF01238687;XM_005405309 XP_005405366 MODEL 9012162 protein-coding Ttll11 tubulin tyrosine ligase like 11 ENCODES a protein that exhibits protein-glutamic acid ligase activity, elongating (ortholog); protein-glutamic acid ligase activity, initiating (ortholog); tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN microtubule severing (ortholog); ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN ciliary basal body (ortholog) NW_004955419 5968400 6205342 + 102025466 AGCD01019848;AGCD01019849;AGCD01019850;AGCD01019851;AGCD01019852;GBDF01194811;GBDK01203861;XM_013513286 XP_013368740 MODEL 8748194 ncrna LOC102008409 uncharacterized LOC102008409 NW_004955477 11222230 11223234 + 102008409 AGCD01055725;GBBH01224847;XR_263677 MODEL 8960529 protein-coding Tent5c terminal nucleotidyltransferase 5C ENCODES a protein that exhibits poly(A) RNA polymerase activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); mRNA stabilization (ortholog); negative regulation of cell differentiation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955435 20790410 20811730 + 102008884 AGCD01033465;AGCD01033466;GBDF01236475;XM_005389058;XM_005389059 XP_005389115;XP_005389116 MODEL 9020423 protein-coding Rexo5 RNA exonuclease 5 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955493 103588 144412 + 102028764 AGCD01060838;AGCD01060839;GBDK01195535;XM_005405029;XM_005405030;XM_005405032;XM_005405033 XP_005405086;XP_005405087;XP_005405089;XP_005405090 MODEL 9003830 protein-coding LOC102009579 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase NW_004955456 8783121 8961174 + 102009579 AGCD01046502;AGCD01046503;AGCD01046504;GBDF01082105;XM_005396723;XM_013520568;XM_013520569;XM_013520570;XM_013520571 XP_005396780;XP_013376022;XP_013376023;XP_013376024;XP_013376025 MODEL 8979331 protein-coding Prr14l proline rich 14 like ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955455 5802877 5875442 - 102015282 AGCD01045753;AGCD01045754;AGCD01045755;AGCD01045756;AGCD01045757;GBDF01253157;XM_005396334;XM_005396335;XM_013520339;XM_013520340;XM_013520341;XM_013520342;XM_013520343;XM_013520344 XP_005396391;XP_005396392;XP_013375793;XP_013375794;XP_013375795;XP_013375796;XP_013375797;XP_013375798 MODEL 8740844 protein-coding Shbg sex hormone binding globulin INVOLVED IN primary spermatocyte growth (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); diabetes mellitus (ortholog); dilated cardiomyopathy (ortholog) NW_004955467 9301173 9305010 - 102006891 AGCD01051493;AGCD01051494;GBCQ01035544;XM_005399468;XM_005399469;XM_005399470;XM_013522146 XP_005399525;XP_005399526;XP_005399527;XP_013377600 MODEL 8968428 protein-coding St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 ENCODES a protein that exhibits alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity (ortholog); sialyltransferase activity (ortholog); INVOLVED IN cell-cell recognition (ortholog); ganglioside biosynthetic process (ortholog); glycoprotein metabolic process (ortholog); FOUND IN cytoplasm (ortholog) NW_004955419 771721 792756 + 102023473 AGCD01019609;AGCD01019610;AGCD01019611;GBBH01141155;XM_005382400;XM_013513162 XP_005382457;XP_013368616 MODEL 8740447 protein-coding Pigm phosphatidylinositol glycan anchor biosynthesis class M ENCODES a protein that exhibits dol-P-Man:GlcN-acyl-PI alpha-1,4-mannosyltransferase activity (ortholog); mannosyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); Glycosylphosphatidylinositol Biosynthesis Defect 1 (ortholog); Venous Thrombosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-mannosyltransferase I complex (ortholog) NW_004955468 11817647 11820456 - 102012944 AGCD01052139;GBDK01168852;XM_005400190 XP_005400247 MODEL 8970043 ncrna LOC102007631 uncharacterized LOC102007631 NW_004955408 21175728 21206688 - 102007631 AGCD01008553;GBDF01153618;XR_001232359;XR_001232366;XR_259693;XR_259694;XR_259695 MODEL 8937019 pseudo LOC102013939 FGFR1 oncogene partner 2 homolog pseudogene NW_004955486 342946 343511 - 102013939 AGCD01058839 MODEL 8892998 ncrna LOC102009202 uncharacterized LOC102009202 NW_004955508 2070981 2129438 - 102009202 AGCD01065779;AGCD01065780;AGCD01065781;AGCD01065782;GBDF01234233;XR_001231648;XR_001231649;XR_001231650;XR_001231651;XR_001231652;XR_264387 MODEL 8765419 protein-coding Ptar1 protein prenyltransferase alpha subunit repeat containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955434 3309819 3356746 + 102003056 AGCD01032132;GBCQ01141133;XM_005388558 XP_005388615 MODEL 8707836 protein-coding Slc51a solute carrier family 51 member A ENCODES a protein that exhibits bile acid transmembrane transporter activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid secretion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholestasis (ortholog); cognitive disorder (ortholog); FOUND IN basolateral plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955420 12452562 12463369 + 102009507 AGCD01020865;GBDF01222832;XM_005383122;XM_005383123;XM_013513396;XM_013513397 XP_005383179;XP_005383180;XP_013368850;XP_013368851 MODEL 8814603 protein-coding Ripk4 receptor interacting serine/threonine kinase 4 ENCODES a protein that exhibits protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); morphogenesis of an epithelium (ortholog); skin development (ortholog); ASSOCIATED WITH Bartsocas-Papas Syndrome 1 (ortholog); Curly Hair-Ankyloblepharon-Nail Dysplasia Syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog) NW_004955407 39728645 39748752 + 102020205 AGCD01007835;GBBH01093656;XM_005375848;XM_005375849;XM_013505258 XP_005375905;XP_005375906;XP_013360712 MODEL 8857340 protein-coding Igsf1 immunoglobulin superfamily member 1 ENCODES a protein that exhibits activin receptor antagonist activity (ortholog); coreceptor activity (ortholog); inhibin binding (ortholog); INVOLVED IN negative regulation of activin receptor signaling pathway (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); congenital hypothyroidism (ortholog); FOUND IN membrane (ortholog) NW_004955473 3702471 3715506 + 102030300 AGCD01053935;GBDF01237848;XM_005401222;XM_013523048 XP_005401279;XP_013378502 MODEL 8880839 protein-coding Plbd1 phospholipase B domain containing 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); glycerophospholipase activity (ortholog); INVOLVED IN lysosomal protein catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); lung non-small cell carcinoma (ortholog); melanoma (ortholog); FOUND IN extracellular region (ortholog); lysosome (ortholog) NW_004955413 11266589 11326565 - 102026961 AGCD01013956;AGCD01013957;GBCE01152183;XM_013511442 XP_013366896 MODEL 8831526 pseudo LOC102017767 UAP56-interacting factor pseudogene NW_004955472 3663252 3663988 + 102017767 AGCD01053517 MODEL 8704538 protein-coding Pxylp1 2-phosphoxylose phosphatase 1 ENCODES a protein that exhibits phosphatase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); glycosaminoglycan biosynthetic process (ortholog); positive regulation of heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955508 4390647 4449782 - 102020038 AGCD01065866;GBDJ01388065;XM_005407772;XM_005407773;XM_013506265;XM_013506266;XM_013506267;XM_013506268;XM_013506269;XM_013506270;XM_013506271;XM_013506272;XM_013506273;XM_013506274;XM_013506275;XM_013506276;XM_013506277 XP_005407829;XP_005407830;XP_013361719;XP_013361720;XP_013361721;XP_013361722;XP_013361723;XP_013361724;XP_013361725;XP_013361726;XP_013361727;XP_013361728;XP_013361729;XP_013361730;XP_013361731 MODEL 8889983 ncrna LOC102018951 uncharacterized LOC102018951 NW_004955427 1405325 1413360 - 102018951 AGCD01026873;GBDJ01101157;XR_261223 MODEL 39133542 snrna U4 U4 spliceosomal RNA 8987162 ncrna LOC102020075 uncharacterized LOC102020075 NW_004955451 16473682 16475747 + 102020075 AGCD01043679;GBDF01251827;XR_262617 MODEL 8836279 protein-coding Spaca5 sperm acrosome associated 5 NW_004955516 103674 106082 - 102012568 AGCD01067369;GBDF01189240;XM_005408932 XP_005408989 MODEL 8910135 protein-coding Lgals12 galectin 12 ENCODES a protein that exhibits lactose binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) NW_004955599 248058 261697 + 102029251 AGCD01076636;GBDF01085127;XM_005414746;XM_013510064;XM_013510066;XM_013510067;XM_013510068 XP_005414803;XP_013365518;XP_013365520;XP_013365521;XP_013365522 MODEL 39131536 protein-coding DKK1 dickkopf WNT signaling pathway inhibitor 1 10177574 ncrna LOC106147545 uncharacterized LOC106147545 NW_004955579 957048 958346 - 106147545 AGCD01075560;XR_001232470 MODEL 8808218 protein-coding Pnldc1 PARN like ribonuclease domain containing exonuclease 1 ENCODES a protein that exhibits poly(A)-specific ribonuclease activity (ortholog); INVOLVED IN blastocyst formation (ortholog); nuclear-transcribed mRNA poly(A) tail shortening (ortholog); piRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955439 21039638 21058558 - 102014496 AGCD01036135;GBDF01220476;XM_005390708;XM_005390709;XM_013517325;XM_013517326 XP_005390765;XP_005390766;XP_013372779;XP_013372780 MODEL 8975578 protein-coding Trim66 tripartite motif containing 66 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromocenter (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955414 24405986 24459729 - 102019264 AGCD01015545;AGCD01015546;GBDF01083727;XM_005380224;XM_013511881;XM_013511883;XM_013511884;XM_013511885;XM_013511886 XP_005380281;XP_013367335;XP_013367337;XP_013367338;XP_013367339;XP_013367340 MODEL 8787773 ncrna LOC102010339 uncharacterized LOC102010339 NW_004955408 5326384 5328418 + 102010339 AGCD01008132;GBDF01177225;XR_259661 MODEL 8949714 protein-coding Esrp1 epithelial splicing regulatory protein 1 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); branching involved in salivary gland morphogenesis (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 109 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955417 10813831 10881238 + 102027070 AGCD01018096;AGCD01018097;AGCD01018098;AGCD01018099;AGCD01018100;AGCD01018101;AGCD01018102;AGCD01018103;AGCD01018104;AGCD01018105;GBCE01186588;GBDI01133147;XM_005381812;XM_005381813;XM_005381816;XM_005381817 XP_005381869;XP_005381870;XP_005381873;XP_005381874 MODEL 8866370 pseudo LOC102012388 serine/threonine-protein kinase VRK1-like NW_004955402 55411512 55414352 + 102012388 AGCD01001435 MODEL 8976319 ncrna LOC102018579 uncharacterized LOC102018579 NW_004955412 17854861 17864100 - 102018579 AGCD01012919;GBDF01209681;XR_259997 MODEL 9019824 protein-coding Wnt16 Wnt family member 16 INVOLVED IN bone remodeling (ortholog); cardiac epithelial to mesenchymal transition (ortholog); keratinocyte differentiation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955479 3065312 3077260 + 102007764 AGCD01056290;AGCD01056291;GBCE01032577;XM_005402314 XP_005402371 MODEL 8796371 protein-coding Shisa4 shisa family member 4 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog) NW_004955406 37959156 37961972 + 102019664 AGCD01006581;GBCB01005287;GBCE01115144;XM_013522274 XP_013377728 MODEL 8702502 ncrna LOC102015849 uncharacterized LOC102015849 NW_004955419 26437701 26446195 - 102015849 AGCD01020409;GBDF01144301;XR_260658 MODEL 9005211 protein-coding LOC102003313 chromosome unknown open reading frame, human C1orf21 ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955406 23126976 23257616 + 102003313 AGCD01006165;AGCD01006166;AGCD01006167;AGCD01006168;GBCQ01126238;XM_005375052;XM_005375054;XM_013521592 XP_005375109;XP_005375111;XP_013377046 MODEL 8890738 protein-coding Ttll12 tubulin tyrosine ligase like 12 ENCODES a protein that exhibits histone H4K20 trimethyltransferase activity (ortholog); histone H4K20me2 reader activity (ortholog); tubulin-tyrosine ligase activity (ortholog); INVOLVED IN negative regulation of type I interferon-mediated signaling pathway (ortholog); regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955413 28316936 28333423 - 102017001 AGCD01014556;GBDJ01276308;XM_005379439;XM_013511666 XP_005379496;XP_013367120 MODEL 8936827 protein-coding LOC102005069 glycine N-acyltransferase-like protein Keg1 NW_004955511 3599452 3633026 - 102005069 AGCD01066468;AGCD01066469;GBCQ01010946;XM_005408044;XM_005408045;XM_005408046 XP_005408101;XP_005408102;XP_005408103 MODEL 8890431 protein-coding Cacna1f calcium voltage-gated channel subunit alpha1 F ENCODES a protein that exhibits high voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN axonogenesis (ortholog); dendrite morphogenesis (ortholog); detection of light stimulus involved in visual perception (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Aland Island eye disease (ortholog); amblyopia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN membrane (ortholog); neuronal cell body (ortholog); perikaryon (ortholog) NW_004955543 692035 717364 - 102009879 AGCD01071599;GBDK01363496;XM_013508152 XP_013363606 MODEL 9010191 protein-coding Igsf10 immunoglobulin superfamily member 10 INVOLVED IN ossification (ortholog); regulation of neuron migration (ortholog); tissue regeneration (ortholog); ASSOCIATED WITH autoimmune thyroiditis (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955448 2532973 2557650 - 102004340 AGCD01041283;GBDK01308425;XM_005393032;XM_005393033;XM_013518617 XP_005393089;XP_005393090;XP_013374071 MODEL 9065904 protein-coding Fezf1 FEZ family zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); cell dedifferentiation (ortholog); forebrain anterior/posterior pattern specification (ortholog); ASSOCIATED WITH amenorrhea (ortholog); genetic disease (ortholog); hypogonadotropic hypogonadism 22 with or without anosmia (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955479 3945358 3953924 - 102009944 AGCD01056312;GBDF01087471;GBDF01087472;XM_005402319;XM_005402320;XM_013503255 XP_005402376;XP_005402377;XP_013358709 MODEL 8900591 protein-coding Pou6f1 POU class 6 homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH lung adenocarcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog) NW_004955547 1685365 1712028 - 102023958 AGCD01072241;AGCD01072242;GBBH01155724;XM_013508496 XP_013363950 MODEL 8940429 protein-coding LOC102020076 beta-defensin 109-like NW_004955403 53431655 53431963 + 102020076 AGCD01003056;XM_005373910 XP_005373967 MODEL 8929512 protein-coding Shc1 SHC adaptor protein 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); epidermal growth factor binding (ortholog); epidermal growth factor receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); angiogenesis (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog); plasma membrane (ortholog) NW_004955545 1468391 1479209 - 102015985 AGCD01071856;GBDF01158976;XM_005411532;XM_005411534 XP_005411589;XP_005411591 MODEL 8714822 protein-coding Pxmp2 peroxisomal membrane protein 2 ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955482 366613 373339 - 102019391 AGCD01057171;GBCB01058833;XM_005402949 XP_005403006 MODEL 39132363 snrna U6 U6 spliceosomal RNA 9006993 protein-coding Sppl3 signal peptide peptidase like 3 ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); protein homodimerization activity (ortholog); INVOLVED IN membrane protein ectodomain proteolysis (ortholog); membrane protein proteolysis (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) NW_004955455 10849627 10905515 + 102006096 AGCD01045965;GBCE01136763;XM_005396491 XP_005396548 MODEL 8832907 ncrna LOC102009203 uncharacterized LOC102009203 NW_004955429 19713878 19748003 - 102009203 AGCD01028967;AGCD01028968;GBDK01115535;XR_001234525;XR_261366;XR_261367 MODEL 8758132 protein-coding LOC102009169 putative olfactory receptor 56B2 NW_004955414 21743001 21743960 + 102009169 AGCD01015431;XM_005380502 XP_005380559 MODEL 8919989 pseudo LOC102021911 protein kinase C iota type pseudogene NW_004955435 4713737 4714888 - 102021911 AGCD01032843 MODEL 8730608 protein-coding LOC102004360 RB-associated KRAB zinc finger protein NW_004955460 10721784 10738710 - 102004360 AGCD01048602;GBDF01153023;XM_005397845;XM_005397846;XM_013521129;XM_013521131;XM_013521132 XP_005397902;XP_005397903;XP_013376583;XP_013376585;XP_013376586 MODEL 8982585 protein-coding Trpt1 tRNA phosphotransferase 1 ENCODES a protein that exhibits tRNA 2'-phosphotransferase activity (ortholog); INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog) NW_004955422 20851806 20854349 + 102020577 AGCD01023095;GBDF01118758;XM_005384638;XM_005384641;XM_013513959 XP_005384695;XP_005384698;XP_013369413 MODEL 8931635 protein-coding Ptbp1 polypyrimidine tract binding protein 1 ENCODES a protein that exhibits mRNA binding (ortholog); pre-mRNA binding (ortholog); regulatory region RNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cardiac ventricle development (ortholog); IRES-dependent viral translational initiation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); neuron projection terminus (ortholog); nucleolus (ortholog) NW_004955495 6990565 7002492 - 102019185 AGCD01062109;AGCD01062110;GBBH01001751;XM_005406021;XM_005406023;XM_013505338;XM_013505339 XP_005406078;XP_005406080;XP_013360792;XP_013360793 MODEL 8817271 protein-coding Slc51b SLC51 subunit beta ENCODES a protein that exhibits bile acid transmembrane transporter activity (ortholog); protein heterodimerization activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid secretion (ortholog); ASSOCIATED WITH cholestasis (ortholog); cognitive disorder (ortholog); Diabetes Complications (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955450 10365554 10374209 - 102009562 AGCD01042614;AGCD01042615;GBCQ01066742;XM_005393727 XP_005393784 MODEL 8892583 protein-coding LOC102025094 ubiquitin carboxyl-terminal hydrolase 42 NW_004955460 13645785 13690072 - 102025094 AGCD01048713;AGCD01048714;AGCD01048715;AGCD01048716;AGCD01048717;AGCD01048718;GBDI01136910;GBDJ01280509;XM_013521210 XP_013376664 MODEL 8789208 pseudo LOC102009581 rRNA-processing protein UTP23 homolog pseudogene NW_004955458 15500020 15501069 + 102009581 AGCD01047897 MODEL 9031861 ncrna LOC102017768 uncharacterized LOC102017768 NW_004955474 2920107 2934356 - 102017768 AGCD01054312;AGCD01054313;AGCD01054314;GBDF01015351;XR_001230742;XR_263592 MODEL 9060940 protein-coding Plbd2 phospholipase B domain containing 2 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN lysosomal lumen (ortholog); lysosome (ortholog) NW_004955482 9630300 9643212 + 102017339 AGCD01057577;GBBH01031135;GBDK01000319;XM_013503595 XP_013359049 MODEL 8736095 protein-coding Ripor1 RHO family interacting cell polarization regulator 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); INVOLVED IN cellular response to chemokine (ortholog); cellular response to starvation (ortholog); establishment of Golgi localization (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colorectal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955484 9110208 9119678 - 102028755 AGCD01058406;GBDI01045086;XM_005403641 XP_005403698 MODEL 9023324 protein-coding Rps19bp1 ribosomal protein S19 binding protein 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); small-subunit processome (ortholog) NW_004955413 25412621 25415924 - 102004800 AGCD01014405;GBBH01089092;XM_005379300 XP_005379357 MODEL 9014762 protein-coding Prr15 proline rich 15 NW_004955410 31012402 31016035 + 102016140 AGCD01011313;GBCQ01093607;XM_005377484;XR_001232750;XR_001232751 XP_005377541 MODEL 8864745 pseudo LOC102007638 allograft inflammatory factor 1 pseudogene NW_004955464 13479825 13484167 - 102007638 AGCD01050284;AGCD01050285 MODEL 9019592 protein-coding Prame PRAME nuclear receptor transcriptional regulator ENCODES a protein that exhibits nuclear retinoic acid receptor binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); Cul2-RING ubiquitin ligase complex (ortholog) NW_004955455 6921420 6930453 - 102022356 AGCD01045818;GBDF01080426;XM_005396356;XM_013520391 XP_005396413;XP_013375845 MODEL 8837222 protein-coding Lrrc19 leucine rich repeat containing 19 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN host-mediated modulation of intestinal microbiota composition (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); FOUND IN plasma membrane (ortholog) NW_004955472 7841459 7850906 + 102026967 AGCD01053632;GBCQ01066517;XM_005401155 XP_005401212 MODEL 8955098 protein-coding Tmtc4 transmembrane O-mannosyltransferase targeting cadherins 4 ENCODES a protein that exhibits ATPase binding (ortholog); dolichyl-phosphate-mannose-protein mannosyltransferase activity (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); outer hair cell apoptotic process (ortholog); positive regulation of endoplasmic reticulum calcium ion concentration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive nonsyndromic deafness 122 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955404 10213186 10266581 + 102006200 AGCD01003377;GBCE01041273;GBDF01110575;XM_013515999 XP_013371453 MODEL 8767039 protein-coding Spaca7 sperm acrosome associated 7 INVOLVED IN negative regulation of cell adhesion (ortholog); single fertilization (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); extracellular region (ortholog) NW_004955404 1050098 1077184 - 102014315 AGCD01003217;AGCD01003218;GBDF01009174;XM_013515703;XM_013515707 XP_013371157;XP_013371161 MODEL 9014511 protein-coding Ruvbl1 RuvB like AAA ATPase 1 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); gene expression (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955429 15598465 15632290 + 102026554 AGCD01028810;AGCD01028811;GBDF01010843;XM_005387045 XP_005387102 MODEL 8929419 pseudo LOC102013940 28S ribosomal protein S36, mitochondrial pseudogene NW_004955492 8167760 8168071 + 102013940 AGCD01060808;XM_005404994 MODEL 8814186 protein-coding Lgals2 galectin 2 ENCODES a protein that exhibits galactoside binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of inflammatory response (ortholog); PARTICIPATES IN myocardial infarction pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); Coronary Disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN galectin complex (ortholog) NW_004955413 23988193 24001868 - 102005920 AGCD01014344;GBBH01127271;XM_005379208;XM_005379209 XP_005379265;XP_005379266 MODEL 10235058 ncrna LOC106147546 uncharacterized LOC106147546 NW_004955579 12150 27091 - 106147546 AGCD01075531;GBCB01075296;XR_001232471;XR_001232472;XR_001232473;XR_001232474 MODEL 8994964 ncrna LOC102010340 uncharacterized LOC102010340 NW_004955457 12942492 12966671 + 102010340 AGCD01047033;GBBH01124502;XR_262946 MODEL 9002638 protein-coding Pnliprp1 pancreatic lipase related protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); lipase activity (ortholog); INVOLVED IN pancreas development (ortholog); response to glucocorticoid (ortholog); response to peptide hormone (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); prostate cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955431 21391166 21406617 + 102023510 AGCD01030496;XM_005387852 XP_005387909 MODEL 8725467 protein-coding LOC102012389 PRAME family member 6-like NW_004955618 32981 36268 - 102012389 AGCD01077283;AGCD01077284;XM_013510147 XP_013365601 MODEL 8907204 pseudo LOC102018581 14-3-3 protein zeta/delta pseudogene NW_004955466 5972796 5973429 + 102018581 AGCD01050899;XM_005399250 MODEL 8790725 protein-coding Tent5d terminal nucleotidyltransferase 5D ENCODES a protein that exhibits poly(A) RNA polymerase activity (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955529 720659 784609 + 102017157 AGCD01069654;AGCD01069655;AGCD01069656;GBDJ01353542;XM_005410070;XM_013507537;XM_013507538 XP_005410127;XP_013362991;XP_013362992 MODEL 8819659 protein-coding Wnt2 Wnt family member 2 ENCODES a protein that exhibits cytokine activity (ortholog); frizzled binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN atrial cardiac muscle tissue morphogenesis (ortholog); canonical Wnt signaling pathway (ortholog); cardiac epithelial to mesenchymal transition (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH autistic disorder (ortholog); breast cancer (ortholog); breast carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955432 22988208 23024530 - 102015880 AGCD01031272;GBCQ01174742;GBDK01118076;XM_013515906 XP_013371360 MODEL 9054803 protein-coding Rfc1 replication factor C subunit 1 ENCODES a protein that exhibits DNA clamp unloader activity (ortholog); DNA-binding transcription factor binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN FasL mediated signaling pathway; mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Bilateral Vestibulopathy (ortholog); breast cancer (ortholog); FOUND IN DNA replication factor C complex (ortholog); Elg1 RFC-like complex (ortholog); nucleoplasm (ortholog) NW_004955443 7969117 8051734 + 102004016 AGCD01038305;AGCD01038306;AGCD01038307;AGCD01038308;GBBH01228492;GBDF01085359;XM_013518069;XM_013518070 XP_013373523;XP_013373524 MODEL 8716228 protein-coding LOC102012773 fatty acid-binding protein, liver NW_004955424 624397 629958 + 102012773 AGCD01024188;GBCQ01000092;XM_005385381 XP_005385438 MODEL 8914486 protein-coding Serpine1 serpin family E member 1 ENCODES a protein that exhibits endopeptidase inhibitor activity (ortholog); protease binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to aldosterone (ortholog); cellular response to angiotensin (ortholog); PARTICIPATES IN fibrinolysis pathway; hypoxia inducible factor pathway; oxygen homeostasis pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acquired Protein C Deficiency (ortholog); Acute Lung Injury (ortholog); FOUND IN chromaffin granule (ortholog); extracellular exosome (ortholog); extracellular matrix (ortholog) NW_004955456 16147523 16157040 - 102027492 AGCD01046692;GBBH01203227;XM_005396870 XP_005396927 MODEL 9063308 protein-coding Pign phosphatidylinositol glycan anchor biosynthesis class N ENCODES a protein that exhibits mannose-ethanolamine phosphotransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Arachnoid Cysts (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955402 45979577 46114634 - 102019552 AGCD01001145;AGCD01001146;AGCD01001147;AGCD01001148;AGCD01001149;AGCD01001150;AGCD01001151;GBDI01310095;XM_005373015;XM_013511150;XM_013511154;XM_013511163;XM_013511173;XM_013511179;XR_001232906 XP_005373072;XP_013366604;XP_013366608;XP_013366617;XP_013366627;XP_013366633 MODEL 8975972 pseudo LOC102005070 olfactory receptor 5D18-like NW_004955511 636613 637572 + 102005070 AGCD01066336 MODEL 8753085 pseudo LOC102017770 IST1 homolog NW_004955416 24322305 24340636 - 102017770 AGCD01017567 MODEL 9001833 protein-coding Pou6f2 POU class 6 homeobox 2 ASSOCIATED WITH autistic disorder (ortholog); cholangiocarcinoma (ortholog); hypogonadotropic hypogonadism (ortholog) NW_004955460 4021679 4497538 - 102019574 AGCD01048427;AGCD01048428;AGCD01048429;AGCD01048430;AGCD01048431;AGCD01048432;AGCD01048433;AGCD01048434;AGCD01048435;AGCD01048436;GBDK01408737;XM_005397733 XP_005397790 MODEL 8765195 protein-coding Igsf11 immunoglobulin superfamily member 11 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); INVOLVED IN homophilic cell-cell adhesion (ortholog); maintenance of protein location (ortholog); positive regulation of long-term synaptic potentiation (ortholog); ASSOCIATED WITH high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cell-cell junction (ortholog); excitatory synapse (ortholog); glutamatergic synapse (ortholog) NW_004955427 18698774 18716669 - 102021994 AGCD01027348;GBDF01007359;GBDJ01318281;XM_013515231 XP_013370685 MODEL 8988956 ncrna LOC102003665 uncharacterized LOC102003665 NW_004955422 25513884 25522156 + 102003665 AGCD01023251;GBDF01153136;XR_260914 MODEL 8829884 protein-coding Esrp2 epithelial splicing regulatory protein 2 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); branching involved in salivary gland morphogenesis (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); cleft lip (ortholog); COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955484 8426453 8433902 + 102012434 AGCD01058383;GBCQ01177080;XM_005403591 XP_005403648 MODEL 8817598 protein-coding Pxmp4 peroxisomal membrane protein 4 INVOLVED IN ether lipid metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955422 27602348 27617901 + 102026880 AGCD01023328;AGCD01023329;GBDK01282137;XM_005384839 XP_005384896 MODEL 8715958 protein-coding Tmub1 transmembrane and ubiquitin like domain containing 1 INVOLVED IN ERAD pathway (ortholog); postsynaptic neurotransmitter receptor internalization (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); nucleus (ortholog) NW_004955491 5518199 5520743 - 102004076 AGCD01060486;GBDJ01125606;XM_005404815;XM_005404816 XP_005404872;XP_005404873 MODEL 8961638 protein-coding Shisa5 shisa family member 5 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); WW domain binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear envelope (ortholog) NW_004955532 535992 544542 - 102027566 AGCD01070130;GBBH01033742;GBCB01120615;XM_013507610;XM_013507611 XP_013363064;XP_013363065 MODEL 39133543 snrna U4 U4 spliceosomal RNA 8919476 pseudo LOC102003314 40S ribosomal protein S17 pseudogene NW_004955406 36161717 36162486 - 102003314 AGCD01006543 MODEL 8711254 protein-coding St7 suppression of tumorigenicity 7 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); stomach cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955432 22665745 22937163 + 102014077 AGCD01031264;AGCD01031265;AGCD01031266;AGCD01031267;AGCD01031268;AGCD01031269;GBCB01040963;XM_005388126;XM_013515981;XM_013515983;XM_013515984;XM_013515985;XM_013515986;XM_013515987;XM_013515988 XP_005388183;XP_013371435;XP_013371437;XP_013371438;XP_013371439;XP_013371440;XP_013371441;XP_013371442 MODEL 8917734 protein-coding Trpv1 transient receptor potential cation channel subfamily V member 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium channel activity (ortholog); calmodulin binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); calcium ion import across plasma membrane (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH Acute Hepatitis (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); external side of plasma membrane (ortholog) NW_004955467 13221391 13239089 + 102022802 AGCD01051668;AGCD01051669;XM_005399725 XP_005399782 MODEL 8860742 protein-coding LOC102010344 tubulin alpha-3 chain NW_004955461 6060418 6069340 - 102010344 AGCD01048891;GBDK01010972;XM_005398006 XP_005398063 MODEL 9065770 protein-coding Ttll2 tubulin tyrosine ligase like 2 ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); uterine carcinosarcoma (ortholog) NW_004956465 383 1677 + 102021616 AGCD01079643;XM_013510227 XP_013365681 MODEL 39132365 snrna U6 U6 spliceosomal RNA 8901591 protein-coding Fezf2 FEZ family zinc finger 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN axonal fasciculation (ortholog); cell dedifferentiation (ortholog); cerebral cortex GABAergic interneuron migration (ortholog); ASSOCIATED WITH Dwarfism (ortholog); epilepsy (ortholog); hypomyelinating leukodystrophy 5 (ortholog) NW_004955517 3439999 3443477 + 102025387 AGCD01067651;XM_005409044 XP_005409101 MODEL 8984852 protein-coding Dkk1 dickkopf WNT signaling pathway inhibitor 1 ENCODES a protein that exhibits co-receptor binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); receptor antagonist activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); embryonic limb morphogenesis (ortholog); endoderm development (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH anodontia (ortholog); Bone Fractures (ortholog); Breast Neoplasms (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955425 7353964 7357599 + 102017585 AGCD01025383;AGCD01025384;GBDK01196696;XM_013514768 XP_013370222 MODEL 9049584 pseudo LOC102008412 transmembrane protein 208 pseudogene NW_004955417 13153802 13154322 + 102008412 AGCD01018172 MODEL 8732395 protein-coding Plcb1 phospholipase C beta 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN activation of meiosis involved in egg activation (ortholog); cellular response to fluoride (ortholog); cellular response to glyceraldehyde (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); Alzheimer's disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); GABA-ergic synapse (ortholog) NW_004955415 18210608 18915099 + 102020797 AGCD01016445;AGCD01016446;AGCD01016447;AGCD01016448;AGCD01016449;AGCD01016450;AGCD01016451;AGCD01016452;AGCD01016453;AGCD01016454;AGCD01016455;AGCD01016456;AGCD01016457;AGCD01016458;AGCD01016459;AGCD01016460;GBCB01041065;GBDI01190271;XM_005380862 XP_005380919 MODEL 8757300 protein-coding Ripor2 RHO family interacting cell polarization regulator 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); cellular response to chemokine (ortholog); cellular response to mechanical stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant nonsyndromic deafness 21 (ortholog); autosomal recessive nonsyndromic deafness 104 (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) NW_004955483 2048236 2257078 + 102006249 AGCD01057666;AGCD01057667;AGCD01057668;AGCD01057669;AGCD01057670;AGCD01057671;GBCQ01033241;XM_005403354;XM_005403355;XM_005403356;XM_005403357;XM_013503808;XM_013503809 XP_005403411;XP_005403412;XP_005403413;XP_005403414;XP_013359262;XP_013359263 MODEL 8808385 ncrna LOC102020082 uncharacterized LOC102020082 NW_004955406 21559824 21570115 - 102020082 AGCD01006132;AGCD01006133;GBDF01111836;XR_259503 MODEL 8787248 protein-coding Spr sepiapterin reductase ENCODES a protein that exhibits protein homodimerization activity (ortholog); sepiapterin reductase (NADP+) activity (ortholog); INVOLVED IN cell morphogenesis involved in neuron differentiation (ortholog); dopamine metabolic process (ortholog); negative regulation of nitric oxide-cGMP mediated signal transduction (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; Segawa syndrome pathway; ASSOCIATED WITH COVID-19 (ortholog); Developmental Disabilities (ortholog); dystonia (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955424 12711064 12716000 - 102023169 AGCD01024617;GBCQ01002863;GBDJ01180871;XM_005385808 XP_005385865 MODEL 8743223 protein-coding LOC102021913 melanoma-associated antigen B1-like NW_004955531 838720 839739 - 102021913 AGCD01070014;XM_005410143 XP_005410200 MODEL 8879177 protein-coding Spaca9 sperm acrosome associated 9 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN axoneme assembly (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH Ehlers-Danlos syndrome classic type 1 (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog); FOUND IN acrosomal vesicle (ortholog); axonemal microtubule (ortholog); axonemal microtubule doublet inner sheath (ortholog) NW_004955513 2184878 2196367 + 102028322 AGCD01066870;GBDF01222876;XM_005408384;XM_005408385;XM_005408386;XM_005408387;XM_005408388;XM_005408389 XP_005408441;XP_005408442;XP_005408443;XP_005408444;XP_005408445;XP_005408446 MODEL 9027845 protein-coding LOC102018952 developmental pluripotency-associated protein 2 NW_004955427 10138627 10147729 - 102018952 AGCD01027128;GBDF01014812;XM_005386364 XP_005386421 MODEL 8854438 protein-coding Scara3 scavenger receptor class A member 3 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955403 50185857 50223340 + 102007616 AGCD01002960;GBDF01127369;XM_013514256;XM_013514262;XM_013514272;XM_013514277 XP_013369710;XP_013369716;XP_013369726;XP_013369731 MODEL 8706896 protein-coding Pycr1 pyrroline-5-carboxylate reductase 1 ENCODES a protein that exhibits identical protein binding (ortholog); pyrroline-5-carboxylate reductase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); L-glutamate catabolic process (ortholog); L-glutamine catabolic process (ortholog); ASSOCIATED WITH Adducted Thumbs Syndrome (ortholog); Agenesis of Corpus Callosum (ortholog); anxiety disorder (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); pyrroline-5-carboxylate reductase complex (ortholog) NW_004955506 1231874 1236550 + 102023056 AGCD01065251;GBCB01119841;XM_005407242;XM_005407244;XM_013506062;XM_013506063 XP_005407299;XP_005407301;XP_013361516;XP_013361517 MODEL 8714128 pseudo LOC102015852 small ubiquitin-related modifier 1 pseudogene NW_004955486 515925 528616 + 102015852 AGCD01058860;XM_005404296 MODEL 9032099 protein-coding Ptbp2 polypyrimidine tract binding protein 2 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN cerebellum development (ortholog); mRNA splice site recognition (ortholog); negative regulation of RNA splicing (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN growth cone (ortholog); neuronal cell body (ortholog); nucleus (ortholog) NW_004955435 1703588 1773016 + 102027223 AGCD01032752;AGCD01032753;GBCB01041750;GBDF01051639;XM_005388785;XM_013516507;XM_013516508;XM_013516509 XP_005388842;XP_013371961;XP_013371962;XP_013371963 MODEL 8980989 protein-coding Slc13a3 solute carrier family 13 member 3 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); citrate transmembrane transporter activity (ortholog); dicarboxylic acid transmembrane transporter activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); citrate transport (ortholog); dicarboxylic acid transport (ortholog); ASSOCIATED WITH Acute Reversible Leukoencephalopathy with Increased Urinary Alpha-ketoglutarate (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955445 10755336 10829797 + 102017174 AGCD01039679;GBDF01074885;XM_005392372;XM_005392373;XM_013518382;XM_013518383;XM_013518384 XP_005392429;XP_005392430;XP_013373836;XP_013373837;XP_013373838 MODEL 8976933 pseudo LOC102012779 dynactin subunit 6 pseudogene NW_004955425 21033663 21038693 - 102012779 AGCD01025781 MODEL 8910197 protein-coding Cacna1g calcium voltage-gated channel subunit alpha1 G ENCODES a protein that exhibits low voltage-gated calcium channel activity (ortholog); scaffold protein binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN action potential (ortholog); artery smooth muscle contraction (ortholog); calcium ion import (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH absence epilepsy (ortholog); anxiety disorder (ortholog); Ataxia (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955451 11136885 11194321 - 102004345 AGCD01043342;GBDK01097835;XM_005394133;XM_005394135;XM_005394137;XM_005394138;XM_005394139;XM_005394142;XM_005394143;XM_005394144;XM_005394146;XM_005394148;XM_005394149;XM_005394152;XM_005394154;XM_013519070;XM_013519071;XM_013519072;XM_013519073;XM_013519074;XM_013519075;XM_013519076;XM_013519077;XM_013519078;XM_013519079;XM_013519081 XP_005394190;XP_005394192;XP_005394194;XP_005394195;XP_005394196;XP_005394199;XP_005394200;XP_005394201;XP_005394203;XP_005394205;XP_005394206;XP_005394209;XP_005394211;XP_013374524;XP_013374525;XP_013374526;XP_013374527;XP_013374528;XP_013374529;XP_013374530;XP_013374531;XP_013374532;XP_013374533;XP_013374535 MODEL 8927634 protein-coding Shc2 SHC adaptor protein 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955495 7216806 7236056 + 102017680 AGCD01062125;GBCB01098221;GBDF01153002;XM_013505336 XP_013360790 MODEL 9032212 protein-coding LOC102007642 skin secretory protein xP2-like NW_004955467 8730837 8734563 + 102007642 AGCD01051466;AGCD01051467;GBDF01044983;XM_005399752 XP_005399809 MODEL 8984583 protein-coding Trim67 tripartite motif containing 67 INVOLVED IN negative regulation of Ras protein signal transduction (ortholog); positive regulation of neuron projection development (ortholog); positive regulation of ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); high grade glioma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955492 7538492 7578257 - 102009850 AGCD01060800;GBDI01166263;XM_005404980;XM_005404981;XM_013504687;XM_013504688 XP_005405037;XP_005405038;XP_013360141;XP_013360142 MODEL 8924439 pseudo LOC102005074 ferritin heavy chain-like NW_004955515 5069307 5090074 - 102005074 AGCD01067337 MODEL 8746977 protein-coding Rps2 ribosomal protein S2 ENCODES a protein that exhibits enzyme binding (ortholog); fibroblast growth factor binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); formation of translation preinitiation complex (ortholog); response to ethanol (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) NW_004955442 15304306 15306599 + 102012370 AGCD01037864;AGCD01037865;GBBH01002395;GBCQ01005958;XM_005391863;XM_013517681 XP_005391920;XP_013373135 MODEL 8927955 protein-coding LOC102009205 olfactory receptor 5AN1-like NW_004955511 3886762 3887700 - 102009205 AGCD01066481;XM_005408267 XP_005408324 MODEL 8843933 protein-coding Pigo phosphatidylinositol glycan anchor biosynthesis class O ENCODES a protein that exhibits mannose-ethanolamine phosphotransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955472 1084932 1094243 + 102014348 AGCD01053373;GBCE01096334;XM_005401024;XM_005401025;XM_005401026;XM_013523034;XM_013523035 XP_005401081;XP_005401082;XP_005401083;XP_013378488;XP_013378489 MODEL 8789674 protein-coding LOC102003666 dnaJ homolog subfamily B member 6-like NW_004955423 9538198 9539071 - 102003666 AGCD01023662;GBDF01008801;XM_013514572 XP_013370026 MODEL 8952184 ncrna LOC102012393 uncharacterized LOC102012393 NW_004955403 55119286 55129586 - 102012393 AGCD01003110;GBDF01159103;XR_001234447;XR_259276 MODEL 8981727 protein-coding LOC102013941 zinc finger protein 717-like NW_004955422 24138776 24154323 - 102013941 AGCD01023215;GBDF01303385;XM_005384707;XM_005384708 XP_005384764;XP_005384765 MODEL 8961466 protein-coding LOC102018584 C-type lectin domain family 12 member A-like NW_004955413 5408723 5416010 - 102018584 AGCD01013670;GBDK01238521;XM_005378879;XM_005378881;XR_001232931 XP_005378936;XP_005378938 MODEL 8897503 ncrna LOC102021918 uncharacterized LOC102021918 NW_004955438 17912640 17920107 - 102021918 AGCD01035456;XR_261946 MODEL 8731827 protein-coding Tep1 telomerase associated protein 1 ENCODES a protein that exhibits enzyme binding (ortholog); p53 binding (ortholog); RNA binding (ortholog); INVOLVED IN telomere maintenance via recombination (ortholog); telomere maintenance via telomerase (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nuclear matrix (ortholog); ribonucleoprotein complex (ortholog) NW_004955550 1162067 1215746 - 102025294 AGCD01072552;AGCD01072553;AGCD01072554;AGCD01072555;AGCD01072556;GBDI01225734;GBDI01225741;XM_013508569 XP_013364023 MODEL 8728534 protein-coding Rfc2 replication factor C subunit 2 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); enzyme binding (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog); nucleoplasm (ortholog) NW_004955456 13659122 13671405 + 102018895 AGCD01046609;AGCD01046610;GBDK01239240;XM_005396752;XM_013520619 XP_005396809;XP_013376073 MODEL 9041720 protein-coding Esrra estrogen related receptor alpha ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cartilage development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cellular response to insulin stimulus (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Breast Neoplasms (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955422 20768450 20775205 - 102011328 AGCD01023086;GBCB01005642;GBDF01188656;XM_005384600 XP_005384657 MODEL 8705077 protein-coding Scara5 scavenger receptor class A member 5 ENCODES a protein that exhibits ferritin receptor activity (ortholog); INVOLVED IN cellular response to heat (ortholog); endocytosis (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955403 50386212 50486335 - 102009566 AGCD01002966;GBDJ01137248;XM_005373759 XP_005373816 MODEL 8774111 protein-coding Serpine2 serpin family E member 2 ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); heparin binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN blood coagulation (ortholog); cerebellar granular layer morphogenesis (ortholog); dense core granule biogenesis (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); brain edema (ortholog); FOUND IN cytosol (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955453 10049822 10076155 + 102019660 AGCD01044782;GBDF01187903;XM_005395484 XP_005395541 MODEL 8921061 protein-coding Trpv3 transient receptor potential cation channel subfamily V member 3 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN negative regulation of hair cycle (ortholog); positive regulation of calcium ion import (ortholog); response to temperature stimulus (ortholog); ASSOCIATED WITH alopecia (ortholog); atopic dermatitis (ortholog); autosomal dominant mutilating palmoplantar keratoderma with periorificial keratotic plaques (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog); membrane (ortholog) NW_004955467 13246099 13276741 + 102024887 AGCD01051669;AGCD01051670;GBDF01247435;XM_013522250 XP_013377704 MODEL 8755165 protein-coding Lrrc2 leucine rich repeat containing 2 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955420 25492277 25528530 + 102024805 AGCD01021363;AGCD01021364;AGCD01021365;GBDF01266882;GBDJ01107392;XM_013513588 XP_013369042 MODEL 9030206 protein-coding Lgals3 galectin 3 ENCODES a protein that exhibits advanced glycation end-product receptor activity (ortholog); carbohydrate binding (ortholog); chemoattractant activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); eosinophil chemotaxis (ortholog); epithelial cell differentiation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); aortic valve stenosis (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); cornified envelope (ortholog); cytoplasm (ortholog) NW_004955409 8448120 8452437 - 102026836 AGCD01009411;GBBH01000869;GBDF01004149;XM_005376752 XP_005376809 MODEL 39132970 snrna U6 U6 spliceosomal RNA 8784938 protein-coding Pp2d1 protein phosphatase 2C like domain containing 1 ASSOCIATED WITH cervical cancer (ortholog) NW_004955430 12039391 12070440 - 102004505 AGCD01029473;AGCD01029474;AGCD01029475;AGCD01029476;AGCD01029477;AGCD01029478;AGCD01029479;GBDF01084590;XM_005387461 XP_005387518 MODEL 8752892 pseudo LOC102008417 serine/threonine-protein kinase Chk1 pseudogene NW_004955484 9066985 9070701 + 102008417 AGCD01058404 MODEL 8999123 ncrna LOC102025097 uncharacterized LOC102025097 NW_004955411 5016033 5019994 + 102025097 AGCD01011593;GBDJ01318909;XR_259918 MODEL 8802364 protein-coding Pnliprp2 pancreatic lipase related protein 2 ENCODES a protein that exhibits calcium ion binding (ortholog); galactolipase activity (ortholog); glycerophospholipase activity (ortholog); INVOLVED IN cellular defense response (ortholog); galactolipid catabolic process (ortholog); intestinal lipid catabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; ASSOCIATED WITH cervical cancer (ortholog); Familial Prostate Cancer (ortholog); melanoma (ortholog); FOUND IN extracellular region (ortholog); neuron projection (ortholog); zymogen granule membrane (ortholog) NW_004955431 21425345 21442979 + 102023834 AGCD01030496;GBDJ01313541;XM_005387853 XP_005387910 MODEL 8905759 protein-coding Tmub2 transmembrane and ubiquitin like domain containing 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955451 17277530 17280585 + 102009906 AGCD01043735;GBCB01042231;GBDF01084095;XM_005394521 XP_005394578 MODEL 8832082 protein-coding Wnt2b Wnt family member 2B INVOLVED IN canonical Wnt signaling pathway (ortholog); cellular response to starvation (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Diarrhea 9 (ortholog); endodermal sinus tumor (ortholog); esophageal cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955435 15948262 15962958 + 102003274 AGCD01033291;GBDF01056432;XM_005388958;XM_013516420 XP_005389015;XP_013371874 MODEL 8752424 protein-coding Pxn paxillin ENCODES a protein that exhibits beta-catenin binding (ortholog); BH4 domain binding (ortholog); integrin binding (ortholog); INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); cell migration (ortholog); cellular response to reactive oxygen species (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; insulin-like growth factor signaling pathway; integrin mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Experimental Melanoma (ortholog); FOUND IN cell leading edge (ortholog); cell-cell junction (ortholog); cytosol (ortholog) NW_004955455 11387140 11401178 + 102013905 AGCD01046003;GBDK01059902;XM_005396515;XM_013520331;XM_013520332 XP_005396572;XP_013375785;XP_013375786 MODEL 8799737 protein-coding Shisa6 shisa family member 6 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN excitatory chemical synaptic transmission (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); postsynaptic neurotransmitter receptor diffusion trapping (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric, glutamatergic, excitatory synapse (ortholog); glutamatergic synapse (ortholog) NW_004955467 5701521 5998910 - 102004368 AGCD01051397;AGCD01051398;AGCD01051399;AGCD01051400;AGCD01051401;GBDF01307813;XM_005399742 XP_005399799 MODEL 8842242 protein-coding Spred1 sprouty related EVH1 domain containing 1 ENCODES a protein that exhibits phosphatase binding (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of angiogenesis (ortholog); negative regulation of cell migration involved in sprouting angiogenesis (ortholog); negative regulation of epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955416 5288779 5376861 + 102007890 AGCD01016907;AGCD01016908;GBDI01256639;XM_005381197 XP_005381254 MODEL 8963115 protein-coding LOC102003315 keratin-associated protein 13-1-like NW_004955407 29787812 29788369 + 102003315 AGCD01007615;XM_005375630 XP_005375687 MODEL 730468930 misc_rna ST7-OT3_1 ST7 overlapping transcript 3 conserved region 1 9051895 protein-coding Pycr2 pyrroline-5-carboxylate reductase 2 ENCODES a protein that exhibits pyrroline-5-carboxylate reductase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); L-glutamate catabolic process (ortholog); L-glutamine catabolic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955489 138600 143112 - 102008736 AGCD01059778;GBBH01031760;GBDJ01018987;XM_005404488 XP_005404545 MODEL 8945020 protein-coding Prap1 proline rich acidic protein 1 ENCODES a protein that exhibits triglyceride binding (ortholog); INVOLVED IN cellular response to X-ray (ortholog); deactivation of mitotic spindle assembly checkpoint (ortholog); DNA damage response (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955477 10982530 11002747 + 102003965 AGCD01055712;AGCD01055713;GBDF01083668;XM_005402061;XM_005402062;XM_013503054;XR_001230825;XR_001230826 XP_005402118;XP_005402119;XP_013358508 MODEL 8923839 pseudo LOC102004361 rRNA-processing protein FCF1 homolog NW_004955409 37449725 37450930 + 102004361 AGCD01010519 MODEL 9054207 protein-coding Slc13a4 solute carrier family 13 member 4 ENCODES a protein that exhibits sodium:sulfate symporter activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955494 7013577 7057767 + 102009072 AGCD01061545;GBDJ01270862;XM_005405472;XM_013505027 XP_005405529;XP_013360481 MODEL 8699819 protein-coding Smarce1 SWI/SNF related BAF chromatin remodeling complex subunit E1 ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); N-acetyltransferase activity (ortholog); nuclear receptor binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); negative regulation of DNA-templated transcription (ortholog); neurogenesis (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); autistic disorder (ortholog); FOUND IN nBAF complex (ortholog); npBAF complex (ortholog); nucleoplasm (ortholog) NW_004955451 15129619 15147487 - 102016124 AGCD01043596;AGCD01043597;GBDF01044017;GBDK01004228;XM_005394363 XP_005394420 MODEL 39132366 snrna U6 U6 spliceosomal RNA 8980221 protein-coding Igsf21 immunoglobin superfamily member 21 INVOLVED IN synapse maturation (ortholog); trans-synaptic signaling, modulating synaptic transmission (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog); inhibitory synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955527 773340 994679 - 102020371 AGCD01069387;GBCQ01162091;GBDF01111574;XM_005409806 XP_005409863 MODEL 8956205 protein-coding Ruvbl2 RuvB like AAA ATPase 2 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to UV (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) NW_004955559 1657241 1674272 - 102026269 AGCD01073658;AGCD01073659;GBDF01009024;XM_005412916 XP_005412973 MODEL 8965931 pseudo LOC102009587 39S ribosomal protein L30, mitochondrial pseudogene NW_004955464 11215198 11215862 + 102009587 AGCD01050139 MODEL 9053077 ncrna LOC102020083 uncharacterized LOC102020083 NW_004955406 42073422 42086024 - 102020083 AGCD01006696;GBDK01053873;XR_001230726;XR_001230731;XR_259535 MODEL 8984561 protein-coding Grm6 glutamate metabotropic receptor 6 ENCODES a protein that exhibits adenylate cyclase inhibiting G protein-coupled glutamate receptor activity (ortholog); glutamate receptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); chemical synaptic transmission (ortholog); detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1B (ortholog); congenital stationary night blindness 1C (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955408 1421132 1432010 + 102009468 AGCD01007959;GBCB01048356;XM_013507979 XP_013363433 MODEL 8845315 protein-coding Ripor3 RIPOR family member 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955445 7685898 7753370 + 102025299 AGCD01039550;AGCD01039551;GBCQ01098176;XM_005392313;XM_013518352;XM_013518353;XM_013518354;XM_013518355;XM_013518356 XP_005392370;XP_013373806;XP_013373807;XP_013373808;XP_013373809;XP_013373810 MODEL 8808283 protein-coding Plcb2 phospholipase C beta 2 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); phosphatidylinositol phospholipase C activity (ortholog); INVOLVED IN cell chemotaxis (ortholog); detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); phosphatidylinositol metabolic process (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); G-protein beta/gamma-subunit complex (ortholog); neuronal dense core vesicle (ortholog) NW_004955416 7221326 7240743 - 102017866 AGCD01016970;GBDJ01275265;XM_005381228;XM_005381229;XM_005381230;XM_013512599;XM_013512600 XP_005381285;XP_005381286;XP_005381287;XP_013368053;XP_013368054 MODEL 39133544 snrna U4 U4 spliceosomal RNA 8859532 ncrna LOC102015853 uncharacterized LOC102015853 NW_004955421 20885464 20907069 - 102015853 AGCD01022098;GBCE01066577;XR_001233827;XR_260798 MODEL 8715509 protein-coding CUNH22orf23 chromosome unknown C22orf23 homolog ASSOCIATED WITH esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955413 24291712 24300294 - 102012847 AGCD01014360;GBDF01011259;XM_005379234;XM_013511473 XP_005379291;XP_013366927 MODEL 8763673 pseudo LOC102013943 ubiquitin-protein ligase E3A-like NW_004955422 14030769 14050042 - 102013943 AGCD01022846;AGCD01022847;XR_260935 MODEL 8728966 pseudo LOC102010348 zinc finger CCHC domain-containing protein 8-like NW_004955411 3492784 3499691 - 102010348 AGCD01011553 MODEL 9064735 protein-coding LOC102017774 haptoglobin NW_004955484 4738412 4742596 + 102017774 AGCD01058231;GBDJ01008430;XM_005403528 XP_005403585 MODEL 8920557 protein-coding Ffar1 free fatty acid receptor 1 ENCODES a protein that exhibits bioactive lipid receptor activity (ortholog); fatty acid binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); glucose homeostasis (ortholog); insulin secretion (ortholog); ASSOCIATED WITH familial hypercholesterolemia (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955468 4626567 4627683 + 102018075 AGCD01051918;XM_005400050 XP_005400107 MODEL 8866145 protein-coding Esrrb estrogen related receptor beta ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell dedifferentiation (ortholog); cell population proliferation (ortholog); embryonic placenta development (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 35 (ortholog); cholangiocarcinoma (ortholog); dilated cardiomyopathy (ortholog); FOUND IN chromosome (ortholog); condensed chromosome (ortholog); cytoplasm (ortholog) NW_004955438 365375 534086 + 102029663 AGCD01034946;AGCD01034947;AGCD01034948;AGCD01034949;AGCD01034950;AGCD01034951;GBCQ01188054;XM_005390154;XM_013517291;XM_013517292 XP_005390211;XP_013372745;XP_013372746 MODEL 8947428 protein-coding LOC102007648 olfactory receptor 52B6 NW_004955414 21480839 21485708 + 102007648 AGCD01015421;XM_005380092 XP_005380149 MODEL 8728506 protein-coding Bicra BRD4 interacting chromatin remodeling complex associated protein ENCODES a protein that exhibits transcription regulator activator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleus (ortholog); SWI/SNF complex (ortholog) NW_004955574 1463656 1484709 + 102018239 AGCD01075180;AGCD01075181;GBCB01112015;GBCE01142278;XM_013509545 XP_013364999 MODEL 8725972 ncrna LOC102005075 uncharacterized LOC102005075 NW_004955433 12925114 12937990 - 102005075 AGCD01031673;XR_261590 MODEL 8973886 protein-coding Dkk2 dickkopf WNT signaling pathway inhibitor 2 ENCODES a protein that exhibits co-receptor binding (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of Wnt signaling pathway (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955496 2489373 2578310 + 102006790 AGCD01062269;AGCD01062270;GBBH01218890;XM_005406215 XP_005406272 MODEL 8776985 pseudo LOC102009207 THO complex subunit 4-like NW_004955512 905817 925046 + 102009207 AGCD01066626 MODEL 9030327 protein-coding Serpine3 serpin family E member 3 NW_004955431 4694654 4727080 + 102003993 AGCD01030006;AGCD01030007;XM_005387608 XP_005387665 MODEL 8794086 protein-coding Rwdd2a RWD domain containing 2A ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955411 10925958 10929340 + 102013151 AGCD01011798;GBDK01364773;XM_005377687;XM_005377688;XM_013510759 XP_005377744;XP_005377745;XP_013366213 MODEL 8926920 ncrna LOC102018953 uncharacterized LOC102018953 NW_004955506 2648403 2663497 - 102018953 AGCD01065298;AGCD01065299;GBDF01001236;XR_001231580;XR_001231581;XR_264336 MODEL 8766947 protein-coding LOC102012401 myotubularin-related protein 3-like NW_004955455 4250135 4256614 - 102012401 AGCD01045673;GBDK01132871;XM_005396226;XM_005396227 XP_005396283;XP_005396284 MODEL 8923815 protein-coding LOC102003667 phylloquinone omega-hydroxylase CYP4F2-like NW_004955495 7690774 7703651 - 102003667 AGCD01062160;GBDI01129621;XM_013505322;XM_013505323 XP_013360776;XP_013360777 MODEL 8935477 protein-coding Ppa1 inorganic pyrophosphatase 1 ENCODES a protein that exhibits inorganic diphosphate phosphatase activity (ortholog); MAP kinase serine/threonine phosphatase activity (ortholog); pyrophosphatase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955437 21027516 21057712 + 102025173 AGCD01034895;AGCD01034896;GBCC01028794;GBDI01004311;XM_013517122 XP_013372576 MODEL 8864170 ncrna LOC102018592 uncharacterized LOC102018592 NW_004955414 33004937 33019763 + 102018592 AGCD01015794;AGCD01015795;GBCQ01142945;XR_001233135;XR_001233136 MODEL 8899060 protein-coding Ttll3 tubulin tyrosine ligase like 3 ENCODES a protein that exhibits protein-glycine ligase activity (ortholog); protein-glycine ligase activity, initiating (ortholog); INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); microtubule cytoskeleton (ortholog) NW_004955561 1330378 1353217 + 102009329 AGCD01073848;AGCD01073849;AGCD01073850;AGCD01073851;GBBH01025151;GBDK01233715;XM_013509082;XM_013509083 XP_013364536;XP_013364537 MODEL 9029942 ncrna LOC102012781 uncharacterized LOC102012781 NW_004955506 899099 904521 - 102012781 AGCD01065240;GBCE01032246;XR_264316 MODEL 39133546 snrna U4 U4 spliceosomal RNA 9068001 protein-coding Tepsin TEPSIN adaptor related protein complex 4 accessory protein ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN AP-4 adaptor complex (ortholog); coated vesicle membrane (ortholog); cytoplasm (ortholog) NW_004955506 1773560 1781467 + 102008335 AGCD01065273;GBDF01127350;XM_005407286;XM_005407287;XM_005407288;XM_005407290;XM_005407293;XM_005407294;XM_005407295;XM_013506031;XM_013506032;XM_013506033;XM_013506034;XM_013506035 XP_005407343;XP_005407344;XP_005407345;XP_005407347;XP_005407350;XP_005407351;XP_005407352;XP_013361485;XP_013361486;XP_013361487;XP_013361488;XP_013361489 MODEL 8699945 protein-coding LOC102021923 malonyl-CoA decarboxylase, mitochondrial NW_004955564 281274 328682 - 102021923 AGCD01074195;AGCD01074196;AGCD01074197;AGCD01074198;GBDI01256173;XM_005413231;XM_005413232;XM_005413233;XM_005413234;XM_005413235;XM_005413236;XM_013509208 XP_005413288;XP_005413289;XP_005413290;XP_005413291;XP_005413292;XP_005413293;XP_013364662 MODEL 9061538 protein-coding Pigp phosphatidylinositol glycan anchor biosynthesis class P ENCODES a protein that exhibits phosphatidylinositol N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); developmental and epileptic encephalopathy 55 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (ortholog) NW_004955407 36178323 36185317 - 102013906 AGCD01007761;XM_013504675 XP_013360129 MODEL 8908683 protein-coding Sytl5 synaptotagmin like 5 INVOLVED IN exocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955601 76647 210198 + 102026928 AGCD01076746;AGCD01076747;GBDI01057595;XM_005414815 XP_005414872 MODEL 10072507 ncrna LOC106147547 uncharacterized LOC106147547 NW_004955579 4359 6785 - 106147547 AGCD01075530;GBDF01040492;XR_001232475;XR_001232476 MODEL 8738857 protein-coding LOC102004372 intelectin-1a NW_004955468 12649293 12708557 - 102004372 AGCD01052172;AGCD01052173;AGCD01052174;AGCD01052175;AGCD01052176;AGCD01052177;AGCD01052178;AGCD01052179;AGCD01052180;AGCD01052181;GBBH01135202;GBDF01177021;XM_013522493 XP_013377947 MODEL 8871182 protein-coding Scarb1 scavenger receptor class B member 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); apolipoprotein A-I binding (ortholog); apolipoprotein binding (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); blood vessel endothelial cell migration (ortholog); cholesterol catabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; reverse cholesterol transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); cannabis abuse (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) NW_004955482 4813502 4836479 + 102009609 AGCD01057311;GBBH01183747;XM_005403004;XM_005403005;XM_005403006;XM_005403007;XM_013503708 XP_005403061;XP_005403062;XP_005403063;XP_005403064;XP_013359162 MODEL 8877249 protein-coding Lrrc20 leucine rich repeat containing 20 ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955437 20900740 20968294 + 102014287 AGCD01034893;GBDF01118637;XM_005390060;XM_005390062;XM_013517010;XM_013517011;XM_013517012 XP_005390117;XP_005390119;XP_013372464;XP_013372465;XP_013372466 MODEL 8959460 protein-coding Trpv4 transient receptor potential cation channel subfamily V member 4 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); alpha-tubulin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); ATP export (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); anxiety disorder (ortholog); Arachnodactyly (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); cell surface (ortholog) NW_004955455 8744865 8781644 + 102018566 AGCD01045908;AGCD01045909;GBCQ01123903;XM_005396446;XM_005396447;XM_013520488 XP_005396503;XP_005396504;XP_013375942 MODEL 8925934 protein-coding Lgals3bp galectin 3 binding protein ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955506 3731810 3741314 + 102028775 AGCD01065319;GBBH01003797;XM_005407353 XP_005407410 MODEL 8767221 ncrna LOC102020085 uncharacterized LOC102020085 NW_004955407 37623542 37626349 + 102020085 AGCD01007785;GBDF01278071;XR_259618 MODEL 9032743 protein-coding Rwdd1 RWD domain containing 1 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955526 94518 120421 - 102027449 AGCD01069210;AGCD01069211;AGCD01069212;GBDJ01131321;XM_005409748 XP_005409805 MODEL 8742575 protein-coding Pnma2 PNMA family member 2 ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955403 49183280 49184855 - 102027806 AGCD01002935;XM_005415298 XP_005415355 MODEL 9023152 ncrna LOC102025099 uncharacterized LOC102025099 NW_004955411 35546106 35572131 - 102025099 AGCD01012440;XR_259954 MODEL 8749819 protein-coding Grm7 glutamate metabotropic receptor 7 ENCODES a protein that exhibits adenylate cyclase inhibiting G protein-coupled glutamate receptor activity (ortholog); adenylate cyclase inhibitor activity (ortholog); calcium channel regulator activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult behavior (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN asymmetric synapse (ortholog); axon (ortholog); axon terminus (ortholog) NW_004955421 5723662 6542557 - 102016388 AGCD01021724;AGCD01021725;AGCD01021726;AGCD01021727;AGCD01021728;AGCD01021729;AGCD01021730;AGCD01021731;AGCD01021732;AGCD01021733;AGCD01021734;AGCD01021735;AGCD01021736;AGCD01021737;GBDJ01375281;XM_005383736;XM_005383738;XR_001233876 XP_005383793;XP_005383795 MODEL 39131450 protein-coding WNT3 Wnt family member 3 8883353 protein-coding Slc52a2 solute carrier family 52 member 2 ENCODES a protein that exhibits 4-hydroxybutyrate receptor activity (ortholog); riboflavin transmembrane transporter activity (ortholog); INVOLVED IN riboflavin transport (ortholog); ASSOCIATED WITH Ataxia (ortholog); autosomal recessive nonsyndromic deafness 9 (ortholog); Brown-Vialetto-Van Laere syndrome (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955454 2944169 2982203 + 102027266 AGCD01045040;AGCD01045041;AGCD01045042;AGCD01045043;AGCD01045044;GBDF01080372;XM_005395861;XM_005395862;XM_005395863 XP_005395918;XP_005395919;XP_005395920 MODEL 8728685 protein-coding Spred2 sprouty related EVH1 domain containing 2 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); stem cell factor receptor binding (ortholog); INVOLVED IN negative regulation of epithelial to mesenchymal transition (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of intracellular signal transduction (ortholog); ASSOCIATED WITH achondroplasia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955424 19133568 19250118 + 102030213 AGCD01024808;AGCD01024809;AGCD01024810;GBDF01306128;XM_005385687;XM_013514715;XM_013514716 XP_005385744;XP_013370169;XP_013370170 MODEL 730469496 misc_rna ST7-OT3_2 ST7 overlapping transcript 3 conserved region 2 8895235 pseudo LOC102003316 plasma membrane calcium-transporting ATPase 4 pseudogene NW_004955455 2108161 2110677 + 102003316 AGCD01045588 MODEL 8796262 pseudo LOC102013947 protein-lysine N-methyltransferase Mettl10 pseudogene NW_004955424 28152797 28154395 + 102013947 AGCD01025147 MODEL 39133547 snrna U4 U4 spliceosomal RNA 9035198 protein-coding Pycr3 pyrroline-5-carboxylate reductase 3 ENCODES a protein that exhibits identical protein binding (ortholog); pyrroline-5-carboxylate reductase activity (ortholog); INVOLVED IN L-glutamine catabolic process (ortholog); L-proline biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955454 2305485 2311280 - 102007405 AGCD01045015;GBCB01101013;XM_005395787 XP_005395844 MODEL 8776633 protein-coding Prc1 protein regulator of cytokinesis 1 ENCODES a protein that exhibits identical protein binding (ortholog); kinesin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); regulation of cytokinesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); Breast Neoplasms (ortholog); FOUND IN chromosome (ortholog); contractile ring (ortholog); microtubule cytoskeleton (ortholog) NW_004955416 15023620 15045958 - 102018828 AGCD01017296;AGCD01017297;GBDJ01422852;XM_005381518;XM_005381519;XM_005381521;XM_013512475 XP_005381575;XP_005381576;XP_005381578;XP_013367929 MODEL 9010871 pseudo LOC102007650 zinc finger and BTB domain-containing protein 14-like NW_004955470 12771610 12776657 - 102007650 AGCD01052939;AGCD01052940 MODEL 39132972 snrna U6 U6 spliceosomal RNA 8938138 protein-coding LOC102009589 olfactory receptor 8B12-like NW_004955412 25555457 25557190 - 102009589 AGCD01013160;XM_005378425 XP_005378482 MODEL 8735834 protein-coding Spacdr sperm acrosome developmental regulator INVOLVED IN spermatid development (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955410 31509985 31513231 - 102019038 AGCD01011327;GBDF01001669;XM_005377495;XM_005377496 XP_005377552;XP_005377553 MODEL 8830705 protein-coding Tmx1 thioredoxin related transmembrane protein 1 ENCODES a protein that exhibits disulfide oxidoreductase activity (ortholog); enzyme inhibitor activity (ortholog); protein disulfide isomerase activity (ortholog); INVOLVED IN negative regulation of platelet aggregation (ortholog); negative regulation of triglyceride biosynthetic process (ortholog); positive regulation of ERAD pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog) NW_004955409 11708867 11722205 - 102014218 AGCD01009520;AGCD01009521;GBDI01168278;XM_005376792 XP_005376849 MODEL 8838993 protein-coding Scarb2 scavenger receptor class B member 2 ENCODES a protein that exhibits cargo receptor activity (ortholog); cholesterol binding (ortholog); enzyme binding (ortholog); INVOLVED IN aminophospholipid transport (ortholog); autophagy (ortholog); endosome to plasma membrane protein transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN endocytic vesicle membrane (ortholog); lysosomal lumen (ortholog); lysosomal membrane (ortholog) NW_004955433 884740 962932 - 102013442 AGCD01031339;AGCD01031340;GBCB01002351;GBCE01029601;XM_005388182 XP_005388239 MODEL 10254376 protein-coding Shisa7 shisa family member 7 ENCODES a protein that exhibits GABA receptor binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN gamma-aminobutyric acid receptor clustering (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); memory (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric, glutamatergic, excitatory synapse (ortholog); glutamatergic synapse (ortholog) NW_004955567 840193 845093 + 106147486 AGCD01074438;AGCD01074439;GBDJ01371014;GBDJ01371016;XM_013509311 XP_013364765 MODEL 8780262 protein-coding Ripply1 ripply transcriptional repressor 1 INVOLVED IN bone morphogenesis (ortholog); Notch signaling pathway (ortholog); regulation of gene expression (ortholog) NW_004955490 9167071 9172101 + 102021676 AGCD01060306;XM_005404707 XP_005404764 MODEL 8699813 ncrna LOC102015854 uncharacterized LOC102015854 NW_004955489 8966832 8998732 + 102015854 AGCD01060025;GBDK01379970;XR_264026 MODEL 9029802 protein-coding Slc13a5 solute carrier family 13 member 5 ENCODES a protein that exhibits citrate transmembrane transporter activity (ortholog); identical protein binding (ortholog); organic acid:sodium symporter activity (ortholog); INVOLVED IN alpha-ketoglutarate transport (ortholog); cellular response to lithium ion (ortholog); citrate transport (ortholog); ASSOCIATED WITH chronic kidney disease (ortholog); colon adenocarcinoma (ortholog); developmental and epileptic encephalopathy 25 (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955467 12181555 12217280 - 102007978 AGCD01051625;GBDF01196108;XM_005399670;XM_013522142;XM_013522144 XP_005399727;XP_013377596;XP_013377598 MODEL 39132367 snrna U6 U6 spliceosomal RNA 8932382 ncrna LOC102012784 uncharacterized LOC102012784 NW_004955428 17863566 17878885 + 102012784 AGCD01028052;GBCQ01167239;XR_261304 MODEL 8756917 protein-coding LOC102017776 uncharacterized LOC102017776 NW_004955420 25040524 25045906 + 102017776 AGCD01021341;GBCQ01153372;XM_005383415 XP_005383472 MODEL 8850923 protein-coding Ffar3 free fatty acid receptor 3 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to fatty acid (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH essential hypertension (ortholog); urinary bladder cancer (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955468 4627686 4634499 + 102018377 AGCD01051918;AGCD01051919;XM_005400051 XP_005400108 MODEL 8871171 pseudo LOC102008418 40S ribosomal protein S13 pseudogene NW_004955485 7336794 7337638 - 102008418 AGCD01058654;XM_005403816 MODEL 8965390 protein-coding Smc1a structural maintenance of chromosomes 1A ENCODES a protein that exhibits chromatin binding (ortholog); mediator complex binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); mitotic spindle assembly (ortholog); response to DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Ataxia (ortholog); FOUND IN cohesin complex (ortholog); cytosol (ortholog); kinetochore (ortholog) NW_004955475 421472 468286 - 102014447 AGCD01054690;AGCD01054691;AGCD01054692;GBDF01222516;XM_005401492;XM_005401493;XM_013502820 XP_005401549;XP_005401550;XP_013358274 MODEL 8997349 protein-coding Syvn1 synoviolin 1 ENCODES a protein that exhibits ATPase binding (ortholog); DNA-binding transcription factor binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN ERAD pathway (ortholog); immature B cell differentiation (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); encephalomalacia (ortholog); FOUND IN Derlin-1 retrotranslocation complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955422 20067933 20074947 + 102014912 AGCD01023064;GBDF01047250;XM_005384510;XM_005384511;XM_005384512;XM_013514056 XP_005384567;XP_005384568;XP_005384569;XP_013369510 MODEL 8955093 ncrna LOC102005078 uncharacterized LOC102005078 NW_004955526 2723249 2727334 - 102005078 AGCD01069312;GBCQ01078069;XR_264658 MODEL 8740345 protein-coding Esrrg estrogen related receptor gamma ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); estrogen response element binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of cold-induced thermogenesis (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Fetal Growth Retardation (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog) NW_004955406 1260240 1784652 + 102009797 AGCD01005630;AGCD01005631;AGCD01005632;AGCD01005633;AGCD01005634;AGCD01005635;AGCD01005636;GBCB01100801;XM_005374714;XM_013519877;XM_013519883;XM_013519891;XM_013519896;XM_013519901;XM_013519909;XM_013519919;XM_013519926 XP_005374771;XP_013375331;XP_013375337;XP_013375345;XP_013375350;XP_013375355;XP_013375363;XP_013375373;XP_013375380 MODEL 10118785 ncrna LOC106147549 uncharacterized LOC106147549 NW_004955408 29110210 29113731 - 106147549 AGCD01008738;XR_001232480 MODEL 8781246 ncrna LOC102009208 uncharacterized LOC102009208 NW_004955514 376958 384322 + 102009208 AGCD01067008;AGCD01067009;GBDF01062503;XR_264490 MODEL 8729020 protein-coding Serpinf1 serpin family F member 1 INVOLVED IN cellular response to cobalt ion (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to glucose stimulus (ortholog); ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); adenoid cystic carcinoma (ortholog); Albuminuria (ortholog); FOUND IN axon (ortholog); axon hillock (ortholog); basement membrane (ortholog) NW_004955481 1414930 1426436 - 102015719 AGCD01056832;GBDK01110727;XM_005402604;XM_005402605 XP_005402661;XP_005402662 MODEL 8958546 protein-coding LOC102012404 olfactory receptor 6C74-like NW_004955458 2414762 2415699 - 102012404 AGCD01047233;XM_013520846 XP_013376300 MODEL 39132974 snrna U6 U6 spliceosomal RNA 8969024 protein-coding Rwdd2b RWD domain containing 2B ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955407 28363476 28371491 - 102024762 AGCD01007581;GBCB01076811;XM_005375609;XM_005375610;XM_005375611 XP_005375666;XP_005375667;XP_005375668 MODEL 8886798 protein-coding CUNH22orf31 chromosome unknown C22orf31 homolog ASSOCIATED WITH cervical cancer (ortholog) NW_004955455 3290397 3302619 - 102024977 AGCD01045620;AGCD01045621;GBCE01031667;XM_013520305 XP_013375759 MODEL 8768814 protein-coding Ppa2 inorganic pyrophosphatase 2 ENCODES a protein that exhibits inorganic diphosphate phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN diphosphate metabolic process (ortholog); regulation of mitochondrial membrane potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); Alcohol-Induced Sudden Cardiac Failure (ortholog); FOUND IN mitochondrion (ortholog); synapse (ortholog) NW_004955496 3765038 3831312 + 102029529 AGCD01062299;AGCD01062300;AGCD01062301;GBBH01119516;XM_005406284 XP_005406341 MODEL 8835147 protein-coding Trpv6 transient receptor potential cation channel subfamily V member 6 ENCODES a protein that exhibits calcium channel activity (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); calcium ion import (ortholog); calcium ion import across plasma membrane (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); craniosynostosis (ortholog); genetic disease (ortholog); FOUND IN calcium channel complex (ortholog); plasma membrane (ortholog) NW_004955494 820801 835931 - 102004942 AGCD01061385;AGCD01061386;GBCE01039170;XM_005405387 XP_005405444 MODEL 9038745 protein-coding Pnmt phenylethanolamine N-methyltransferase ENCODES a protein that exhibits phenylethanolamine N-methyltransferase activity (ortholog); INVOLVED IN adrenal gland development (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN alkaptonuria pathway; aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Contusions (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); neuronal cell body (ortholog) NW_004955451 14414836 14417972 + 102028817 AGCD01043552;GBCB01077385;XM_005394315;XM_005394316 XP_005394372;XP_005394373 MODEL 8709888 ncrna LOC102010349 uncharacterized LOC102010349 NW_004955465 9065822 9075222 + 102010349 AGCD01050484;GBDK01032471;XR_001236720;XR_263253 MODEL 8806175 protein-coding LOC102025102 uncharacterized LOC102025102 NW_004955466 10805473 10806476 + 102025102 AGCD01051077;GBDF01213392;XM_005399201 XP_005399258 MODEL 8815130 protein-coding Terb1 telomere repeat binding bouquet formation protein 1 INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); homologous chromosome pairing at meiosis (ortholog); meiotic attachment of telomere to nuclear envelope (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); azoospermia (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) NW_004955433 23290030 23332886 - 102016510 AGCD01031957;GBDF01160139;XM_013516114;XM_013516115;XM_013516116;XM_013516117 XP_013371568;XP_013371569;XP_013371570;XP_013371571 MODEL 8974237 protein-coding Grm8 glutamate metabotropic receptor 8 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); glutamate receptor activity (ortholog); group III metabotropic glutamate receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); anxiety disorder (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) NW_004955479 7520537 8279942 - 102019168 AGCD01056414;AGCD01056415;AGCD01056416;AGCD01056417;AGCD01056418;AGCD01056419;AGCD01056420;AGCD01056421;AGCD01056422;AGCD01056423;AGCD01056424;AGCD01056425;AGCD01056426;AGCD01056427;AGCD01056428;AGCD01056429;AGCD01056430;AGCD01056431;GBDI01207199;XM_005402348;XM_005402349;XM_005402350;XM_005402351;XM_005402352 XP_005402405;XP_005402406;XP_005402407;XP_005402408;XP_005402409 MODEL 8716021 protein-coding Ttll4 tubulin tyrosine ligase like 4 ENCODES a protein that exhibits protein-glutamic acid ligase activity (ortholog); protein-glutamic acid ligase activity, initiating (ortholog); tubulin binding (ortholog); INVOLVED IN regulation of blastocyst development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebrotendinous xanthomatosis (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955453 14679945 14720025 - 102005219 AGCD01044871;AGCD01044872;AGCD01044873;GBDK01078009;XM_013519796;XM_013519797;XM_013519798;XM_013519799;XM_013519800;XM_013519801 XP_013375250;XP_013375251;XP_013375252;XP_013375253;XP_013375254;XP_013375255 MODEL 8761287 protein-coding Slc52a3 solute carrier family 52 member 3 ENCODES a protein that exhibits riboflavin transmembrane transporter activity (ortholog); INVOLVED IN cellular response to heat (ortholog); intestinal absorption (ortholog); riboflavin transport (ortholog); ASSOCIATED WITH asthma (ortholog); Auditory Neuropathy (ortholog); Brown-Vialetto-Van Laere syndrome (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); nuclear membrane (ortholog) NW_004955596 48463 60239 - 102008045 AGCD01076504;GBCE01171650;GBCQ01179604;XM_005414682 XP_005414739 MODEL 8812140 protein-coding Plcb3 phospholipase C beta 3 ENCODES a protein that exhibits calmodulin binding (ortholog); G-protein beta-subunit binding (ortholog); G-protein gamma-subunit binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); inositol trisphosphate metabolic process (ortholog); phosphatidylinositol catabolic process (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphaq family; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic ulcer of skin (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of membrane (ortholog); cytosol (ortholog) NW_004955422 20810871 20827267 - 102017247 AGCD01023089;AGCD01023090;GBDF01280248;GBDK01071508;XM_005384625 XP_005384682 MODEL 9032840 protein-coding LOC102004375 olfactory receptor 51Q1-like NW_004955414 21317366 21326113 + 102004375 AGCD01015412;AGCD01015413;AGCD01015414;XM_005380083 XP_005380140 MODEL 9059268 protein-coding Dkk3 dickkopf WNT signaling pathway inhibitor 3 INVOLVED IN adrenal gland development (ortholog); negative regulation of aldosterone biosynthetic process (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955414 27466636 27507186 - 102011436 AGCD01015663;GBDK01021738;XM_005380293;XM_013512053 XP_005380350;XP_013367507 MODEL 8773776 protein-coding Ffar4 free fatty acid receptor 4 ENCODES a protein that exhibits arrestin family protein binding (ortholog); fatty acid binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); brown fat cell differentiation (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cilium (ortholog); endocytic vesicle (ortholog); endosome membrane (ortholog) NW_004955507 81910 110047 + 102028663 AGCD01065461;AGCD01065462;GBDK01117139;XM_005407515 XP_005407572 MODEL 8980382 protein-coding Igsf22 immunoglobulin superfamily member 22 NW_004955414 33364637 33378363 - 102023687 AGCD01015805;GBDF01144543;XM_013511745 XP_013367199 MODEL 8786970 protein-coding Lrrc23 leucine rich repeat containing 23 INVOLVED IN flagellated sperm motility (ortholog); radial spoke assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); sperm flagellum (ortholog) NW_004955413 4491443 4498283 + 102007100 AGCD01013619;GBDF01003541;XM_005378841;XM_005378842;XM_013511339;XM_013511341 XP_005378898;XP_005378899;XP_013366793;XP_013366795 MODEL 8821015 protein-coding LOC102007653 protocadherin gamma-A2 NW_004955415 12431046 12434469 - 102007653 AGCD01016196;GBDI01053094;XM_013512164 XP_013367618 MODEL 8826799 ncrna LOC102020095 uncharacterized LOC102020095 NW_004955462 3167635 3172265 - 102020095 AGCD01049195;GBDF01306975;XR_263092 MODEL 8744796 protein-coding Lgals4 galectin 4 ENCODES a protein that exhibits galactoside binding (ortholog); INVOLVED IN antibacterial peptide biosynthetic process (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955468 694831 701623 + 102009366 AGCD01051725;AGCD01051726;GBBH01043207;XM_005399830;XM_013522455 XP_005399887;XP_013377909 MODEL 9031261 protein-coding Wnt3a Wnt family member 3A ENCODES a protein that exhibits co-receptor binding (ortholog); frizzled binding (ortholog); identical protein binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); axis elongation involved in somitogenesis (ortholog); axon guidance (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH cervical cancer (ortholog); Experimental Mammary Neoplasms (ortholog); hypothyroidism (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); glutamatergic synapse (ortholog) NW_004955581 351375 382541 - 102016538 AGCD01075667;AGCD01075668;AGCD01075669;GBDK01185286;XM_005414244 XP_005414301 MODEL 8972022 protein-coding Pigq phosphatidylinositol glycan anchor biosynthesis class Q ENCODES a protein that exhibits phosphatidylinositol N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Deglutition Disorders (ortholog); developmental and epileptic encephalopathy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (ortholog) NW_004955442 16620009 16635308 - 102025181 AGCD01037904;AGCD01037905;GBDK01238495;XM_005391636;XM_013517847;XM_013517848;XM_013517849 XP_005391693;XP_013373301;XP_013373302;XP_013373303 MODEL 8787743 protein-coding CUNH22orf39 chromosome unknown C22orf39 homolog INVOLVED IN negative regulation of long-term synaptic potentiation (ortholog); regulation of synaptic plasticity (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN mitochondrion (ortholog); synapse (ortholog); synaptic cleft (ortholog) NW_004955442 18570867 18575809 + 102008776 AGCD01038010;GBCB01112046;XM_005391778;XM_013517637 XP_005391835;XP_013373091 MODEL 8857388 pseudo LOC102003317 mRNA-decapping enzyme 1A pseudogene NW_004955407 3818922 3820235 - 102003317 AGCD01006866 MODEL 9062235 protein-coding Prcc proline rich mitotic checkpoint control factor INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955545 2846116 2878247 + 102009653 AGCD01071925;AGCD01071926;AGCD01071927;GBBH01141585;XM_005411704;XM_013508208;XM_013508209 XP_005411761;XP_013363662;XP_013363663 MODEL 9000234 protein-coding Ghrh growth hormone releasing hormone ENCODES a protein that exhibits growth hormone-releasing hormone activity (ortholog); growth hormone-releasing hormone receptor binding (ortholog); INVOLVED IN adenohypophysis development (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autoimmune polyendocrine syndrome type 1 (ortholog); breast cancer (ortholog); FOUND IN axon terminus (ortholog); extracellular region (ortholog); perikaryon (ortholog) NW_004955422 24481246 24490529 + 102016066 AGCD01023220;GBDF01097802;XM_013513839 XP_013369293 MODEL 8868938 ncrna LOC102013950 uncharacterized LOC102013950 NW_004955426 6661147 6672152 + 102013950 AGCD01026162;AGCD01026163;GBDF01123929;XR_261194 MODEL 8754107 protein-coding Pygb glycogen phosphorylase B ENCODES a protein that exhibits 1,4-alpha-oligoglucan phosphorylase activity (ortholog); carbohydrate binding (ortholog); glycogen phosphorylase activity (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycogen metabolic process (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog) NW_004955415 31254240 31283651 + 102011761 AGCD01016672;GBBH01062054;XM_005380992 XP_005381049 MODEL 8769202 pseudo LOC102018962 protein RUFY3 pseudogene NW_004955432 5057988 5059354 + 102018962 AGCD01030757 MODEL 8991410 pseudo LOC102003668 uncharacterized LOC102003668 NW_004955423 22908358 22973034 - 102003668 AGCD01023981;AGCD01023982;AGCD01023983;AGCD01023984;AGCD01023985;AGCD01023986 MODEL 8860096 pseudo LOC102009590 major facilitator superfamily domain-containing protein 8-like NW_004955467 9964828 9982343 - 102009590 AGCD01051537;AGCD01051538 MODEL 8800297 protein-coding Smc1b structural maintenance of chromosomes 1B ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN meiotic cell cycle (ortholog); sister chromatid cohesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed nuclear chromosome (ortholog) NW_004955413 29709473 29765043 - 102005025 AGCD01014592;AGCD01014593;AGCD01014594;GBDF01007980;XM_005379490 XP_005379547 MODEL 8957457 protein-coding Stxbp4 syntaxin binding protein 4 INVOLVED IN cellular response to type II interferon (ortholog); DNA damage response (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); esophageal cancer (ortholog); FOUND IN phagocytic vesicle (ortholog) NW_004955451 7463285 7635690 - 102018790 AGCD01043238;AGCD01043239;AGCD01043240;AGCD01043241;AGCD01043242;AGCD01043243;GBDI01162249;XM_005394087;XM_013519379;XM_013519380;XM_013519381 XP_005394144;XP_013374833;XP_013374834;XP_013374835 MODEL 10385982 protein-coding LOC106147550 translation initiation factor IF-2-like NW_004955581 382882 383688 - 106147550 AGCD01075670;GBDJ01299803;XM_013509724 XP_013365178 MODEL 8876460 protein-coding LOC102009212 uncharacterized LOC102009212 NW_004955436 1320800 1334990 - 102009212 AGCD01033575;GBDK01015463;XM_013516600;XR_001234945;XR_001234946;XR_001234947;XR_001234948;XR_001234949;XR_261735;XR_261738 XP_013372054 MODEL 39133078 snrna U6 U6 spliceosomal RNA 8830870 ncrna LOC102021929 uncharacterized LOC102021929 NW_004955597 320901 337898 + 102021929 AGCD01076554;GBDF01041765;XR_001232548 MODEL 8816819 protein-coding LOC102020097 serpin B9-like NW_004955465 10275349 10285478 - 102020097 AGCD01050506;GBDK01011155;XM_013521778 XP_013377232 MODEL 9032219 pseudo LOC102007654 eukaryotic translation initiation factor 4 gamma 2 pseudogene NW_004955474 10505913 10506428 + 102007654 AGCD01054596;XM_005401468 MODEL 8757015 protein-coding Tmx2 thioredoxin related transmembrane protein 2 ENCODES a protein that exhibits disulfide oxidoreductase activity (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); regulation of mitochondrion organization (ortholog); ASSOCIATED WITH Neurodevelopmental Disorder with Microcephaly, Cortical Malformations, and Spasticity (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog); mitochondrial membrane (ortholog) NW_004955511 2632434 2641531 + 102021469 AGCD01066420;AGCD01066421;AGCD01066422;GBBH01065101;GBDF01045164;XM_005408009 XP_005408066 MODEL 8717328 protein-coding Spred3 sprouty related EVH1 domain containing 3 ENCODES a protein that exhibits stem cell factor receptor binding (ortholog); INVOLVED IN negative regulation of epithelial to mesenchymal transition (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of lens fiber cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955468 1030964 1039495 - 102014764 AGCD01051748;GBDF01220614;XM_005399849;XM_005399850;XM_005399851;XM_005399852;XM_013522465;XM_013522466;XM_013522467 XP_005399906;XP_005399907;XP_005399908;XP_005399909;XP_013377919;XP_013377920;XP_013377921 MODEL 8703794 protein-coding Shisa8 shisa family member 8 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955413 27328632 27330304 - 102012751 AGCD01014501;AGCD01014502;GBBH01127137;GBDI01328292;XM_013511364 XP_013366818 MODEL 8834737 ncrna LOC102015855 uncharacterized LOC102015855 NW_004955492 2416016 2425591 - 102015855 AGCD01060677;GBDF01208554;XR_264046 MODEL 39133548 snrna U4 U4 spliceosomal RNA 8803822 protein-coding Slc14a1 solute carrier family 14 member 1 (Kidd blood group) ENCODES a protein that exhibits urea channel activity (ortholog); urea transmembrane transporter activity (ortholog); water transmembrane transporter activity (ortholog); INVOLVED IN urea transmembrane transport (ortholog); urea transport (ortholog); water transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autoimmune hemolytic anemia (ortholog); cervical cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955402 31320897 31343774 + 102024403 AGCD01000785;GBDI01163529;XM_005372859;XM_005372860 XP_005372916;XP_005372917 MODEL 8933391 ncrna LOC102025104 uncharacterized LOC102025104 NW_004955467 4852986 4885256 + 102025104 AGCD01051375;XR_001236831;XR_263334 MODEL 8817562 protein-coding Terb2 telomere repeat binding bouquet formation protein 2 INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); homologous chromosome pairing at meiosis (ortholog); meiotic attachment of telomere to nuclear envelope (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); nonpapillary renal cell carcinoma (ortholog); spermatogenic failure 3 (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) NW_004955409 8352685 8371576 - 102025550 AGCD01009399;AGCD01009400;AGCD01009401;AGCD01009402;GBDF01156864;XM_005376747;XM_013510475 XP_005376804;XP_013365929 MODEL 8795757 pseudo LOC102017778 E3 ubiquitin-protein ligase RING2 pseudogene NW_004955421 538591 539793 - 102017778 AGCD01021566 MODEL 8700307 ncrna LOC102005079 uncharacterized LOC102005079 NW_004955437 3889822 3896136 - 102005079 AGCD01034353;AGCD01034354;GBDF01014278;XR_001235105;XR_001235106;XR_261849;XR_261850 MODEL 8879679 protein-coding LOC102018593 short transient receptor potential channel 2-like NW_004955414 19424090 19460149 + 102018593 AGCD01015315;AGCD01015316;AGCD01015317;AGCD01081640;GBDF01086082;XM_013511714 XP_013367168 MODEL 8869187 protein-coding Szrd1 SUZ RNA binding domain containing 1 ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); sarcoma (ortholog) NW_004955527 1938477 1961524 - 102027450 AGCD01069420;GBDI01020498;XM_005409829;XM_005409830;XM_005409831;XM_005409832;XM_013507385;XM_013507386 XP_005409886;XP_005409887;XP_005409888;XP_005409889;XP_013362839;XP_013362840 MODEL 8931695 protein-coding Kctd16 potassium channel tetramerization domain containing 16 ENCODES a protein that exhibits G protein-coupled neurotransmitter receptor activity (ortholog); INVOLVED IN behavioral fear response (ortholog); memory (ortholog); regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); stomach cancer (ortholog); FOUND IN postsynaptic membrane (ortholog); presynaptic membrane (ortholog); signaling receptor complex (ortholog) NW_004955415 9511749 9795134 - 102021004 AGCD01016106;AGCD01016107;AGCD01016108;AGCD01016109;AGCD01016110;GBDF01016348;XM_013512333;XM_013512334;XM_013512335 XP_013367787;XP_013367788;XP_013367789 MODEL 39132976 snrna U6 U6 spliceosomal RNA 9052930 protein-coding Ripply2 ripply transcriptional repressor 2 INVOLVED IN axis specification (ortholog); bone morphogenesis (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH spondylocostal dysostosis 6 (ortholog); Spondylocostal Dysostosis, Autosomal Recessive (ortholog) NW_004955411 11418744 11422766 + 102016142 AGCD01011819;GBDK01103623;XM_005377933 XP_005377990 MODEL 8768302 protein-coding Ppara peroxisome proliferator activated receptor alpha ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN behavioral response to nicotine (ortholog); cellular response to fructose stimulus (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); acute kidney tubular necrosis (ortholog); acute myeloid leukemia (ortholog); FOUND IN fibrillar center (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955413 30306563 30366245 + 102008082 AGCD01014605;AGCD01014606;AGCD01014607;AGCD01014608;GBDJ01304514;XM_005379496;XM_005379497;XM_005379498;XM_005379499;XM_005379500;XM_013511380 XP_005379553;XP_005379554;XP_005379555;XP_005379556;XP_005379557;XP_013366834 MODEL 8891956 protein-coding Scarf1 scavenger receptor class F member 1 ENCODES a protein that exhibits low-density lipoprotein particle binding (ortholog); scavenger receptor activity (ortholog); INVOLVED IN dendrite development (ortholog); neuron remodeling (ortholog); positive regulation of axon regeneration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); FOUND IN membrane (ortholog) NW_004955481 1534894 1547427 + 102018286 AGCD01056835;GBCB01022149;XM_005402613 XP_005402670 MODEL 8997979 ncrna LOC102010354 uncharacterized LOC102010354 NW_004955468 803292 804816 + 102010354 AGCD01051739;GBDF01089481;XR_263369 MODEL 39132368 snrna U6 U6 spliceosomal RNA 8887810 protein-coding Trrap transformation/transcription domain associated protein ENCODES a protein that exhibits chromatin binding (ortholog); transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); aphasia (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) NW_004955460 14641891 14761641 + 102003739 AGCD01048757;AGCD01048758;AGCD01048759;AGCD01048760;GBDF01050549;XM_005397925;XM_005397926;XM_005397928;XM_005397930;XM_013521171;XM_013521172;XM_013521173;XM_013521174;XM_013521175;XM_013521176;XM_013521177 XP_005397982;XP_005397983;XP_005397985;XP_005397987;XP_013376625;XP_013376626;XP_013376627;XP_013376628;XP_013376629;XP_013376630;XP_013376631 MODEL 8811292 protein-coding Grn granulin precursor ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); INVOLVED IN astrocyte activation involved in immune response (ortholog); blastocyst hatching (ortholog); chondrocyte proliferation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); atherosclerosis (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); endoplasmic reticulum (ortholog); endosome (ortholog) NW_004955451 17368600 17371981 + 102012599 AGCD01043745;GBDF01004036;XM_005394531;XM_005394532 XP_005394588;XP_005394589 MODEL 9068228 protein-coding Bicral BICRA like chromatin remodeling complex associated protein ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog); FOUND IN SWI/SNF complex (ortholog) NW_004955437 8841830 8896391 + 102024273 AGCD01034501;AGCD01034502;AGCD01034503;AGCD01034504;AGCD01034505;AGCD01034506;GBDI01047312;XM_005389724;XM_005389725 XP_005389781;XP_005389782 MODEL 8877016 protein-coding Wnt4 Wnt family member 4 ENCODES a protein that exhibits frizzled binding (ortholog); receptor ligand activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN adrenal gland development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH 46,XX Sex Reversal with Dysgenesis of Kidneys, Adrenals, and Lungs (ortholog); acute kidney failure (ortholog); Addison's disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular matrix (ortholog) NW_004955452 2319446 2344740 - 102006534 AGCD01043890;AGCD01043891;GBDF01041136;XM_005394734 XP_005394791 MODEL 8706189 pseudo LOC102021213 YEATS domain-containing protein 4-like NW_004955460 13231488 13238875 - 102021213 AGCD01048675;AGCD01048676 MODEL 8820231 protein-coding Slc5a1 solute carrier family 5 member 1 ENCODES a protein that exhibits alpha-glucoside transmembrane transporter activity (ortholog); D-glucose transmembrane transporter activity (ortholog); D-glucose:sodium symporter activity (ortholog); INVOLVED IN alpha-glucoside transport (ortholog); carbohydrate utilization (ortholog); chloride transmembrane transport (ortholog); PARTICIPATES IN lactose degradation pathway; sodium-glucose cotransporter mediated glucose transport pathway; trehalose degradation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) NW_004955455 6158773 6236950 + 102006541 AGCD01045776;AGCD01045777;AGCD01045778;AGCD01045779;AGCD01045780;AGCD01045781;AGCD01045782;GBDF01276541;XM_013520495 XP_013375949 MODEL 8764159 protein-coding LOC102004376 olfactory receptor 2D3-like NW_004955414 22643659 22649023 - 102004376 AGCD01015468;XM_013511769;XM_013511770 XP_013367223;XP_013367224 MODEL 8798820 protein-coding Plcb4 phospholipase C beta 4 ENCODES a protein that exhibits mitogen-activated protein kinase binding (ortholog); INVOLVED IN negative regulation of potassium ion transport (ortholog); phospholipase C-activating endothelin receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Auriculocondylar Syndrome (ortholog); Auriculocondylar Syndrome 1 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955415 19108120 19462084 + 102021754 AGCD01016463;AGCD01016464;AGCD01016465;AGCD01016466;AGCD01016467;AGCD01016468;AGCD01016469;AGCD01016470;GBCE01136647;JN633115;XM_005380864;XM_005380865;XM_005380866;XM_013512269;XM_013512270;XM_013512271 XP_005380921;XP_005380922;XP_005380923;XP_013367723;XP_013367724;XP_013367725 MODEL 8891615 protein-coding Dkkl1 dickkopf like acrosomal protein 1 INVOLVED IN canonical Wnt signaling pathway (ortholog); negative regulation of testosterone biosynthetic process (ortholog); penetration of zona pellucida (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN acrosomal vesicle (ortholog) NW_004955559 1445082 1449167 - 102018660 AGCD01073646;GBDF01002816;XM_005412889;XM_005412890 XP_005412946;XP_005412947 MODEL 39131559 protein-coding GHRH growth hormone releasing hormone 8727583 protein-coding Pygl glycogen phosphorylase L ENCODES a protein that exhibits 1,4-alpha-oligoglucan phosphorylase activity (ortholog); AMP binding (ortholog); ATP binding (ortholog); INVOLVED IN 5-phosphoribose 1-diphosphate biosynthetic process (ortholog); glucose homeostasis (ortholog); glycogen catabolic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen degradation pathway; glycogen metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog) NW_004955409 11970112 12007102 + 102014538 AGCD01009530;GBBH01062062;XM_005376795 XP_005376852 MODEL 8808180 pseudo LOC102012409 5-azacytidine-induced protein 2 pseudogene NW_004955409 26519198 26520981 - 102012409 AGCD01010189 MODEL 8855293 protein-coding Fga fibrinogen alpha chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); signaling receptor binding (ortholog); structural molecule activity (ortholog); INVOLVED IN acute-phase response (ortholog); blood coagulation (ortholog); blood coagulation, common pathway (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) NW_004955471 8806964 8814671 + 102008617 AGCD01053195;GBDF01130962;XM_005400932 XP_005400989 MODEL 8840166 protein-coding Lrrc24 leucine rich repeat containing 24 NW_004955454 3146712 3151828 - 102015921 AGCD01045057;GBDI01226178;XM_005395923;XM_005395928;XM_013520073;XM_013520074 XP_005395980;XP_005395985;XP_013375527;XP_013375528 MODEL 8856318 protein-coding Rwdd3 RWD domain containing 3 INVOLVED IN positive regulation of hypoxia-inducible factor-1alpha signaling pathway (ortholog); positive regulation of protein sumoylation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955435 398707 412476 + 102019947 AGCD01032725;AGCD01032726;GBCQ01096523;XM_005388762;XM_013516467 XP_005388819;XP_013371921 MODEL 8712631 ncrna LOC102009219 uncharacterized LOC102009219 NW_004955438 11481547 11499549 - 102009219 AGCD01035239;AGCD01035240;GBDF01306429;XR_261927 MODEL 8918593 ncrna LOC102021930 uncharacterized LOC102021930 NW_004955403 4854568 4862986 + 102021930 AGCD01001799;GBDF01251789;XR_259151 MODEL 8855266 protein-coding Pnn pinin, desmosome associated protein INVOLVED IN cell-cell adhesion (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); desmosome (ortholog) NW_004955409 22102016 22110505 - 102007867 AGCD01010013;AGCD01010014;AGCD01010015;GBCB01043496;GBDI01071652;XM_013510356 XP_013365810 MODEL 9053266 protein-coding Spring1 SREBF pathway regulator in golgi 1 INVOLVED IN positive regulation of SREBP signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955455 14331512 14349252 + 102024763 AGCD01046089;GBDJ01275881;XM_005396552 XP_005396609 MODEL 8971214 protein-coding Pigr polymeric immunoglobulin receptor ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); polymeric immunoglobulin binding (ortholog); polymeric immunoglobulin receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); epidermal growth factor receptor signaling pathway (ortholog); Fc receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog); recycling endosome membrane (ortholog) NW_004955406 42456450 42474489 - 102023664 AGCD01006708;GBCQ01039929;XM_005375408 XP_005375465 MODEL 8863296 protein-coding LOC102012785 histone H1x ENCODES a protein that exhibits structural constituent of chromatin (ortholog); INVOLVED IN chromosome condensation (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); COVID-19 (ortholog); lung adenocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955429 13671907 13673689 - 102012785 AGCD01028760;AGCD01028761;GBBH01032046;GBCE01001858;XM_005387002 XP_005387059 MODEL 8861263 pseudo LOC102003320 UDP-N-acetylhexosamine pyrophosphorylase-like NW_004955460 10516392 10518340 - 102003320 AGCD01048586 MODEL 8874925 protein-coding LOC102018966 zinc finger protein 124-like NW_004955524 346998 358842 - 102018966 AGCD01068675;XM_005409478 XP_005409535 MODEL 8905476 protein-coding Igsf3 immunoglobulin superfamily member 3 INVOLVED IN axonogenesis (ortholog); cell differentiation (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal atresia (ortholog) NW_004955435 19703952 19796065 - 102003688 AGCD01033436;AGCD01033437;GBCE01077748;GBDJ01317924;XM_005389042 XP_005389099 MODEL 8905162 protein-coding LOC102017785 60S acidic ribosomal protein P0-like NW_004955494 2559510 2560550 + 102017785 AGCD01061440;GBDF01135760;XM_013504925 XP_013360379 MODEL 8895246 protein-coding Smc2 structural maintenance of chromosomes 2 ENCODES a protein that exhibits chromatin binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cell development (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN condensed chromosome (ortholog); condensed nuclear chromosome (ortholog); condensin complex (ortholog) NW_004955419 22245843 22294508 - 102005808 AGCD01020299;GBDK01433995;XM_005382790 XP_005382847 MODEL 8721971 protein-coding Lgals8 galectin 8 ENCODES a protein that exhibits carbohydrate binding (ortholog); integrin binding (ortholog); INVOLVED IN cellular response to virus (ortholog); lymphatic endothelial cell migration (ortholog); plasma cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955492 3673233 3693777 - 102017993 AGCD01060699;GBBH01093652;XM_005404932;XM_005404934;XM_005404935;XM_005404936;XM_013504707;XM_013504708;XM_013504709 XP_005404989;XP_005404991;XP_005404992;XP_005404993;XP_013360161;XP_013360162;XP_013360163 MODEL 8863377 protein-coding Stxbp5 syntaxin binding protein 5 ENCODES a protein that exhibits syntaxin-1 binding (ortholog); INVOLVED IN exocytosis (ortholog); positive regulation of exocytosis (ortholog); regulation of exocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cytosol (ortholog); extrinsic component of neuronal dense core vesicle membrane (ortholog) NW_004955439 13580106 13743430 - 102017916 AGCD01035961;AGCD01035962;AGCD01035963;AGCD01035964;GBDJ01273771;GBDK01318993;XM_005390623;XM_005390624;XM_013517352;XM_013517353;XM_013517355;XM_013517356 XP_005390680;XP_005390681;XP_013372806;XP_013372807;XP_013372809;XP_013372810 MODEL 10306016 protein-coding LOC106147551 olfactory receptor 2B11-like NW_004955581 625013 626646 - 106147551 AGCD01075683;XM_013509725 XP_013365179 MODEL 39132978 snrna U6 U6 spliceosomal RNA 8997473 protein-coding Ttll5 tubulin tyrosine ligase like 5 ENCODES a protein that exhibits protein-glutamic acid ligase activity, elongating (ortholog); protein-glutamic acid ligase activity, initiating (ortholog); tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN fertilization (ortholog); flagellated sperm motility (ortholog); retina development in camera-type eye (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955612 109742 351255 + 102020184 AGCD01077180;GBDF01005906;GBDI01323312;XM_005414949;XM_005414950;XM_005414953;XM_005414957;XM_005414958;XM_005414959;XM_005414960;XM_013510126;XM_013510127 XP_005415006;XP_005415007;XP_005415010;XP_005415014;XP_005415015;XP_005415016;XP_005415017;XP_013365580;XP_013365581 MODEL 8787504 protein-coding Tbc1d9b TBC1 domain family member 9B INVOLVED IN regulation of cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955408 690827 724987 + 102029367 AGCD01007926;AGCD01007927;GBCE01099121;GBDJ01086601;XM_013507857 XP_013363311 MODEL 8746211 pseudo LOC102010355 protein tyrosine phosphatase type IVA 1 pseudogene NW_004955414 6560097 6560687 - 102010355 AGCD01014920;XM_005379741;XM_005379742;XM_005379743 MODEL 39132369 snrna U6 U6 spliceosomal RNA 8777259 pseudo LOC102022967 peptidyl-prolyl cis-trans isomerase A-like NW_004955441 936920 937475 + 102022967 AGCD01036742 MODEL 8843144 pseudo LOC102013951 eukaryotic translation initiation factor 5 pseudogene NW_004955502 5595726 5597390 - 102013951 AGCD01064373 MODEL 8866009 protein-coding Slc14a2 solute carrier family 14 member 2 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); urea transmembrane transporter activity (ortholog); INVOLVED IN urea transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955402 30877808 31283983 + 102023214 AGCD01000781;AGCD01000782;GBCQ01010210;XM_005372853;XM_005372854;XM_005372855;XM_005372856;XM_005372857;XM_013510367;XM_013510368;XM_013510374 XP_005372910;XP_005372911;XP_005372912;XP_005372913;XP_005372914;XP_013365821;XP_013365822;XP_013365828 MODEL 8852130 ncrna LOC102025106 uncharacterized LOC102025106 NW_004955413 19310741 19316830 + 102025106 AGCD01014198;XR_260088 MODEL 8766065 protein-coding Terf1 telomeric repeat binding factor 1 ENCODES a protein that exhibits ankyrin repeat binding (ortholog); DNA binding, bending (ortholog); double-stranded telomeric DNA binding (ortholog); INVOLVED IN meiotic telomere clustering (ortholog); negative regulation of DNA replication (ortholog); negative regulation of establishment of protein localization to telomere (ortholog); ASSOCIATED WITH breast cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear body (ortholog); nuclear telomere cap complex (ortholog) NW_004955444 7103282 7149450 - 102026167 AGCD01038891;AGCD01038892;AGCD01038893;AGCD01038894;AGCD01038895;AGCD01038896;GBDJ01318609;XM_013518223 XP_013373677 MODEL 8763434 protein-coding LOC102005080 transcription termination factor 3, mitochondrial-like NW_004955536 102197 103480 + 102005080 AGCD01070713;XM_013507725 XP_013363179 MODEL 8828733 protein-coding LOC102009596 natural cytotoxicity triggering receptor 3 ligand 1-like NW_004955414 32190761 32204203 + 102009596 AGCD01015777;GBBH01134981;XM_005380382;XM_005380383;XM_013512027 XP_005380439;XP_005380440;XP_013367481 MODEL 9034662 protein-coding Plcd1 phospholipase C delta 1 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to calcium ion (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955421 4856366 4880309 - 102012763 AGCD01021703;AGCD01021704;GBCE01115444;XM_005383723;XM_005383724;XM_005383725 XP_005383780;XP_005383781;XP_005383782 MODEL 8964463 protein-coding Szt2 SZT2 subunit of KICSTOR complex INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); central nervous system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); autistic disorder (ortholog); FOUND IN GATOR1 complex (ortholog); GATOR2 complex (ortholog); KICSTOR complex (ortholog) NW_004955537 2968839 3017863 + 102027676 AGCD01070940;GBCE01137134;XM_005410657;XM_005410658;XM_013507749 XP_005410714;XP_005410715;XP_013363203 MODEL 39133079 snrna U6 U6 spliceosomal RNA 9036934 pseudo LOC102012410 cullin-4B pseudogene NW_004955462 1327574 1331025 - 102012410 AGCD01049112 MODEL 8787692 pseudo LOC102007660 calcyclin-binding protein-like NW_004955418 14381275 14381936 + 102007660 AGCD01019075 MODEL 8864105 pseudo LOC102015859 U6 snRNA-associated Sm-like protein LSm6 pseudogene NW_004955422 26409372 26409612 + 102015859 AGCD01023288 MODEL 8827770 protein-coding Tmx3 thioredoxin related transmembrane protein 3 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); protein-disulfide reductase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955402 52271705 52315795 - 102030257 AGCD01001321;AGCD01001322;AGCD01001323;GBCB01075702;XM_005373044 XP_005373101 MODEL 8750727 protein-coding LOC102021933 protein asunder homolog NW_004956483 1036 3435 + 102021933 AGCD01079671;GBCC01016012;XM_013510229 XP_013365683 MODEL 8831303 pseudo LOC102009222 C-Myc-binding protein pseudogene NW_004955440 3127945 3130866 - 102009222 AGCD01036236 MODEL 8742122 protein-coding Rwdd4 RWD domain containing 4 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955403 25211506 25229830 + 102009136 AGCD01002283;AGCD01002284;AGCD01002285;GBDF01153464;XM_005373501;XM_005373502;XM_013513123;XM_013513131 XP_005373558;XP_005373559;XP_013368577;XP_013368585 MODEL 8982017 protein-coding Shisa9 shisa family member 9 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN regulation of short-term neuronal synaptic plasticity (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendritic spine membrane (ortholog); glutamatergic synapse (ortholog) NW_004955442 5537372 5817076 - 102021804 AGCD01037566;AGCD01037567;AGCD01037568;AGCD01037569;AGCD01037570;GBDF01237808;XM_005391145;XM_005391146 XP_005391202;XP_005391203 MODEL 9002044 protein-coding Ppard peroxisome proliferator activated receptor delta ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); fatty acid binding (ortholog); linoleic acid binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Acute-Phase Reaction (ortholog); alcohol-associated liver disease (ortholog); FOUND IN nucleus (ortholog) NW_004955437 3285281 3354099 + 102025837 AGCD01034305;AGCD01034306;AGCD01034307;AGCD01034308;AGCD01034309;GBBH01050550;GBDF01308373;XM_013516910 XP_013372364 MODEL 8951482 protein-coding Grp gastrin releasing peptide ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); INVOLVED IN cellular response to sodium phosphate (ortholog); mast cell degranulation (ortholog); negative regulation of transmission of nerve impulse (ortholog); ASSOCIATED WITH amnestic disorder (ortholog); Aortic Calcification (ortholog); cerebrovascular disease (ortholog); FOUND IN extracellular region (ortholog); neuron projection (ortholog); neuronal dense core vesicle (ortholog) NW_004955402 43382608 43393452 + 102013890 AGCD01001072;GBDJ01214066;XM_005373000 XP_005373057 MODEL 8792298 ncrna LOC102003669 uncharacterized LOC102003669 NW_004955497 6927114 6931241 + 102003669 AGCD01062651;GBDF01281346;XR_264207;XR_264208 MODEL 8799909 ncrna LOC102012792 uncharacterized LOC102012792 NW_004955514 558603 620325 + 102012792 AGCD01067014;AGCD01067015;AGCD01067016;GBDF01088853;XR_001231784;XR_264491 MODEL 8701356 pseudo LOC102021214 interferon regulatory factor 8 pseudogene NW_004955409 1904386 1909564 + 102021214 AGCD01009184 MODEL 8823913 protein-coding Wnt5a Wnt family member 5A ENCODES a protein that exhibits chemoattractant activity involved in axon guidance (ortholog); cytokine activity (ortholog); frizzled binding (ortholog); INVOLVED IN ameboidal-type cell migration (ortholog); anterior/posterior axis specification, embryo (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955430 5304817 5325684 - 102006806 AGCD01029259;AY463493;GBCE01188526;GBDJ01145960;XM_005387380 XP_005387437 MODEL 8813518 protein-coding Ess2 ess-2 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); nervous system development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); DiGeorge syndrome (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleus (ortholog) NW_004955442 18829037 18840542 + 102012369 AGCD01038021;AGCD01038022;GBDF01125719;XM_005391788 XP_005391845 MODEL 8881468 protein-coding LOC102018604 neutrophil gelatinase-associated lipocalin-like NW_004955419 330399 334636 - 102018604 AGCD01019576;XM_013513093 XP_013368547 MODEL 9023252 protein-coding Pigs phosphatidylinositol glycan anchor biosynthesis class S INVOLVED IN attachment of GPI anchor to protein (ortholog); GPI anchored protein biosynthesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); developmental and epileptic encephalopathy 95 (ortholog); esophageal cancer (ortholog); FOUND IN GPI-anchor transamidase complex (ortholog) NW_004955481 4583119 4597091 + 102003133 AGCD01056944;GBDF01124484;XM_005402749 XP_005402806 MODEL 8758463 pseudo LOC102020101 DET1 homolog pseudogene NW_004955412 22190147 22191725 - 102020101 AGCD01013039 MODEL 8911676 protein-coding Dlat dihydrolipoamide S-acetyltransferase ENCODES a protein that exhibits acetyltransferase activity (ortholog); dihydrolipoyllysine-residue acetyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN pyruvate catabolic process (ortholog); pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; Leigh disease pathway; ASSOCIATED WITH Athetosis (ortholog); brain disease (ortholog); cerebral palsy (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); pyruvate dehydrogenase complex (ortholog) NW_004955412 13718091 13746220 + 102026618 AGCD01012844;GBDF01122953;XM_005378107 XP_005378164 MODEL 8985873 protein-coding LOC102025110 taste receptor type 2 member 14-like NW_004955413 8203676 8204596 - 102025110 AGCD01013854;XM_005379632 XP_005379689 MODEL 8849300 protein-coding Lrrc25 leucine rich repeat containing 25 INVOLVED IN canonical NF-kappaB signal transduction (ortholog); connective tissue replacement involved in inflammatory response wound healing (ortholog); gene expression (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955524 3118305 3122125 + 102023067 AGCD01068859;GBBH01185481;XM_005409572 XP_005409629 MODEL 8941523 protein-coding LOC102005082 heat shock 70 kDa protein 1B NW_004955437 356898 358735 + 102005082 AGCD01034126;GBBH01030858;GBCB01006678;XM_005390107 XP_005390164 MODEL 39132706 snrna U6 U6 spliceosomal RNA 8796536 protein-coding CUNH22orf46 chromosome unknown C22orf46 homolog NW_004955413 27176899 27184107 + 102023682 AGCD01014497;GBDF01003456;XM_005379366 XP_005379423 MODEL 8716753 ncrna LOC102012411 uncharacterized LOC102012411 NW_004955411 2942448 2946613 + 102012411 AGCD01011526;GBCQ01140642;XR_259913 MODEL 39132980 snrna U6 U6 spliceosomal RNA 8813649 protein-coding Scarf2 scavenger receptor class F member 2 ENCODES a protein that exhibits scavenger receptor activity (ortholog); INVOLVED IN heterophilic cell-cell adhesion (ortholog); ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955442 18995253 19006499 - 102018441 AGCD01038028;AGCD01038029;GBBH01117350;GBDI01256676;XM_013517989 XP_013373443 MODEL 8761807 protein-coding Trub1 TruB pseudouridine synthase family member 1 ENCODES a protein that exhibits pre-miRNA binding (ortholog); pseudouridine synthase activity (ortholog); tRNA pseudouridine synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog); positive regulation of pre-miRNA processing (ortholog); tRNA modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955431 19840827 19877930 + 102020477 AGCD01030455;AGCD01030456;GBDF01225347;XM_005387841 XP_005387898 MODEL 10285549 ncrna LOC106147552 uncharacterized LOC106147552 NW_004955402 21996992 22009427 - 106147552 AGCD01000595;GBDI01087170;XR_001232482 MODEL 8871146 protein-coding Bid BH3 interacting domain death agonist ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN establishment of protein localization to membrane (ortholog); extrinsic apoptotic signaling pathway (ortholog); glial cell apoptotic process (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; intrinsic apoptotic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955454 5776656 5785500 - 102005665 AGCD01045187;AGCD01045188;GBCB01130016;GBDJ01272354;XM_013520182 XP_013375636 MODEL 8972168 pseudo LOC102003321 zinc finger protein 64 homolog NW_004955409 16616488 16619136 + 102003321 AGCD01009731 MODEL 9057686 pseudo LOC102004377 40S ribosomal protein S2-like NW_004955470 11454325 11473606 - 102004377 AGCD01052889 MODEL 8785636 protein-coding Sprn shadow of prion protein ENCODES a protein that exhibits nucleic acid binding (ortholog); INVOLVED IN protein import into nucleus (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); nucleolus (ortholog) NW_004955477 11058388 11062786 - 102007336 AGCD01055714;GBDF01232323;XM_005402074;XM_005402075;XR_001230816;XR_001230817 XP_005402131;XP_005402132 MODEL 8911117 protein-coding Slc5a10 solute carrier family 5 member 10 ENCODES a protein that exhibits fructose:sodium symporter activity (ortholog); mannose:sodium symporter activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog) NW_004955467 581120 654441 - 102005579 AGCD01051226;AGCD01051227;AGCD01051228;AGCD01051229;AGCD01051230;GBCQ01011485;XM_005399280;XM_005399282;XM_005399284;XM_005399285 XP_005399337;XP_005399339;XP_005399341;XP_005399342 MODEL 8784006 protein-coding Kctd17 potassium channel tetramerization domain containing 17 ENCODES a protein that exhibits cullin family protein binding (ortholog); identical protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN endoplasmic reticulum calcium ion homeostasis (ortholog); positive regulation of cilium assembly (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); genetic disease (ortholog); lung cancer (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) NW_004955413 23568540 23578292 + 102026847 AGCD01014332;GBDI01160354;XM_005379184;XM_005379185;XM_005379186;XM_005379187;XM_005379188;XM_005379191;XR_001233020 XP_005379241;XP_005379242;XP_005379243;XP_005379244;XP_005379245;XP_005379248 MODEL 8730919 protein-coding Slc15a1 solute carrier family 15 member 1 ENCODES a protein that exhibits channel inhibitor activity (ortholog); dipeptide transmembrane transporter activity (ortholog); peptide:proton symporter activity (ortholog); INVOLVED IN dipeptide import across plasma membrane (ortholog); metanephric proximal tubule development (ortholog); negative regulation of amino acid transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); membrane (ortholog) NW_004955404 11799370 11856854 + 102014734 AGCD01003446;GBDF01119603;XM_005374072 XP_005374129 MODEL 8718522 ncrna LOC102012794 uncharacterized LOC102012794 NW_004955515 468692 476022 + 102012794 AGCD01067199;GBDF01281122;XR_264518 MODEL 8716913 protein-coding LOC102018968 ubiquitin-conjugating enzyme E2 D2-like NW_004955525 1602357 1603209 - 102018968 AGCD01069046;GBDF01048294;XM_005409726;XR_001231960 XP_005409783 MODEL 8765147 ncrna LOC102017793 uncharacterized LOC102017793 NW_004955499 5632515 5635424 - 102017793 AGCD01063523;GBCQ01045824;XR_264219 MODEL 8836832 protein-coding Fgb fibrinogen beta chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); protein-folding chaperone binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); cell-matrix adhesion (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH cardiovascular system disease (ortholog); carotid artery disease (ortholog); cerebral cavernous malformation (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) NW_004955471 8824901 8832836 - 102009374 AGCD01053196;GBCB01021502;XM_005400935 XP_005400992 MODEL 8971374 protein-coding Igsf5 immunoglobulin superfamily member 5 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cell surface (ortholog) NW_004955407 38468873 38510040 + 102027815 AGCD01007807;AGCD01007808;GBCQ01017451;XM_005375775;XM_005375776;XM_005375777;XM_005375778 XP_005375832;XP_005375833;XP_005375834;XP_005375835 MODEL 39133549 snrna U4 U4 spliceosomal RNA 8859263 protein-coding Lgals9 galectin 9 ENCODES a protein that exhibits carbohydrate binding (ortholog); disaccharide binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); cellular response to virus (ortholog); ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955481 5234125 5249564 - 102011003 AGCD01056965;GBDI01000534;XM_013503499;XM_013503501;XM_013503502;XM_013503503;XM_013503504;XM_013503505;XM_013503506;XM_013503507;XM_013503508 XP_013358953;XP_013358955;XP_013358956;XP_013358957;XP_013358958;XP_013358959;XP_013358960;XP_013358961;XP_013358962 MODEL 8774274 protein-coding Stxbp5l syntaxin binding protein 5L INVOLVED IN glucose homeostasis (ortholog); negative regulation of insulin secretion (ortholog); positive regulation of protein secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN neuromuscular junction (ortholog); neuronal dense core vesicle (ortholog); plasma membrane (ortholog) NW_004955427 20390060 20760043 + 102028002 AGCD01027395;AGCD01027396;AGCD01027397;AGCD01027398;AGCD01027399;AGCD01027400;AGCD01027401;AGCD01027402;AGCD01027403;AGCD01027404;AGCD01027405;AGCD01027406;AGCD01027407;AGCD01027408;AGCD01027409;AGCD01027410;AGCD01027411;AGCD01027412;AGCD01027413;AGCD01027414;AGCD01027415;AGCD01027416;GBDF01027816;XM_005386476;XM_005386477;XM_005386478;XM_005386479;XM_005386480;XM_005386481;XM_005386482;XM_005386483;XM_013515230 XP_005386533;XP_005386534;XP_005386535;XP_005386536;XP_005386537;XP_005386538;XP_005386539;XP_005386540;XP_013370684 MODEL 8868405 protein-coding Tbca tubulin folding cofactor A ASSOCIATED WITH hypertrophic cardiomyopathy (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN microtubule cytoskeleton (ortholog) NW_004955425 23301457 23312740 + 102026656 AGCD01025841;AY533234;GBDI01059746;GBDJ01079535;XM_013514920 AAS59435;XP_013370374 MODEL 39132371 snrna U6 U6 spliceosomal RNA 8985766 ncrna LOC102022968 uncharacterized LOC102022968 NW_004955441 15133568 15142886 - 102022968 AGCD01037242;GBDF01045786;XR_001235313;XR_001235314;XR_001235315 MODEL 8818010 pseudo LOC102013952 tyrosine--tRNA ligase, cytoplasmic pseudogene NW_004955503 7176606 7183842 + 102013952 AGCD01064783 MODEL 8779373 protein-coding Pparg peroxisome proliferator activated receptor gamma ENCODES a protein that exhibits alpha-actinin binding (ortholog); arachidonate binding (ortholog); chromatin binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); beige fat cell differentiation (ortholog); BMP signaling pathway (ortholog); PARTICIPATES IN DNA modification pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955429 14814690 14936869 + 102018008 AGCD01028785;AGCD01028786;AGCD01028787;GBCQ01128594;XM_005387017;XM_005387018;XM_005387019 XP_005387074;XP_005387075;XP_005387076 MODEL 8949014 protein-coding Shisal1 shisa like 1 ASSOCIATED WITH lung cancer (ortholog) NW_004955413 29084441 29185524 - 102023138 AGCD01014576;AGCD01014577;AGCD01014578;GBCQ01175065;XM_005379460;XM_005379461;XM_005379462;XM_005379463 XP_005379517;XP_005379518;XP_005379519;XP_005379520 MODEL 8772384 protein-coding LOC102021215 olfactory receptor 10AC1-like NW_004955460 10681262 10683096 - 102021215 AGCD01048600;XM_013521116 XP_013376570 MODEL 9023047 protein-coding Ghrhr growth hormone releasing hormone receptor ENCODES a protein that exhibits growth factor binding (ortholog); growth hormone-releasing hormone receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN activation of adenylate cyclase activity (ortholog); adenohypophysis development (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); disorder of sexual development (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); membrane (ortholog) NW_004955410 32084210 32114844 + 102023563 AGCD01011335;GBCQ01127742;XM_005377509;XM_005377510;XM_005377511 XP_005377566;XP_005377567;XP_005377568 MODEL 8899639 protein-coding Wnt5b Wnt family member 5B ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN chondrocyte differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); positive regulation of cell migration (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); leiomyoma (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog) NW_004955454 4158648 4192709 + 102025082 AGCD01045118;AGCD01045119;GBDK01139056;XM_005395951;XM_005395953;XM_013520275;XM_013520276;XM_013520277 XP_005396008;XP_005396010;XP_013375729;XP_013375730;XP_013375731 MODEL 8864220 ncrna LOC102020105 uncharacterized LOC102020105 NW_004955469 5146014 5164443 - 102020105 AGCD01052344;AGCD01052345;GBDF01075348;XR_263431 MODEL 8971233 protein-coding Taar1 trace amine associated receptor 1 ENCODES a protein that exhibits G protein-coupled amine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); trace-amine receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN endomembrane system (ortholog); plasma membrane (ortholog) NW_004955436 13204876 13207928 - 102024376 AGCD01033855;XM_005389216 XP_005389273 MODEL 8937040 protein-coding Smc3 structural maintenance of chromosomes 3 ENCODES a protein that exhibits beta-tubulin binding (ortholog); chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN meiotic cell cycle (ortholog); mitotic spindle assembly (ortholog); regulation of DNA replication (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); autism spectrum disorder (ortholog); FOUND IN basement membrane (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955485 815281 848561 - 102015960 AGCD01058459;GBDK01140947;XM_005403754 XP_005403811 MODEL 8876337 protein-coding Krt77 keratin 77 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cornified envelope (ortholog); cytoskeleton (ortholog) NW_004955458 37218 49069 - 102006636 AGCD01047105;GBCC01000798;XM_005397125 XP_005397182 MODEL 9007734 ncrna LOC102007661 uncharacterized LOC102007661 NW_004955482 3985965 4000816 - 102007661 AGCD01057276;AGCD01057277;AGCD01057278;GBDF01089354;XR_001231002;XR_001231003;XR_263828 MODEL 10190939 protein-coding LOC102010356 uncharacterized LOC102010356 NW_004955470 374789 391272 - 102010356 AGCD01052609;GBCE01002380;XM_013522686 XP_013378140 MODEL 8747165 protein-coding Tmx4 thioredoxin related transmembrane protein 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear inner membrane (ortholog) NW_004955415 18055257 18100705 - 102020441 AGCD01016439;GBCE01114792;XM_005380861 XP_005380918 MODEL 9026129 protein-coding LOC102009223 cytochrome P450 1B1 ENCODES a protein that exhibits estrogen 16-alpha-hydroxylase activity (ortholog); estrogen 2-hydroxylase activity (ortholog); heme binding (ortholog); INVOLVED IN adrenal gland development (ortholog); angiogenesis (ortholog); arachidonate metabolic process (ortholog); PARTICIPATES IN phase I biotransformation pathway via cytochrome P450; ASSOCIATED WITH acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); adenoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog) NW_004955441 5803397 5812131 - 102009223 AGCD01036887;GBDF01179111;XM_005390882;XM_013517545 XP_005390939;XP_013372999 MODEL 9025142 protein-coding Ttll6 tubulin tyrosine ligase like 6 ENCODES a protein that exhibits protein-glutamic acid ligase activity (ortholog); protein-glutamic acid ligase activity, elongating (ortholog); protein-glutamic acid ligase activity, initiating (ortholog); INVOLVED IN microtubule bundle formation (ortholog); microtubule severing (ortholog); positive regulation of cilium movement (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955451 12474035 12509104 + 102003400 AGCD01043399;AGCD01043400;GBDK01191894;XM_013519119;XM_013519120 XP_013374573;XP_013374574 MODEL 8768717 protein-coding Trub2 TruB pseudouridine synthase family member 2 ENCODES a protein that exhibits pseudouridine synthase activity (ortholog); tRNA pseudouridine(55) synthase activity (ortholog); INVOLVED IN mitochondrial tRNA pseudouridine synthesis (ortholog); mRNA pseudouridine synthesis (ortholog); positive regulation of mitochondrial translation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); ribonucleoprotein granule (ortholog) NW_004955570 826776 837116 - 102024393 AGCD01074769;GBDI01220800;XM_005413537 XP_005413594 MODEL 9052817 protein-coding LOC102012414 cytochrome P450 4B1 ENCODES a protein that exhibits heterocyclic compound binding (ortholog); medium-chain fatty acid omega-1 hydroxylase activity (ortholog); medium-chain fatty acid omega-hydroxylase activity (ortholog); INVOLVED IN biphenyl metabolic process (ortholog); fatty acid oxidation (ortholog); xenobiotic metabolic process (ortholog); PARTICIPATES IN phase I biotransformation pathway via cytochrome P450; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955464 11539467 11556519 - 102012414 AGCD01050155;GBDF01188215;XM_005398649;XM_005398650 XP_005398706;XP_005398707 MODEL 8795683 protein-coding Bik BCL2 interacting killer ENCODES a protein that exhibits BH domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); male gonad development (ortholog); positive regulation of protein-containing complex assembly (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH ataxia telangiectasia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Bcl-2 family protein complex (ortholog); endomembrane system (ortholog); mitochondrial envelope (ortholog) NW_004955413 28277727 28294032 + 102015396 AGCD01014555;GBDK01226774;XM_005379433 XP_005379490 MODEL 8814861 pseudo LOC102004378 transaldolase pseudogene NW_004955414 21830353 21833227 + 102004378 AGCD01015433 MODEL 8976857 pseudo LOC102009597 mitochondrial fission factor-like NW_004955414 11395994 11396843 - 102009597 AGCD01015082 MODEL 8753263 protein-coding Terf2 telomeric repeat binding factor 2 ENCODES a protein that exhibits double-stranded telomeric DNA binding (ortholog); enzyme binding (ortholog); G-rich strand telomeric DNA binding (ortholog); INVOLVED IN axonal transport of messenger ribonucleoprotein complex (ortholog); in utero embryonic development (ortholog); negative regulation of cellular senescence (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); male germ cell nucleus (ortholog); nuclear body (ortholog) NW_004955484 7318813 7344221 + 102029400 AGCD01058325;AGCD01058326;AGCD01058327;GBDF01082280;XM_005403561;XM_005403563 XP_005403618;XP_005403620 MODEL 8829035 protein-coding LOC102018607 probable ATP-dependent RNA helicase DDX5 NW_004955420 170507 219822 - 102018607 AGCD01020535;AGCD01020536;AGCD01020537;AGCD01020538;GBBH01074208;XM_013513565;XR_001233769;XR_001233770;XR_001233771;XR_001233772;XR_001233773 XP_013369019 MODEL 9054907 protein-coding Pigt phosphatidylinositol glycan anchor biosynthesis class T ENCODES a protein that exhibits GPI anchor binding (ortholog); INVOLVED IN attachment of GPI anchor to protein (ortholog); GPI anchored protein biosynthesis (ortholog); neuron apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); GPI-anchor transamidase complex (ortholog) NW_004955445 11916898 11925578 - 102005645 AGCD01039724;AGCD01039725;GBDF01046377;XM_005392426 XP_005392483 MODEL 9000602 protein-coding Pygm glycogen phosphorylase, muscle associated ENCODES a protein that exhibits 1,4-alpha-oligoglucan phosphorylase activity (ortholog); AMP binding (ortholog); carbohydrate binding (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycogen metabolic process (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); brachydactyly (ortholog); cervical cancer (ortholog); FOUND IN sarcoplasmic reticulum (ortholog) NW_004955422 20411480 20424676 + 102030205 AGCD01023079;GBBH01100132;XM_005384564 XP_005384621 MODEL 8995749 protein-coding LOC102012796 vomeronasal type-2 receptor 116-like NW_004955524 3477585 3506250 - 102012796 AGCD01068903;AGCD01068904;AGCD01068905;GBDJ01017969;XM_013507196 XP_013362650 MODEL 8878516 protein-coding Kctd18 potassium channel tetramerization domain containing 18 ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955403 913621 923631 + 102006411 AGCD01001712;GBCE01029918;GBDI01063246;XM_013511934 XP_013367388 MODEL 9046145 pseudo LOC102015860 fibroblast growth factor 4-like NW_004955422 14837357 14843688 - 102015860 AGCD01022870 MODEL 8703873 protein-coding Dlc1 DLC1 Rho GTPase activating protein ENCODES a protein that exhibits GTPase activator activity (ortholog); phospholipase binding (ortholog); phospholipase C activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to insulin stimulus (ortholog); focal adhesion assembly (ortholog); PARTICIPATES IN Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); colorectal cancer (ortholog); FOUND IN actin filament (ortholog); caveola (ortholog); cortical actin cytoskeleton (ortholog) NW_004955463 3599415 3981187 + 102014429 AGCD01049591;AGCD01049592;AGCD01049593;AGCD01049594;AGCD01049595;AGCD01049596;AGCD01049597;AGCD01049598;AGCD01049599;AGCD01049600;GBCE01115032;XM_005398346;XM_013521500;XM_013521501;XM_013521502 XP_005398403;XP_013376954;XP_013376955;XP_013376956 MODEL 39133428 snrna U4 U4 spliceosomal RNA 8731070 protein-coding Igsf6 immunoglobulin superfamily member 6 ASSOCIATED WITH allergic contact dermatitis (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955493 1109910 1119806 - 102017349 AGCD01060878;GBDK01072125;XM_005405086 XP_005405143 MODEL 8923639 protein-coding LOC102021936 Ig-like V-type domain-containing protein FAM187A NW_004955451 17693409 17695551 + 102021936 AGCD01043767;GBCE01037287;XM_005394557 XP_005394614 MODEL 39132982 snrna U6 U6 spliceosomal RNA 8894049 protein-coding Pigu phosphatidylinositol glycan anchor biosynthesis class U ENCODES a protein that exhibits GPI anchor binding (ortholog); INVOLVED IN attachment of GPI anchor to protein (ortholog); GPI anchor biosynthetic process (ortholog); GPI anchored protein biosynthesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); genetic disease (ortholog); FOUND IN GPI-anchor transamidase complex (ortholog); plasma membrane (ortholog) NW_004955422 26685060 26774261 + 102022399 AGCD01023296;AGCD01023297;AGCD01023298;AGCD01023299;AGCD01023300;AGCD01023301;GBDF01124039;XM_005384827 XP_005384884 MODEL 9067303 ncrna LOC102003670 uncharacterized LOC102003670 NW_004955424 25890232 25893041 - 102003670 AGCD01025056;GBDF01023092;XR_261109 MODEL 150537105 scarna SCARNA1 Small Cajal body specific RNA 1 10291900 ncrna LOC106147264 uncharacterized LOC106147264 NW_004955536 3026086 3027892 + 106147264 AGCD01070806;GBDK01171519;XR_001232065 MODEL 8886179 protein-coding LOC102003326 histone H2A type 1-J-like NW_004955465 13124247 13124484 + 102003326 AGCD01050588;XM_005399005 XP_005399062 MODEL 8765186 protein-coding Stxbp6 syntaxin binding protein 6 INVOLVED IN SNARE complex assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955409 35096888 35358571 + 102020429 AGCD01010415;AGCD01010416;AGCD01010417;AGCD01010418;AGCD01010419;AGCD01010420;AGCD01010421;GBBH01193023;XM_005376982 XP_005377039 MODEL 9050946 protein-coding Esx1 ESX homeobox 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle (ortholog); ASSOCIATED WITH lung cancer (ortholog); spermatogenic failure 57 (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955548 1087441 1095070 - 102004647 AGCD01072356;AGCD01072357;AGCD01072358;GBDF01189839;XM_005412009 XP_005412066 MODEL 10081585 protein-coding Sprr4 small proline rich protein 4 FOUND IN cytosol (ortholog) NW_004955592 424261 426415 - 106147604 AGCD01076313;XM_013509983 XP_013365437 MODEL 8783512 protein-coding Tbcb tubulin folding cofactor B ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955468 2477682 2494122 - 102010243 AGCD01051821;AGCD01051822;AGCD01051823;GBBH01062602;GBDK01084074;XM_005399923 XP_005399980 MODEL 39133080 snrna U6 U6 spliceosomal RNA 8714120 ncrna LOC102013953 uncharacterized LOC102013953 NW_004955504 3387462 3397789 + 102013953 AGCD01064868;GBCB01085852;XR_264292 MODEL 8941225 protein-coding Slc5a11 solute carrier family 5 member 11 ENCODES a protein that exhibits myo-inositol transmembrane transporter activity (ortholog); INVOLVED IN myo-inositol transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN apical plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955493 3259646 3317694 + 102027540 AGCD01060985;AGCD01060986;AGCD01060987;AGCD01060988;GBCQ01143291;XM_005405114;XM_005405115;XM_005405116;XM_005405117 XP_005405171;XP_005405172;XP_005405173;XP_005405174 MODEL 9023358 protein-coding Slc15a2 solute carrier family 15 member 2 ENCODES a protein that exhibits dipeptide transmembrane transporter activity (ortholog); high-affinity oligopeptide transmembrane transporter activity (ortholog); peptide:proton symporter activity (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); dipeptide import across plasma membrane (ortholog); dipeptide transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical plasma membrane (ortholog); membrane (ortholog); phagocytic vesicle membrane (ortholog) NW_004955427 21221778 21255725 + 102005279 AGCD01027436;AGCD01027437;AGCD01027438;AGCD01027439;GBCE01001662;XM_005386496;XM_013515099;XM_013515100 XP_005386553;XP_013370553;XP_013370554 MODEL 8997884 protein-coding Lrrc26 leucine rich repeat containing 26 ENCODES a protein that exhibits potassium channel activator activity (ortholog); potassium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955513 5178631 5180462 - 102005405 AGCD01066961;GBDI01129411;XM_005408584 XP_005408641 MODEL 8766178 ncrna LOC102005085 uncharacterized LOC102005085 NW_004955442 14237107 14240594 + 102005085 AGCD01037806;GBDF01150434;XR_001235364;XR_262140 MODEL 9056834 protein-coding LOC102025111 T-cell ecto-ADP-ribosyltransferase 1-like NW_004955414 18887480 18897593 - 102025111 AGCD01015292;GBDJ01402723;XM_005379987 XP_005380044 MODEL 8872496 protein-coding Esyt1 extended synaptotagmin 1 ENCODES a protein that exhibits identical protein binding (ortholog); phospholipid transfer activity (ortholog); INVOLVED IN intermembrane lipid transfer (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955458 3732968 3746856 + 102026723 AGCD01047340;AGCD01047341;AGCD01047342;GBCQ01033561;GBDK01346750;XM_013520965 XP_013376419 MODEL 39132707 snrna U6 U6 spliceosomal RNA 8961829 protein-coding Rxfp1 relaxin family peptide receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cell differentiation (ortholog); ASSOCIATED WITH endometriosis (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog) NW_004955471 8860906 8963016 - 102009710 AGCD01053196;GBDJ01229708;XM_005400936;XM_005400937;XM_005400938;XM_013522859;XM_013522860;XM_013522861 XP_005400993;XP_005400994;XP_005400995;XP_013378313;XP_013378314;XP_013378315 MODEL 39131422 protein-coding TAAR2 trace amine associated receptor 2 (gene/pseudogene) 39132372 snrna U6 U6 spliceosomal RNA 8751807 protein-coding Grpel1 GrpE like 1, mitochondrial ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); ATPase activator activity (ortholog); ATPase binding (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); middle cerebral artery infarction (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955514 3459774 3467279 + 102015229 AGCD01067096;GBBH01061487;XM_005408795 XP_005408852 MODEL 9031136 protein-coding LOC102010358 olfactory receptor 52H1-like NW_004955414 21638413 21639375 + 102010358 AGCD01015425;XM_005380101 XP_005380158 MODEL 8964142 ncrna LOC102009224 uncharacterized LOC102009224 NW_004955441 12505345 12519740 + 102009224 AGCD01037123;GBDF01308251;XR_262074 MODEL 9000372 pseudo LOC102021218 glycerophosphodiester phosphodiesterase 1 pseudogene NW_004955463 13811148 13812387 + 102021218 AGCD01049888 MODEL 8891795 protein-coding Ppargc1a PPARG coactivator 1 alpha ENCODES a protein that exhibits alpha-tubulin binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); adipose tissue development (ortholog); autophagy of mitochondrion (ortholog); PARTICIPATES IN aldosterone signaling pathway; mTOR signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); acute kidney failure (ortholog); acute myeloid leukemia (ortholog); FOUND IN apical dendrite (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955480 543397 1188376 + 102026424 AGCD01056582;AGCD01056583;AGCD01056584;AGCD01056585;AGCD01056586;AGCD01056587;AGCD01056588;AGCD01056589;AGCD01056590;AGCD01056591;AGCD01056592;GBCQ01054630;XM_005402462;XM_005402463;XM_005402464;XM_013503332 XP_005402519;XP_005402520;XP_005402521;XP_013358786 MODEL 8736565 pseudo LOC102017795 5-azacytidine-induced protein 2 pseudogene NW_004955503 1186824 1187899 + 102017795 AGCD01064558 MODEL 9061747 protein-coding LOC102018969 glutathione S-transferase B-like NW_004955435 13090324 13096199 + 102018969 AGCD01033181;AGCD01033182;AGCD01033183;GBCQ01003519;XM_013516462 XP_013371916 MODEL 8777516 protein-coding Bin1 bridging integrator 1 ENCODES a protein that exhibits actin filament binding (ortholog); aspartic-type endopeptidase inhibitor activity (ortholog); GTPase binding (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); enucleation (ortholog); lipid tube assembly (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autosomal recessive centronuclear myopathy (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); axon terminus (ortholog) NW_004955459 3376149 3423157 + 102006639 AGCD01048015;GBDI01010869;XM_005397618;XM_005397619;XM_005397620;XM_005397621;XM_005397622;XM_005397623;XM_005397624;XM_005397625;XM_005397626;XM_005397627;XM_005397628;XM_005397629;XM_005397630;XM_005397631;XM_005397632;XM_005397633;XM_005397634;XM_013521077 XP_005397675;XP_005397676;XP_005397677;XP_005397678;XP_005397679;XP_005397680;XP_005397681;XP_005397682;XP_005397683;XP_005397684;XP_005397685;XP_005397686;XP_005397687;XP_005397688;XP_005397689;XP_005397690;XP_005397691;XP_013376531 MODEL 8926926 protein-coding Ghrl ghrelin and obestatin prepropeptide ENCODES a protein that exhibits ghrelin receptor binding (ortholog); growth hormone-releasing hormone activity (ortholog); hormone activity (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); adult feeding behavior (ortholog); decidualization (ortholog); PARTICIPATES IN ghrelin system pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); bone resorption disease (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955561 1676475 1682205 - 102018995 AGCD01073861;GBDK01306493;XM_005413069;XM_013509094 XP_005413126;XP_013364548 MODEL 8865810 protein-coding Shisal2a shisa like 2A ASSOCIATED WITH urinary bladder cancer (ortholog) NW_004955464 6520481 6547181 - 102016574 AGCD01050029;AGCD01050030;GBDJ01051237;XM_005398572;XM_005398573 XP_005398629;XP_005398630 MODEL 8813080 protein-coding Fgd1 FYVE, RhoGEF and PH domain containing 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cytoskeleton organization (ortholog); filopodium assembly (ortholog); ASSOCIATED WITH Aarskog syndrome (ortholog); acute myeloid leukemia (ortholog); amblyopia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955475 1703374 1752710 - 102022074 AGCD01054758;GBDI01024804;XM_013502823 XP_013358277 MODEL 8812874 protein-coding Terf2ip TERF2 interacting protein ENCODES a protein that exhibits telomeric repeat DNA binding (ortholog); INVOLVED IN negative regulation of DNA recombination at telomere (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); protection from non-homologous end joining at telomere (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955484 1917902 1924482 - 102017021 AGCD01058073;GBDK01235374;XM_005403434 XP_005403491 MODEL 8830812 protein-coding LOC102020107 translation initiation factor IF-2-like NW_004955414 25453079 25458691 - 102020107 AGCD01015607;GBCE01049567;XM_005380526 XP_005380583 MODEL 9040989 protein-coding CUNH2orf42 chromosome unknown C2orf42 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955424 14932677 14975332 + 102008871 AGCD01024665;AGCD01024666;AGCD01024667;AGCD01024668;AGCD01024669;AGCD01024670;AGCD01024671;GBDF01005965;XM_005385627;XM_005385628;XM_005385629;XM_005385630;XM_013514642;XM_013514644 XP_005385684;XP_005385685;XP_005385686;XP_005385687;XP_013370096;XP_013370098 MODEL 8719921 ncrna LOC102012800 uncharacterized LOC102012800 NW_004955436 20441094 20445316 - 102012800 AGCD01034024;GBCB01036539;XR_261802 MODEL 8798948 protein-coding Lgalsl galectin like ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955424 19955858 19962170 - 102028437 AGCD01024840;GBCE01013010;GBDI01217236;XM_013514741 XP_013370195 MODEL 39133429 snrna U4 U4 spliceosomal RNA 8982326 protein-coding Krt78 keratin 78 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cornified envelope (ortholog) NW_004955458 138622 146264 - 102008601 AGCD01047106;GBDI01256250;XM_005397131 XP_005397188 MODEL 39132708 snrna U6 U6 spliceosomal RNA 8994895 ncrna LOC102007675 uncharacterized LOC102007675 NW_004955425 7720216 7730019 + 102007675 AGCD01025391;AGCD01025392;GBDK01047433;XR_261136 MODEL 8849034 pseudo LOC102012421 5-azacytidine-induced protein 2 pseudogene NW_004955414 22550353 22553184 + 102012421 AGCD01015461 MODEL 8864656 protein-coding Ttll7 tubulin tyrosine ligase like 7 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); protein-glutamic acid ligase activity, elongating (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); melanoma (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary basal body (ortholog); perikaryon (ortholog) NW_004955423 9819049 9956744 + 102006680 AGCD01023668;GBBH01205865;GBDF01002743;XM_005385172;XM_013514540 XP_005385229;XP_013369994 MODEL 8957456 pseudo LOC102018614 olfactory receptor 7E24-like NW_004955495 629283 630229 - 102018614 AGCD01061645 MODEL 8738277 protein-coding LOC102004387 C-C motif chemokine 8-like NW_004955481 9082226 9083739 + 102004387 AGCD01057094;GBBH01002161;XM_005402840 XP_005402897 MODEL 8943156 protein-coding Wnt6 Wnt family member 6 INVOLVED IN axis specification (ortholog); branching involved in ureteric bud morphogenesis (ortholog); epithelial-mesenchymal cell signaling (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog) NW_004955453 14547427 14560001 - 102003202 AGCD01044869;AGCD01044870;GBBH01046953;GBDJ01266063;XM_005395621 XP_005395678 MODEL 8788689 protein-coding Pygo1 pygopus family PHD finger 1 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); hematopoietic progenitor cell differentiation (ortholog); kidney development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955409 446548 459139 + 102020222 AGCD01009148;AGCD01009149;GBBH01036528;GBCB01072777;XM_013510021 XP_013365475 MODEL 9054331 pseudo LOC102013956 eukaryotic translation initiation factor 2 subunit 2 pseudogene NW_004955428 10433744 10434754 - 102013956 AGCD01027867 MODEL 9013223 protein-coding Kctd19 potassium channel tetramerization domain containing 19 INVOLVED IN male meiotic nuclear division (ortholog); ASSOCIATED WITH Cerebral Visual Impairment and Intellectual Disability (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955484 9282976 9344882 + 102006915 AGCD01058414;AGCD01058415;GBDF01046564;XM_005403664;XM_013503893;XM_013503894 XP_005403721;XP_013359347;XP_013359348 MODEL 8899733 protein-coding Smc4 structural maintenance of chromosomes 4 ENCODES a protein that exhibits chromatin binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cell development (ortholog); cerebral cortex development (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed nuclear chromosome (ortholog); condensin complex (ortholog) NW_004955448 10926653 10960624 + 102003919 AGCD01041504;AGCD01041505;AGCD01041506;AGCD01041507;GBBH01229940;GBDF01088763;XM_005393119 XP_005393176 MODEL 9023434 protein-coding Tsbp1 testis expressed basic protein 1 NW_004955437 830178 915199 - 102007696 AGCD01034169;AGCD01034170;AGCD01034171;AGCD01034172;AGCD01034173;AGCD01034174;GBDF01082664;XM_013516714;XM_013516715;XM_013516716;XM_013516717 XP_013372168;XP_013372169;XP_013372170;XP_013372171 MODEL 8720912 protein-coding Tnc tenascin C ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); syndecan binding (ortholog); INVOLVED IN bud outgrowth involved in lung branching (ortholog); cellular response to prostaglandin D stimulus (ortholog); cellular response to retinoic acid (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH allergic asthma (ortholog); allergic conjunctivitis (ortholog); Allergic Rhinoconjunctivitis (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular matrix of synaptic cleft (ortholog) NW_004955419 12569620 12662897 + 102005935 AGCD01019976;AGCD01019977;AGCD01019978;GBCE01000789;GBCQ01126227;XM_013513252;XM_013513253 XP_013368706;XP_013368707 MODEL 8753974 protein-coding Dld dihydrolipoamide dehydrogenase ENCODES a protein that exhibits dihydrolipoyl dehydrogenase (NADH) activity (ortholog); flavin adenine dinucleotide binding (ortholog); lipoamide binding (ortholog); INVOLVED IN 2-oxoglutarate decarboxylation to succinyl-CoA (ortholog); 2-oxoglutarate metabolic process (ortholog); branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN acrosomal matrix (ortholog); branched-chain alpha-ketoacid dehydrogenase complex (ortholog); cilium (ortholog) NW_004955410 12212981 12238561 + 102008070 AGCD01010846;AGCD01010847;AGCD01010848;AGCD01010849;AGCD01010850;GBCE01096063;XM_005377291;XM_013510668 XP_005377348;XP_013366122 MODEL 9006095 protein-coding Esyt2 extended synaptotagmin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); identical protein binding (ortholog); INVOLVED IN fibroblast migration (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955579 971556 1052575 - 102006404 AGCD01075561;AGCD01075562;AGCD01075563;AGCD01075564;GBDJ01073043;XM_013509669 XP_013365123 MODEL 730469444 scarna SCARNA1 Small Cajal body specific RNA 1 8769339 protein-coding Taar5 trace amine associated receptor 5 ENCODES a protein that exhibits trace-amine receptor activity (ortholog); trimethylamine receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cognition (ortholog); sensory perception of chemical stimulus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955436 13152345 13153358 - 102023071 AGCD01033854;XM_005389213 XP_005389270 MODEL 39132373 snrna U6 U6 spliceosomal RNA 8814255 protein-coding LOC102009604 laforin NW_004955477 658249 660233 - 102009604 AGCD01055492;AGCD01055493;GBDJ01162178;XM_005402077 XP_005402134 MODEL 10308944 ncrna LOC106147265 uncharacterized LOC106147265 NW_004955408 27117178 27118621 + 106147265 AGCD01008677;GBDJ01219707;XR_001232072 MODEL 8821023 protein-coding Krt79 keratin 79 ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955458 121681 132775 - 102008292 AGCD01047106;GBCQ01115306;XM_005397130 XP_005397187 MODEL 8907471 protein-coding LOC102003327 uncharacterized LOC102003327 NW_004955466 5485952 5548346 + 102003327 AGCD01050881;AGCD01050882;GBDF01043768;XM_005399132;XM_005399133;XM_005399134;XM_005399135;XM_013522017;XM_013522018 XP_005399189;XP_005399190;XP_005399191;XP_005399192;XP_013377471;XP_013377472 MODEL 8842722 protein-coding Tbcc tubulin folding cofactor C ENCODES a protein that exhibits GTPase activator activity (ortholog); GTPase activity (ortholog); INVOLVED IN post-chaperonin tubulin folding pathway (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); photoreceptor connecting cilium (ortholog) NW_004955437 8808021 8809598 - 102023951 AGCD01034499;GBBH01140218;XM_005415286 XP_005415343 MODEL 8942927 protein-coding Sprtn SprT-like N-terminal domain ENCODES a protein that exhibits double-stranded DNA binding (ortholog); K63-linked polyubiquitin modification-dependent protein binding (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN DNA damage response (ortholog); interstrand cross-link repair (ortholog); positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog); genetic disease (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nuclear speck (ortholog) NW_004955492 7463228 7476683 - 102007440 AGCD01060798;GBDF01044538;XM_005404971;XM_013504683;XM_013504684;XM_013504685;XM_013504686 XP_005405028;XP_013360137;XP_013360138;XP_013360139;XP_013360140 MODEL 9032398 ncrna LOC102012422 uncharacterized LOC102012422 NW_004955474 1783853 1789261 + 102012422 AGCD01054268;GBDK01242651;XR_263587 MODEL 9000478 protein-coding Lrrc27 leucine rich repeat containing 27 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955477 9970199 10005562 + 102024797 AGCD01055688;GBDF01045980;XM_005402041;XM_013503095;XM_013503096;XM_013503097;XM_013503098;XM_013503099;XM_013503100 XP_005402098;XP_013358549;XP_013358550;XP_013358551;XP_013358552;XP_013358553;XP_013358554 MODEL 8730900 protein-coding Slc5a12 solute carrier family 5 member 12 ENCODES a protein that exhibits lactate transmembrane transporter activity (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955476 6067657 6117983 - 102014134 AGCD01055322;AGCD01055323;GBCQ01008443;XM_005401744 XP_005401801 MODEL 8931245 protein-coding Bin2 bridging integrator 2 ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); phagocytosis, engulfment (ortholog); plasma membrane tubulation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); phagocytic cup (ortholog); plasma membrane (ortholog) NW_004955547 1774330 1798031 - 102016523 AGCD01072246;GBDF01006942;GBDK01146360;XM_013508468 XP_013363922 MODEL 8838530 protein-coding Tert telomerase reverse transcriptase ENCODES a protein that exhibits DNA binding (ortholog); DNA polymerase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); DNA biosynthetic process (ortholog); DNA strand elongation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955504 649248 669796 - 102020268 AGCD01064824;AGCD01064825;GBDI01054113;GBDI01187681;XM_013505898 XP_013361352 MODEL 9002603 protein-coding Shisal2b shisa like 2B NW_004955446 4268531 4289011 - 102022341 AGCD01040034;GBDI01277575;XM_005392635 XP_005392692 MODEL 39132986 snrna U6 U6 spliceosomal RNA 8718756 protein-coding Fgd2 FYVE, RhoGEF and PH domain containing 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol phosphate binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); nucleus (ortholog) NW_004955437 6026087 6038740 - 102021388 AGCD01034413;AGCD01034414;GBDK01184372;XM_005389626;XM_005389627;XM_005389628;XM_013516942;XM_013516943 XP_005389683;XP_005389684;XP_005389685;XP_013372396;XP_013372397 MODEL 8827848 protein-coding LOC102003671 zinc finger protein 431-like NW_004955499 450865 478358 - 102003671 AGCD01063232;GBDI01258841;XM_005406501;XM_013505568;XM_013505569 XP_005406558;XP_013361022;XP_013361023 MODEL 8948405 protein-coding LOC102021937 alcohol dehydrogenase 4 NW_004955405 9357258 9377324 - 102021937 AGCD01004771;GBDI01329017;XM_005374294 XP_005374351 MODEL 8856231 protein-coding Rxfp2 relaxin family peptide receptor 2 ENCODES a protein that exhibits peptide hormone binding (ortholog); protein-hormone receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); male gonad development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cryptorchidism (ortholog); disorder of sexual development (ortholog); FOUND IN plasma membrane (ortholog) NW_004955431 14050537 14105852 - 102016505 AGCD01030318;AGCD01030319;GBDF01231821;XM_013515731 XP_013371185 MODEL 39133430 snrna U4 U4 spliceosomal RNA 8831578 protein-coding Pigv phosphatidylinositol glycan anchor biosynthesis class V ENCODES a protein that exhibits alpha-1,6-mannosyltransferase activity (ortholog); dol-P-Man:Man(1)GlcN-acyl-PI alpha-1,6-mannosyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955452 6128262 6139204 + 102021833 AGCD01044089;GBDK01013138;XM_005394872;XM_005394873;XM_005394874;XM_005394875;XM_005394876;XM_013519561;XM_013519562;XM_013519563;XM_013519564 XP_005394929;XP_005394930;XP_005394931;XP_005394932;XP_005394933;XP_013375015;XP_013375016;XP_013375017;XP_013375018 MODEL 8918115 pseudo LOC102010366 regulator of nonsense transcripts 2 pseudogene NW_004955416 11225709 11227659 + 102010366 AGCD01017181 MODEL 8776090 protein-coding Lgi1 leucine rich glioma inactivated 1 ENCODES a protein that exhibits receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); neuron projection development (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy (ortholog); Breast Cancer, Familial (ortholog); developmental and epileptic encephalopathy 121 (ortholog); FOUND IN axon initial segment (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955507 268032 304949 + 102003163 AGCD01065465;AGCD01065466;GBBH01057240;XM_005407523;XM_005407524;XM_013506244 XP_005407580;XP_005407581;XP_013361698 MODEL 8705061 ncrna LOC102009225 uncharacterized LOC102009225 NW_004955549 375942 379270 + 102009225 AGCD01072423;GBDF01288013;XR_264913 MODEL 8857889 protein-coding Grpel2 GrpE like 2, mitochondrial ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); INVOLVED IN protein import into mitochondrial matrix (ortholog); regulation of cardiolipin metabolic process (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955853 1443 9278 + 102019557 AGCD01078493;GBBH01131678;GBCE01113023;XM_005415136 XP_005415193 MODEL 39133081 snrna U6 U6 spliceosomal RNA 8814128 protein-coding LOC102005087 protein phosphatase 1 regulatory subunit 37 NW_004955555 2117438 2165515 + 102005087 AGCD01073130;AGCD01073131;GBBH01124509;XM_005412493;XM_013508759 XP_005412550;XP_013364213 MODEL 8789275 protein-coding Tnf tumor necrosis factor ENCODES a protein that exhibits cytokine activity (ortholog); histone H3K9ac reader activity (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); antiviral innate immune response (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN ceramide signaling pathway; Fc epsilon receptor mediated signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH otitis media; Streptococcal Infections; acne (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955437 117267 119899 + 102012472 AGCD01034101;GBDI01328104;XM_005389324 XP_005389381 MODEL 8953922 protein-coding Slc15a3 solute carrier family 15 member 3 ENCODES a protein that exhibits dipeptide transmembrane transporter activity (ortholog); peptidoglycan transmembrane transporter activity (ortholog); INVOLVED IN dipeptide import across plasma membrane (ortholog); peptidoglycan transport (ortholog); positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955511 5574686 5582992 - 102019192 AGCD01066571;AGCD01066572;GBDI01323373;GBDJ01315022;XM_005408288 XP_005408345 MODEL 616940645 scarna SCARNA11 Small Cajal body specific RNA 11 8794290 protein-coding Ppargc1b PPARG coactivator 1 beta ENCODES a protein that exhibits AF-2 domain binding (ortholog); nuclear estrogen receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN estrogen receptor signaling pathway (ortholog); positive regulation of cold-induced thermogenesis (ortholog); positive regulation of osteoclast differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mediator complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955415 4638057 4756885 - 102020656 AGCD01015976;AGCD01015977;AGCD01015978;AGCD01015979;AGCD01015980;GBCB01075411;XM_005380593;XM_013512327;XM_013512328 XP_005380650;XP_013367781;XP_013367782 MODEL 8774820 protein-coding LOC102025112 olfactory receptor 51T1 NW_004955414 20490013 20494165 + 102025112 AGCD01015376;XM_005380474 XP_005380531 MODEL 8905923 protein-coding Igsf8 immunoglobulin superfamily member 8 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); positive regulation of cell migration (ortholog); regulation of cell motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axon (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); membrane (ortholog) NW_004955468 11877369 11883962 - 102013814 AGCD01052139;GBDI01182195;XM_005400193 XP_005400250 MODEL 8932198 protein-coding Tbccd1 TBCC domain containing 1 INVOLVED IN maintenance of centrosome location (ortholog); maintenance of Golgi location (ortholog); regulation of cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN spindle pole centrosome (ortholog) NW_004955420 21113527 21135704 + 102005478 AGCD01021125;AGCD01021126;AGCD01021127;GBDF01077527;XM_005383276;XM_005383277;XM_005383278;XM_005383279 XP_005383333;XP_005383334;XP_005383335;XP_005383336 MODEL 8837515 ncrna LOC102012801 uncharacterized LOC102012801 NW_004955437 8031121 8040440 - 102012801 AGCD01034477;GBDF01226069;XR_261867 MODEL 8923336 protein-coding Spry1 sprouty RTK signaling antagonist 1 INVOLVED IN bud elongation involved in lung branching (ortholog); endothelial tube formation (ortholog); epithelial to mesenchymal transition involved in cardiac fibroblast development (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); genetic disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955428 17451703 17455695 - 102010288 AGCD01028042;GBCE01054093;GBDK01137505;XM_005386752 XP_005386809 MODEL 8750991 pseudo LOC102007677 40S ribosomal protein S3a pseudogene NW_004955426 13259846 13261749 + 102007677 AGCD01026360 MODEL 8866979 protein-coding Styk1 STY kinase 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 7127373 7188492 + 102004262 AGCD01013800;AGCD01013801;AGCD01013802;AGCD01013803;AGCD01013804;GBDJ01139475;XM_005378924;XM_013511636;XM_013511637;XM_013511638;XM_013511640;XM_013511641;XM_013511642;XM_013511643 XP_005378981;XP_013367090;XP_013367091;XP_013367092;XP_013367094;XP_013367095;XP_013367096;XP_013367097 MODEL 8731531 protein-coding Bin3 bridging integrator 3 INVOLVED IN intracellular protein localization (ortholog); myoblast migration involved in skeletal muscle regeneration (ortholog); regulation of lamellipodium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog) NW_004955403 46042885 46085029 - 102013997 AGCD01002849;GBDF01085029;XM_005373686 XP_005373743 MODEL 8958241 pseudo LOC102021221 F-actin-capping protein subunit beta pseudogene NW_004955465 6283370 6300243 + 102021221 AGCD01050439;AGCD01050440 MODEL 9035917 pseudo LOC102004389 atlastin-2-like NW_004955482 7328108 7330635 + 102004389 AGCD01057455;AGCD01057456 MODEL 39132374 snrna U6 U6 spliceosomal RNA 9033989 protein-coding LOC102015862 olfactory receptor 1078-like NW_004955495 8410886 8411842 + 102015862 AGCD01062205;XM_005406107 XP_005406164 MODEL 8811387 protein-coding LOC102017797 uncharacterized LOC102017797 NW_004955427 10150908 10170576 - 102017797 AGCD01027128;AGCD01027129;AGCD01027130;AGCD01027131;AGCD01027132;AGCD01027133;GBDF01207976;XM_013515052 XP_013370506 MODEL 10340091 ncrna LOC106147266 uncharacterized LOC106147266 NW_004955408 1107092 1110510 - 106147266 AGCD01007950;XR_001232073 MODEL 8872308 protein-coding LOC102018971 melanoma-associated antigen B1-like NW_004955531 753754 758259 + 102018971 AGCD01070008;AGCD01070009;GBCQ01164686;XM_005410134;XM_005410135 XP_005410191;XP_005410192 MODEL 8843675 protein-coding Wnt7a Wnt family member 7A ENCODES a protein that exhibits cytokine activity (ortholog); frizzled binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); asymmetric protein localization involved in cell fate determination (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955429 12647993 12693998 + 102004623 AGCD01028728;GBDJ01171100;XM_005386976 XP_005387033 MODEL 9053481 ncrna LOC102012424 uncharacterized LOC102012424 NW_004955415 32886303 32889353 - 102012424 AGCD01016738;GBDI01281650;XR_260333 MODEL 8796883 ncrna LOC102013960 uncharacterized LOC102013960 NW_004955431 13827196 13842143 + 102013960 AGCD01030312;GBDI01357223;XR_261470 MODEL 39132710 snrna U6 U6 spliceosomal RNA 39132987 snrna U6 U6 spliceosomal RNA 8902003 pseudo LOC102021938 casein kinase I isoform epsilon pseudogene NW_004955452 11410970 11412430 - 102021938 AGCD01044335;AGCD01044336;XM_005395310 MODEL 8962480 pseudo LOC102003672 60S ribosomal protein L17 pseudogene NW_004955424 27996316 28003860 - 102003672 AGCD01025143;AGCD01025144;XM_005385817 MODEL 8793634 protein-coding Tsc1 TSC complex subunit 1 ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN adaptive immune response (ortholog); adult locomotory behavior (ortholog); associative learning (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); Angiofibroma (ortholog); FOUND IN actin filament (ortholog); cell cortex (ortholog); cell projection (ortholog) NW_004955513 2197037 2244992 - 102030108 AGCD01066870;AGCD01066871;GBCE01045723;XM_005408396;XM_005408397;XM_005408399;XM_013506599;XM_013506600;XM_013506601;XM_013506602;XM_013506603 XP_005408453;XP_005408454;XP_005408456;XP_013362053;XP_013362054;XP_013362055;XP_013362056;XP_013362057 MODEL 9020056 protein-coding Esyt3 extended synaptotagmin 3 INVOLVED IN fibroblast migration (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955501 537195 585640 - 102016293 AGCD01064032;AGCD01064033;AGCD01064034;GBDJ01208218;GBDK01433210;XM_005406863 XP_005406920 MODEL 8966681 protein-coding Dlec1 DLEC1 cilia and flagella associated protein ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN defense response to tumor cell (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955421 4889860 4957787 + 102013511 AGCD01021704;AGCD01021705;AGCD01021706;AGCD01021707;GBDF01153178;XM_005383726 XP_005383783 MODEL 8994314 pseudo LOC102018615 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 pseudogene NW_004955423 116522 118457 + 102018615 AGCD01023410 MODEL 8800982 protein-coding Rxfp3 relaxin family peptide receptor 3 ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); INVOLVED IN phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of cytokinesis (ortholog) NW_004955426 19493990 19497074 + 102027551 AGCD01026547;XM_005386165 XP_005386222 MODEL 8894285 protein-coding Tab1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 ENCODES a protein that exhibits kinase activator activity (ortholog); MAP kinase kinase kinase activity (ortholog); mitogen-activated protein kinase p38 binding (ortholog); INVOLVED IN aorta development (ortholog); canonical NF-kappaB signal transduction (ortholog); cardiac septum development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955413 25290733 25315267 + 102029384 AGCD01014401;GBDK01062559;XM_005379290 XP_005379347 MODEL 8955692 ncrna LOC102009605 uncharacterized LOC102009605 NW_004955478 6496663 6507303 + 102009605 AGCD01055896;GBDF01194619;XR_001230836;XR_001230837;XR_001230838;XR_263699 MODEL 8741987 pseudo LOC102003333 60S ribosomal protein L27 pseudogene NW_004955413 15155101 15155528 + 102003333 AGCD01014066 MODEL 8749760 protein-coding Krt8 keratin 8 ENCODES a protein that exhibits protein-containing complex binding (ortholog); scaffold protein binding (ortholog); INVOLVED IN cell differentiation involved in embryonic placenta development (ortholog); epithelium development (ortholog); extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); adenocarcinoma (ortholog); Breast Neoplasms (ortholog); FOUND IN apicolateral plasma membrane (ortholog); cell periphery (ortholog); cell-cell junction (ortholog) NW_004955458 178954 190310 - 102012164 AGCD01047108;AGCD01047109;AGCD01047110;GBCE01007276;GBDJ01019216;XM_005397487 XP_005397544 MODEL 9012268 protein-coding Ghsr growth hormone secretagogue receptor ENCODES a protein that exhibits coreceptor activity (ortholog); G protein-coupled receptor activity (ortholog); growth hormone secretagogue receptor activity (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); adult feeding behavior (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ghrelin system pathway; ASSOCIATED WITH alcohol use disorder (ortholog); allergic disease (ortholog); astigmatism (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); membrane raft (ortholog) NW_004955420 2483173 2486414 - 102029402 AGCD01020597;XM_005383008 XP_005383065 MODEL 39133082 snrna U6 U6 spliceosomal RNA 9046492 ncrna LOC102005088 uncharacterized LOC102005088 NW_004955563 1734092 1737196 - 102005088 AGCD01074160;GBDF01006732;XR_001232369;XR_265018 MODEL 9013418 ncrna LOC102015864 uncharacterized LOC102015864 NW_004955425 13450137 13458459 + 102015864 AGCD01025536;GBDJ01355455;XR_261139 MODEL 9031098 protein-coding Slc5a2 solute carrier family 5 member 2 ENCODES a protein that exhibits alpha-glucoside transmembrane transporter activity (ortholog); D-glucose transmembrane transporter activity (ortholog); D-glucose:sodium symporter activity (ortholog); INVOLVED IN alpha-glucoside transport (ortholog); D-glucose import across plasma membrane (ortholog); D-glucose transmembrane transport (ortholog); PARTICIPATES IN sodium-glucose cotransporter mediated glucose transport pathway; ASSOCIATED WITH familial renal glucosuria (ortholog); genetic disease (ortholog); hypertension (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) NW_004955493 8322972 8329886 + 102008866 AGCD01061291;GBDI01039947;XM_005405327;XM_013504877 XP_005405384;XP_013360331 MODEL 8894317 protein-coding Lrrc28 leucine rich repeat containing 28 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955416 26668712 26786945 + 102004277 AGCD01017602;AGCD01017603;AGCD01017604;AGCD01017605;GBDF01002081;XM_005381627;XM_005381628;XM_013512542 XP_005381684;XP_005381685;XP_013367996 MODEL 8780614 protein-coding Kctd2 potassium channel tetramerization domain containing 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955553 1899533 1918534 + 102005086 AGCD01072904;AGCD01072905;GBCE01098286;GBDF01087330;XM_013508657 XP_013364111 MODEL 8799274 protein-coding Ttll8 tubulin tyrosine ligase like 8 ENCODES a protein that exhibits protein-glycine ligase activity (ortholog); protein-glycine ligase activity, initiating (ortholog); INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); microtubule cytoskeleton (ortholog) NW_004955413 33086528 33119801 - 102018912 AGCD01014656;GBDF01081579;XM_013511673 XP_013367127 MODEL 8705851 protein-coding Igsf9 immunoglobulin superfamily member 9 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); INVOLVED IN dendrite development (ortholog); homophilic cell-cell adhesion (ortholog); regulation of synapse maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955468 11722716 11741622 - 102011298 AGCD01052137;GBDF01166084;XM_005400184;XM_005400186;XM_005400187 XP_005400241;XP_005400243;XP_005400244 MODEL 39133431 snrna U4 U4 spliceosomal RNA 8939819 protein-coding Fgd3 FYVE, RhoGEF and PH domain containing 3 INVOLVED IN filopodium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955515 4967862 5025604 - 102025497 AGCD01067334;GBBH01035013;XM_013506892;XM_013506893;XM_013506894;XM_013506896;XM_013506897;XM_013506898;XM_013506899 XP_013362346;XP_013362347;XP_013362348;XP_013362350;XP_013362351;XP_013362352;XP_013362353 MODEL 8891437 protein-coding Shkbp1 SH3KBP1 binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN lysosome (ortholog) NW_004955578 716818 730593 - 102011711 AGCD01075493;GBDK01090513;XM_005414043 XP_005414100 MODEL 8794655 ncrna LOC102010368 uncharacterized LOC102010368 NW_004955417 26506352 26519514 - 102010368 AGCD01018512;AGCD01018513;GBDJ01093566;XR_001233419;XR_001233420;XR_001233421 MODEL 8750985 protein-coding Spry2 sprouty RTK signaling antagonist 2 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); molecular function inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); bud elongation involved in lung branching (ortholog); cell fate commitment (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH achalasia (ortholog); ciliopathy (ortholog); cleft lip (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoskeleton (ortholog); cytosol (ortholog) NW_004955404 27349286 27353706 + 102007497 AGCD01003924;AGCD01003925;GBBH01227874;GBDJ01272981;XM_005374123 XP_005374180 MODEL 8969526 protein-coding Dsg3 desmoglein 3 ENCODES a protein that exhibits protein dimerization activity (ortholog); INVOLVED IN actin filament organization (ortholog); adherens junction assembly (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH BLISTERING, ACANTHOLYTIC, OF ORAL AND LARYNGEAL MUCOSA (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN anchoring junction (ortholog); cell junction (ortholog); cell-cell junction (ortholog) NW_004955402 18781511 18811675 + 102017724 AGCD01000540;GBDI01022621;XM_005372742;XM_013506734 XP_005372799;XP_013362188 MODEL 8975785 protein-coding Lgi2 leucine rich repeat LGI family member 2 INVOLVED IN inhibitory synapse assembly (ortholog); ASSOCIATED WITH epilepsy (ortholog) NW_004955480 58661 89906 + 102025461 AGCD01056578;AGCD01056579;GBBH01193047;GBBH01193048;XM_005402459 XP_005402516 MODEL 39132989 snrna U6 U6 spliceosomal RNA 8862543 pseudo LOC102020109 E3 ubiquitin-protein ligase RBX1 pseudogene NW_004955415 8171865 8172300 + 102020109 AGCD01016065;XR_260275 MODEL 9064728 protein-coding CUNH2orf66 chromosome unknown C2orf66 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); urinary bladder cancer (ortholog) NW_004955403 3600567 3604378 + 102017411 AGCD01001770;GBDI01226309;XM_005373272;XM_013512112 XP_005373329;XP_013367566 MODEL 9010415 protein-coding Birc2 baculoviral IAP repeat containing 2 ENCODES a protein that exhibits FBXO family protein binding (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); necroptotic process (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN FasL mediated signaling pathway; nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); bowenoid papulosis (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955412 5658322 5685628 + 102012516 AGCD01012645;AGCD01012646;AGCD01012647;AGCD01012648;GBCB01002048;GBDI01082457;XM_013511020 XP_013366474 MODEL 39131455 protein-coding PYGO1 pygopus family PHD finger 1 8986734 protein-coding Slc15a4 solute carrier family 15 member 4 ENCODES a protein that exhibits dipeptide transmembrane transporter activity (ortholog); L-histidine transmembrane transporter activity (ortholog); peptide:proton symporter activity (ortholog); INVOLVED IN dipeptide import across plasma membrane (ortholog); histidine transport (ortholog); L-histidine transmembrane export from vacuole (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN early endosome membrane (ortholog); endolysosome membrane (ortholog); endosome membrane (ortholog) NW_004955482 2327137 2343980 + 102006458 AGCD01057244;GBBH01117824;XM_013503714 XP_013359168 MODEL 8737056 protein-coding LOC102004392 potassium voltage-gated channel subfamily F member 1 NW_004955487 5780814 5785142 + 102004392 AGCD01059346;GBDJ01337648;XM_005404421 XP_005404478 MODEL 10244350 ncrna LOC106147267 uncharacterized LOC106147267 NW_004955537 2254865 2257130 + 106147267 AGCD01070921;GBDK01389871;XR_001232076 MODEL 8843586 protein-coding Ppat phosphoribosyl pyrophosphate amidotransferase ENCODES a protein that exhibits amidophosphoribosyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); 'de novo' IMP biosynthetic process (ortholog); 'de novo' XMP biosynthetic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955447 14552846 14607416 + 102027586 AGCD01041014;AGCD01041015;AGCD01041016;GBDF01188418;XM_005392870;XM_005392871;XM_013518498;XM_013518499 XP_005392927;XP_005392928;XP_013373952;XP_013373953 MODEL 8724884 ncrna LOC102018973 uncharacterized LOC102018973 NW_004955533 929825 934774 + 102018973 AGCD01070335;GBDI01248267;XR_001232039;XR_001232040;XR_001232041 MODEL 9033806 protein-coding Tes testin LIM domain protein ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); childhood acute lymphocytic leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955432 21992708 22035441 + 102010400 AGCD01031245;AGCD01031246;GBCE01096721;XM_005388117;XM_005388118;XM_005388119 XP_005388174;XP_005388175;XP_005388176 MODEL 8928568 protein-coding Smc5 structural maintenance of chromosomes 5 ENCODES a protein that exhibits DNA secondary structure binding (ortholog); INVOLVED IN cellular senescence (ortholog); chromosome condensation (ortholog); chromosome segregation (ortholog); ASSOCIATED WITH Atelis syndrome 2 (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); chromosome, telomeric region (ortholog) NW_004955434 2742276 2848384 - 102007149 AGCD01032105;AGCD01032106;AGCD01032107;AGCD01032108;AGCD01032109;AGCD01032110;GBBH01011429;GBDJ01164340;XM_005388744;XM_013516362 XP_005388801;XP_013371816 MODEL 8701712 protein-coding LOC102012802 uncharacterized LOC102012802 NW_004955541 36527 43417 + 102012802 AGCD01071344;GBDI01026247;XM_005410957;XM_013507937;XM_013507938 XP_005411014;XP_013363391;XP_013363392 MODEL 8984404 protein-coding Wnt7b Wnt family member 7B ENCODES a protein that exhibits chemoattractant activity involved in axon guidance (ortholog); frizzled binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN anatomical structure regression (ortholog); angiogenesis (ortholog); apoptotic process involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH breast cancer (ortholog); breast fibroadenoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) NW_004955413 30146185 30185693 - 102005922 AGCD01014601;AGCD01014602;GBBH01026258;GBCE01031612;XM_013511611;XM_013511613 XP_013367065;XP_013367067 MODEL 8752923 pseudo LOC102009226 40S ribosomal protein S13 pseudogene NW_004955550 1911159 1911637 - 102009226 AGCD01072597 MODEL 8887155 pseudo LOC102013961 F-box-like/WD repeat-containing protein TBL1XR1 pseudogene NW_004955431 4870896 4884687 + 102013961 AGCD01030014 MODEL 8937498 protein-coding Grpr gastrin releasing peptide receptor ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); neuropeptide binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); learning or memory (ortholog); motor behavior (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Memory Disorders (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955519 2032500 2063292 - 102009412 AGCD01067913;AGCD01067914;XM_005409151 XP_005409208 MODEL 9002011 protein-coding LOC102022970 olfactory receptor 4S2-like NW_004955550 594005 621630 - 102022970 AGCD01072511;AGCD01072512;AGCD01072513;XM_005412135 XP_005412192 MODEL 9030055 pseudo LOC102017800 heterogeneous nuclear ribonucleoproteins A2/B1 pseudogene NW_004955428 18182006 18184385 - 102017800 AGCD01028058 MODEL 8886949 protein-coding Etaa1 ETAA1 activator of ATR kinase ENCODES a protein that exhibits protein serine/threonine kinase activator activity (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic G2/M transition checkpoint (ortholog); regulation of DNA damage checkpoint (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nuclear replication fork (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955424 17271690 17321276 - 102025480 AGCD01024759;GBDF01261344;XM_005385677;XM_005385678;XR_001234226;XR_001234227;XR_001234228;XR_001234229;XR_001234230;XR_001234231;XR_001234232;XR_001234233;XR_001234234;XR_001234235;XR_001234236;XR_001234237;XR_261075 XP_005385734;XP_005385735 MODEL 39133083 snrna U6 U6 spliceosomal RNA 8835822 ncrna LOC102025114 uncharacterized LOC102025114 NW_004955415 29659897 29684279 - 102025114 AGCD01016654;GBCE01080812;XR_001233189;XR_001233190;XR_260322 MODEL 9035646 protein-coding Spry3 sprouty RTK signaling antagonist 3 INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of MAPK cascade (ortholog); negative regulation of neuron projection arborization (ortholog); ASSOCIATED WITH Ependymomas (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955594 151117 158627 - 102022244 AGCD01076418;XM_005414640;XM_005414641 XP_005414697;XP_005414698 MODEL 8729368 protein-coding Tbcd tubulin folding cofactor D ENCODES a protein that exhibits beta-tubulin binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN cell morphogenesis involved in neuron differentiation (ortholog); mitotic cell cycle (ortholog); negative regulation of microtubule polymerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog) NW_004955506 273769 434205 - 102004838 AGCD01065218;AGCD01065219;AGCD01065220;AGCD01065221;AGCD01065222;AGCD01065223;AGCD01065224;AGCD01065225;AGCD01065226;GBCQ01158095;XM_005407182;XM_013506004 XP_005407239;XP_013361458 MODEL 39131382 protein-coding PYGO2 pygopus family PHD finger 2 9040946 ncrna LOC102007678 uncharacterized LOC102007678 NW_004955427 4628626 4654041 - 102007678 AGCD01026970;AGCD01026971;GBDF01253448;XR_261233 MODEL 8727567 protein-coding Tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); molecular adaptor activity (ortholog); zinc ion binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); defense response to bacterium (ortholog); heart development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cardiomyopathy (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955439 11826469 11903103 - 102014175 AGCD01035924;AGCD01035925;GBCB01022887;XM_005390614;XM_005390615;XM_005390616;XM_013517374;XM_013517375;XM_013517376 XP_005390671;XP_005390672;XP_005390673;XP_013372828;XP_013372829;XP_013372830 MODEL 9013849 ncrna LOC102003674 uncharacterized LOC102003674 NW_004955427 13594699 13599884 + 102003674 AGCD01027253;GBDF01143677;XR_001234373 MODEL 9002363 protein-coding Styx serine/threonine/tyrosine interacting protein ENCODES a protein that exhibits F-box domain binding (ortholog); pseudophosphatase activity (ortholog); INVOLVED IN negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process (ortholog); regulation of ERK1 and ERK2 cascade (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955409 10428556 10445384 - 102009256 AGCD01009471;GBDF01049202;GBDI01355596;XM_005376778 XP_005376835 MODEL 8905403 protein-coding Tesc tescalcin ENCODES a protein that exhibits calcium ion binding (ortholog); magnesium ion binding (ortholog); phosphatase inhibitor activity (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); male gonad development (ortholog); megakaryocyte development (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cation-transporting ATPase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955455 14053918 14092637 + 102023114 AGCD01046082;GBBH01033835;XM_005396547;XM_005396548 XP_005396604;XP_005396605 MODEL 39133432 snrna U4 U4 spliceosomal RNA 8885517 protein-coding LOC102009229 kallikrein-4-like NW_004955558 1932972 1936783 + 102009229 AGCD01073488;GBDF01079517;XM_005412753 XP_005412810 MODEL 8968888 protein-coding Rxfp4 relaxin family peptide/INSL5 receptor 4 INVOLVED IN positive regulation of feeding behavior (ortholog) NW_004955545 2143832 2145939 + 102013548 AGCD01071886;XM_005411627 XP_005411684 MODEL 8728209 protein-coding Tnfaip1 TNF alpha induced protein 1 ENCODES a protein that exhibits cyclin binding (ortholog); identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cell migration (ortholog); immune response (ortholog); negative regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); endosome (ortholog) NW_004955481 4786015 4799376 - 102008626 AGCD01056952;AGCD01056953;GBDJ01273979;XM_005402768;XM_005402769 XP_005402825;XP_005402826 MODEL 39132375 snrna U6 U6 spliceosomal RNA 8743958 protein-coding LOC102003334 uncharacterized LOC102003334 NW_004955470 2780581 2789641 + 102003334 AGCD01052682;GBDF01222195;XM_005400615;XM_005400616;XM_005400617;XM_005400618 XP_005400672;XP_005400673;XP_005400674;XP_005400675 MODEL 41410895 scarna SCARNA13 Small Cajal body specific RNA 13 8926086 protein-coding Tsc2 TSC complex subunit 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); GTPase activator activity (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN anoikis (ortholog); cellular response to insulin stimulus (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN mitogen activated protein kinase signaling pathway; mTOR signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Acute Hepatitis (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN caveola (ortholog); cell projection (ortholog); cytoplasm (ortholog) NW_004955442 15178356 15216978 - 102006398 AGCD01037860;GBDI01113122;XM_005391468;XM_005391470;XM_013517657;XM_013517658;XM_013517660;XM_013517661;XM_013517662 XP_005391525;XP_005391527;XP_013373111;XP_013373112;XP_013373114;XP_013373115;XP_013373116 MODEL 8925093 ncrna LOC102020113 uncharacterized LOC102020113 NW_004955416 21270399 21281753 + 102020113 AGCD01017501;AGCD01017502;GBCB01080657;XR_001233350;XR_260407 MODEL 8919529 protein-coding Krt80 keratin 80 ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); desmosome (ortholog); intermediate filament (ortholog) NW_004955547 2511235 2531631 - 102005752 AGCD01072283;GBBH01140251;XM_005411932;XM_013508497 XP_005411989;XP_013363951 MODEL 9043445 protein-coding CUNH2orf68 chromosome unknown C2orf68 homolog NW_004955424 1895757 1897797 + 102026763 AGCD01024249;GBDF01155585;XM_005385419 XP_005385476 MODEL 9052836 protein-coding LOC102012426 BBSome-interacting protein 1-like NW_004955478 7258776 7259420 - 102012426 AGCD01055956;XM_005402160 XP_005402217 MODEL 39133084 snrna U6 U6 spliceosomal RNA 9049614 protein-coding Kctd20 potassium channel tetramerization domain containing 20 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of phosphorylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955437 4127823 4141108 + 102010519 AGCD01034362;GBCQ01096384;XM_013516917 XP_013372371 MODEL 9033762 protein-coding Lrrc29 Leucine-rich repeat-containing protein 29 ASSOCIATED WITH pneumoconiosis (ortholog) NW_004955484 9399034 9414493 + 102009060 AGCD01058415;GBDF01053368;XM_005403671;XM_005403674;XM_013503906;XM_013503908;XM_013503909;XM_013503910;XM_013503911;XM_013503912;XM_013503913 XP_005403728;XP_005403731;XP_013359360;XP_013359362;XP_013359363;XP_013359364;XP_013359365;XP_013359366;XP_013359367 MODEL 8914127 protein-coding Ttll9 tubulin tyrosine ligase like 9 ENCODES a protein that exhibits tubulin-glutamic acid ligase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); high grade glioma (ortholog); FOUND IN ciliary basal body (ortholog) NW_004955422 29061323 29105196 - 102012772 AGCD01023378;GBCE01064654;XM_005384882;XM_005384883 XP_005384939;XP_005384940 MODEL 8780512 protein-coding Igsf9b immunoglobulin superfamily member 9B ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN homophilic cell-cell adhesion (ortholog); positive regulation of inhibitory postsynaptic potential (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); inhibitory synapse (ortholog) NW_004955412 34712556 34828013 - 102027734 AGCD01013391;AGCD01013392;GBBH01149995;XM_005378583;XM_013511161;XM_013511162 XP_005378640;XP_013366615;XP_013366616 MODEL 8871029 protein-coding Fgd4 FYVE, RhoGEF and PH domain containing 4 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); INVOLVED IN lamellipodium assembly (ortholog); microspike assembly (ortholog); positive regulation of JNK cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); FOUND IN filopodium (ortholog); lamellipodium (ortholog) NW_004955505 3108131 3314040 - 102009403 AGCD01065015;AGCD01065016;AGCD01065017;AGCD01065018;AGCD01065019;AGCD01065020;GBBH01177094;GBCE01037509;XM_013505926 XP_013361380 MODEL 9068082 protein-coding LOC102010369 galectin-9-like NW_004955481 5706510 5744393 - 102010369 AGCD01057000;AGCD01057001;AGCD01057002;GBCE01150879;XM_013503348;XM_013503349 XP_013358802;XP_013358803 MODEL 9059939 protein-coding Smc6 structural maintenance of chromosomes 6 ENCODES a protein that exhibits DNA secondary structure binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular senescence (ortholog); DNA damage response (ortholog); host-mediated suppression of viral genome replication (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); chromosome, telomeric region (ortholog) NW_004955469 456023 552794 - 102006648 AGCD01052223;AGCD01052224;AGCD01052225;AGCD01052226;AGCD01052227;GBBH01150724;GBDK01281602;XM_013522645 XP_013378099 MODEL 8904022 protein-coding Shld1 shieldin complex subunit 1 INVOLVED IN negative regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of double-strand break repair via nonhomologous end joining (ortholog); positive regulation of isotype switching (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromosome (ortholog); site of double-strand break (ortholog) NW_004955415 16180074 16282937 + 102013928 AGCD01016375;AGCD01016376;GBDJ01222624;XM_005380839;XM_005380840;XM_005380841;XM_005380842 XP_005380896;XP_005380897;XP_005380898;XP_005380899 MODEL 8787894 pseudo LOC102013965 prostaglandin reductase 1 pseudogene NW_004955530 3388161 3388865 - 102013965 AGCD01069951 MODEL 8993927 protein-coding Gid4 GID complex subunit 4 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955478 11223083 11242986 - 102004384 AGCD01056164;GBCQ01067338;GBDF01004608;XM_013503218 XP_013358672 MODEL 39132991 snrna U6 U6 spliceosomal RNA 8790776 protein-coding Grsf1 G-rich RNA sequence binding factor 1 ENCODES a protein that exhibits mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); morphogenesis of embryonic epithelium (ortholog); positive regulation of mitochondrial RNA catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) NW_004955447 2181841 2194650 + 102022138 AGCD01040535;GBBH01060226;GBCB01002036;XM_005392775 XP_005392832 MODEL 8899837 pseudo LOC102005092 golgin subfamily A member 5 pseudogene NW_004955594 631055 633335 - 102005092 AGCD01076436 MODEL 9012523 protein-coding Birc3 baculoviral IAP repeat containing 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); transferase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); necroptotic process (ortholog); negative regulation of necroptotic process (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); bowenoid papulosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955412 5624865 5643520 + 102012174 AGCD01012644;GBDJ01123917;XM_005377975;XM_013511018;XM_013511019 XP_005378032;XP_013366472;XP_013366473 MODEL 8987484 protein-coding Slc15a5 solute carrier family 15 member 5 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955413 12832193 12924836 - 102007323 AGCD01014001;AGCD01014002;AGCD01014003;AGCD01014004;XM_005379024 XP_005379081 MODEL 39131340 protein-coding NPS neuropeptide S 8982705 protein-coding Etf1 eukaryotic translation termination factor 1 ENCODES a protein that exhibits peptidyl-tRNA hydrolase activity (ortholog); sequence-specific mRNA binding (ortholog); translation release factor activity (ortholog); INVOLVED IN regulation of translational termination (ortholog); translational termination (ortholog); PARTICIPATES IN translation termination pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); nucleus (ortholog) NW_004955418 1943233 1974241 + 102025793 AGCD01018735;GBDF01005274;XM_005382097;XM_005382099;XM_013512964 XP_005382154;XP_005382156;XP_013368418 MODEL 8858240 protein-coding Slc5a3 solute carrier family 5 member 3 ENCODES a protein that exhibits D-glucose:sodium symporter activity (ortholog); fucose transmembrane transporter activity (ortholog); myo-inositol:sodium symporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); fucose transmembrane transport (ortholog); inositol metabolic process (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); coronary artery disease (ortholog); renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955407 33460238 33511889 + 102025979 AGCD01007701;GBDF01234314;XM_005375699 XP_005375756 MODEL 8798815 ncrna LOC102021224 uncharacterized LOC102021224 NW_004955412 26549172 26550474 - 102021224 AGCD01013194;GBDF01009694;XR_260026 MODEL 8808338 protein-coding Garin2 golgi associated RAB2 interactor family member 2 INVOLVED IN cell morphogenesis (ortholog); flagellated sperm motility (ortholog); penetration of zona pellucida (ortholog); FOUND IN sperm head (ortholog); sperm midpiece (ortholog) NW_004955466 2968538 3009551 - 102018171 AGCD01050776;AGCD01050777;AGCD01050778;AGCD01050779;AGCD01050780;GBDF01000605;XM_005399090;XM_005399091;XM_013521934;XM_013521935;XM_013521936;XM_013521937;XM_013521938;XM_013521939;XM_013521940;XM_013521941 XP_005399147;XP_005399148;XP_013377388;XP_013377389;XP_013377390;XP_013377391;XP_013377392;XP_013377393;XP_013377394;XP_013377395 MODEL 8744440 pseudo LOC102018617 phylloquinone omega-hydroxylase CYP4F2-like NW_004955495 7595180 7606574 - 102018617 AGCD01062154 MODEL 8905714 protein-coding Wnt8a Wnt family member 8A ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell morphogenesis (ortholog); endoderm development (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH atrial fibrillation (ortholog); congenital fibrosis of the extraocular muscles (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN extracellular region (ortholog) NW_004955418 2332636 2338099 - 102007429 AGCD01018762;XM_005382133 XP_005382190 MODEL 39133085 snrna U6 U6 spliceosomal RNA 8837479 ncrna LOC102009608 uncharacterized LOC102009608 NW_004955481 940584 941784 - 102009608 AGCD01056818;GBDF01049337;XR_263757 MODEL 8785570 pseudo LOC102003677 protein phosphatase 1 regulatory subunit 42-like NW_004955511 3024029 3025033 - 102003677 AGCD01066439 MODEL 8921997 protein-coding Dsg4 desmoglein 4 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell-cell adhesion (ortholog); hair follicle development (ortholog); ASSOCIATED WITH alopecia (ortholog); genetic disease (ortholog); hypotrichosis (ortholog); FOUND IN desmosome (ortholog); plasma membrane (ortholog) NW_004955402 18724959 18754232 + 102024074 AGCD01000537;AGCD01000538;XM_005373160 XP_005373217 MODEL 8878293 ncrna LOC102022971 uncharacterized LOC102022971 NW_004955442 13794445 13816448 - 102022971 AGCD01037788;AGCD01037789;AGCD01037790;AGCD01037791;AGCD01037792;GBDF01042887;XR_262138 MODEL 8796303 pseudo LOC102015866 RNA 3'-terminal phosphate cyclase-like protein pseudogene NW_004955502 7724548 7725670 - 102015866 AGCD01064460 MODEL 8828732 pseudo LOC102009232 phosphorylated adapter RNA export protein pseudogene NW_004955444 566028 567654 + 102009232 AGCD01038678 MODEL 10063767 ncrna LOC106147268 uncharacterized LOC106147268 NW_004955537 1799590 1801637 - 106147268 AGCD01070905;GBDJ01380106;XR_001232082 MODEL 8720145 protein-coding LOC102021945 granzyme H-like NW_004955409 35505067 35515345 + 102021945 AGCD01010424;AGCD01010425;GBDK01074391;XM_005376986;XM_005376989;XM_005376990;XM_013510455 XP_005377043;XP_005377046;XP_005377047;XP_013365909 MODEL 39132377 snrna U6 U6 spliceosomal RNA 9012376 pseudo LOC102004394 60S ribosomal protein L36 pseudogene NW_004955491 6461282 6485923 + 102004394 AGCD01060532;AGCD01060533 MODEL 8994372 ncrna LOC102018978 uncharacterized LOC102018978 NW_004955538 50810 55747 + 102018978 AGCD01070984;GBDF01116779;XR_264782 MODEL 8843523 protein-coding LOC102025115 heat shock factor protein 3-like NW_004955475 5498275 5555299 - 102025115 AGCD01054919;AGCD01054920;AGCD01054921;GBDF01165225;XM_013502808 XP_013358262 MODEL 730469061 misc_rna DLEU1_1 Deleted in lymphocytic leukemia 1 conserved region 1 8970252 ncrna LOC102012807 uncharacterized LOC102012807 NW_004955442 3947192 3955740 - 102012807 AGCD01037517;GBBH01153642;XR_262112 MODEL 8961556 protein-coding Tbce tubulin folding cofactor E INVOLVED IN adult locomotory behavior (ortholog); axonogenesis (ortholog); developmental growth (ortholog); ASSOCIATED WITH autoimmune hemolytic anemia (ortholog); bacterial infectious disease (ortholog); bronchiectasis (ortholog) NW_004955492 4502705 4573126 - 102023159 AGCD01060723;AGCD01060724;AGCD01060725;GBDJ01272400;XM_005404946;XM_005404947;XM_013504676;XM_013504677;XM_013504678 XP_005405003;XP_005405004;XP_013360130;XP_013360131;XP_013360132 MODEL 8982933 protein-coding LOC102007680 olfactory receptor 13A1-like NW_004955507 6487198 6488139 - 102007680 AGCD01065718;XM_005407725 XP_005407782 MODEL 8821751 protein-coding Lgi3 leucine rich repeat LGI family member 3 INVOLVED IN regulation of exocytosis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); INTELLECTUAL DEVELOPMENTAL DISORDER WITH MUSCLE TONE ABNORMALITIES AND DISTAL SKELETAL DEFECTS (ortholog); FOUND IN extracellular region (ortholog); juxtaparanode region of axon (ortholog); synaptic vesicle (ortholog) NW_004955403 45634237 45644172 - 102004228 AGCD01002824;GBDK01189875;XM_005373650;XM_013513776 XP_005373707;XP_013369230 MODEL 8735301 protein-coding Npsr1 neuropeptide S receptor 1 ENCODES a protein that exhibits neuropeptide receptor activity (ortholog); INVOLVED IN eating behavior (ortholog); negative regulation of defecation (ortholog); negative regulation of eating behavior (ortholog); ASSOCIATED WITH Alcoholic Intoxication (ortholog); allergic asthma (ortholog); allergic contact dermatitis (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955560 1069651 1243111 - 102023206 AGCD01073746;AGCD01073747;AGCD01073748;AGCD01073749;AGCD01073750;XM_005412989 XP_005413046 MODEL 9047879 protein-coding Ttn titin ENCODES a protein that exhibits actin filament binding (ortholog); actinin binding (ortholog); ankyrin binding (ortholog); INVOLVED IN adult heart development (ortholog); cardiac muscle cell development (ortholog); cardiac muscle contraction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amblyopia (ortholog); Anisocoria (ortholog); FOUND IN A band (ortholog); condensed nuclear chromosome (ortholog); I band (ortholog) NW_004955403 18057344 18328389 + 102024966 AGCD01002094;AGCD01002095;AGCD01002096;GBCB01022163;JN632946;XM_005373371;XM_005373372;XM_013512603;XM_013512608 AEO94691;XP_005373428;XP_005373429;XP_013368057;XP_013368062 MODEL 39132711 snrna U6 U6 spliceosomal RNA 8835659 pseudo LOC102017802 transcription factor SPT20 homolog pseudogene NW_004955509 4675525 4678213 - 102017802 AGCD01066084;XM_005407843 MODEL 8764998 protein-coding Tesk1 testis associated actin remodelling kinase 1 ENCODES a protein that exhibits protein kinase activity (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN establishment of vesicle localization (ortholog); negative regulation of cilium assembly (ortholog); nuclear-transcribed mRNA catabolic process, no-go decay (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); stomach cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955472 670847 676060 - 102011651 AGCD01053346;AGCD01053347;GBBH01115775;GBCB01003173;XM_005401181 XP_005401238 MODEL 8749377 protein-coding Ihh Indian hedgehog signaling molecule ENCODES a protein that exhibits calcium ion binding (ortholog); morphogen activity (ortholog); patched binding (ortholog); INVOLVED IN bone resorption (ortholog); branching involved in blood vessel morphogenesis (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acrocapitofemoral dysplasia (ortholog); acromesomelic dysplasia, Maroteaux type (ortholog); annular pancreas (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955453 14376665 14382536 + 102024084 AGCD01044864;GBCQ01087658;XM_005395596 XP_005395653 MODEL 8751388 protein-coding Rxra retinoid X receptor alpha ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA binding domain binding (ortholog); INVOLVED IN axon regeneration (ortholog); camera-type eye development (ortholog); cardiac muscle cell proliferation (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcoholic cardiomyopathy (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN axon (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955513 3313544 3386544 + 102024492 AGCD01066901;GBDJ01079793;XM_005408467;XM_013506714 XP_005408524;XP_013362168 MODEL 8771339 protein-coding Tnfaip2 TNF alpha induced protein 2 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955538 2159773 2173312 + 102005967 AGCD01071102;AGCD01071103;AGCD01071104;AGCD01071105;GBDF01047699;XM_005410764;XM_005410765 XP_005410821;XP_005410822 MODEL 730469082 scarna SCARNA13 Small Cajal body specific RNA 13 8897227 pseudo LOC102013970 dnaJ homolog subfamily A member 2 pseudogene NW_004955438 16349528 16350769 + 102013970 AGCD01035405 MODEL 39132992 snrna U6 U6 spliceosomal RNA 9056708 protein-coding LOC102020117 uncharacterized LOC102020117 NW_004955417 27294545 27298443 + 102020117 AGCD01018545;GBDF01044231;XM_005381993 XP_005382050 MODEL 8750629 pseudo LOC102015867 la-related protein 4 pseudogene NW_004955503 7794873 7799158 - 102015867 AGCD01064799 MODEL 8831533 protein-coding Gid8 GID complex subunit 8 homolog ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955528 1146313 1153093 - 102020705 AGCD01069552;GBDF01051218;XM_005410002;XM_005410003;XM_013507475 XP_005410059;XP_005410060;XP_013362929 MODEL 8777023 protein-coding Tsc22d1 TSC22 domain family member 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of hematopoietic stem cell proliferation (ortholog); negative regulation of programmed cell death (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955518 2322566 2451519 - 102010937 AGCD01067775;AGCD01067776;AGCD01067777;AGCD01067778;GBDF01010659;GBDF01010660;XM_005409075 XP_005409132 MODEL 8934707 protein-coding Shld2 shieldin complex subunit 2 INVOLVED IN negative regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of double-strand break repair via nonhomologous end joining (ortholog); positive regulation of isotype switching (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955510 6021477 6114745 + 102013637 AGCD01066299;AGCD01066300;AGCD01066301;GBDF01147026;XM_005407911;XM_005407912;XM_005407913;XM_013506312;XR_001231666 XP_005407968;XP_005407969;XP_005407970;XP_013361766 MODEL 8734127 protein-coding Krt82 keratin 82 ENCODES a protein that exhibits structural molecule activity (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); keratin filament (ortholog) NW_004955547 2744554 2755794 - 102009109 AGCD01072294;GBDJ01171921;XM_005411941 XP_005411998 MODEL 8710547 ncrna LOC102012427 uncharacterized LOC102012427 NW_004955479 4854411 4862694 - 102012427 AGCD01056335;AGCD01056336;GBDF01305284;XR_001230876 MODEL 9005781 protein-coding CUNH2orf69 chromosome unknown C2orf69 homolog INVOLVED IN oxidative phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); combined oxidative phosphorylation deficiency 53 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955403 1349489 1352541 - 102022772 AGCD01001717;GBCB01073853;XM_013511947 XP_013367401 MODEL 9028100 pseudo LOC102004399 suppressor of cytokine signaling 5-like NW_004955495 3002495 3005343 + 102004399 AGCD01061814;AGCD01061815 MODEL 8766851 protein-coding Iho1 interactor of HORMAD1 1 INVOLVED IN homologous chromosome pairing at meiosis (ortholog); meiotic DNA double-strand break formation (ortholog); oogenesis (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN chromosome (ortholog); condensed nuclear chromosome (ortholog) NW_004955532 1198316 1226875 + 102007590 AGCD01070171;AGCD01070172;AGCD01070173;GBDF01126604;GBDF01126605;XM_013507565 XP_013363019 MODEL 8950406 protein-coding Lrrc3 leucine rich repeat containing 3 ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955407 41053671 41056103 - 102025324 AGCD01007854;GBDF01287458;XM_005375859 XP_005375916 MODEL 8872734 protein-coding Kctd21 potassium channel tetramerization domain containing 21 ENCODES a protein that exhibits cullin family protein binding (ortholog); histone deacetylase binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of smoothened signaling pathway (ortholog); ubiquitin-dependent protein catabolic process (ortholog) NW_004955414 13779193 13798349 + 102005027 AGCD01015119;GBDF01181327;XM_005379818;XM_005379819;XM_013512063 XP_005379875;XP_005379876;XP_013367517 MODEL 8752871 protein-coding Styxl1 serine/threonine/tyrosine interacting like 1 ENCODES a protein that exhibits phosphatase inhibitor activity (ortholog); protein phosphatase binding (ortholog); pseudophosphatase activity (ortholog); INVOLVED IN negative regulation of stress granule assembly (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); positive regulation of neuron projection development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955456 14755516 14819326 - 102007736 AGCD01046650;AGCD01046651;AGCD01046652;AGCD01046653;AGCD01046654;GBBH01140887;XM_005396806;XM_005396807;XM_005396808;XM_005396809 XP_005396863;XP_005396864;XP_005396865;XP_005396866 MODEL 8871221 pseudo LOC102010370 tax1-binding protein 1 homolog NW_004955418 30088883 30095400 + 102010370 AGCD01019503 MODEL 8755491 protein-coding Fgd5 FYVE, RhoGEF and PH domain containing 5 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955429 17297123 17367365 + 102008443 AGCD01028850;AGCD01028851;AGCD01028852;AGCD01028853;GBDK01396571;XM_013515358 XP_013370812 MODEL 8725356 protein-coding LOC102009610 dnaJ homolog subfamily C member 25 NW_004955419 15664786 15684889 - 102009610 AGCD01020086;AGCD01020087;GBBH01057437;GBDF01120670;XM_013513302 XP_013368756 MODEL 8908732 protein-coding Tab3 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); molecular adaptor activity (ortholog); zinc ion binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); defense response to bacterium (ortholog); non-canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); serine/threonine protein kinase complex (ortholog) NW_004955535 3547556 3612705 + 102029792 AGCD01070703;GBCE01186737;XM_005410491;XM_005410492;XM_005410493;XM_005410494;XM_005410496;XM_013507711;XM_013507712;XM_013507713;XM_013507714 XP_005410548;XP_005410549;XP_005410550;XP_005410551;XP_005410553;XP_013363165;XP_013363166;XP_013363167;XP_013363168 MODEL 8725170 protein-coding Tesk2 testis associated actin remodelling kinase 2 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); focal adhesion assembly (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955464 12789493 12924077 + 102003634 AGCD01050228;AGCD01050229;AGCD01050230;AGCD01050231;AGCD01050232;AGCD01050233;AGCD01050234;AGCD01050235;AGCD01050236;AGCD01050237;AGCD01050238;AGCD01050239;AGCD01050240;GBCQ01123838;GBDF01044666;XM_005398714 XP_005398771 MODEL 39133433 snrna U4 U4 spliceosomal RNA 8919921 pseudo LOC102021225 ubiquitin domain-containing protein UBFD1 pseudogene NW_004955466 9782657 9783494 - 102021225 AGCD01051055 MODEL 8707244 protein-coding Gigyf1 GRB10 interacting GYF protein 1 INVOLVED IN insulin-like growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955573 228926 240425 + 102014624 AGCD01074969;GBDF01192387;XM_005413696;XM_005413697;XM_005413698 XP_005413753;XP_005413754;XP_005413755 MODEL 8954698 ncrna LOC102018618 uncharacterized LOC102018618 NW_004955496 6005138 6016243 + 102018618 AGCD01062360;GBDF01112432;XR_001231412;XR_001231413;XR_001231414;XR_001231415;XR_001231416;XR_001231417;XR_001231418;XR_001231419;XR_001231420;XR_001231421;XR_264181 MODEL 8961424 protein-coding Etfa electron transfer flavoprotein subunit alpha ENCODES a protein that exhibits electron transfer activity (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); respiratory electron transport chain (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); genetic disease (ortholog); glutaric acidemia type 3 (ortholog); FOUND IN electron transfer flavoprotein complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955450 1392526 1451591 - 102017080 AGCD01042364;GBDF01121130;XM_005393471 XP_005393528 MODEL 39133087 snrna U6 U6 spliceosomal RNA 8741504 protein-coding Wnt8b Wnt family member 8B ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); negative regulation of gene expression (ortholog); positive regulation of gene expression (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Hirschsprung's disease (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955485 9658432 9679371 - 102010268 AGCD01058777;AGCD01058778;AGCD01058779;GBDI01289442;XM_005403912 XP_005403969 MODEL 9026840 protein-coding LOC102007682 olfactory receptor 5M3 NW_004955511 1640219 1641157 - 102007682 AGCD01066377;XM_005407968 XP_005408025 MODEL 8899186 protein-coding Tbcel tubulin folding cofactor E like NW_004955412 21969521 22044348 + 102013487 AGCD01013027;AGCD01013028;AGCD01013029;AGCD01013030;AGCD01013031;GBDI01008723;XM_005378356;XM_005378357 XP_005378413;XP_005378414 MODEL 8794520 protein-coding LOC102003335 olfactory receptor 2S2-like NW_004955472 333588 338863 + 102003335 AGCD01053329;GBDK01098752;XM_005400985;XM_013522931 XP_005401042;XP_013378385 MODEL 8866975 pseudo LOC102003679 glutamine synthetase pseudogene NW_004955431 4833847 4835235 + 102003679 AGCD01030014 MODEL 8720435 ncrna LOC102010374 uncharacterized LOC102010374 NW_004955487 1473174 1486730 + 102010374 AGCD01059246;GBDF01209774;XR_263982 MODEL 8764493 ncrna LOC102017803 uncharacterized LOC102017803 NW_004955510 6353074 6359985 - 102017803 AGCD01066305;GBCQ01116243;XR_264413 MODEL 10223544 ncrna LOC106147269 uncharacterized LOC106147269 NW_004955408 28942489 28944582 + 106147269 AGCD01008734;GBDF01266501;XR_001232083 MODEL 39131482 protein-coding BIRC5 baculoviral IAP repeat containing 5 8974223 protein-coding Tnfaip3 TNF alpha induced protein 3 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); identical protein binding (ortholog); K63-linked deubiquitinase activity (ortholog); INVOLVED IN B-1 B cell homeostasis (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia (ortholog); Arthralgia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955436 21566591 21581551 - 102018764 AGCD01034056;GBBH01102942;XM_005389278;XM_013516683;XM_013516684 XP_005389335;XP_013372137;XP_013372138 MODEL 8813158 protein-coding Pym1 PYM1 exon junction complex associated factor ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN exon-exon junction complex disassembly (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); positive regulation of translation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); exon-exon junction complex (ortholog) NW_004955458 3499217 3515108 - 102024190 AGCD01047310;AGCD01047311;AGCD01047312;AGCD01047313;AGCD01047314;GBBH01187590;GBDI01138449;XM_005397268 XP_005397325 MODEL 8882072 protein-coding Grtp1 growth hormone regulated TBC protein 1 ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955404 532866 555366 + 102013684 AGCD01003203;GBCB01109383;GBCE01117673;XM_005374221 XP_005374278 MODEL 8707178 protein-coding Slc16a1 solute carrier family 16 member 1 ENCODES a protein that exhibits carboxylic acid transmembrane transporter activity (ortholog); identical protein binding (ortholog); lactate transmembrane transporter activity (ortholog); INVOLVED IN behavioral response to nutrient (ortholog); carboxylic acid transmembrane transport (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955435 16334382 16361737 - 102007930 AGCD01033319;GBDF01006604;XM_005388972;XM_005388973;XM_005388975 XP_005389029;XP_005389030;XP_005389032 MODEL 39132995 snrna U6 U6 spliceosomal RNA 8845785 pseudo LOC102013971 nuclear receptor-binding factor 2 pseudogene NW_004955547 1394680 1395701 - 102013971 AGCD01072221 MODEL 8971914 pseudo LOC102018982 probable ribonuclease ZC3H12C pseudogene NW_004955543 2792081 2793759 - 102018982 AGCD01071662 MODEL 8706237 protein-coding Tsc22d2 TSC22 domain family member 2 INVOLVED IN negative regulation of cell cycle (ortholog); response to osmotic stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955448 1639463 1678279 + 102024397 AGCD01041265;GBCE01089585;GBDI01261302;XM_013518634 XP_013374088 MODEL 8920463 protein-coding LOC102013978 kallikrein-4-like NW_004955559 91484 103442 + 102013978 AGCD01073544;XM_013508940 XP_013364394 MODEL 8812809 protein-coding Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN dosage compensation by inactivation of X chromosome (ortholog); inactivation of paternal X chromosome by genomic imprinting (ortholog); negative regulation of double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Anosmia (ortholog); Arhinia, Choanal Atresia, and Microphthalmia (ortholog); FOUND IN Barr body (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955402 7544265 7661191 - 102016334 AGCD01000178;AGCD01000179;AGCD01000180;GBBH01005054;XM_005373146 XP_005373203 MODEL 8958786 protein-coding Dsn1 DSN1 component of MIS12 kinetochore complex INVOLVED IN skeletal muscle satellite cell proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN fibrillar center (ortholog); kinetochore (ortholog); MIS12/MIND type complex (ortholog) NW_004955422 24876340 24896435 + 102021359 AGCD01023238;GBDF01052835;XM_005384734;XM_005384736;XM_013514023 XP_005384791;XP_005384793;XP_013369477 MODEL 9058895 protein-coding Ttpa alpha tocopherol transfer protein ENCODES a protein that exhibits lipid transfer activity (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN embryonic placenta development (ortholog); intermembrane lipid transfer (ortholog); intracellular pH reduction (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); Animal Disease Models (ortholog); Ataxia (ortholog); FOUND IN late endosome (ortholog) NW_004955444 15877972 15891949 + 102024725 AGCD01039158;GBCQ01154710;XM_005392171 XP_005392228 MODEL 8950715 protein-coding LOC102009234 prolactin-like NW_004955576 435369 491017 + 102009234 AGCD01075276;AGCD01075277;AGCD01075278;AGCD01075279;AGCD01075280;AGCD01075281;AGCD01075282;AGCD01075283;XM_005413946 XP_005414003 MODEL 39132712 snrna U6 U6 spliceosomal RNA 9031653 protein-coding LOC102005097 beta-defensin 8-like NW_004955403 53669665 53672863 + 102005097 AGCD01003067;GBDK01012916;XM_005373835 XP_005373892 MODEL 8862020 protein-coding Fgd6 FYVE, RhoGEF and PH domain containing 6 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955405 31700706 31801992 - 102004554 AGCD01005303;AGCD01005304;AGCD01005305;GBDK01361830;XM_005374483;XM_013518446;XR_001235695 XP_005374540;XP_013373900 MODEL 8882384 protein-coding Rxrb retinoid X receptor beta ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cardiac muscle cell proliferation (ortholog); cellular response to retinoic acid (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955437 1767833 1774401 - 102028128 AGCD01034233;GBCE01004573;XM_005389474;XM_005389475;XM_005389477 XP_005389531;XP_005389532;XP_005389534 MODEL 730469566 misc_rna DLEU2_1 Deleted in lymphocytic leukemia 2 conserved region 1 8849101 protein-coding LOC102015868 leukocyte surface antigen CD47-like NW_004955427 9219807 9252882 + 102015868 AGCD01027095;GBDF01156224;XM_005386355;XM_005386356;XM_005386357;XM_005386358;XR_261250 XP_005386412;XP_005386413;XP_005386414;XP_005386415 MODEL 8721119 ncrna LOC102012428 uncharacterized LOC102012428 NW_004955417 7483800 7490830 + 102012428 AGCD01018005;AGCD01018006;GBDF01137161;XR_260463 MODEL 8924514 protein-coding Grwd1 glutamate rich WD repeat containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA replication origin binding (ortholog); histone binding (ortholog); INVOLVED IN DNA replication (ortholog); nucleosome assembly (ortholog); nucleosome disassembly (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); congenital diarrhea (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955559 2033743 2039493 - 102010741 AGCD01073687;GBDJ01072112;XM_005412954 XP_005413011 MODEL 8839242 protein-coding CUNH2orf76 chromosome unknown C2orf76 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955459 10347766 10406189 + 102022890 AGCD01048186;AGCD01048187;AGCD01048188;GBBH01102075;GBDI01291657;XM_013521083;XM_013521084 XP_013376537;XP_013376538 MODEL 8821764 ncrna LOC102004400 uncharacterized LOC102004400 NW_004955497 160123 162418 + 102004400 AGCD01062402;GBDF01039971;XR_264186 MODEL 8725206 protein-coding Lrrc30 leucine rich repeat containing 30 NW_004955402 4174990 4178170 - 102004214 AGCD01000113;GBCB01044200;XM_005372621 XP_005372678 MODEL 8741262 protein-coding Styxl2 serine/threonine/tyrosine interacting like 2 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog) NW_004955462 9792135 9836927 - 102026299 AGCD01049342;AGCD01049343;AGCD01049344;GBCB01000013;XM_005398234 XP_005398291 MODEL 8991873 protein-coding Tac1 tachykinin precursor 1 ENCODES a protein that exhibits neuromedin K receptor binding (ortholog); neuropeptide activity (ortholog); neuropeptide hormone activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); associative learning (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); allergic disease (ortholog); amnestic disorder (ortholog); FOUND IN axon (ortholog); extracellular region (ortholog); neuronal cell body (ortholog) NW_004955432 13991647 13999665 + 102022114 AGCD01031034;GBDI01209813;XM_005388077;XM_005388078;XM_005388079;XM_005388080 XP_005388134;XP_005388135;XP_005388136;XP_005388137 MODEL 39133434 snrna U4 U4 spliceosomal RNA 8944614 protein-coding Gigyf2 GRB10 interacting GYF protein 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); proline-rich region binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); feeding behavior (ortholog); homeostasis of number of cells within a tissue (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955453 3201593 3301541 - 102013580 AGCD01044654;GBCB01041020;XM_013519902 XP_013375356 MODEL 8825794 protein-coding Lgi4 leucine rich repeat LGI family member 4 INVOLVED IN adult locomotory behavior (ortholog); glial cell development (ortholog); glial cell proliferation (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); arthrogryposis multiplex congenita-1 (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955468 4441808 4456884 - 102012625 AGCD01051910;GBDF01017792;XM_013522439;XM_013522440;XR_001236912 XP_013377893;XP_013377894 MODEL 8952481 protein-coding Nptn neuroplastin ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); transmembrane transporter binding (ortholog); type 1 fibroblast growth factor receptor binding (ortholog); INVOLVED IN excitatory synapse assembly (ortholog); homophilic cell-cell adhesion (ortholog); intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH blindness (ortholog); Dwarfism (ortholog); esophageal cancer (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); GABA-ergic synapse (ortholog) NW_004955450 3938403 4002694 + 102024408 AGCD01042452;AGCD01042453;GBDF01119295;XM_005393595;XM_005393596;XM_005393597 XP_005393652;XP_005393653;XP_005393654 MODEL 39133088 snrna U6 U6 spliceosomal RNA 8941072 ncrna LOC102021946 uncharacterized LOC102021946 NW_004955461 13349769 13385164 - 102021946 AGCD01049036;AGCD01049037;GBDF01261825;XR_263085 MODEL 8912711 protein-coding Tbck TBC1 domain containing kinase INVOLVED IN actin cytoskeleton organization (ortholog); cell population proliferation (ortholog); regulation of TOR signaling (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); blindness (ortholog); FOUND IN cytoplasm (ortholog); midbody (ortholog); mitotic spindle (ortholog) NW_004955496 3108113 3288141 + 102007673 AGCD01062281;AGCD01062282;AGCD01062283;AGCD01062284;GBBH01137489;XM_005406217;XM_005406218;XM_013505410;XM_013505411 XP_005406274;XP_005406275;XP_013360864;XP_013360865 MODEL 39132378 snrna U6 U6 spliceosomal RNA 8833242 protein-coding Dsp desmoplakin ENCODES a protein that exhibits protein kinase C binding (ortholog); scaffold protein binding (ortholog); INVOLVED IN adherens junction organization (ortholog); bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH alopecia (ortholog); anhidrosis (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); basolateral plasma membrane (ortholog); cell junction (ortholog) NW_004955465 6356970 6391206 - 102021539 AGCD01050441;GBBH01088064;GBDI01068103;XM_013521834 XP_013377288 MODEL 9032996 pseudo LOC102010378 probable ATP-dependent RNA helicase DDX41 pseudogene NW_004955422 11267452 11268307 - 102010378 AGCD01022753 MODEL 10067478 ncrna LOC106147271 uncharacterized LOC106147271 NW_004955537 441598 448010 + 106147271 AGCD01070865;GBDK01041613;XR_001232084 MODEL 9035500 protein-coding LOC102020122 complement C5-like NW_004955419 6905871 6946488 + 102020122 AGCD01019866;AGCD01019867;GBCB01062706;XM_005382576;XM_005382577;XM_005382578 XP_005382633;XP_005382634;XP_005382635 MODEL 8779976 ncrna LOC102012811 uncharacterized LOC102012811 NW_004955559 2195047 2205058 - 102012811 AGCD01073700;AGCD01073701;GBBH01056100;XR_265004 MODEL 8884960 protein-coding Shmt1 serine hydroxymethyltransferase 1 ENCODES a protein that exhibits aldehyde-lyase activity (ortholog); amino acid binding (ortholog); glycine hydroxymethyltransferase activity (ortholog); INVOLVED IN 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); carnitine biosynthetic process (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH Animal Disease Models (ortholog); breast cancer (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955478 10972791 11001535 + 102019598 AGCD01056156;AGCD01056157;GBDJ01273556;XM_005402276;XM_005402277;XM_013503178 XP_005402333;XP_005402334;XP_013358632 MODEL 8837679 protein-coding LOC102022973 putative P2Y purinoceptor 10 NW_004955557 1881513 1893116 + 102022973 AGCD01073314;GBDI01357447;XM_005412636;XM_005412637;XM_013508833 XP_005412693;XP_005412694;XP_013364287 MODEL 8702277 protein-coding Krt84 keratin 84 ENCODES a protein that exhibits structural constituent of skin epidermis (ortholog); INVOLVED IN regulation of keratinocyte differentiation (ortholog); ASSOCIATED WITH lung cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN intermediate filament cytoskeleton (ortholog); keratin filament (ortholog) NW_004955547 2729046 2737142 - 102008577 AGCD01072294;XM_005411940;XM_013508447 XP_005411997;XP_013363901 MODEL 8852141 protein-coding Slc16a10 solute carrier family 16 member 10 ENCODES a protein that exhibits aromatic amino acid transmembrane transporter activity (ortholog); L-phenylalanine transmembrane transporter activity (ortholog); L-tryptophan transmembrane transporter activity (ortholog); INVOLVED IN aromatic amino acid transport (ortholog); thyroid hormone generation (ortholog); thyroid hormone transport (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell junction (ortholog); plasma membrane (ortholog) NW_004955411 35758612 35871179 + 102025888 AGCD01012457;GBCB01059371;XM_013510862;XM_013510863;XM_013510864;XM_013510865;XR_001232837;XR_001232838 XP_013366316;XP_013366317;XP_013366318;XP_013366319 MODEL 9018997 protein-coding LOC102018989 olfactory receptor 11H7-like NW_004955550 983331 984314 + 102018989 AGCD01072535;XM_005412041 XP_005412098 MODEL 9026733 protein-coding Ik IK cytokine ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mitotic cell cycle (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN chromosome (ortholog); mitotic spindle pole (ortholog); nuclear chromosome (ortholog) NW_004955418 39695 52862 - 102028750 AGCD01018664;AGCD01018665;GBBH01033048;XM_005382016 XP_005382073 MODEL 8948933 protein-coding LOC102021231 NKG2-A/NKG2-B type II integral membrane protein-like NW_004955413 7459317 7466055 + 102021231 AGCD01013820;AGCD01013821;GBDK01207340;XM_013511292 XP_013366746 MODEL 8867979 protein-coding Kctd3 potassium channel tetramerization domain containing 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 2500619 2539123 - 102012829 AGCD01005650;AGCD01005651;GBCB01039082;XM_005375446 XP_005375503 MODEL 8706796 protein-coding LOC102018620 melanoma-associated antigen 8-like NW_004955498 2322033 2323007 - 102018620 AGCD01062784;XM_013505524 XP_013360978 MODEL 9011967 protein-coding Slc5a4 solute carrier family 5 member 4 ENCODES a protein that exhibits D-glucose:sodium symporter activity (ortholog); low-affinity D-glucose:sodium symporter activity (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); proton transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog) NW_004955455 6250161 6308688 - 102018565 AGCD01045782;AGCD01045783;AGCD01045784;AGCD01045785;GBDI01245806;XM_013520298 XP_013375752 MODEL 8812114 protein-coding Wnt9a Wnt family member 9A ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); embryonic forelimb morphogenesis (ortholog); embryonic skeletal system morphogenesis (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; pancreatic cancer pathway; Wnt signaling pathway; ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955581 422028 438321 + 102016863 AGCD01075672;GBCB01076994;XM_005414245 XP_005414302 MODEL 8730162 pseudo LOC102009612 zinc finger matrin-type protein 2 pseudogene NW_004955485 7634595 7636928 - 102009612 AGCD01058668 MODEL 9056275 protein-coding LOC102007683 olfactory receptor 10AG1-like NW_004955511 725892 726854 - 102007683 AGCD01066341;XM_005408209 XP_005408266 MODEL 8747254 pseudo LOC102025116 phosphoglycerate kinase 2-like NW_004955416 1358051 1359301 - 102025116 AGCD01016834 MODEL 8979720 protein-coding LOC102003337 olfactory receptor 51G2-like NW_004955414 20918933 20919880 - 102003337 AGCD01015395;XM_005380486 XP_005380543 MODEL 405822143 scarna SCARNA14 Small Cajal body specific RNA 14 9040460 protein-coding Pyroxd1 pyridine nucleotide-disulphide oxidoreductase domain 1 ENCODES a protein that exhibits molecular sensor activity (ortholog); NAD(P)H oxidase H2O2-forming activity (ortholog); NADH dehydrogenase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); tRNA exon ligation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); sarcomere (ortholog) NW_004955413 17097859 17115148 + 102016905 AGCD01014129;GBDF01196381;XM_005379057 XP_005379114 MODEL 8824021 protein-coding Birc6 baculoviral IAP repeat containing 6 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN labyrinthine layer development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); autism spectrum disorder (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955441 740299 923920 + 102009992 AGCD01036733;AGCD01036734;AGCD01036735;AGCD01036736;AGCD01036737;AGCD01036738;AGCD01036739;AGCD01036740;GBDF01124876;XM_013517560;XM_013517561 XP_013373014;XP_013373015 MODEL 39132996 snrna U6 U6 spliceosomal RNA 8819676 protein-coding Tsc22d3 TSC22 domain family member 3 ENCODES a protein that exhibits MRF binding (ortholog); transcription regulator inhibitor activity (ortholog); INVOLVED IN body fluid secretion (ortholog); negative regulation of activation-induced cell death of T cells (ortholog); negative regulation of skeletal muscle tissue development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); hyperinsulinism (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955490 8177356 8238373 + 102017672 AGCD01060277;GBCE01115007;GBDF01157293;XM_005404695 XP_005404752 MODEL 8781413 protein-coding Etfb electron transfer flavoprotein subunit beta ENCODES a protein that exhibits electron transfer activity (ortholog); INVOLVED IN amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); respiratory electron transport chain (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH cervical cancer (ortholog); chronic kidney disease (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN electron transfer flavoprotein complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955558 1032743 1046300 + 102013655 AGCD01073411;AGCD01073412;GBCQ01010793;XM_005412686 XP_005412743 MODEL 8877199 protein-coding Smco1 single-pass membrane protein with coiled-coil domains 1 NW_004955420 12680494 12685018 - 102012968 AGCD01020884;GBCB01022329;XM_005383135 XP_005383192 MODEL 39133435 snrna U4 U4 spliceosomal RNA 9055715 protein-coding Garin3 golgi associated RAB2 interactor family member 3 INVOLVED IN acrosome assembly (ortholog); binding of sperm to zona pellucida (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN Golgi apparatus (ortholog); sperm head (ortholog) NW_004955408 11368402 11371550 - 102013145 AGCD01008308;GBDF01003424;XM_005376226 XP_005376283 MODEL 39132714 snrna U6 U6 spliceosomal RNA 8802541 protein-coding Lgmn legumain ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); endopeptidase activator activity (ortholog); peptidase activity (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); associative learning (ortholog); cellular response to amyloid-beta (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955438 14905856 14938722 - 102027677 AGCD01035355;AGCD01035356;GBBH01061269;XM_005390332 XP_005390389 MODEL 8828031 protein-coding LOC102009235 signal recognition particle 19 kDa protein NW_004955449 1420800 1421601 - 102009235 AGCD01041800;XM_005393194 XP_005393251 MODEL 8753930 ncrna LOC102005104 uncharacterized LOC102005104 NW_004955405 37762470 37765454 + 102005104 AGCD01005459;GBDF01250665;XR_001236112 MODEL 39132379 snrna U6 U6 spliceosomal RNA 8801097 protein-coding Tnfaip6 TNF alpha induced protein 6 ENCODES a protein that exhibits calcium ion binding (ortholog); carboxylesterase activity (ortholog); fibronectin binding (ortholog); INVOLVED IN fibronectin fibril organization (ortholog); hyaluronan metabolic process (ortholog); negative regulation of BMP signaling pathway (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); allergic contact dermatitis (ortholog); Arsenic Poisoning (ortholog); FOUND IN extracellular region (ortholog) NW_004955440 16915952 16944375 + 102005185 AGCD01036545;AGCD01036546;AGCD01036547;AGCD01036548;AGCD01036549;AGCD01036550;GBBH01138981;GBDI01105873;XM_013517506 XP_013372960 MODEL 8765388 protein-coding Tesmin testis expressed metallothionein like protein INVOLVED IN male meiotic nuclear division (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955422 17161396 17199649 + 102029756 AGCD01022913;AGCD01022914;GBDF01005749;XM_005384266;XM_005384267 XP_005384323;XP_005384324 MODEL 8837653 protein-coding Tbk1 TANK binding kinase 1 ENCODES a protein that exhibits identical protein binding (ortholog); nucleic acid binding (ortholog); phosphoprotein binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); antiviral innate immune response (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); anxiety disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955458 11210120 11263632 + 102020886 AGCD01047731;AGCD01047732;GBDF01193849;XM_013520995;XM_013520996 XP_013376449;XP_013376450 MODEL 8930334 protein-coding Fgf1 fibroblast growth factor 1 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN branch elongation involved in ureteric bud branching (ortholog); cellular response to heat (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); cleft lip (ortholog); FOUND IN cytosol (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955415 11151330 11245554 + 102024452 AGCD01016150;AGCD01016151;AGCD01016152;AGCD01016153;AGCD01016154;GBBH01223382;XM_005380699;XM_005380701;XM_005380702;XM_005380703;XM_005380707;XM_013512345;XM_013512346;XM_013512347;XM_013512348 XP_005380756;XP_005380758;XP_005380759;XP_005380760;XP_005380764;XP_013367799;XP_013367800;XP_013367801;XP_013367802 MODEL 730469401 misc_rna DLEU2_3 Deleted in lymphocytic leukemia 2 conserved region 3 8889608 protein-coding Rxrg retinoid X receptor gamma ENCODES a protein that exhibits identical protein binding (ortholog); molecular condensate scaffold activity (ortholog); nuclear receptor activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); heart development (ortholog); neuron differentiation (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH lung non-small cell carcinoma (ortholog); melanoma (ortholog); Myocardial Ischemia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955462 11238963 11281905 + 102005681 AGCD01049388;AGCD01049389;GBDK01322855;XM_005398248;XM_013521352;XM_013521353 XP_005398305;XP_013376806;XP_013376807 MODEL 9025334 pseudo LOC102015870 uncharacterized LOC102015870 NW_004955427 4501834 4576758 - 102015870 AGCD01026965;AGCD01026966;AGCD01026967;AGCD01026968;AGCD01026969;AGCD01026970 MODEL 9029470 pseudo LOC102012430 39S ribosomal protein L21, mitochondrial pseudogene NW_004955417 9985249 9986014 + 102012430 AGCD01018063 MODEL 626189186 scarna SCARNA15 Small Cajal body specific RNA 15 8792434 protein-coding Birc7 baculoviral IAP repeat containing 7 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of tumor necrosis factor-mediated signaling pathway (ortholog); ASSOCIATED WITH adrenocortical carcinoma (ortholog); bladder urothelial carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955528 919246 922581 - 102010730 AGCD01069547;XM_013507431 XP_013362885 MODEL 9031739 protein-coding Grxcr1 glutaredoxin and cysteine rich domain containing 1 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); calcium ion transmembrane transport (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 25 (ortholog); Deafness (ortholog); FOUND IN kinocilium (ortholog); stereocilium (ortholog) NW_004955443 4799056 4908749 - 102007375 AGCD01038222;AGCD01038223;AGCD01038224;AGCD01038225;GBDF01078342;XM_005391916 XP_005391973 MODEL 8754913 pseudo LOC102013979 amyloid beta A4 protein pseudogene NW_004955444 13139589 13140893 + 102013979 AGCD01039093 MODEL 8900963 protein-coding Tac3 tachykinin precursor 3 ENCODES a protein that exhibits neuromedin K receptor binding (ortholog); receptor ligand activity (ortholog); substance K receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); phospholipase C-activating tachykinin receptor signaling pathway (ortholog); positive regulation of blood pressure (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Delayed Puberty (ortholog); hypertension (ortholog); FOUND IN extracellular region (ortholog) NW_004955458 4765153 4771122 - 102018806 AGCD01047440;GBDF01226093;XM_005397338;XM_013520998 XP_005397395;XP_013376452 MODEL 8716779 protein-coding Kctd4 potassium channel tetramerization domain containing 4 NW_004955518 2977055 2987676 - 102013203 AGCD01067789;GBCC01038644;XM_005409082;XM_005409083 XP_005409139;XP_005409140 MODEL 9007841 protein-coding Lrrc32 leucine rich repeat containing 32 ENCODES a protein that exhibits receptor ligand inhibitor activity (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN establishment of protein localization to extracellular region (ortholog); negative regulation of activated T cell proliferation (ortholog); negative regulation of cytokine production (ortholog); ASSOCIATED WITH asthma (ortholog); brain glioblastoma multiforme (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); membrane (ortholog) NW_004955414 15296704 15309088 + 102014441 AGCD01015182;GBBH01168987;XM_005379850;XM_005379851;XM_005379852;XM_005379853;XM_013512077 XP_005379907;XP_005379908;XP_005379909;XP_005379910;XP_013367531 MODEL 8772156 protein-coding LOC102003680 uncharacterized LOC102003680 NW_004955513 4114603 4116964 + 102003680 AGCD01066920;GBDK01076605;XM_013506579 XP_013362033 MODEL 8833221 protein-coding Ttpal alpha tocopherol transfer protein like ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); melanoma (ortholog) NW_004955445 12871355 12897733 - 102020621 AGCD01039764;GBDF01223108;XM_005392480;XM_005392481;XM_005392482;XM_013518256 XP_005392537;XP_005392538;XP_005392539;XP_013373710 MODEL 9065184 protein-coding LOC102017804 vomeronasal type-1 receptor 90-like NW_004955429 12364461 12365522 - 102017804 AGCD01028715;XM_005387247 XP_005387304 MODEL 39133089 snrna U6 U6 spliceosomal RNA 8859598 protein-coding Nptx1 neuronal pentraxin 1 INVOLVED IN axonogenesis involved in innervation (ortholog); cellular response to glucose stimulus (ortholog); cellular response to potassium ion (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); genetic disease (ortholog); high grade glioma (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); glutamatergic synapse (ortholog) NW_004955506 2447429 2456612 + 102018309 AGCD01065296;GBCE01002469;XM_005407321;XM_013506119 XP_005407378;XP_013361573 MODEL 8920667 pseudo LOC102021947 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955410 10055721 10056207 + 102021947 AGCD01010788 MODEL 8728628 ncrna LOC102025118 uncharacterized LOC102025118 NW_004955416 9380213 9382086 - 102025118 AGCD01017086;GBDK01117927;XR_001233292;XR_001233293 MODEL 10137152 protein-coding LOC106147272 uncharacterized LOC106147272 NW_004955538 364011 369989 + 106147272 AGCD01070995;GBDI01050294;XM_013507818 XP_013363272 MODEL 8853044 ncrna LOC102020125 uncharacterized LOC102020125 NW_004955420 18987041 18989955 - 102020125 AGCD01021053;GBDF01288419;XR_260723 MODEL 9052608 protein-coding Lgr4 leucine rich repeat containing G protein-coupled receptor 4 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN bone mineralization (ortholog); bone remodeling (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Anosmia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955476 6611102 6629294 - 102008406 AGCD01055337;GBBH01165625;GBCB01059985;XM_013502964 XP_013358418 MODEL 9042911 ncrna LOC102004403 uncharacterized LOC102004403 NW_004955427 13583687 13585755 + 102004403 AGCD01027253;GBDF01082612;XR_001234372 MODEL 8728363 protein-coding Pyroxd2 pyridine nucleotide-disulphide oxidoreductase domain 2 INVOLVED IN mitochondrion organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Leigh disease (ortholog); lung cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955507 4384626 4407603 - 102012985 AGCD01065648;GBDK01322816;XM_005407661;XM_005407662;XM_005407663 XP_005407718;XP_005407719;XP_005407720 MODEL 39132997 snrna U6 U6 spliceosomal RNA 8984887 ncrna LOC102021233 uncharacterized LOC102021233 NW_004955471 12839000 12842044 - 102021233 AGCD01053308;GBDF01096973;XR_001237056 MODEL 9038609 ncrna LOC102022975 uncharacterized LOC102022975 NW_004955560 1124178 1126313 + 102022975 AGCD01073747;GBDK01311183;XR_265005 MODEL 8852551 protein-coding Slc16a11 solute carrier family 16 member 11 ENCODES a protein that exhibits pyruvate transmembrane transporter activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955467 9891909 9894192 + 102007209 AGCD01051535;GBDF01184767;XM_005399574;XM_005399575;XM_005399576 XP_005399631;XP_005399632;XP_005399633 MODEL 8948794 protein-coding Ikbip IKBKB interacting protein INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); response to interleukin-1 (ortholog); response to lipopolysaccharide (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955405 34600211 34619614 - 102015476 AGCD01005380;GBDK01395326;XM_005374509;XM_005374510 XP_005374566;XP_005374567 MODEL 8836441 protein-coding Sub1 SUB1 regulator of transcription ENCODES a protein that exhibits double-stranded DNA binding (ortholog); identical protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA metabolic process (ortholog); regulation of transcription by RNA polymerase II (ortholog); RNA polymerase II promoter clearance (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); transcription regulator complex (ortholog) NW_004955426 18380680 18394627 + 102023719 AGCD01026522;AGCD01026523;GBDF01003502;XM_005386159;XM_005386160 XP_005386216;XP_005386217 MODEL 126903042 protein-coding GIMAP6 GTPase, IMAP family member 6 8829036 protein-coding LOC102018625 leucine-rich repeat-containing protein 37A2-like NW_004955506 6704785 6744679 + 102018625 AGCD01065442;AGCD01065443;AGCD01065444;AGCD01065445;AGCD01065446;AGCD01065447;AGCD01065448;AGCD01065449;AGCD01065450;AGCD01065451;GBBH01032482;GBCE01006258;XM_005407497 XP_005407554 MODEL 8772045 protein-coding Tsc22d4 TSC22 domain family member 4 INVOLVED IN glucose homeostasis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); neuron cellular homeostasis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); nucleus (ortholog) NW_004955573 414984 425480 + 102023089 AGCD01074976;AGCD01074977;GBDK01081440;XM_005413727;XM_013509480 XP_005413784;XP_013364934 MODEL 8834591 protein-coding Slc5a5 solute carrier family 5 member 5 ENCODES a protein that exhibits iodide transmembrane transporter activity (ortholog); monoatomic anion:sodium symporter activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to forskolin (ortholog); cellular response to gonadotropin stimulus (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH amenorrhea (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955524 3372539 3380758 - 102012470 AGCD01068890;AGCD01068891;GBDI01013617;GBDI01016743;XM_013507280 XP_013362734 MODEL 9049007 protein-coding Wnt9b Wnt family member 9B ENCODES a protein that exhibits co-receptor binding (ortholog); receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; FOUND IN extracellular region (ortholog) NW_004955478 10816405 10841416 + 102003128 AGCD01056151;AGCD01056152;GBCQ01093789;XM_005402302 XP_005402359 MODEL 8793972 protein-coding LOC102009615 translation initiation factor IF-2-like NW_004955420 29366247 29393153 - 102009615 AGCD01021498;AGCD01021499;GBBH01125290;XM_013513409;XR_001233708 XP_013368863 MODEL 9052009 ncrna LOC102010381 uncharacterized LOC102010381 NW_004955495 7993126 7997095 - 102010381 AGCD01062174;GBCQ01010353;XR_264169 MODEL 8765453 pseudo LOC102003338 zinc finger protein 3-like NW_004955415 14712827 14722881 - 102003338 AGCD01016308 MODEL 9038088 protein-coding LOC102007688 spermatogenesis-associated protein 31E1-like NW_004955515 2514202 2517200 - 102007688 AGCD01067256;GBDK01098218;XM_005408922;XM_013506865 XP_005408979;XP_013362319 MODEL 8813836 ncrna LOC102021950 uncharacterized LOC102021950 NW_004955464 6997967 7031483 + 102021950 AGCD01050051;AGCD01050052;AGCD01050053;GBDJ01111080;XR_001236684;XR_001236685;XR_263208 MODEL 9034354 protein-coding Krt9 keratin 9 INVOLVED IN intermediate filament organization (ortholog); skin development (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); Diffuse Palmoplantar Keratoderma (ortholog); epidermolytic palmoplantar keratoderma (ortholog); FOUND IN keratin filament (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955451 15890101 15896282 - 102004664 AGCD01043638;AGCD01043639;GBDJ01039244;XM_005394410 XP_005394467 MODEL 8928725 pseudo LOC102018991 serine/threonine/tyrosine-interacting protein pseudogene NW_004955551 886953 887825 + 102018991 AGCD01072679 MODEL 9021951 protein-coding Tespa1 thymocyte expressed, positive selection associated 1 ENCODES a protein that exhibits phospholipase binding (ortholog); INVOLVED IN COP9 signalosome assembly (ortholog); intracellular protein localization (ortholog); positive regulation of T cell differentiation in thymus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); lung cancer (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955458 2084931 2108328 - 102010450 AGCD01047214;GBDK01266984;XM_013521032 XP_013376486 MODEL 8980950 ncrna LOC102012432 uncharacterized LOC102012432 NW_004955418 28369715 28371889 + 102012432 AGCD01019436;GBDF01147816;XR_260592 MODEL 8909141 protein-coding Garin4 golgi associated RAB2 interactor family member 4 INVOLVED IN Golgi organization (ortholog); ASSOCIATED WITH Moebius syndrome (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955406 4870655 4872941 - 102020751 AGCD01005709;GBDF01007969;XM_005374742 XP_005374799 MODEL 9019199 protein-coding Dspp dentin sialophosphoprotein ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN ameloblast differentiation (ortholog); amelogenesis (ortholog); biomineral tissue development (ortholog); ASSOCIATED WITH Autosomal Dominant Deafness 39 with Dentinogenesis Imperfecta 1 (ortholog); dentin dysplasia (ortholog); dentin dysplasia type II (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955474 2254842 2259303 - 102029177 AGCD01054286;AGCD01054287;XM_005401458 XP_005401515 MODEL 8725901 protein-coding Smco3 single-pass membrane protein with coiled-coil domains 3 NW_004955413 11551720 11560566 - 102029383 AGCD01013964;GBCQ01006581;XM_005379006;XM_005379007;XM_005379010;XM_013511646;XM_013511647;XM_013511648;XM_013511649 XP_005379063;XP_005379064;XP_005379067;XP_013367100;XP_013367101;XP_013367102;XP_013367103 MODEL 8783759 protein-coding Ttr transthyretin ENCODES a protein that exhibits hormone binding (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN retinoid metabolic process (ortholog); PARTICIPATES IN forkhead class A signaling pathway; retinoic acid metabolic pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenosquamous lung carcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955402 18921235 18927976 + 102018348 AGCD01000543;GBDF01125276;XM_005372743 XP_005372800 MODEL 39132717 snrna U6 U6 spliceosomal RNA 8977057 pseudo LOC102017808 DEP domain-containing protein 1B-like NW_004955434 20258595 20259982 - 102017808 AGCD01032614 MODEL 8939945 protein-coding Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase ENCODES a protein that exhibits heat shock protein binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN negative regulation of fatty acid beta-oxidation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955411 35999583 36025805 + 102028280 AGCD01012462;AGCD01012463;GBBH01053291;XM_005377897;XM_005377898;XM_005377899;XM_005377900;XR_001232832 XP_005377954;XP_005377955;XP_005377956;XP_005377957 MODEL 8997578 protein-coding Shmt2 serine hydroxymethyltransferase 2 ENCODES a protein that exhibits amino acid binding (ortholog); chromatin binding (ortholog); glycine hydroxymethyltransferase activity (ortholog); INVOLVED IN formate biosynthetic process (ortholog); glycine biosynthetic process (ortholog); glycine metabolic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN BRISC complex (ortholog); cytoplasm (ortholog); mitochondrial inner membrane (ortholog) NW_004955458 4957614 4962691 + 102022166 AGCD01047446;GBCQ01036093;XM_005397350 XP_005397407 MODEL 10282279 protein-coding LOC106147273 translation initiation factor IF-2-like NW_004955538 1039751 1041579 + 106147273 AGCD01071042;GBDJ01214472;XM_013507819 XP_013363273 MODEL 39132718 snrna U6 U6 spliceosomal RNA 8882573 protein-coding Tnfaip8 TNF alpha induced protein 8 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); molecular sequestering activity (ortholog); small molecule binding (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955408 38872305 38986932 + 102003095 AGCD01009055;AGCD01009056;AGCD01009057;AGCD01009058;GBDK01285833;XM_005376545;XM_005376549;XM_013507017;XM_013507021;XM_013507024;XM_013507030 XP_005376602;XP_005376606;XP_013362471;XP_013362475;XP_013362478;XP_013362484 MODEL 8931069 protein-coding Rxylt1 ribitol xylosyltransferase 1 ENCODES a protein that exhibits ribitol beta-1,4-xylosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); congenital muscular dystrophy-dystroglycanopathy type A10 (ortholog); FOUND IN catalytic complex (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955458 10649364 10674913 + 102007862 AGCD01047698;AGCD01047699;GBCQ01005457;GBDJ01181625;XM_013521008 XP_013376462 MODEL 730469148 scarna SCARNA15 Small Cajal body specific RNA 15 39133436 snrna U4 U4 spliceosomal RNA 8838746 protein-coding Bivm basic, immunoglobulin-like variable motif containing FOUND IN nucleoplasm (ortholog) NW_004955404 8327295 8358453 - 102028925 AGCD01003350;AGCD01003351;GBDI01324218;XM_005374026;XM_005374027;XM_013515915 XP_005374083;XP_005374084;XP_013371369 MODEL 9003294 protein-coding Kctd5 potassium channel tetramerization domain containing 5 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955442 14658612 14684928 - 102020293 AGCD01037832;GBDJ01064500;XM_005391416 XP_005391473 MODEL 8889042 protein-coding Lrrc34 leucine rich repeat containing 34 INVOLVED IN gene expression (ortholog); telomere maintenance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955420 44454 66222 - 102015015 AGCD01020530;GBBH01149709;XM_005382958;XM_005382959 XP_005383015;XP_005383016 MODEL 39133091 snrna U6 U6 spliceosomal RNA 8944491 ncrna LOC102005111 uncharacterized LOC102005111 NW_004955456 1951198 1954207 + 102005111 AGCD01046243;GBDF01252185;XR_001236331;XR_001236332 MODEL 8902892 ncrna LOC102012812 uncharacterized LOC102012812 NW_004955446 2324596 2337167 - 102012812 AGCD01039981;GBDF01040343;XR_001235685 MODEL 8935282 ncrna LOC102009239 uncharacterized LOC102009239 NW_004955586 997656 1002493 + 102009239 AGCD01076049;GBDJ01242970;XR_265115 MODEL 8832322 protein-coding Sucla2 succinate-CoA ligase ADP-forming subunit beta ENCODES a protein that exhibits acid-thiol ligase activity (ortholog); malate-CoA ligase activity (ortholog); succinate-CoA ligase (ADP-forming) activity (ortholog); INVOLVED IN malate metabolic process (ortholog); succinate metabolic process (ortholog); succinyl-CoA metabolic process (ortholog); PARTICIPATES IN citric acid cycle pathway; ASSOCIATED WITH cervical cancer (ortholog); Deglutition Disorders (ortholog); Developmental Disabilities (ortholog); FOUND IN catalytic complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955431 1678720 1737234 - 102013436 AGCD01029913;AGCD01029914;AGCD01029915;GBBH01005588;XM_005387550 XP_005387607 MODEL 8737172 protein-coding Wrap53 WD repeat containing antisense to TP53 ENCODES a protein that exhibits histone binding (ortholog); identical protein binding (ortholog); protein carrier activity (ortholog); INVOLVED IN Cajal body organization (ortholog); positive regulation of DNA repair (ortholog); positive regulation of double-strand break repair (ortholog); ASSOCIATED WITH Autosomal Recessive Dyskeratosis Congenita (ortholog); autosomal recessive dyskeratosis congenita 3 (ortholog); Body Weight (ortholog); FOUND IN Cajal body (ortholog); chromosome (ortholog); cytosol (ortholog) NW_004955467 9225506 9240756 - 102006011 AGCD01051484;GBDK01319101;XM_005399465;XM_013522145 XP_005399522;XP_013377599 MODEL 8977750 protein-coding Tbkbp1 TBK1 binding protein 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); ankylosing spondylitis (ortholog); lung cancer (ortholog) NW_004955451 13344661 13358590 - 102016877 AGCD01043470;AGCD01043471;GBCB01111798;GBCE01037358;XM_005394605 XP_005394662 MODEL 39132381 snrna U6 U6 spliceosomal RNA 9059369 pseudo LOC102015874 ELAV-like protein 2 NW_004955510 6263150 6264904 - 102015874 AGCD01066304 MODEL 8726016 pseudo LOC102007689 DNA-3-methyladenine glycosylase pseudogene NW_004955516 1140332 1141187 + 102007689 AGCD01067413 MODEL 8723035 ncrna LOC102025119 uncharacterized LOC102025119 NW_004955416 31751765 31788345 + 102025119 AGCD01017770;AGCD01017771;AGCD01017772;AGCD01017773;GBDF01288200;XR_001233286;XR_260453;XR_260454;XR_260455;XR_260456 MODEL 730469275 misc_rna DLEU2_5 Deleted in lymphocytic leukemia 2 conserved region 5 9057425 pseudo LOC102021234 olfactory receptor 52B4-like NW_004955414 20036051 20036980 - 102021234 AGCD01015352 MODEL 39132998 snrna U6 U6 spliceosomal RNA 8928234 protein-coding Krtap29-1 keratin associated like protein 29-1 NW_004955451 15702932 15712934 - 102026706 AGCD01043634;GBDI01234356;XM_005394393;XM_013519184;XR_001235962 XP_005394450;XP_013374638 MODEL 8921963 protein-coding Grxcr2 glutaredoxin and cysteine rich domain containing 2 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); inner ear receptor cell stereocilium organization (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 101 (ortholog); FOUND IN microvillus (ortholog); stereocilium base (ortholog); stereocilium shaft (ortholog) NW_004955415 8203968 8220148 + 102019798 AGCD01016067;GBDF01042113;XM_005380686 XP_005380743 MODEL 10261092 protein-coding LOC106147274 spidroin-2-like NW_004955538 3357625 3359043 - 106147274 AGCD01071162;GBDF01223063;GBDF01223064;XM_013507824 XP_013363278 MODEL 8833292 pseudo LOC102022977 zinc finger protein DZIP1 pseudogene NW_004955563 1496656 1499178 + 102022977 AGCD01074150;XM_005413154 MODEL 9005236 ncrna LOC102003682 uncharacterized LOC102003682 NW_004955432 17288234 17299687 - 102003682 AGCD01031120;GBDF01039986;XR_001234642;XR_261531 MODEL 8991751 ncrna LOC102018626 uncharacterized LOC102018626 NW_004955507 2802458 2809081 + 102018626 AGCD01065594;GBDF01153258;XR_264374 MODEL 8890664 protein-coding Slc16a12 solute carrier family 16 member 12 ENCODES a protein that exhibits creatine transmembrane transporter activity (ortholog); uniporter activity (ortholog); INVOLVED IN creatine transmembrane transport (ortholog); creatinine metabolic process (ortholog); ASSOCIATED WITH cataract 47 (ortholog); coloboma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955425 3474814 3560138 + 102015744 AGCD01025290;AGCD01025291;GBCQ01098505;XM_005385849 XP_005385906 MODEL 8974771 pseudo LOC102012433 calcyclin-binding protein pseudogene NW_004955419 25409135 25411025 - 102012433 AGCD01020385 MODEL 8996212 protein-coding Gimap6 GTPase, IMAP family member 6 INVOLVED IN autophagosome organization (ortholog); autophagy (ortholog); cell redox homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955491 5125041 5130182 - 102026332 AGCD01060471;GBBH01064402;XM_013504618 XP_013360072 MODEL 8965741 protein-coding Nptx2 neuronal pentraxin 2 INVOLVED IN associative learning (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); ASSOCIATED WITH high grade glioma (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extrinsic component of postsynaptic specialization membrane (ortholog); glutamatergic synapse (ortholog); presynapse (ortholog) NW_004955460 14437755 14448932 + 102030286 AGCD01048755;GBDF01276617;XM_005397917 XP_005397974 MODEL 8725229 protein-coding Slc5a7 solute carrier family 5 member 7 ENCODES a protein that exhibits choline binding (ortholog); choline transmembrane transporter activity (ortholog); choline:sodium symporter activity (ortholog); INVOLVED IN acetylcholine biosynthetic process (ortholog); choline transport (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH asthma (ortholog); autosomal dominant distal hereditary motor neuronopathy 7 (ortholog); Charcot-Marie-Tooth disease type 2 (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); clathrin-coated endocytic vesicle (ortholog) NW_004955470 11673491 11694404 + 102006334 AGCD01052897;GBBH01014798;XM_005400796 XP_005400853 MODEL 8795497 ncrna LOC102009616 uncharacterized LOC102009616 NW_004955487 8301569 8308007 + 102009616 AGCD01059433;GBDF01280847;XR_263987 MODEL 8739637 protein-coding Garin5a golgi associated RAB2 interactor 5A INVOLVED IN cell morphogenesis (ortholog); defense response to virus (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); sperm head (ortholog) NW_004955559 676597 683690 + 102016855 AGCD01073607;GBDF01007572;XM_013509021;XM_013509022 XP_013364475;XP_013364476 MODEL 8809134 ncrna LOC102010382 uncharacterized LOC102010382 NW_004955424 3479982 3493499 + 102010382 AGCD01024311;GBDF01055317;XR_001234144 MODEL 8992261 pseudo LOC102003345 tubulin alpha-1C chain-like NW_004955483 529540 535066 - 102003345 AGCD01057622;XR_263877 MODEL 8800041 pseudo LOC102020127 afadin- and alpha-actinin-binding protein-like NW_004955487 8077337 8080047 + 102020127 AGCD01059424 MODEL 8795955 protein-coding Fgf10 fibroblast growth factor 10 ENCODES a protein that exhibits chemoattractant activity (ortholog); fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); angiogenesis (ortholog); animal organ formation (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); aplasia of lacrimal and salivary glands (ortholog); Breast Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); nucleus (ortholog) NW_004955446 18163117 18244840 + 102029240 AGCD01040396;GBDF01112025;XM_005392731 XP_005392788 MODEL 8906420 protein-coding Ttyh1 tweety family member 1 ENCODES a protein that exhibits calcium ion binding (ortholog); chloride channel activity (ortholog); volume-sensitive anion channel activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); cell-cell adhesion (ortholog); cell-substrate adhesion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN filopodium membrane (ortholog); filopodium tip (ortholog); membrane (ortholog) NW_004955567 1523534 1538963 + 102012137 AGCD01074479;AGCD01074480;GBCE01034550;XM_005413376;XM_005413377;XM_013509268 XP_005413433;XP_005413434;XP_013364722 MODEL 9001903 pseudo LOC102021951 39S ribosomal protein L47, mitochondrial pseudogene NW_004955464 13716913 13717742 + 102021951 AGCD01050291 MODEL 9005705 protein-coding Lgr5 leucine rich repeat containing G protein-coupled receptor 5 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN epithelial cell proliferation involved in renal tubule morphogenesis (ortholog); hair follicle development (ortholog); inner ear development (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH ankyloglossia (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog); trans-Golgi network membrane (ortholog) NW_004955405 11507083 11574504 + 102018887 AGCD01004834;AGCD01004835;GBBH01016179;XM_005374681 XP_005374738 MODEL 8971570 protein-coding Shoc1 shortage in chiasmata 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN reciprocal meiotic recombination (ortholog); resolution of meiotic recombination intermediates (ortholog); synaptonemal complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN chromosome (ortholog); condensed nuclear chromosome (ortholog) NW_004955419 15563949 15644502 + 102008317 AGCD01020083;AGCD01020084;GBDF01052150;XM_005382715;XM_005382716;XM_005382717 XP_005382772;XP_005382773;XP_005382774 MODEL 8761450 protein-coding LOC102013981 uncharacterized LOC102013981 NW_004955567 1595757 1628166 + 102013981 AGCD01074484;AGCD01074485;GBDK01330281;XM_013509232 XP_013364686 MODEL 8716362 protein-coding Tac4 tachykinin precursor 4 ENCODES a protein that exhibits receptor ligand activity (ortholog); signaling receptor binding (ortholog); substance K receptor binding (ortholog); INVOLVED IN detection of temperature stimulus involved in sensory perception of pain (ortholog); negative regulation of sensory perception of pain (ortholog); negative regulation of systemic arterial blood pressure (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955451 11755645 11763281 + 102018879 AGCD01043364;GBBH01091448;XM_005394188 XP_005394245 MODEL 8981198 protein-coding Tet1 tet methylcytosine dioxygenase 1 ENCODES a protein that exhibits DNA 5-methylcytosine dioxygenase activity (ortholog); DNA binding (ortholog); iron ion binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); chromatin remodeling (ortholog); dendrite morphogenesis (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); esophageal cancer (ortholog); FOUND IN chromosome (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955425 20767406 20857165 + 102023376 AGCD01025760;AGCD01025761;AGCD01025762;AGCD01025763;AGCD01025764;GBDF01239503;XM_013514773 XP_013370227 MODEL 8789620 protein-coding Tsen15 tRNA splicing endonuclease subunit 15 INVOLVED IN tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Developmental Disabilities (ortholog); FOUND IN tRNA-intron endonuclease complex (ortholog) NW_004955406 22787090 22806231 + 102029824 AGCD01006161;GBDK01323609;XM_005375050 XP_005375107 MODEL 39133437 snrna U4 U4 spliceosomal RNA 8833960 pseudo LOC102017809 LIM/homeobox protein Lhx2 pseudogene NW_004955529 937279 938433 + 102017809 AGCD01069660 MODEL 9042548 pseudo LOC102012813 general transcription factor IIH subunit 2-like NW_004955446 10843415 10844092 + 102012813 AGCD01040191 MODEL 9033445 protein-coding Smco4 single-pass membrane protein with coiled-coil domains 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955414 976105 1029825 + 102024890 AGCD01014756;GBBH01006678;GBCE01024628;XM_013512087 XP_013367541 MODEL 8802016 ncrna LOC102004406 uncharacterized LOC102004406 NW_004955429 12619449 12635931 - 102004406 AGCD01028726;AGCD01028727;GBDF01079147;XR_261325 MODEL 8722193 protein-coding Dst dystonin ENCODES a protein that exhibits integrin binding (ortholog); microtubule binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN axonogenesis (ortholog); cell motility (ortholog); cytoplasmic microtubule organization (ortholog); ASSOCIATED WITH anodontia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); cell leading edge (ortholog) NW_004955502 3175918 3610823 + 102027880 AGCD01064312;AGCD01064313;AGCD01064314;AGCD01064315;AGCD01064316;AGCD01064317;GBDF01287480;XM_005406890;XM_005406892;XM_005406893;XM_013505819;XM_013505820;XM_013505821;XM_013505822;XM_013505823 XP_005406947;XP_005406949;XP_005406950;XP_013361273;XP_013361274;XP_013361275;XP_013361276;XP_013361277 MODEL 9015824 protein-coding Etfdh electron transfer flavoprotein dehydrogenase ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); electron transfer activity (ortholog); electron-transferring-flavoprotein dehydrogenase activity (ortholog); INVOLVED IN electron transport chain (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); response to oxidative stress (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955471 12282601 12308792 + 102018591 AGCD01053282;AGCD01053283;AGCD01053284;AGCD01053285;GBBH01142163;GBDF01124988;XM_005400964 XP_005401021 MODEL 8768343 protein-coding Suclg1 succinate-CoA ligase GDP/ADP-forming subunit alpha ENCODES a protein that exhibits acid-thiol ligase activity (ortholog); GDP binding (ortholog); malate-CoA ligase activity (ortholog); INVOLVED IN malate metabolic process (ortholog); succinate metabolic process (ortholog); succinyl-CoA metabolic process (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN catalytic complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955424 2810557 2838827 + 102009399 AGCD01024298;AGCD01024299;GBDF01000382;XM_005385451 XP_005385508 MODEL 8712092 ncrna LOC102015875 uncharacterized LOC102015875 NW_004955429 21522975 21526531 + 102015875 AGCD01029005;GBDF01223359;XR_261378 MODEL 8806870 protein-coding Tbl1x transducin beta like 1 X-linked ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN histone deacetylase complex (ortholog); mitotic spindle (ortholog); nucleus (ortholog) NW_004955499 7706973 7896168 + 102019083 AGCD01063598;AGCD01063599;AGCD01063600;AGCD01063601;AGCD01063602;AGCD01063603;AGCD01063604;AGCD01063605;AGCD01063606;AGCD01063607;GBCQ01126230;XM_005406543;XM_005406544 XP_005406600;XP_005406601 MODEL 8938702 protein-coding Tnfaip8l1 TNF alpha induced protein 8 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of TOR signaling (ortholog); ASSOCIATED WITH Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955495 4334443 4344283 - 102006588 AGCD01061914;GBDK01194751;XM_005405789 XP_005405846 MODEL 8821589 pseudo LOC102021952 ribonuclease T2 pseudogene NW_004955411 30267102 30267877 + 102021952 AGCD01012251 MODEL 8976735 protein-coding Rybp RING1 and YY1 binding protein ENCODES a protein that exhibits DNA binding (ortholog); nucleic acid binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); brachydactyly (ortholog); Congenital Microtia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 15728778 15803150 + 102005268 AGCD01021991;AGCD01021992;GBDF01118383;GBDI01356522;XM_013513794 XP_013369248 MODEL 616940615 scarna SCARNA16 Small Cajal body specific RNA 16 9002298 protein-coding Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); IkappaB kinase activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); canonical NF-kappaB signal transduction (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN adenosine signaling pathway; FasL mediated signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anemia (ortholog); breast cancer (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955536 611965 658647 - 102009105 AGCD01070732;GBDI01225670;XM_005410510 XP_005410567 MODEL 8706008 protein-coding Gsap gamma-secretase activating protein ENCODES a protein that exhibits amyloid-beta binding (ortholog); INVOLVED IN positive regulation of amyloid-beta formation (ortholog); regulation of proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN trans-Golgi network (ortholog) NW_004955410 7740548 7810563 + 102015486 AGCD01010723;GBCE01057270;GBCQ01176435;XM_013510519 XP_013365973 MODEL 10149347 ncrna LOC106147275 uncharacterized LOC106147275 NW_004955538 1369207 1372835 - 106147275 AGCD01071056;GBBH01014216;XR_001232087 MODEL 39133092 snrna U6 U6 spliceosomal RNA 8949287 pseudo LOC102005113 basigin pseudogene NW_004955408 34149587 34150365 + 102005113 AGCD01008895;XM_005376594 MODEL 8773039 pseudo LOC102009242 nucleolar and spindle-associated protein 1 pseudogene NW_004955402 63057108 63065990 + 102009242 AGCD01001653 MODEL 8784197 protein-coding Kctd6 potassium channel tetramerization domain containing 6 ENCODES a protein that exhibits ankyrin binding (ortholog); cullin family protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of smoothened signaling pathway (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog) NW_004955430 1667385 1670203 - 102006804 AGCD01029130;GBCQ01175341;GBDK01323183;XM_013515693 XP_013371147 MODEL 8895184 protein-coding Lrrc36 leucine rich repeat containing 36 ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog) NW_004955484 9254049 9310033 - 102005597 AGCD01058413;AGCD01058414;GBDI01076538;XM_005403659;XM_013503895 XP_005403716;XP_013359349 MODEL 8974647 protein-coding CUNH2orf80 chromosome unknown C2orf80 homolog ASSOCIATED WITH urinary bladder cancer (ortholog) NW_004955457 6940355 6961464 + 102007305 AGCD01046861;GBDJ01410635;XM_005396967;XM_005396968;XM_013520672 XP_005397024;XP_005397025;XP_013376126 MODEL 39132382 snrna U6 U6 spliceosomal RNA 8733858 protein-coding LOC102018994 uncharacterized LOC102018994 NW_004955555 1543178 1564850 + 102018994 AGCD01073087;AGCD01073088;AGCD01073089;AGCD01073090;GBBH01204503;XM_013508744;XR_001232305;XR_001232306;XR_001232307;XR_001232308 XP_013364198 MODEL 9053410 ncrna LOC102007690 uncharacterized LOC102007690 NW_004955435 16245726 16250388 - 102007690 AGCD01033304;GBDF01049547;XR_261703 MODEL 9053769 ncrna LOC102025121 uncharacterized LOC102025121 NW_004955418 20489068 20501173 + 102025121 AGCD01019228;GBDF01017286;XR_260574 MODEL 8981697 protein-coding Fgf11 fibroblast growth factor 11 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); intellectual disability (ortholog) NW_004955467 9482467 9488992 - 102012941 AGCD01051513;GBDI01383783;XM_005399489;XM_013522234 XP_005399546;XP_013377688 MODEL 9049336 protein-coding LOC102020128 histone-lysine N-methyltransferase SETMAR ENCODES a protein that exhibits DNA binding (ortholog); DNA topoisomerase binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN cell population proliferation (ortholog); DNA catabolic process (ortholog); DNA double-strand break processing (ortholog); FOUND IN chromosome (ortholog); condensed chromosome (ortholog); nucleolus (ortholog) NW_004955421 9066906 9080352 - 102020128 AGCD01021832;AGCD01021833;GBDF01208977;XM_005383745 XP_005383802 MODEL 8817169 protein-coding Ttyh2 tweety family member 2 ENCODES a protein that exhibits calcium ion binding (ortholog); chloride channel activity (ortholog); volume-sensitive anion channel activity (ortholog); INVOLVED IN L-glutamate transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955553 1137762 1179195 + 102005973 AGCD01072871;GBDF01088643;XM_005412225 XP_005412282 MODEL 39133000 snrna U6 U6 spliceosomal RNA 8971129 ncrna LOC102021236 uncharacterized LOC102021236 NW_004955474 3181086 3181714 + 102021236 AGCD01054325;GBDF01160031;XR_263593 MODEL 8885428 protein-coding Lgr6 leucine rich repeat containing G protein-coupled receptor 6 INVOLVED IN bone regeneration (ortholog); cell population proliferation (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN vesicle (ortholog) NW_004955406 38274998 38381677 + 102005893 AGCD01006599;AGCD01006600;GBBH01110778;GBBH01131676;XM_013522356 XP_013377810 MODEL 8861544 protein-coding Shoc2 SHOC2 leucine rich repeat scaffold protein ENCODES a protein that exhibits protein phosphatase 1 binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN cellular response to growth hormone stimulus (ortholog); negative regulation of keratinocyte differentiation (ortholog); negative regulation of neural precursor cell proliferation (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atopic dermatitis (ortholog); atrial heart septal defect (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955485 430493 517767 - 102012201 AGCD01058447;AGCD01058448;AGCD01058449;AGCD01058450;AGCD01058451;GBDJ01177936;XM_005403740;XM_005403743;XM_005403744;XM_013504084;XM_013504085 XP_005403797;XP_005403800;XP_005403801;XP_013359538;XP_013359539 MODEL 40834595 protein-coding KRTAP4-3 keratin associated protein 4-3 8845125 protein-coding LOC102018628 olfactory receptor 8K3-like NW_004955511 1357599 1358540 + 102018628 AGCD01066365;XM_013506373 XP_013361827 MODEL 8794618 protein-coding Gimd1 GIMAP family P-loop NTPase domain containing 1 NW_004955496 3049862 3060961 + 102007133 AGCD01062280;XM_005406216 XP_005406273 MODEL 8782713 protein-coding Slc16a13 solute carrier family 16 member 13 ASSOCIATED WITH lung squamous cell carcinoma (ortholog); sarcoma (ortholog); Short Stature with Nonspecific Skeletal Abnormalities 1 (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955467 9894833 9900295 - 102006645 AGCD01051535;GBDJ01261667;XM_005399572;XM_013522101;XM_013522102 XP_005399629;XP_013377555;XP_013377556 MODEL 8785040 protein-coding Nptxr neuronal pentraxin receptor ENCODES a protein that exhibits pentraxin receptor activity (ortholog); protein phosphatase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN neuron projection development (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); regulation of postsynaptic specialization assembly (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Breast Cancer, Familial (ortholog); congestive heart failure (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955413 24924464 24941417 - 102010468 AGCD01014387;GBBH01021841;GBCE01141976;XM_005379659 XP_005379716 MODEL 9015427 protein-coding Slc5a8 solute carrier family 5 member 8 ENCODES a protein that exhibits lactate transmembrane transporter activity (ortholog); monocarboxylate:sodium symporter activity (ortholog); nicotinate transmembrane transporter activity (ortholog); INVOLVED IN acetate transport (ortholog); chloride transport (ortholog); iodide transport (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Colonic Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); GINS complex (ortholog) NW_004955405 36717579 36769074 - 102025972 AGCD01005425;AGCD01005426;AGCD01005427;GBCE01137053;XM_005374548 XP_005374605 MODEL 9055945 protein-coding Wrap73 WD repeat containing, antisense to TP73 INVOLVED IN mitotic spindle assembly (ortholog); positive regulation of non-motile cilium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog) NW_004955486 7992684 8006121 + 102026530 AGCD01059144;AGCD01059145;GBDF01119400;XM_005404146;XM_005404147 XP_005404203;XP_005404204 MODEL 9043617 pseudo LOC102003347 ras-related protein Rab-5A pseudogene NW_004955419 16896961 16899862 + 102003347 AGCD01020131;AGCD01020132;AGCD01020133 MODEL 8925155 protein-coding Garin5b golgi associated RAB2 interactor family member 5B INVOLVED IN cell morphogenesis (ortholog); flagellated sperm motility (ortholog); penetration of zona pellucida (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN sperm head (ortholog) NW_004955567 884761 890440 + 102023644 AGCD01074443;AGCD01074444;XM_005413323 XP_005413380 MODEL 8834284 pseudo LOC102005116 solute carrier family 25 member 36 pseudogene NW_004955459 839058 893923 - 102005116 AGCD01047955;AGCD01047956;AGCD01047957 MODEL 39132719 snrna U6 U6 spliceosomal RNA 730469404 misc_rna DLEU2_5 Deleted in lymphocytic leukemia 2 conserved region 5 9027401 pseudo LOC102015884 heterogeneous nuclear ribonucleoprotein M-like NW_004955434 16085495 16089791 - 102015884 AGCD01032511 MODEL 8746986 pseudo LOC102013982 vomeronasal type-1 receptor 4-like NW_004955569 807810 808559 + 102013982 AGCD01074620 MODEL 8834281 protein-coding LOC102003683 taste receptor type 2 member 7-like NW_004955432 18798901 18799800 + 102003683 AGCD01031161;XM_005388153 XP_005388210 MODEL 8797959 ncrna LOC102022984 uncharacterized LOC102022984 NW_004955583 903467 919107 - 102022984 AGCD01075873;AGCD01075874;GBBH01177276;XR_001232507;XR_001232508;XR_001232509;XR_001232510;XR_265102 MODEL 8758145 protein-coding Tet2 tet methylcytosine dioxygenase 2 ENCODES a protein that exhibits DNA 5-methylcytosine dioxygenase activity (ortholog); ferrous iron binding (ortholog); zinc ion binding (ortholog); INVOLVED IN chromosomal 5-methylcytosine DNA demethylation, oxidation pathway (ortholog); cytosine metabolic process (ortholog); hematopoietic stem cell homeostasis (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); breast cancer (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955496 3885684 3963056 - 102010383 AGCD01062302;AGCD01062303;AGCD01062304;GBCC01026201;XM_005406227;XM_013505406;XM_013505407;XM_013505408;XM_013505409;XR_001231406 XP_005406284;XP_013360860;XP_013360861;XP_013360862;XP_013360863 MODEL 8955703 protein-coding Fgf12 fibroblast growth factor 12 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); heparin binding (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); chemical synaptic transmission (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); developmental and epileptic encephalopathy 47 (ortholog); genetic disease (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955420 15783184 16310743 + 102009951 AGCD01020981;AGCD01020982;AGCD01020983;AGCD01020984;AGCD01020985;AGCD01020986;AGCD01020987;AGCD01020988;AGCD01020989;GBDI01270942;XM_005383217;XM_013513605 XP_005383274;XP_013369059 MODEL 39133438 snrna U4 U4 spliceosomal RNA 8977235 protein-coding Ryk receptor like tyrosine kinase ENCODES a protein that exhibits ATP binding (ortholog); frizzled binding (ortholog); protein kinase activity (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis (ortholog); chemorepulsion of dopaminergic neuron axon (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cleft palate (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955501 4360051 4419083 + 102024706 AGCD01064128;AGCD01064129;GBCE01055771;XM_005406801;XM_013505792;XM_013505793 XP_005406858;XP_013361246;XP_013361247 MODEL 8859237 protein-coding LOC102009244 high mobility group protein B1-like NW_004957564 9 553 + 102009244 AGCD01080960;XM_005415232 XP_005415289 MODEL 8745048 ncrna LOC102017810 uncharacterized LOC102017810 NW_004955436 21304021 21311466 + 102017810 AGCD01034051;GBBH01051674;XR_261805 MODEL 8844647 protein-coding LOC102004408 olfactory receptor 8K5-like NW_004955511 1428393 1429358 + 102004408 AGCD01066366;XM_013506374 XP_013361828 MODEL 8720362 protein-coding Etfrf1 electron transfer flavoprotein regulatory factor 1 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); INVOLVED IN negative regulation of oxidative phosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrion (ortholog) NW_004955413 20287287 20294430 + 102029279 AGCD01014212;GBDF01080150;XM_005379098;XM_013511449 XP_005379155;XP_013366903 MODEL 8717162 ncrna LOC102007693 uncharacterized LOC102007693 NW_004955437 532416 541946 + 102007693 AGCD01034142;AGCD01034143;AGCD01034144;GBDJ01142993;XR_261816 MODEL 8919299 protein-coding Tacc1 transforming acidic coiled-coil containing protein 1 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); nuclear glucocorticoid receptor binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cerebral cortex development (ortholog); interkinetic nuclear migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); epilepsy (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); midbody (ortholog); nucleus (ortholog) NW_004955463 14314201 14409848 + 102025554 AGCD01049907;AGCD01049908;GBBH01076350;GBDK01232861;XM_013521504 XP_013376958 MODEL 8708410 ncrna LOC102012439 uncharacterized LOC102012439 NW_004955421 24954942 25002542 - 102012439 AGCD01022225;AGCD01022226;AGCD01022227;GBCQ01157706;XR_001233829;XR_260827 MODEL 8708132 protein-coding Tnfaip8l2 TNF alpha induced protein 8 like 2 INVOLVED IN negative regulation of inflammatory response (ortholog); negative regulation of T cell activation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog); nucleus (ortholog) NW_004955588 514567 517314 + 102026059 AGCD01076115;GBDF01159306;XM_005414498 XP_005414555 MODEL 9024430 protein-coding Bkgd beta-keto-L-gulonate decarboxylase ENCODES a protein that exhibits hydrolase activity, acting on ester bonds (ortholog); zinc ion binding (ortholog); INVOLVED IN DNA damage response (ortholog); regulation of DNA repair (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955414 780009 809016 - 102023894 AGCD01014746;AGCD01014747;AGCD01014748;AGCD01014749;GBCQ01000810;XM_005379702;XM_005379703;XM_005379704;XM_013511833 XP_005379759;XP_005379760;XP_005379761;XP_013367287 MODEL 9038514 protein-coding Tsen2 tRNA splicing endonuclease subunit 2 INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); tRNA-intron endonuclease complex (ortholog) NW_004955429 14970105 14997459 + 102018956 AGCD01028787;AGCD01028788;GBDK01001142;XM_005387020;XM_005387021;XM_013515519;XR_001234537;XR_261333 XP_005387077;XP_005387078;XP_013370973 MODEL 8774104 protein-coding Gsc goosecoid homeobox ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); dorsal/ventral neural tube patterning (ortholog); ear development (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Short Stature, Auditory Canal Atresia, Mandibular Hypoplasia, Skeletal Abnormalities (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); transcription regulator complex (ortholog) NW_004955438 17653149 17655091 + 102019434 AGCD01035447;GBDI01295671;XM_005390387 XP_005390444 MODEL 8983867 pseudo LOC102009624 nuclear receptor-binding factor 2 pseudogene NW_004955495 3092379 3093300 + 102009624 AGCD01061822 MODEL 39133093 snrna U6 U6 spliceosomal RNA 8791821 pseudo LOC102010387 selenide, water dikinase 2-like NW_004955502 7355026 7356276 - 102010387 AGCD01064441 MODEL 10235814 ncrna LOC106147276 uncharacterized LOC106147276 NW_004955538 732968 736907 + 106147276 AGCD01071036;GBDF01187214;XR_001232090 MODEL 39133439 snrna U4 U4 spliceosomal RNA 8740862 protein-coding Kctd7 potassium channel tetramerization domain containing 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN intracellular glutamate homeostasis (ortholog); intracellular potassium ion homeostasis (ortholog); membrane hyperpolarization (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Ataxia (ortholog); Cafe-au-Lait Spots (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955456 8627763 8637882 + 102007513 AGCD01046496;GBBH01158498;XM_005396715 XP_005396772 MODEL 8979178 protein-coding Dstn destrin, actin depolymerizing factor ENCODES a protein that exhibits actin filament binding (ortholog); actin filament severing activity (ortholog); INVOLVED IN actin filament depolymerization (ortholog); cell motility (ortholog); positive regulation of actin filament depolymerization (ortholog); ASSOCIATED WITH Acute Otitis Media; Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955415 26567457 26598978 + 102009832 AGCD01016599;AGCD01016600;GBCB01022551;XM_005380907 XP_005380964 MODEL 8842262 protein-coding Pyurf PIGY upstream open reading frame INVOLVED IN protein stabilization (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog) NW_004955474 11944579 11945906 + 102008310 AGCD01054643;GBCE01000203;XM_013523090 XP_013378544 MODEL 9024315 protein-coding Lrrc38 leucine rich repeat containing 38 ENCODES a protein that exhibits potassium channel activator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); FOUND IN voltage-gated potassium channel complex (ortholog) NW_004955527 4265027 4288222 + 102021040 AGCD01069501;AGCD01069502;GBBH01135094;GBCB01125691;XM_013507425 XP_013362879 MODEL 8962845 protein-coding Smcr8 SMCR8-C9orf72 complex subunit ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of autophagosome assembly (ortholog); negative regulation of gene expression (ortholog); negative regulation of macroautophagy (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955478 11002174 11015123 - 102020663 AGCD01056157;GBDF01222841;XM_005402280 XP_005402337 MODEL 8834264 protein-coding LOC102003349 uncharacterized LOC102003349 NW_004955420 23430746 23448623 - 102003349 AGCD01021246;AGCD01021247;AGCD01021248;GBDJ01304436;XM_005383606 XP_005383663 MODEL 8744465 ncrna LOC102018998 uncharacterized LOC102018998 NW_004955578 1037639 1043605 + 102018998 AGCD01075507;AGCD01075508;GBDF01176403;XR_265087 MODEL 39132720 snrna U6 U6 spliceosomal RNA 8736863 protein-coding Suclg2 succinate-CoA ligase GDP-forming subunit beta ENCODES a protein that exhibits GDP binding (ortholog); protein-containing complex binding (ortholog); succinate-CoA ligase (GDP-forming) activity (ortholog); INVOLVED IN succinate metabolic process (ortholog); succinyl-CoA metabolic process (ortholog); tricarboxylic acid cycle (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH Animal Disease Models (ortholog); anxiety disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955421 20089471 20350334 + 102015207 AGCD01022087;AGCD01022088;AGCD01022089;AGCD01022090;GBCQ01008812;XM_005383819 XP_005383876 MODEL 9000039 ncrna LOC102005117 uncharacterized LOC102005117 NW_004955460 7231987 7232762 - 102005117 AGCD01048479;GBDF01013953;XR_001236514;XR_263035 MODEL 9050043 pseudo LOC102025125 golgin subfamily A member 7 pseudogene NW_004955419 5623710 5624828 + 102025125 AGCD01019830 MODEL 39133001 snrna U6 U6 spliceosomal RNA 9014446 protein-coding LOC102021954 heparan sulfate glucosamine 3-O-sulfotransferase 3B1 NW_004955467 3209822 3249484 - 102021954 AGCD01051331;AGCD01051332;GBCQ01153180;XM_005399335 XP_005399392 MODEL 730469102 scarna SCARNA17 small Cajal body-specific RNA 17 8968893 protein-coding Ttyh3 tweety family member 3 ENCODES a protein that exhibits calcium ion binding (ortholog); chloride channel activity (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); L-glutamate transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955460 12736086 12766907 + 102014219 AGCD01048663;AGCD01048664;GBDF01080224;GBDI01137898;XM_005397872;XM_005397873 XP_005397929;XP_005397930 MODEL 8913815 ncrna LOC102003684 uncharacterized LOC102003684 NW_004955520 82188 91113 - 102003684 AGCD01068004;GBDI01367358;XR_264580 MODEL 8712105 protein-coding Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon ENCODES a protein that exhibits identical protein binding (ortholog); IkappaB kinase activity (ortholog); K48-linked polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to virus (ortholog); gene expression (ortholog); immune response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial membrane (ortholog) NW_004955406 42056014 42077701 + 102017949 AGCD01006696;GBDK01143454;XM_005375388;XM_005375389;XM_005375390;XM_005375392;XM_005375393 XP_005375445;XP_005375446;XP_005375447;XP_005375449;XP_005375450 MODEL 8726496 protein-coding Krtcap2 keratinocyte associated protein 2 ENCODES a protein that exhibits enzyme activator activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN protein N-linked glycosylation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); oligosaccharyltransferase complex (ortholog) NW_004955545 1642578 1645699 - 102027681 AGCD01071864;GBDF01000034;XM_005411578;XM_013508306 XP_005411635;XP_013363760 MODEL 8885086 protein-coding Lgsn lengsin, lens protein with glutamine synthetase domain ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955502 522492 551842 + 102024138 AGCD01064244;AGCD01064245;GBDK01178703;XM_005406877;XM_013505813 XP_005406934;XP_013361267 MODEL 8796034 protein-coding Shox SHOX homeobox ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); autistic disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955499 716476 725455 + 102005614 AGCD01063271;GBCB01029721;XM_005406505 XP_005406562 MODEL 8869786 pseudo LOC102018632 protein SET-like NW_004955432 3642624 3644695 + 102018632 AGCD01030672 MODEL 9012535 pseudo LOC102012815 poly(rC)-binding protein 2 pseudogene NW_004955576 1428099 1429219 + 102012815 AGCD01075376 MODEL 8991466 protein-coding Tet3 tet methylcytosine dioxygenase 3 ENCODES a protein that exhibits DNA 5-methylcytosine dioxygenase activity (ortholog); methyl-CpG binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN epigenetic programing of male pronucleus (ortholog); positive regulation of gene expression via chromosomal CpG island demethylation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); female pronucleus (ortholog) NW_004955424 11612124 11722130 - 102006148 AGCD01024571;AGCD01024572;AGCD01024573;GBDK01361608;XM_005385528;XM_005385529;XM_005385532;XM_013514633;XM_013514634;XM_013514636 XP_005385585;XP_005385586;XP_005385589;XP_013370087;XP_013370088;XP_013370090 MODEL 9044828 protein-coding Npvf neuropeptide VF precursor ENCODES a protein that exhibits neuropeptide activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN negative regulation of gonadotropin secretion (ortholog); neuropeptide signaling pathway (ortholog); FOUND IN extracellular region (ortholog) NW_004955410 27161730 27165341 - 102025095 AGCD01011210;XM_013510506 XP_013365960 MODEL 8803964 protein-coding Slc16a14 solute carrier family 16 member 14 ASSOCIATED WITH cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955453 5011638 5044259 + 102029585 AGCD01044702;AGCD01044703;AGCD01044704;GBCE01147531;GBDJ01095780;XM_005395421 XP_005395478 MODEL 8837841 protein-coding Gin1 gypsy retrotransposon integrase 1 ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955418 10898069 10918460 + 102026007 AGCD01018988;GBCE01042578;XM_005382188;XM_005382189;XM_005382190;XM_005382191 XP_005382245;XP_005382246;XP_005382247;XP_005382248 MODEL 8711305 protein-coding Ryr1 ryanodine receptor 1 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium-induced calcium release activity (ortholog); enzyme binding (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); cellular response to ATP (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955468 879807 1000118 - 102016148 AGCD01051742;AGCD01051743;AGCD01051744;AGCD01051745;AGCD01051746;AGCD01051747;AGCD01051748;GBCB01005975;GBDI01002716;XM_013522408 XP_013377862 MODEL 8803699 pseudo LOC102017817 ubiquitin-like protein 7 pseudogene NW_004955442 13459192 13461151 + 102017817 AGCD01037774 MODEL 8866399 protein-coding CUNH3orf18 chromosome unknown C3orf18 homolog ASSOCIATED WITH lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955532 2339628 2349324 - 102013757 AGCD01070224;GBCB01111799;XM_005410302;XM_005410303 XP_005410359;XP_005410360 MODEL 730469174 misc_rna DLEU2_6 Deleted in lymphocytic leukemia 2 conserved region 6 8800326 protein-coding Slc5a9 solute carrier family 5 member 9 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955464 10378071 10407597 - 102005123 AGCD01050125;GBCQ01095601;XM_005398631;XM_005398634;XM_005398636;XM_013521753;XM_013521754;XM_013521755;XM_013521756;XM_013521757 XP_005398688;XP_005398691;XP_005398693;XP_013377207;XP_013377208;XP_013377209;XP_013377210;XP_013377211 MODEL 8934547 protein-coding Dstyk dual serine/threonine and tyrosine protein kinase INVOLVED IN cellular response to fibroblast growth factor stimulus (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN anchoring junction (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955406 40922972 40971433 - 102006095 AGCD01006667;GBDJ01279572;XM_005375347 XP_005375404 MODEL 8813000 pseudo LOC102020129 THO complex subunit 7 homolog pseudogene NW_004955492 3881271 3882782 + 102020129 AGCD01060704 MODEL 8858183 protein-coding Slc16a2 solute carrier family 16 member 2 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); identical protein binding (ortholog); thyroid hormone transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); amino acid metabolic process (ortholog); hormone transport (ortholog); ASSOCIATED WITH Allan-Herndon-Dudley syndrome (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) NW_004955562 305850 455764 + 102023963 AGCD01073921;AGCD01073922;AGCD01073923;AGCD01073924;AGCD01073925;GBDK01218930;XM_005413081 XP_005413138 MODEL 9010572 pseudo LOC102021239 ras-related protein Rab-33B pseudogene NW_004955475 1677079 1677769 + 102021239 AGCD01054758 MODEL 8910313 ncrna LOC102007697 uncharacterized LOC102007697 NW_004955438 985521 989683 - 102007697 AGCD01034966;GBDF01049911;XR_001235136 MODEL 8760564 pseudo LOC102012453 heterogeneous nuclear ribonucleoprotein A3-like NW_004955425 6920489 6940923 - 102012453 AGCD01025375;AGCD01025376 MODEL 9030704 ncrna LOC102022985 uncharacterized LOC102022985 NW_004955402 30355688 30371406 - 102022985 AGCD01000769;GBCQ01030393;XR_259071 MODEL 8916280 protein-coding Blcap BLCAP apoptosis inducing factor INVOLVED IN apoptotic nuclear changes (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); urinary bladder cancer (ortholog) NW_004955445 19116945 19127469 + 102018038 AGCD01039911;GBDF01089233;XM_005392557;XR_001235621 XP_005392614 MODEL 8768551 protein-coding Gsc2 goosecoid homeobox 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) NW_004955442 18824187 18825760 + 102017820 AGCD01038020;AGCD01038021;GBCQ01189947;XM_005391872 XP_005391929 MODEL 8829781 protein-coding Fgf13 fibroblast growth factor 13 ENCODES a protein that exhibits beta-tubulin binding (ortholog); microtubule binding (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN apoptotic process (ortholog); branching morphogenesis of a nerve (ortholog); cerebral cortex cell migration (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 90 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955489 6122707 6621624 + 102008113 AGCD01059957;AGCD01059958;AGCD01059959;AGCD01059960;AGCD01059961;AGCD01059962;GBCB01043793;XM_005404571;XM_005404572;XM_005404573;XM_013504503 XP_005404628;XP_005404629;XP_005404630;XP_013359957 MODEL 8835166 protein-coding Krtcap3 keratinocyte associated protein 3 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955469 9416732 9418523 + 102005460 AGCD01052503;GBDF01041820;XM_005400504 XP_005400561 MODEL 8897189 pseudo LOC102010388 uncharacterized LOC102010388 NW_004955503 3309922 3337412 - 102010388 AGCD01064622 MODEL 8729472 pseudo LOC102009251 heterogeneous nuclear ribonucleoprotein D-like pseudogene NW_004955455 3817536 3818804 + 102009251 AGCD01045653;XR_262827 MODEL 8702863 protein-coding Garnl3 GTPase activating Rap/RanGAP domain like 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog) NW_004955419 1190059 1332553 - 102004710 AGCD01019644;AGCD01019645;AGCD01019646;GBDF01256859;GBDI01309723;XM_005382431 XP_005382488 MODEL 8775530 protein-coding LOC102004411 olfactory receptor 5D14-like NW_004955511 585205 608647 + 102004411 AGCD01066333;AGCD01066334;AGCD01066335;AGCD01066336;XM_013506359 XP_013361813 MODEL 9050556 protein-coding Ethe1 ETHE1 persulfide dioxygenase ENCODES a protein that exhibits identical protein binding (ortholog); iron ion binding (ortholog); sulfur dioxygenase activity (ortholog); INVOLVED IN glutathione metabolic process (ortholog); sulfide oxidation (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ethylmalonic encephalopathy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955555 1262860 1279714 - 102016105 AGCD01073068;AGCD01073069;GBDJ01127270;XM_005412440 XP_005412497 MODEL 9053548 protein-coding LOC102015886 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase-like NW_004955435 22449820 22464762 + 102015886 AGCD01033503;GBCQ01004122;XM_005389080 XP_005389137 MODEL 8902944 protein-coding Tacc2 transforming acidic coiled-coil containing protein 2 ENCODES a protein that exhibits nuclear receptor binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN astral microtubule organization (ortholog); cell population proliferation (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955477 338990 552100 + 102016051 AGCD01055485;AGCD01055486;AGCD01055487;AGCD01055488;AGCD01055489;AGCD01055490;AGCD01055491;GBDF01046178;XM_005401923;XM_005401927;XM_005401929;XM_005401930;XM_013503062;XM_013503063;XM_013503064;XM_013503065;XM_013503066;XM_013503067;XM_013503068;XM_013503069 XP_005401980;XP_005401984;XP_005401986;XP_005401987;XP_013358516;XP_013358517;XP_013358518;XP_013358519;XP_013358520;XP_013358521;XP_013358522;XP_013358523 MODEL 39133003 snrna U6 U6 spliceosomal RNA 8716418 protein-coding CUNH3orf38 chromosome unknown C3orf38 homolog INVOLVED IN positive regulation of apoptotic process (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN nucleus (ortholog) NW_004955407 5339389 5348894 - 102022463 AGCD01006912;AGCD01006913;GBDK01359287;XM_005375526;XM_005375527 XP_005375583;XP_005375584 MODEL 8892796 protein-coding Tnfaip8l3 TNF alpha induced protein 8 like 3 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol transfer activity (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolic process (ortholog); phospholipid transport (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955409 3427332 3451809 + 102025659 AGCD01009241;GBDK01355472;XM_005376653;XM_005376654;XM_005376655;XM_013510325;XR_001232642;XR_001232643;XR_001232644 XP_005376710;XP_005376711;XP_005376712;XP_013365779 MODEL 8861004 ncrna LOC102018635 uncharacterized LOC102018635 NW_004955433 21104127 21129938 + 102018635 AGCD01031916;GBDJ01222197;XR_261603 MODEL 39132383 snrna U6 U6 spliceosomal RNA 9006267 protein-coding Tsen34 tRNA splicing endonuclease subunit 34 INVOLVED IN tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Deglutition Disorders (ortholog); intellectual disability (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); tRNA-intron endonuclease complex (ortholog) NW_004955604 84072 89419 - 102011716 AGCD01076861;GBCE01054099;XM_005414852;XM_005414853;XM_005414854;XM_005414855;XM_013510089 XP_005414909;XP_005414910;XP_005414911;XP_005414912;XP_013365543 MODEL 10150966 ncrna LOC106147277 uncharacterized LOC106147277 NW_004955538 2176753 2180564 - 106147277 AGCD01071105;XR_001232091 MODEL 8941435 protein-coding Lrrc39 leucine rich repeat containing 39 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog) NW_004955435 4900976 4961310 - 102003902 AGCD01032861;AGCD01032862;AGCD01032863;AGCD01032864;AGCD01032865;AGCD01032866;GBBH01082390;XM_005388794;XM_013516440 XP_005388851;XP_013371894 MODEL 8743062 pseudo LOC102017822 60S acidic ribosomal protein P0 pseudogene NW_004955563 1331294 1333153 - 102017822 AGCD01074141 MODEL 8813744 pseudo LOC102019003 rab11 family-interacting protein 2 pseudogene NW_004955589 742663 744819 - 102019003 AGCD01076181 MODEL 8901578 protein-coding LOC102025126 glutathione S-transferase omega-1 NW_004955485 6391364 6403112 - 102025126 AGCD01058618;GBCB01001864;GBDJ01025506;XM_005403783 XP_005403840 MODEL 8987453 ncrna LOC102004412 uncharacterized LOC102004412 NW_004955513 2245105 2262741 + 102004412 AGCD01066871;AGCD01066872;GBDF01085197;XR_001231734;XR_264457 MODEL 8901153 protein-coding LOC102003352 inositol 1,4,5-trisphosphate receptor type 1 NW_004955421 8603264 8928051 - 102003352 AGCD01021821;AGCD01021822;AGCD01021823;AGCD01021824;AGCD01021825;AGCD01021826;GBCE01055382;GBDF01285678;XM_013513709;XM_013513710;XM_013513711;XM_013513712;XM_013513713;XM_013513714;XM_013513715 XP_013369163;XP_013369164;XP_013369165;XP_013369166;XP_013369167;XP_013369168;XP_013369169 MODEL 730469578 scarna SCARNA17 small Cajal body-specific RNA 17 9003733 pseudo LOC102003685 39S ribosomal protein L22, mitochondrial pseudogene NW_004955520 2732442 2737379 + 102003685 AGCD01068082 MODEL 8779469 protein-coding LOC102021956 alpha-2-macroglobulin ENCODES a protein that exhibits brain-derived neurotrophic factor binding (ortholog); calcium-dependent protein binding (ortholog); endopeptidase inhibitor activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); acute-phase response (ortholog); embryonic liver development (ortholog); PARTICIPATES IN Alzheimer's disease pathway; immune response pathway; inflammatory response pathway; ASSOCIATED WITH otitis media; Otitis Media with Effusion; suppurative otitis media; FOUND IN extracellular region NW_004955413 6019457 6062366 + 102021956 AGCD01013700;AGCD01013701;AGCD01013702;AGCD01013703;GBDI01021440;XM_005378889 XP_005378946 MODEL 8799028 protein-coding Qars1 glutaminyl-tRNA synthetase 1 ENCODES a protein that exhibits glutamine-tRNA ligase activity (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN brain development (ortholog); glutaminyl-tRNA aminoacylation (ortholog); negative regulation of apoptotic signaling pathway (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; homocarnosinosis pathway; ASSOCIATED WITH Ataxia (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955532 1093444 1100591 - 102008659 AGCD01070165;GBDF01001584;XM_005410187 XP_005410244 MODEL 8776917 protein-coding Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma ENCODES a protein that exhibits identical protein binding (ortholog); K63-linked polyubiquitin modification-dependent protein binding (ortholog); linear polyubiquitin binding (ortholog); INVOLVED IN anoikis (ortholog); B cell homeostasis (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN FasL mediated signaling pathway; interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myocardial infarction (ortholog); anemia (ortholog); Behcet's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); IkappaB kinase complex (ortholog) NW_004955580 1053823 1069802 + 102006084 AGCD01075642;AGCD01075643;GBDI01021108;XM_005414210;XM_005414211;XM_005414213;XM_005414214;XM_013509705;XM_013509706 XP_005414267;XP_005414268;XP_005414270;XP_005414271;XP_013365159;XP_013365160 MODEL 8910885 protein-coding Shox2 SHOX homeobox 2 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN cardiac atrium morphogenesis (ortholog); cardiac pacemaker cell differentiation (ortholog); cardiac right atrium morphogenesis (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); cholangiocarcinoma (ortholog); cleft palate (ortholog) NW_004955448 8937656 8947890 - 102024863 AGCD01041456;GBBH01225102;XM_005393094;XM_005393095 XP_005393151;XP_005393152 MODEL 39133440 snrna U4 U4 spliceosomal RNA 8764433 protein-coding LOC102012817 histone H2B type 3-B NW_004955581 91596 93803 - 102012817 AGCD01075657;XM_005414232 XP_005414289 MODEL 8998028 protein-coding Tub TUB bipartite transcription factor ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); intraciliary transport particle A binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN intraciliary transport (ortholog); phagocytosis, recognition (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); fundus dystrophy (ortholog); lung cancer (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955414 23832741 23919697 + 102014553 AGCD01015527;AGCD01015528;AGCD01015529;AGCD01015530;GBDF01276958;XM_005380209;XM_005380210;XM_013512014 XP_005380266;XP_005380267;XP_013367468 MODEL 8898993 protein-coding Kctd8 potassium channel tetramerization domain containing 8 ENCODES a protein that exhibits G protein-coupled neurotransmitter receptor activity (ortholog); INVOLVED IN regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN postsynapse (ortholog); presynaptic active zone membrane (ortholog); presynaptic membrane (ortholog) NW_004955443 3605845 3836717 + 102006620 AGCD01038197;AGCD01038198;AGCD01038199;AGCD01038200;AGCD01038201;AGCD01038202;GBDJ01115972;XM_005391914 XP_005391971 MODEL 8795519 protein-coding LOC102010393 uncharacterized LOC102010393 NW_004955428 1963436 1974145 + 102010393 AGCD01027626;GBBH01018275;XM_005386840 XP_005386897 MODEL 8874633 protein-coding Tex10 testis expressed 10 ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); MLL1 complex (ortholog); nucleus (ortholog) NW_004955419 25382222 25445492 + 102012760 AGCD01020382;AGCD01020383;AGCD01020384;AGCD01020385;GBDF01046141;XM_005382811;XM_005382812;XM_005382813;XM_005382814 XP_005382868;XP_005382869;XP_005382870;XP_005382871 MODEL 8904270 protein-coding Ginm1 glycosylated integral membrane protein 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955439 11661013 11688004 - 102025289 AGCD01035917;AGCD01035918;AGCD01035919;GBCQ01062223;XM_013517382 XP_013372836 MODEL 8927481 protein-coding Ryr2 ryanodine receptor 2 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium-induced calcium release activity (ortholog); calmodulin binding (ortholog); INVOLVED IN calcium ion export (ortholog); calcium ion transmembrane import into cytosol (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); arrhythmogenic right ventricular dysplasia 9 (ortholog); FOUND IN A band (ortholog); calcium channel complex (ortholog); extrinsic component of cytoplasmic side of plasma membrane (ortholog) NW_004955492 2647597 3275512 - 102016064 AGCD01060680;AGCD01060681;AGCD01060682;AGCD01060683;AGCD01060684;AGCD01060685;AGCD01060686;AGCD01060687;AGCD01060688;AGCD01060689;AGCD01060690;AGCD01060691;AGCD01060692;AGCD01060693;GBCE01082492;GBDJ01219452;XM_013504700;XM_013504701;XM_013504702;XM_013504703;XM_013504704;XM_013504705;XM_013504706 XP_013360154;XP_013360155;XP_013360156;XP_013360157;XP_013360158;XP_013360159;XP_013360160 MODEL 8882643 protein-coding Smdt1 single-pass membrane protein with aspartate rich tail 1 ENCODES a protein that exhibits channel activator activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); cellular response to calcium ion starvation (ortholog); mitochondrial calcium ion homeostasis (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); uniplex complex (ortholog) NW_004955413 27480938 27485729 + 102004688 AGCD01014509;GBDF01082917;XM_005379397;XM_005379398;XM_013511583 XP_005379454;XP_005379455;XP_013367037 MODEL 8885404 pseudo LOC102005120 centromere protein H pseudogene NW_004955462 13884190 13890236 - 102005120 AGCD01049434 MODEL 8962398 protein-coding Wrn WRN RecQ like helicase ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); 3'-5' exonuclease activity (ortholog); 3'-flap-structured DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cellular response to gamma radiation (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH acanthosis nigricans (ortholog); acute myeloid leukemia (ortholog); anxiety disorder (ortholog); FOUND IN centrosome (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955463 7495243 7633532 + 102030614 AGCD01049734;AGCD01049735;AGCD01049736;AGCD01049737;AGCD01049738;AGCD01049739;AGCD01049740;AGCD01049741;GBDF01144959;XM_005398387;XM_005398388;XM_005398389;XM_005398390;XM_013521530 XP_005398444;XP_005398445;XP_005398446;XP_005398447;XP_013376984 MODEL 9024715 protein-coding Sucnr1 succinate receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); signaling receptor activity (ortholog); INVOLVED IN energy homeostasis (ortholog); G protein-coupled receptor signaling pathway (ortholog); glucose homeostasis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955448 3485713 3494115 + 102007830 AGCD01041335;GBDJ01374861;XM_005393040 XP_005393097 MODEL 8864225 protein-coding LOC102020132 aldo-keto reductase family 1 member B10 NW_004955494 7924412 7928689 - 102020132 AGCD01061558;XM_005405509 XP_005405566 MODEL 9047487 pseudo LOC102013992 DCN1-like protein 1 pseudogene NW_004955403 2970789 2975016 - 102013992 AGCD01001743 MODEL 8818691 protein-coding Slc16a3 solute carrier family 16 member 3 ENCODES a protein that exhibits lactate transmembrane transporter activity (ortholog); lactate:proton symporter activity (ortholog); pyruvate transmembrane transporter activity (ortholog); INVOLVED IN lactate transmembrane transport (ortholog); plasma membrane lactate transport (ortholog); pyruvate catabolic process (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); lateral plasma membrane (ortholog) NW_004955506 935783 945014 - 102013105 AGCD01065241;GBBH01139889;XM_005407207;XM_013506039;XM_013506040;XM_013506041;XM_013506042 XP_005407264;XP_013361493;XP_013361494;XP_013361495;XP_013361496 MODEL 8883284 ncrna LOC102021241 uncharacterized LOC102021241 NW_004955418 6388627 6419369 - 102021241 AGCD01018875;GBDF01074556;XR_260540 MODEL 8779106 pseudo LOC102007698 V-type proton ATPase subunit F pseudogene NW_004955438 4435333 4445285 + 102007698 AGCD01035043;AGCD01035044 MODEL 39133094 snrna U6 U6 spliceosomal RNA 8976770 protein-coding Tbl1xr1 TBL1X/Y related 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA binding (ortholog); histone binding (ortholog); INVOLVED IN adipose tissue development (ortholog); blastocyst hatching (ortholog); fat pad development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 41 (ortholog); FOUND IN histone deacetylase complex (ortholog); mitotic spindle (ortholog); nucleus (ortholog) NW_004955420 6546529 6705481 - 102007127 AGCD01020689;GBCB01056293;XM_005383024;XM_005383029;XM_013513511;XM_013513512;XM_013513513;XM_013513514;XM_013513515 XP_005383081;XP_005383086;XP_013368965;XP_013368966;XP_013368967;XP_013368968;XP_013368969 MODEL 9051602 ncrna LOC102022986 uncharacterized LOC102022986 NW_004955402 35983014 36086474 - 102022986 AGCD01000910;AGCD01000911;AGCD01000912;GBDF01084664;XR_001232816;XR_001232817;XR_001232818;XR_259079 MODEL 8807301 protein-coding Gsdma gasdermin A ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); pyroptotic inflammatory response (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955451 14650342 14663609 + 102006857 AGCD01043565;GBDF01254326;XM_005394337;XM_005394338;XM_013519193;XM_013519194 XP_005394394;XP_005394395;XP_013374647;XP_013374648 MODEL 39133095 snrna U6 U6 spliceosomal RNA 8781105 protein-coding Blk BLK proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); positive regulation of insulin secretion (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); diabetes mellitus (ortholog); Kawasaki disease (ortholog) NW_004955403 52825397 52874007 + 102028368 AGCD01003019;AGCD01003020;GBBH01183458;XM_005373820;XM_005373821;XM_005373822;XM_005373823;XM_013514535 XP_005373877;XP_005373878;XP_005373879;XP_005373880;XP_013369989 MODEL 8717855 protein-coding Npw neuropeptide W ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); INVOLVED IN feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955442 15241140 15244387 - 102012031 AGCD01037860;AGCD01037861;GBDK01264615;XM_013517652 XP_013373106 MODEL 8978965 protein-coding Tsen54 tRNA splicing endonuclease subunit 54 INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); tRNA-type intron splice site recognition and cleavage (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebellar hypoplasia (ortholog); FOUND IN tRNA-intron endonuclease complex (ortholog) NW_004955553 2367476 2376704 + 102027464 AGCD01072935;GBDF01083927;XM_005412297;XM_013508627;XM_013508628 XP_005412354;XP_013364081;XP_013364082 MODEL 8920384 protein-coding Slc60a1 solute carrier family 60 member 1 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955406 41286679 41315666 + 102010023 AGCD01006677;GBDJ01061263;XM_005375362 XP_005375419 MODEL 8795949 protein-coding Dleu7 deleted in lymphocytic leukemia 7 NW_004955431 4205391 4220305 - 102029215 AGCD01029989;XM_005387603 XP_005387660 MODEL 39133096 snrna U6 U6 spliceosomal RNA 8714189 protein-coding Dtd1 D-aminoacyl-tRNA deacylase 1 ENCODES a protein that exhibits DNA binding (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955415 27089117 27195034 + 102018386 AGCD01016622;AGCD01016623;GBDF01081467;XM_005380934;XM_005380935 XP_005380991;XP_005380992 MODEL 9014004 pseudo LOC102009626 U6 snRNA-associated Sm-like protein LSm6 pseudogene NW_004955423 13610988 13611230 + 102009626 AGCD01023749 MODEL 8896051 protein-coding Etnk1 ethanolamine kinase 1 ENCODES a protein that exhibits ethanolamine kinase activity (ortholog); INVOLVED IN phosphatidylethanolamine biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955413 18036646 18094875 + 102024781 AGCD01014167;GBDF01044052;XM_005379081 XP_005379138 MODEL 8768395 ncrna LOC102012454 uncharacterized LOC102012454 NW_004955426 21276896 21279599 - 102012454 AGCD01026583;GBDF01235356;XR_261214 MODEL 9007408 protein-coding LOC102025127 somatostatin-like NW_004955420 20082135 20083273 + 102025127 AGCD01021071;XM_005383250 XP_005383307 MODEL 39133097 snrna U6 U6 spliceosomal RNA 9020739 protein-coding CUNH3orf62 chromosome unknown C3orf62 homolog INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955532 1243732 1245499 - 102011802 AGCD01070174;GBDF01008216;GBDI01135952;XM_005410196 XP_005410253 MODEL 9022618 protein-coding LOC102003354 phylloquinone omega-hydroxylase CYP4F2-like NW_004955495 7648769 7675912 - 102003354 AGCD01062155;AGCD01062156;XM_005406061 XP_005406118 MODEL 8988551 protein-coding Garre1 granule associated Rac and RHOG effector 1 ENCODES a protein that exhibits CCR4-NOT complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN Rac protein signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN P-body (ortholog) NW_004955468 3883615 3973288 + 102020997 AGCD01051872;AGCD01051873;AGCD01051874;AGCD01051875;AGCD01051876;AGCD01051877;AGCD01051878;GBDI01225313;XM_013522293 XP_013377747 MODEL 39131492 protein-coding TNFAIP8L3 TNF alpha induced protein 8 like 3 8714229 pseudo LOC102018637 dnaJ homolog subfamily B member 11-like NW_004955524 100914 102457 - 102018637 AGCD01068664 MODEL 39133441 snrna U4 U4 spliceosomal RNA 8889988 protein-coding Krtdap keratinocyte differentiation associated protein INVOLVED IN epidermis development (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog); FOUND IN extracellular region (ortholog); lamellar body (ortholog) NW_004955468 4713332 4716212 - 102019049 AGCD01051919;GBDI01000520;XM_005400053 XP_005400110 MODEL 8997263 ncrna LOC102009252 uncharacterized LOC102009252 NW_004955407 17252038 17275416 - 102009252 AGCD01007243;AGCD01007244;AGCD01007245;AGCD01007246;GBDF01238047;XR_001231027;XR_259564;XR_259565 MODEL 39132721 snrna U6 U6 spliceosomal RNA 10353895 protein-coding LOC106147278 uncharacterized LOC106147278 NW_004955408 749219 749528 - 106147278 AGCD01007929;GBDK01006569;XM_013507880 XP_013363334 MODEL 8887943 protein-coding Tnfrsf11a TNF receptor superfamily member 11a ENCODES a protein that exhibits cytokine binding (ortholog); transmembrane signaling receptor activity (ortholog); tumor necrosis factor receptor activity (ortholog); INVOLVED IN adaptive immune response (ortholog); cellular response to zinc ion starvation (ortholog); circadian temperature homeostasis (ortholog); ASSOCIATED WITH Alveolar Bone Loss (ortholog); autosomal recessive osteopetrosis 7 (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); membrane raft (ortholog) NW_004955402 46242329 46298157 + 102008484 AGCD01001155;GBDK01284418;XM_005373177 XP_005373234 MODEL 8743063 protein-coding LOC102017825 vomeronasal type-1 receptor 3-like NW_004955569 1124261 1125758 - 102017825 AGCD01074639;XM_005413519 XP_005413576 MODEL 8959594 protein-coding Lhb luteinizing hormone subunit beta INVOLVED IN luteinizing hormone signaling pathway (ortholog); PARTICIPATES IN luteinizing hormone signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Bradycardia (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cytoplasm (ortholog) NW_004955559 1656106 1657192 + 102025951 AGCD01073658;XM_005415296 XP_005415353 MODEL 8817522 protein-coding Kctd9 potassium channel tetramerization domain containing 9 ENCODES a protein that exhibits cullin family protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell maturation (ortholog); gene expression (ortholog); natural killer cell degranulation (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955403 48349349 48373903 - 102024523 AGCD01002917;AGCD01002918;GBDF01157051;XM_005373718;XM_013514111 XP_005373775;XP_013369565 MODEL 8706051 ncrna LOC102015894 uncharacterized LOC102015894 NW_004955440 9879399 9883532 - 102015894 AGCD01036385;XR_001235270 MODEL 8884071 protein-coding LOC102019004 uncharacterized LOC102019004 NW_004955593 267249 672416 + 102019004 AGCD01076371;AGCD01076372;AGCD01076373;AGCD01076374;AGCD01076375;AGCD01076376;AGCD01076377;AGCD01076378;AGCD01076379;AGCD01076380;AGCD01076381;AGCD01076382;AGCD01076383;AGCD01076384;AGCD01076385;AGCD01076386;AGCD01076387;AGCD01076388;AGCD01076389;AGCD01076390;AGCD01076391;AGCD01076392;AGCD01076393;AGCD01076394;AGCD01076395;GBDF01262450;GBDJ01343577;XM_005414632 XP_005414689 MODEL 8881797 pseudo LOC102004416 RE1-silencing transcription factor-like NW_004955515 4007565 4012720 + 102004416 AGCD01067313 MODEL 8933343 protein-coding Npy neuropeptide Y ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); neuropeptide activity (ortholog); neuropeptide Y receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult feeding behavior (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); PARTICIPATES IN neuropeptide Y metabolic pathway; ASSOCIATED WITH absence epilepsy (ortholog); AIDS Dementia Complex (ortholog); alcohol dependence (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); GABA-ergic synapse (ortholog) NW_004955410 26348388 26355232 + 102020431 AGCD01011193;GBDI01171542;XM_005377419 XP_005377476 MODEL 730469350 scarna SCARNA17 small Cajal body-specific RNA 17 8893878 protein-coding Tacc3 transforming acidic coiled-coil containing protein 3 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN astral microtubule organization (ortholog); cell population proliferation (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955514 973457 986640 + 102016301 AGCD01067028;GBCQ01189113;XM_005408701 XP_005408758 MODEL 8765178 protein-coding LOC102020133 39S ribosomal protein L47, mitochondrial-like NW_004955423 1553573 1554480 + 102020133 AGCD01023442;XM_005385038 XP_005385095 MODEL 8812664 protein-coding LOC102009630 U8 snoRNA-decapping enzyme-like NW_004955501 7101160 7103076 - 102009630 AGCD01064204;GBDF01154480;XM_005406843 XP_005406900 MODEL 8749536 protein-coding Fgf14 fibroblast growth factor 14 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); chemical synaptic transmission (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH cartilage disease (ortholog); cervical cancer (ortholog); cognitive disorder (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955404 8704344 9329917 + 102003829 AGCD01003357;AGCD01003358;AGCD01003359;AGCD01003360;AGCD01003361;AGCD01003362;AGCD01003363;AGCD01003364;AGCD01003365;AGCD01003366;AGCD01003367;AGCD01003368;GBDI01238697;XM_005374032;XM_005374033 XP_005374089;XP_005374090 MODEL 8729836 protein-coding LOC102021959 major allergen I polypeptide chain 1-like NW_004955468 4185332 4186669 + 102021959 AGCD01051895;XM_013522295 XP_013377749 MODEL 8781061 protein-coding Qdpr quinoid dihydropteridine reductase ENCODES a protein that exhibits 6,7-dihydropteridine reductase activity (ortholog); identical protein binding (ortholog); NADH binding (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); liver development (ortholog); response to aluminum ion (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; dopamine biosynthetic pathway; epinephrine biosynthetic pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); BH4-deficient hyperphenylalaninemia C (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955480 6646088 6666866 + 102024227 AGCD01056687;GBBH01163988;GBDF01119216;XM_005402546 XP_005402603 MODEL 39132384 snrna U6 U6 spliceosomal RNA 8737297 protein-coding LOC102012822 sulfotransferase family cytosolic 2B member 1-like NW_004955804 1914 12609 + 102012822 AGCD01078378;AGCD01078379;GBCE01003625;XM_005415116 XP_005415173 MODEL 8702839 protein-coding Tbl2 transducin beta like 2 ENCODES a protein that exhibits phosphoprotein binding (ortholog); protein kinase binding (ortholog); translation initiation factor binding (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); cellular response to hypoxia (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955456 14128847 14134314 + 102027612 AGCD01046634;GBDF01044026;XM_005396782 XP_005396839 MODEL 153211022 protein-coding TUBA1B tubulin alpha 1b 9052013 pseudo LOC102010394 heterogeneous nuclear ribonucleoprotein K pseudogene NW_004955429 5495670 5504446 - 102010394 AGCD01028516;AGCD01028517 MODEL 9025858 protein-coding Lrrc3b leucine rich repeat containing 3B ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog) NW_004955430 18351763 18440120 + 102015654 AGCD01029690;AGCD01029691;AGCD01029692;GBDJ01392673;XM_005387498 XP_005387555 MODEL 39133443 snrna U4 U4 spliceosomal RNA 8933836 protein-coding Gsdmc gasdermin C ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN intestinal epithelial cell development (ortholog); pyroptotic inflammatory response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955461 4594967 4610037 + 102029720 AGCD01048870;XM_013521296;XM_013521297 XP_013376750;XP_013376751 MODEL 8923953 protein-coding Gins1 GINS complex subunit 1 INVOLVED IN DNA replication (ortholog); inner cell mass cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN CMG complex (ortholog); cytoplasm (ortholog); GINS complex (ortholog) NW_004955415 31341021 31363069 + 102012533 AGCD01016674;GBDF01124614;XM_005380994 XP_005381051 MODEL 8768235 protein-coding LOC102005121 cysteine-rich secretory protein 3-like NW_004955411 8128236 8151585 + 102005121 AGCD01011719;GBBH01140337;XM_005377667 XP_005377724 MODEL 39133004 snrna U6 U6 spliceosomal RNA 8906834 protein-coding Suco SUN domain containing ossification factor INVOLVED IN positive regulation of collagen biosynthetic process (ortholog); positive regulation of osteoblast differentiation (ortholog); regulation of bone remodeling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN membrane (ortholog); rough endoplasmic reticulum (ortholog) NW_004955406 12985339 13064863 + 102030271 AGCD01005930;AGCD01005931;AGCD01005932;GBDF01048447;XM_005374860;XM_005374862;XM_013520715;XM_013520725 XP_005374917;XP_005374919;XP_013376169;XP_013376179 MODEL 8771102 protein-coding Dtd2 D-aminoacyl-tRNA deacylase 2 ENCODES a protein that exhibits Ala-tRNA(Thr) deacylase activity (ortholog); D-aminoacyl-tRNA deacylase activity (ortholog); D-tyrosyl-tRNA(Tyr) deacylase activity (ortholog); INVOLVED IN aminoacyl-tRNA metabolism involved in translational fidelity (ortholog); ASSOCIATED WITH sarcoma (ortholog) NW_004955409 29151779 29160734 + 102011182 AGCD01010253;GBBH01016347;XM_005376956 XP_005377013 MODEL 9048358 protein-coding LOC102003687 vomeronasal type-2 receptor 116-like NW_004955524 1903056 1933183 + 102003687 AGCD01068783;AGCD01068784;AGCD01068785;AGCD01068786;AGCD01068787;GBDF01097477;XM_013507191 XP_013362645 MODEL 9033716 pseudo LOC102007704 soluble lamin-associated protein of 75 kDa pseudogene NW_004955441 15516264 15525569 - 102007704 AGCD01037250 MODEL 9065365 protein-coding Lhcgr luteinizing hormone/choriogonadotropin receptor ENCODES a protein that exhibits ATPase binding (ortholog); choriogonadotropin hormone binding (ortholog); choriogonadotropin hormone receptor activity (ortholog); INVOLVED IN activation of adenylate cyclase activity (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; luteinizing hormone signaling pathway; peptide and protein hormone signaling pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); breast cancer (ortholog); disorder of sexual development (ortholog); FOUND IN endosome (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955441 15205883 15263617 - 102023399 AGCD01037244;AGCD01037245;AGCD01037246;GBDJ01116217;XM_005391008;XM_013517564;XM_013517565;XM_013517566;XM_013517567 XP_005391065;XP_013373018;XP_013373019;XP_013373020;XP_013373021 MODEL 8754321 protein-coding Shpk sedoheptulokinase ENCODES a protein that exhibits sedoheptulokinase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); cellular response to interleukin-13 (ortholog); cellular response to interleukin-4 (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); SEDOHEPTULOKINASE DEFICIENCY (ortholog); FOUND IN cytoplasm (ortholog) NW_004955467 13169072 13209585 + 102020549 AGCD01051667;AGCD01051668;GBCQ01123966;XM_005399716;XM_005399717 XP_005399773;XP_005399774 MODEL 8743427 pseudo LOC102004419 acyl-protein thioesterase 1 pseudogene NW_004955535 3723222 3723807 + 102004419 AGCD01070706;XM_005410498 MODEL 730469531 scarna SCARNA17 small Cajal body-specific RNA 17 9034251 protein-coding Ikzf1 IKAROS family zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); B cell differentiation (ortholog); erythrocyte differentiation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); Addison's disease (ortholog); anal canal squamous cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); pericentric heterochromatin (ortholog) NW_004955456 3617988 3721791 - 102029707 AGCD01046278;AGCD01046279;AGCD01046280;GBDJ01115764;XM_005396609;XM_005396610;XM_005396617;XM_013520610;XM_013520611;XM_013520612;XM_013520613;XM_013520614;XM_013520615;XM_013520616;XM_013520617;XM_013520618 XP_005396666;XP_005396667;XP_005396674;XP_013376064;XP_013376065;XP_013376066;XP_013376067;XP_013376068;XP_013376069;XP_013376070;XP_013376071;XP_013376072 MODEL 8933853 protein-coding Smg1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); telomeric repeat DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955442 2553135 2651772 - 102003069 AGCD01037468;AGCD01037469;AGCD01037470;GBBH01186712;XM_005391088;XM_005391089;XM_005391090;XM_013517825 XP_005391145;XP_005391146;XP_005391147;XP_013373279 MODEL 8976934 protein-coding Ksr1 kinase suppressor of ras 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN positive regulation of MAPK cascade (ortholog); Ras protein signal transduction (ortholog); regulation of cell population proliferation (ortholog); PARTICIPATES IN ceramide signaling pathway; platelet-derived growth factor signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast adenocarcinoma (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955481 5768166 5913557 - 102013414 AGCD01057003;AGCD01057004;AGCD01057005;GBCE01188097;XM_005402782;XM_005402783;XM_005402784;XM_005402785;XM_005402786;XM_005402787;XM_005402788;XM_005402789 XP_005402839;XP_005402840;XP_005402841;XP_005402842;XP_005402843;XP_005402844;XP_005402845;XP_005402846 MODEL 8995179 protein-coding Ryr3 ryanodine receptor 3 ENCODES a protein that exhibits calcium-induced calcium release activity (ortholog); intracellularly gated calcium channel activity (ortholog); ryanodine-sensitive calcium-release channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); intracellular calcium ion homeostasis (ortholog); negative regulation of cytosolic calcium ion concentration (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); brain disease (ortholog); cerebral palsy (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); junctional membrane complex (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955416 712506 1260111 - 102024222 AGCD01016819;AGCD01016820;AGCD01016821;AGCD01016822;AGCD01016823;AGCD01016824;AGCD01016825;AGCD01016826;AGCD01016827;AGCD01016828;AGCD01016829;AGCD01016830;AGCD01016831;GBDJ01280043;XM_005381167 XP_005381224 MODEL 9055678 protein-coding Tsfm Ts translation elongation factor, mitochondrial INVOLVED IN mitochondrial translational elongation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); combined oxidative phosphorylation deficiency 3 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955458 5489551 5498572 + 102012162 AGCD01047494;AGCD01047495;GBDI01117542;XM_005397417;XM_005397418 XP_005397474;XP_005397475 MODEL 8986972 ncrna LOC102013993 uncharacterized LOC102013993 NW_004955403 11680087 11685223 - 102013993 AGCD01001958;GBBH01086932;XR_259171 MODEL 8799462 protein-coding Wrnip1 WRN helicase interacting protein 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); INVOLVED IN DNA synthesis involved in DNA repair (ortholog); regulation of DNA-templated DNA replication initiation (ortholog); ASSOCIATED WITH lung cancer (ortholog); melanoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955465 10574601 10594570 - 102026302 AGCD01050510;AGCD01050511;GBBH01090406;GBCQ01093710;XM_005398930 XP_005398987 MODEL 8899261 protein-coding Slc61a1 solute carrier family 61 member 1 ENCODES a protein that exhibits molybdate ion transmembrane transporter activity (ortholog); INVOLVED IN molybdate ion transport (ortholog); response to food (ortholog); response to starvation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955458 519566 521778 + 102016671 AGCD01047131;GBBH01228192;XM_005397163 XP_005397220 MODEL 9020760 protein-coding Tuba4a tubulin alpha 4a ENCODES a protein that exhibits enzyme binding (ortholog); protein kinase binding (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 10 (ortholog); amyotrophic lateral sclerosis type 22 (ortholog); FOUND IN cilium (ortholog); cytoskeleton (ortholog); microtubule (ortholog) NW_004955453 14177043 14180814 + 102012828 AGCD01044859;GBDF01046528;XM_005395550 XP_005395607 MODEL 8944008 protein-coding Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 ENCODES a protein that exhibits ER lumen protein retrieval receptor activity (ortholog); INVOLVED IN retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); T cell apoptotic process (ortholog); T cell differentiation (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cis-Golgi network (ortholog); COPI-coated vesicle membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955559 2080085 2087579 + 102011057 AGCD01073691;GBDJ01021309;XM_005412955 XP_005413012 MODEL 9025335 protein-coding Slc16a4 solute carrier family 16 member 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955435 13865956 13892687 - 102017378 AGCD01033212;GBCB01050157;XM_005388918;XM_005388919;XM_005388920;XM_013516513;XM_013516515;XM_013516516;XM_013516517 XP_005388975;XP_005388976;XP_005388977;XP_013371967;XP_013371969;XP_013371970;XP_013371971 MODEL 8734398 protein-coding Etnk2 ethanolamine kinase 2 ENCODES a protein that exhibits choline kinase activity (ortholog); ethanolamine kinase activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); multicellular organism growth (ortholog); phosphatidylethanolamine biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955406 39996850 40013753 - 102017842 AGCD01006650;GBDK01051887;XM_005375285 XP_005375342 MODEL 39133098 snrna U6 U6 spliceosomal RNA 8913814 protein-coding LOC102003358 zinc finger protein 709-like NW_004955499 342903 348346 + 102003358 AGCD01063222;GBDI01384946;XM_013505570 XP_013361024 MODEL 9065350 protein-coding LOC102022989 uncharacterized LOC102022989 NW_004955600 495492 516773 + 102022989 AGCD01076726;AGCD01076727;AGCD01076728;GBDF01249628;GBDF01249630;XM_005414808 XP_005414865 MODEL 8959500 protein-coding Gars1 glycyl-tRNA synthetase 1 ENCODES a protein that exhibits ATP:ATP adenylyltransferase activity (ortholog); bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (ortholog); glycine-tRNA ligase activity (ortholog); INVOLVED IN diadenosine tetraphosphate biosynthetic process (ortholog); glycyl-tRNA aminoacylation (ortholog); tRNA aminoacylation for protein translation (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyloidosis (ortholog); asthma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955410 31778654 31819287 + 102021320 AGCD01011332;AGCD01011333;GBBH01062204;GBDJ01157897;XM_005377501 XP_005377558 MODEL 8904038 protein-coding Tex101 testis expressed 101 INVOLVED IN basophil activation (ortholog); binding of sperm to zona pellucida (ortholog); fertilization (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog); cell surface (ortholog) NW_004955555 1136499 1140802 + 102014398 AGCD01073058;GBDF01052755;XM_005412435;XM_013508734 XP_005412492;XP_013364188 MODEL 8760503 protein-coding LOC102009253 keratin-associated protein 20-2-like NW_004955407 30214295 30214462 + 102009253 AGCD01007628;XM_005375647 XP_005375704 MODEL 39132385 snrna U6 U6 spliceosomal RNA 10184175 protein-coding LOC106147280 protein canopy homolog 3-like NW_004955408 749219 749929 - 106147280 AGCD01007929;XM_013507886 XP_013363340 MODEL 8758056 protein-coding Tnfrsf11b TNF receptor superfamily member 11b ENCODES a protein that exhibits heparan sulfate binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); negative regulation of bone resorption (ortholog); negative regulation of odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH Alveolar Bone Loss (ortholog); aortic valve stenosis (ortholog); bipolar disorder (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955417 24804708 24831338 - 102005255 AGCD01018467;GBDJ01116459;XM_005381906 XP_005381963 MODEL 8710020 ncrna LOC102017826 uncharacterized LOC102017826 NW_004955447 224885 228738 - 102017826 AGCD01040449;GBDI01039983;XR_262402 MODEL 8819364 protein-coding Lrrc3c leucine rich repeat containing 3C ASSOCIATED WITH allergic asthma (ortholog) NW_004955451 14644464 14647078 + 102005877 AGCD01043564;GBDK01099220;XM_005394332;XM_005394333;XM_005394334;XM_005394335 XP_005394389;XP_005394390;XP_005394391;XP_005394392 MODEL 8999601 protein-coding LOC102015899 kallikrein-4-like NW_004955559 349640 357295 - 102015899 AGCD01073578;XM_005412969 XP_005413026 MODEL 8941795 protein-coding LOC102019006 chromosome unknown open reading frame, human C20orf96 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955597 155659 183450 - 102019006 AGCD01076545;AGCD01076546;GBDI01006441;XM_005414713;XM_005414714;XM_013510029;XM_013510030;XM_013510031;XM_013510032 XP_005414770;XP_005414771;XP_013365483;XP_013365484;XP_013365485;XP_013365486 MODEL 8876902 protein-coding Gins2 GINS complex subunit 2 INVOLVED IN DNA replication (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); FOUND IN CMG complex (ortholog); GINS complex (ortholog); nucleus (ortholog) NW_004955541 809079 816807 - 102019106 AGCD01071360;AGCD01071361;GBDF01052450;XM_005410979 XP_005411036 MODEL 8796350 pseudo LOC102018639 polycomb complex protein BMI-1-like NW_004955529 1100230 1104601 - 102018639 AGCD01069673 MODEL 8872948 protein-coding S100a1 S100 calcium binding protein A1 ENCODES a protein that exhibits ATPase binding (ortholog); calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN ATP metabolic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of sprouting angiogenesis (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); intracranial vasospasm (ortholog); Myocardial Ischemia (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955545 276868 281015 + 102016098 AGCD01071781;GBDI01063284;XM_005411426 XP_005411483 MODEL 8740478 protein-coding Npy1r neuropeptide Y receptor Y1 ENCODES a protein that exhibits neuropeptide receptor activity (ortholog); neuropeptide Y receptor activity (ortholog); pancreatic polypeptide receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); feeding behavior (ortholog); glucose metabolic process (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); neuronal dense core vesicle (ortholog) NW_004955403 41681834 41693094 + 102015911 AGCD01002731;GBDJ01095020;XM_005373596;XM_013513563;XM_013513566 XP_005373653;XP_013369017;XP_013369020 MODEL 8765516 pseudo LOC102007705 tumor suppressor p53-binding protein 1-like NW_004955548 2402607 2409082 + 102007705 AGCD01072395 MODEL 9050425 ncrna LOC102009632 uncharacterized LOC102009632 NW_004955427 7305557 7312900 - 102009632 AGCD01027048;GBDF01114554;XR_261237 MODEL 8941077 protein-coding LOC102021961 olfactory receptor 51A4-like NW_004955414 20597523 20619093 - 102021961 AGCD01015382;AGCD01015383;AGCD01015384;XM_005380063 XP_005380120 MODEL 39132722 snrna U6 U6 spliceosomal RNA 8853293 protein-coding Qki QKI, KH domain containing RNA binding ENCODES a protein that exhibits internal N(7)-methylguanine-containing RNA reader activity (ortholog); miRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); axon ensheathment (ortholog); intracellular mRNA localization (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); demyelinating disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955439 17925205 18079727 - 102005844 AGCD01036045;AGCD01036046;AGCD01036047;AGCD01036048;AGCD01036049;GBDJ01179084;XM_013517307 XP_013372761 MODEL 8830044 protein-coding Fgf16 fibroblast growth factor 16 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); positive regulation of brown fat cell proliferation (ortholog); positive regulation of endothelial cell chemotaxis to fibroblast growth factor (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); disease of cellular proliferation (ortholog); syndactyly type 8 (ortholog) NW_004955557 906361 915590 + 102018534 AGCD01073267;GBCB01017510;XM_005412621 XP_005412678 MODEL 8705121 protein-coding LOC102012823 inositol-3-phosphate synthase 1-like NW_004958180 30 610 + 102012823 AGCD01081576;GBBH01061916;XM_005415238 XP_005415295 MODEL 730469384 scarna SCARNA18 small Cajal body-specific RNA 18 8986917 protein-coding Tbl3 transducin beta like 3 INVOLVED IN ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) NW_004955442 15290759 15297070 - 102011364 AGCD01037864;GBDJ01236215;XM_005391486;XM_005391487 XP_005391543;XP_005391544 MODEL 9000120 pseudo LOC102010397 forkhead box protein H1 pseudogene NW_004955431 1005823 1006729 - 102010397 AGCD01029888 MODEL 8722924 ncrna LOC102021242 uncharacterized LOC102021242 NW_004955419 7042095 7105331 - 102021242 AGCD01019869;AGCD01019870;AGCD01019871;AGCD01019872;AGCD01019873;GBDI01189022;XR_001233597;XR_260612 MODEL 9030889 protein-coding Shprh SNF2 histone linker PHD RING helicase ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); protein polyubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955436 14698210 14779231 + 102028463 AGCD01033875;AGCD01033876;GBDF01251664;XM_005389229 XP_005389286 MODEL 8770468 protein-coding Dlg1 discs large MAGUK scaffold protein 1 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); kinase binding (ortholog); kinesin binding (ortholog); INVOLVED IN actin filament organization (ortholog); amyloid precursor protein metabolic process (ortholog); astral microtubule organization (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cervix uteri carcinoma in situ (ortholog); FOUND IN anchoring junction (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955420 13068289 13273805 - 102018402 AGCD01020914;AGCD01020915;AGCD01020916;AGCD01020917;AGCD01020918;AGCD01020919;GBCB01057993;XM_005383157;XM_005383158;XM_005383159;XM_005383163;XM_005383165;XM_005383166;XM_005383167;XM_013513450;XM_013513452;XM_013513453 XP_005383214;XP_005383215;XP_005383216;XP_005383220;XP_005383222;XP_005383223;XP_005383224;XP_013368904;XP_013368906;XP_013368907 MODEL 8710393 protein-coding LOC102005126 olfactory receptor 149-like NW_004955412 25061204 25062136 + 102005126 AGCD01013133;XM_005378414 XP_005378471 MODEL 8787326 protein-coding LOC102025135 epithelial chloride channel protein-like NW_004955423 7433747 7456786 - 102025135 AGCD01023601;AGCD01023602;AGCD01023603;GBDF01286325;XM_005385357 XP_005385414 MODEL 8856160 pseudo LOC102012457 charged multivesicular body protein 5-like NW_004955509 3240394 3241053 + 102012457 AGCD01066019 MODEL 9023126 protein-coding Smg5 SMG5 nonsense mediated mRNA decay factor ENCODES a protein that exhibits histone deacetylase binding (ortholog); protein phosphatase 2A binding (ortholog); telomerase RNA binding (ortholog); INVOLVED IN regulation of dephosphorylation (ortholog); regulation of telomere maintenance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); nonsense-mediated decay complex (ortholog) NW_004955545 2386877 2418418 - 102024615 AGCD01071898;AGCD01071899;GBDI01125303;XM_005411667;XM_013508269 XP_005411724;XP_013363723 MODEL 8807164 protein-coding Gsdmd gasdermin D ENCODES a protein that exhibits cardiolipin binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); pore complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN canonical inflammasome complex (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955454 2265759 2270569 + 102003514 AGCD01045015;GBCE01095709;XM_005395773;XM_005395774 XP_005395830;XP_005395831 MODEL 9044566 protein-coding Blm BLM RecQ like helicase ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); 8-hydroxy-2'-deoxyguanosine DNA binding (ortholog); ATP binding (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); cellular response to camptothecin (ortholog); cellular response to hydroxyurea (ortholog); PARTICIPATES IN DNA replication pathway; homologous recombination pathway of double-strand break repair; ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); B-cell lymphoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); lateral element (ortholog) NW_004955416 14814753 14899865 + 102015513 AGCD01017283;AGCD01017284;AGCD01017285;AGCD01017286;GBDF01222241;XM_005381505;XM_005381506;XM_013512656;XM_013512657 XP_005381562;XP_005381563;XP_013368110;XP_013368111 MODEL 39133006 snrna U6 U6 spliceosomal RNA 8785126 protein-coding CUNH3orf70 chromosome unknown C3orf70 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955420 22426369 22493624 + 102014570 AGCD01021199;AGCD01021200;AGCD01021201;GBBH01126853;GBDI01223181;XM_005383303 XP_005383360 MODEL 9005788 protein-coding Tsg101 tumor susceptibility 101 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); protein homodimerization activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell differentiation (ortholog); endosome to lysosome transport (ortholog); exosomal secretion (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH breast cancer (ortholog); cervix carcinoma (ortholog); endometrial adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955414 33154812 33193769 - 102023023 AGCD01015799;AGCD01015800;GBCE01077499;XM_005380422;XM_005380423 XP_005380479;XP_005380480 MODEL 9041222 protein-coding Wsb1 WD repeat and SOCS box containing 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein aggregate center assembly (ortholog); protein K27-linked ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); Lewy body (ortholog) NW_004955481 6014218 6034850 - 102015405 AGCD01057006;GBDJ01022597;XM_005402791;XM_013503496;XM_013503497 XP_005402848;XP_013358950;XP_013358951 MODEL 8964944 protein-coding LOC102015901 vomeronasal type-1 receptor 2-like NW_004955569 988836 989759 - 102015901 AGCD01074631;XM_005413516 XP_005413573 MODEL 8971880 protein-coding Tacr1 tachykinin receptor 1 ENCODES a protein that exhibits substance P receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); aggressive behavior (ortholog); angiotensin-mediated drinking behavior (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); acute necrotizing pancreatitis (ortholog); alcohol use disorder (ortholog); FOUND IN cell body (ortholog); cell periphery (ortholog); cell surface (ortholog) NW_004955424 10614340 10761872 + 102018411 AGCD01024522;AGCD01024523;AGCD01024524;AGCD01024525;AGCD01024526;GBBH01188694;XM_005385472 XP_005385529 MODEL 8883687 protein-coding Tuba8 tubulin alpha 8 INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal dominant isolated macrothrombocytopenia 2 (ortholog); CEDNIK syndrome (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); microtubule cytoskeleton (ortholog) NW_004955454 6129821 6148645 + 102006872 AGCD01045219;AGCD01045220;GBCE01040780;XM_005395986 XP_005396043 MODEL 8967469 protein-coding Dthd1 death domain containing 1 ASSOCIATED WITH fundus dystrophy (ortholog); Norum disease (ortholog); optic atrophy (ortholog) NW_004955443 10444916 10501215 - 102012032 AGCD01038377;AGCD01038378;GBDI01000525;XM_005392015 XP_005392072 MODEL 9007454 protein-coding Etnppl ethanolamine-phosphate phospho-lyase ENCODES a protein that exhibits ethanolamine-phosphate phospho-lyase activity (ortholog); INVOLVED IN cellular response to glucocorticoid stimulus (ortholog); ceramide phosphoethanolamine catabolic process (ortholog); gene expression (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog) NW_004955496 1274929 1292802 + 102028103 AGCD01062252;GBDF01054944;XM_005406194 XP_005406251 MODEL 39133445 snrna U4 U4 spliceosomal RNA 8974923 protein-coding Wsb2 WD repeat and SOCS box containing 2 ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); Luo-Agrawal neurodevelopmental syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955455 13313072 13324496 + 102020418 AGCD01046069;GBBH01140149;GBDI01126390;XM_005396538 XP_005396595 MODEL 8796425 protein-coding Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ENCODES a protein that exhibits phosphoribosylamine-glycine ligase activity (ortholog); phosphoribosylformylglycinamidine cyclo-ligase activity (ortholog); phosphoribosylglycinamide formyltransferase activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); 'de novo' IMP biosynthetic process (ortholog); 'de novo' XMP biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog) NW_004955407 32944638 32975142 - 102020757 AGCD01007689;AGCD01007690;AGCD01007691;AGCD01007692;GBBH01115642;XM_005375682;XM_005375683;XM_005375684;XM_005375685 XP_005375739;XP_005375740;XP_005375741;XP_005375742 MODEL 8811334 protein-coding LOC102013994 olfactory receptor 2L3-like NW_004955619 182473 183411 - 102013994 AGCD01077343;XM_005415006 XP_005415063 MODEL 9053678 protein-coding Ksr2 kinase suppressor of ras 2 ENCODES a protein that exhibits MAP kinase scaffold activity (ortholog); mitogen-activated protein kinase kinase binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); positive regulation of cold-induced thermogenesis (ortholog); positive regulation of MAPK cascade (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955455 13375306 13777681 + 102021310 AGCD01046071;AGCD01046072;AGCD01046073;AGCD01046074;GBDF01067170;XM_013520300;XM_013520301 XP_013375754;XP_013375755 MODEL 8790459 protein-coding Tnfrsf12a TNF receptor superfamily member 12A INVOLVED IN cell adhesion (ortholog); extrinsic apoptotic signaling pathway (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Experimental Liver Cirrhosis (ortholog); myocardial infarction (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); ruffle (ortholog) NW_004955442 14320159 14322146 - 102007817 AGCD01037810;GBCE01031231;XM_005391378 XP_005391435 MODEL 8834822 protein-coding Slc16a5 solute carrier family 16 member 5 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); lymphoma (ortholog) NW_004955553 1969371 1996170 + 102019441 AGCD01072910;AGCD01072911;GBBH01219043;XM_013508643;XM_013508644;XM_013508645;XM_013508646;XM_013508647 XP_013364097;XP_013364098;XP_013364099;XP_013364100;XP_013364101 MODEL 8739138 protein-coding Kdelr2 KDEL endoplasmic reticulum protein retention receptor 2 ENCODES a protein that exhibits ER lumen protein retrieval receptor activity (ortholog); INVOLVED IN maintenance of protein localization in endoplasmic reticulum (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); COPI-coated vesicle membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955460 13202400 13221319 + 102020774 AGCD01048674;GBCQ01041850;XM_005397890;XM_013521168 XP_005397947;XP_013376622 MODEL 39133099 snrna U6 U6 spliceosomal RNA 8742745 ncrna LOC102004424 uncharacterized LOC102004424 NW_004955438 15400685 15404077 + 102004424 AGCD01035366;GBDF01187415;XR_261938 MODEL 8713647 pseudo LOC102022991 opioid growth factor receptor-like protein 1 pseudogene NW_004955897 13719 14864 - 102022991 AGCD01078610 MODEL 9028853 protein-coding S100a10 S100 calcium binding protein A10 ENCODES a protein that exhibits lipid binding (ortholog); protein homodimerization activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN membrane raft assembly (ortholog); mRNA transcription by RNA polymerase II (ortholog); positive regulation of focal adhesion assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); depressive disorder (ortholog); FOUND IN AnxA2-p11 complex (ortholog); cell surface (ortholog); membrane raft (ortholog) NW_004955589 435798 446361 + 102010849 AGCD01076171;GBCQ01009914;XM_005414536 XP_005414593 MODEL 8872928 protein-coding Npy2r neuropeptide Y receptor Y2 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); neuropeptide receptor activity (ortholog); neuropeptide Y receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); behavioral fear response (ortholog); behavioral response to nicotine (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); cilium (ortholog); glutamatergic synapse (ortholog) NW_004955471 11796278 11804114 - 102015833 AGCD01053260;AGCD01053261;GBCQ01014549;XM_005400953;XM_005400954 XP_005401010;XP_005401011 MODEL 9020990 protein-coding Ikzf2 IKAROS family zinc finger 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cochlear outer hair cell electromotile response (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN nucleus (ortholog) NW_004955457 2608892 2763036 + 102023666 AGCD01046748;AGCD01046749;GBBH01017109;XM_005396928;XM_005396929;XM_005396930;XM_005396932;XM_013520762;XM_013520763;XM_013520764;XM_013520765;XM_013520766;XM_013520767;XM_013520768;XM_013520769;XM_013520770 XP_005396985;XP_005396986;XP_005396987;XP_005396989;XP_013376216;XP_013376217;XP_013376218;XP_013376219;XP_013376220;XP_013376221;XP_013376222;XP_013376223;XP_013376224 MODEL 8883812 ncrna LOC102009257 uncharacterized LOC102009257 NW_004955460 11538025 11540811 + 102009257 AGCD01048633;GBDF01077791;XR_263059 MODEL 39132388 snrna U6 U6 spliceosomal RNA 8763919 pseudo LOC102017827 dnaJ homolog subfamily A member 1 pseudogene NW_004955448 18477355 18478527 + 102017827 AGCD01041746 MODEL 8762189 protein-coding LOC102012824 cytochrome c oxidase subunit 6B1-like NW_004955452 216986 217314 - 102012824 AGCD01043804;XM_005394661 XP_005394718 MODEL 8730164 protein-coding Slc66a1 solute carrier family 66 member 1 ENCODES a protein that exhibits basic amino acid transmembrane transporter activity (ortholog); L-arginine transmembrane transporter activity (ortholog); L-histidine transmembrane transporter activity (ortholog); INVOLVED IN intracellular amino acid homeostasis (ortholog); L-arginine transmembrane transport (ortholog); L-histidine transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cystinosis (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955452 17459 22259 + 102011076 AGCD01043796;GBDF01154072;XM_013519452 XP_013374906 MODEL 8847425 protein-coding Tbp TATA-box binding protein ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN mRNA transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); PARTICIPATES IN cisplatin drug pathway; RNA polymerase I transcription pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); euchromatin (ortholog) NW_004955411 3268147 3285567 - 102015934 AGCD01011545;GBDK01319233;XM_005377620;XM_005377621;XM_005377622;XM_005377624;XM_013510867 XP_005377677;XP_005377678;XP_005377679;XP_005377681;XP_013366321 MODEL 9008229 protein-coding Lrrc4 leucine rich repeat containing 4 INVOLVED IN excitatory synapse assembly (ortholog); modulation of chemical synaptic transmission (ortholog); postsynaptic density protein 95 clustering (ortholog); FOUND IN dendritic spine (ortholog); excitatory synapse (ortholog); glutamatergic synapse (ortholog) NW_004955479 9012253 9066940 - 102023804 AGCD01056456;GBDF01210045;XM_005402363;XM_005402364;XM_005402365;XM_013503285;XR_001230881;XR_263738 XP_005402420;XP_005402421;XP_005402422;XP_013358739 MODEL 8930452 pseudo LOC102003359 transmembrane protein 254 pseudogene NW_004955424 24750779 24751166 - 102003359 AGCD01025032 MODEL 8867797 protein-coding LOC102003691 vomeronasal type-2 receptor 116-like NW_004955532 145761 208308 + 102003691 AGCD01070101;AGCD01070102;AGCD01070103;AGCD01070104;AGCD01070105;AGCD01070106;AGCD01070107;AGCD01070108;AGCD01070109;AGCD01070110;XM_013507569 XP_013363023 MODEL 8821885 protein-coding Gins3 GINS complex subunit 3 INVOLVED IN cellular senescence (ortholog); DNA replication (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Meier-Gorlin syndrome 9 (ortholog); FOUND IN CMG complex (ortholog); GINS complex (ortholog); nucleoplasm (ortholog) NW_004955433 15843025 15864942 + 102012353 AGCD01031770;AGCD01031771;AGCD01031772;GBDJ01376801;XM_005388439 XP_005388496 MODEL 8906016 protein-coding LOC102018640 melanoma-associated antigen B1-like NW_004955531 724330 725875 + 102018640 AGCD01070007;XM_005410133 XP_005410190 MODEL 8819417 protein-coding Smg6 SMG6 nonsense mediated mRNA decay factor ENCODES a protein that exhibits DNA polymerase binding (ortholog); ribonucleoprotein complex binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of telomere capping (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); regulation of telomere maintenance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); corpus callosum agenesis-abnormal genitalia syndrome (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); exon-exon junction complex (ortholog) NW_004955481 940041 1177998 + 102008849 AGCD01056818;AGCD01056819;AGCD01056820;AGCD01056821;AGCD01056822;AGCD01056823;AGCD01056824;AGCD01056825;AGCD01056826;GBCE01099102;XM_005402585;XM_005402586;XM_005402587;XM_013503361;XM_013503362 XP_005402642;XP_005402643;XP_005402644;XP_013358815;XP_013358816 MODEL 8853225 ncrna LOC102007708 uncharacterized LOC102007708 NW_004955443 5130686 5141731 - 102007708 AGCD01038232;GBCB01015177;XR_262176 MODEL 8925949 protein-coding Blmh bleomycin hydrolase ENCODES a protein that exhibits aminopeptidase activity (ortholog); identical protein binding (ortholog); peptidase activity (ortholog); INVOLVED IN response to toxic substance (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955481 3031283 3078678 + 102003869 AGCD01056891;AGCD01056892;AGCD01056893;GBDF01058051;XM_005402657;XM_005402658;XM_005402659 XP_005402714;XP_005402715;XP_005402716 MODEL 9058248 protein-coding Slc16a6 solute carrier family 16 member 6 ASSOCIATED WITH endometriosis (ortholog); FOUND IN basolateral plasma membrane (ortholog) NW_004955478 4449362 4467866 + 102027069 AGCD01055851;GBBH01055718;XM_005402118;XM_005402119 XP_005402175;XP_005402176 MODEL 8944278 protein-coding Tex11 testis expressed 11 INVOLVED IN chiasma assembly (ortholog); fertilization (ortholog); male gonad development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN central element (ortholog); chromosome (ortholog); condensed nuclear chromosome (ortholog) NW_004955475 10057708 10432087 - 102027742 AGCD01055082;AGCD01055083;AGCD01055084;AGCD01055085;AGCD01055086;AGCD01055087;AGCD01055088;AGCD01055089;AGCD01055090;AGCD01055091;AGCD01055092;AGCD01055093;AGCD01055094;AGCD01055095;XM_005401706 XP_005401763 MODEL 8959534 protein-coding Tacr2 tachykinin receptor 2 ENCODES a protein that exhibits substance K receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); intestine smooth muscle contraction (ortholog); negative regulation of luteinizing hormone secretion (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); asthma (ortholog); bronchial disease (ortholog); FOUND IN plasma membrane (ortholog); sperm flagellum (ortholog); sperm head (ortholog) NW_004955437 21719246 21731963 + 102023195 AGCD01034919;AGCD01034920;GBDK01300429;XM_005390085;XM_005390086 XP_005390142;XP_005390143 MODEL 9049316 protein-coding Tubb tubulin beta class I ENCODES a protein that exhibits GTPase activating protein binding (ortholog); MHC class I protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN microtubule-based process (ortholog); odontoblast differentiation (ortholog); regulation of synapse organization (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); astigmatism (ortholog); FOUND IN cell body (ortholog); ciliary tip (ortholog); cilium (ortholog) NW_004955583 704811 715742 + 102018665 AGCD01075853;AGCD01075854;AGCD01075855;GBCE01002225;GBDJ01017686;XM_005414317 XP_005414374 MODEL 39133446 snrna U4 U4 spliceosomal RNA 730469479 scarna SCARNA18 small Cajal body-specific RNA 18 9023745 pseudo LOC102022996 calreticulin pseudogene NW_004955404 25701933 25702878 + 102022996 AGCD01003861 MODEL 9067650 protein-coding LOC102020138 uncharacterized LOC102020138 NW_004955499 8106996 8114025 + 102020138 AGCD01063616;GBDF01144920;XM_005406547 XP_005406604 MODEL 8927693 pseudo LOC102021245 rab proteins geranylgeranyltransferase component A 2-like NW_004955419 5165693 5166738 - 102021245 AGCD01019787 MODEL 8790032 protein-coding Suds3 SIN3A corepressor complex component SDS3 ENCODES a protein that exhibits enzyme binding (ortholog); histone deacetylase activity (ortholog); histone deacetylase binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); chromatin remodeling (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog); Sin3-type complex (ortholog) NW_004955455 12981899 13017194 - 102018467 AGCD01046056;GBDF01128270;XM_005396532 XP_005396589 MODEL 8708820 protein-coding LOC102025137 melanoma-associated antigen 10-like NW_004955498 4797137 4797895 + 102025137 AGCD01063020;GBDF01246816;XM_005406487 XP_005406544 MODEL 8937284 protein-coding Shq1 SHQ1, H/ACA ribonucleoprotein assembly factor INVOLVED IN positive regulation of TORC1 signaling (ortholog); protein-RNA complex assembly (ortholog); regulation of androgen receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955421 15358387 15455534 + 102027862 AGCD01021980;GBCE01080321;XM_005383768;XM_005383769 XP_005383825;XP_005383826 MODEL 8787656 pseudo LOC102005128 adenylate kinase 4, mitochondrial pseudogene NW_004955412 30505705 30506289 - 102005128 AGCD01013301 MODEL 10064458 protein-coding Gas1 growth arrest specific 1 ENCODES a protein that exhibits oxysterol binding (ortholog); protein carrier activity (ortholog); INVOLVED IN axon guidance (ortholog); camera-type eye development (ortholog); cell fate commitment (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH holoprosencephaly (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955432 727784 729096 + 106148912 AGCD01030575;GBCQ01125235;GBDJ01082864;XM_013516038 XP_013371492 MODEL 8787848 ncrna LOC102012458 uncharacterized LOC102012458 NW_004955429 17740928 17746251 - 102012458 AGCD01028865;GBDF01045489;XR_001234510 MODEL 8719330 protein-coding LOC102013995 disintegrin and metalloproteinase domain-containing protein 21 NW_004955656 37920 44620 - 102013995 AGCD01077846;GBDF01082523;XM_005415059 XP_005415116 MODEL 9057264 ncrna LOC102017828 uncharacterized LOC102017828 NW_004955402 45460545 45502507 - 102017828 AGCD01001136;AGCD01001137;AGCD01001138;AGCD01001139;AGCD01001140;GBDF01236164;XR_259092 MODEL 8954832 protein-coding Dlg2 discs large MAGUK scaffold protein 2 ENCODES a protein that exhibits kinase binding (ortholog); PDZ domain binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); cellular response to potassium ion (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN axon initial segment (ortholog); cell junction (ortholog); cytoplasm (ortholog) NW_004955414 7247248 9171664 + 102022378 AGCD01014951;AGCD01014952;AGCD01014953;AGCD01014954;AGCD01014955;AGCD01014956;AGCD01014957;AGCD01014958;AGCD01014959;AGCD01014960;AGCD01014961;AGCD01014962;AGCD01014963;AGCD01014964;AGCD01014965;AGCD01014966;AGCD01014967;AGCD01014968;AGCD01014969;AGCD01014970;AGCD01014971;AGCD01014972;AGCD01014973;AGCD01014974;AGCD01014975;AGCD01014976;AGCD01014977;AGCD01014978;AGCD01014979;AGCD01014980;AGCD01014981;AGCD01014982;AGCD01014983;AGCD01014984;AGCD01014985;AGCD01014986;AGCD01014987;AGCD01014988;AGCD01014989;AGCD01014990;AGCD01014991;AGCD01014992;AGCD01014993;AGCD01014994;AGCD01014995;AGCD01014996;AGCD01014997;AGCD01014998;AGCD01014999;AGCD01015000;AGCD01015001;AGCD01015002;AGCD01015003;AGCD01015004;AGCD01015005;AGCD01015006;AGCD01015007;AGCD01015008;AGCD01015009;AGCD01015010;GBDK01207539;XM_005379786;XM_005379787;XM_005379790;XM_013511774;XM_013511775;XM_013511776;XM_013511777;XM_013511778;XM_013511779;XM_013511780;XM_013511781;XM_013511782;XM_013511783;XM_013511784;XM_013511785;XM_013511786;XM_013511787;XM_013511788;XM_013511789;XM_013511790;XM_013511791 XP_005379843;XP_005379844;XP_005379847;XP_013367228;XP_013367229;XP_013367230;XP_013367231;XP_013367232;XP_013367233;XP_013367234;XP_013367235;XP_013367236;XP_013367237;XP_013367238;XP_013367239;XP_013367240;XP_013367241;XP_013367242;XP_013367243;XP_013367244;XP_013367245 MODEL 8714015 protein-coding LOC102009633 chromosome unknown open reading frame, human C17orf62 INVOLVED IN calcium ion transport (ortholog); gene expression (ortholog); innate immune response (ortholog); ASSOCIATED WITH autosomal recessive chronic granulomatous disease 5 (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955506 697091 702900 + 102009633 AGCD01065234;GBCQ01009071;XM_005407199;XM_005407201;XM_005407202;XM_013506085;XM_013506086 XP_005407256;XP_005407258;XP_005407259;XP_013361539;XP_013361540 MODEL 10358983 ncrna LOC106147281 uncharacterized LOC106147281 NW_004955538 3329028 3331973 + 106147281 AGCD01071160;GBCE01139530;XR_001232092 MODEL 8724552 pseudo LOC102004427 KATNB1-like protein 1 NW_004955553 1440942 1443862 - 102004427 AGCD01072882 MODEL 9002789 protein-coding Fgf17 fibroblast growth factor 17 ENCODES a protein that exhibits type 1 fibroblast growth factor receptor binding (ortholog); type 2 fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hypogonadotropic hypogonadism 20 with or without anosmia (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog) NW_004955403 45544114 45548659 + 102030262 AGCD01002820;GBDF01213823;XM_005373644;XM_005373645 XP_005373701;XP_005373702 MODEL 8974411 protein-coding Dtl denticleless E3 ubiquitin protein ligase adapter ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); positive regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) NW_004955406 5256057 5299573 - 102023869 AGCD01005718;GBDF01043531;XM_005374751;XM_013520188;XM_013520193 XP_005374808;XP_013375642;XP_013375647 MODEL 9019187 protein-coding Lhfpl1 LHFPL tetraspan subfamily member 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955490 3156323 3215925 + 102028761 AGCD01060160;AGCD01060161;GBCB01097424;XM_005404629;XM_005404630 XP_005404686;XP_005404687 MODEL 8791970 protein-coding Gins4 GINS complex subunit 4 INVOLVED IN DNA replication (ortholog); inner cell mass cell proliferation (ortholog); FOUND IN CMG complex (ortholog); cytoplasm (ortholog); GINS complex (ortholog) NW_004955536 1360811 1375691 - 102015047 AGCD01070756;GBDF01159836;XM_005410531;XM_013507727 XP_005410588;XP_013363181 MODEL 8852638 protein-coding Ets1 ETS proto-oncogene 1, transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); cell motility (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN altered p53 signaling pathway; hypoxia inducible factor pathway; interleukin-4 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); celiac disease (ortholog); coarctation of the aorta (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955412 29433730 29602389 - 102010567 AGCD01013279;AGCD01013280;AGCD01013281;AGCD01013282;AGCD01013283;GBCC01027243;XM_005378524;XM_005378525;XM_005378526;XM_005378527;XM_005378529;XM_013511111;XM_013511112;XM_013511113 XP_005378581;XP_005378582;XP_005378583;XP_005378584;XP_005378586;XP_013366565;XP_013366566;XP_013366567 MODEL 8751268 pseudo LOC102019011 40S ribosomal protein S17-like NW_004955403 42388219 42400367 - 102019011 AGCD01002751 MODEL 8750369 protein-coding S100a11 S100 calcium binding protein A11 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); protein homodimerization activity (ortholog); S100 protein binding (ortholog); INVOLVED IN positive regulation of smooth muscle cell migration (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955589 405544 409936 + 102010111 AGCD01076171;GBDF01162287;XM_005414534;XM_005414535;XM_013509959;XM_013509960 XP_005414591;XP_005414592;XP_013365413;XP_013365414 MODEL 39133457 snrna U4 U4 spliceosomal RNA 39133007 snrna U6 U6 spliceosomal RNA 8924879 protein-coding Tsga10 testis specific 10 ENCODES a protein that exhibits structural molecule activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); motile cilium (ortholog) NW_004955470 5376749 5471904 - 102008086 AGCD01052749;AGCD01052750;AGCD01052751;GBDI01255512;XM_005400731;XM_005400734;XM_013522795;XM_013522796;XM_013522797;XM_013522799;XM_013522800 XP_005400788;XP_005400791;XP_013378249;XP_013378250;XP_013378251;XP_013378253;XP_013378254 MODEL 9013423 ncrna LOC102015905 uncharacterized LOC102015905 NW_004955402 15836454 15841598 + 102015905 AGCD01000465;GBDF01025169;XR_259054 MODEL 39132723 snrna U6 U6 spliceosomal RNA 9054459 protein-coding LOC102021963 uncharacterized LOC102021963 NW_004955470 874205 883508 - 102021963 AGCD01052624;XM_005400823 XP_005400880 MODEL 8973596 protein-coding Tnfrsf13b TNF receptor superfamily member 13B ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); hematopoietic progenitor cell differentiation (ortholog); negative regulation of B cell proliferation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); allergic disease (ortholog); anemia (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955577 930612 971698 + 102025957 AGCD01075420;AGCD01075421;AGCD01075422;AGCD01075423;AGCD01075424;AGCD01075425;GBBH01208630;GBDJ01195577;XM_013509632;XM_013509634 XP_013365086;XP_013365088 MODEL 8977089 protein-coding Kdelr3 KDEL endoplasmic reticulum protein retention receptor 3 ENCODES a protein that exhibits ER lumen protein retrieval receptor activity (ortholog); INVOLVED IN retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN COPI-coated vesicle membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955413 24638551 24648723 + 102020321 AGCD01014373;GBDF01290082;XM_005379260 XP_005379317 MODEL 8964264 pseudo LOC102018643 tubulin alpha-1 chain-like NW_004955534 1689738 1691268 - 102018643 AGCD01070507 MODEL 730469561 misc_rna DLG2-AS1_1 DLG2 antisense RNA 1 conserved region 1 8787087 protein-coding LOC102010401 carboxylesterase 1D-like NW_004955433 13332713 13350578 - 102010401 AGCD01031684;AGCD01031685;XM_013516104 XP_013371558 MODEL 8701664 ncrna LOC102009258 uncharacterized LOC102009258 NW_004955410 7298409 7299909 + 102009258 AGCD01010712;GBDK01133796;XR_259823;XR_259824 MODEL 39132389 snrna U6 U6 spliceosomal RNA 8735283 protein-coding Kti12 KTI12 chromatin associated homolog NW_004955464 7082211 7084748 + 102022174 AGCD01050053;GBCE01122911;XM_005398591 XP_005398648 MODEL 8980605 pseudo LOC102004429 40S ribosomal protein S2 pseudogene NW_004955561 1164116 1164961 - 102004429 AGCD01073840 MODEL 730469203 scarna SCARNA18 small Cajal body-specific RNA 18 8708639 protein-coding Tubb1 tubulin beta 1 class VI ENCODES a protein that exhibits structural constituent of cytoskeleton (ortholog); INVOLVED IN microtubule polymerization (ortholog); microtubule-based process (ortholog); platelet aggregation (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; tyrosinemia type III pathway; vinblastine pharmacodynamics pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); autosomal dominant isolated macrothrombocytopenia 1 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN ciliary tip (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955445 569504 576129 - 102019117 AGCD01039320;GBDJ01340647;XM_005392213 XP_005392270 MODEL 9010649 pseudo LOC102025138 ribosome-recycling factor, mitochondrial pseudogene NW_004955424 15678952 15680946 - 102025138 AGCD01024722 MODEL 8866248 protein-coding Tbpl1 TATA-box binding protein like 1 ENCODES a protein that exhibits RNA polymerase II core promoter sequence-specific DNA binding (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN acrosome assembly (ortholog); dTTP biosynthetic process (ortholog); spermatid nucleus differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955439 2539465 2548351 - 102007153 AGCD01035652;GBCQ01149643;GBDI01355030;XM_013517403 XP_013372857 MODEL 8753187 protein-coding CUNH4orf17 chromosome unknown C4orf17 homolog ASSOCIATED WITH esophageal cancer (ortholog); sarcoma (ortholog); thymoma (ortholog) NW_004955496 8047756 8068982 - 102024357 AGCD01062388;GBDI01110530;XM_005406272 XP_005406329 MODEL 8756615 protein-coding Slc66a2 solute carrier family 66 member 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955402 63035932 63073981 - 102027031 AGCD01001653;AGCD01001654;GBDJ01133639;XM_005373118;XM_005373119;XM_005373120;XM_013511651 XP_005373175;XP_005373176;XP_005373177;XP_013367105 MODEL 8804283 protein-coding Shroom1 shroom family member 1 ENCODES a protein that exhibits actin filament binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); lung cancer (ortholog) NW_004955408 4194296 4218616 - 102016242 AGCD01008091;AGCD01008092;AGCD01008093;AGCD01008094;GBBH01224044;GBCE01081633;XM_013507376 XP_013362830 MODEL 39133100 snrna U6 U6 spliceosomal RNA 9012377 ncrna LOC102005131 uncharacterized LOC102005131 NW_004955413 25513569 25515865 - 102005131 AGCD01014408;AGCD01014409;GBDK01271867;XR_001233049;XR_260114 MODEL 8844587 protein-coding LOC102003692 cytoplasmic FMR1-interacting protein 1 NW_004955533 1057633 1203027 + 102003692 AGCD01070337;AGCD01070338;AGCD01070339;AGCD01070340;AGCD01070341;AGCD01070342;AGCD01070343;AGCD01070344;AGCD01070345;AGCD01070346;AGCD01070347;AGCD01070348;GBBH01063748;GBDF01122441;XM_013507676 XP_013363130 MODEL 8853598 ncrna LOC102013996 uncharacterized LOC102013996 NW_004955403 28302700 28402563 - 102013996 AGCD01002336;GBCQ01089640;XR_001233584;XR_259210 MODEL 8989445 protein-coding S100a13 S100 calcium binding protein A13 ENCODES a protein that exhibits calcium ion binding (ortholog); copper ion binding (ortholog); fibroblast growth factor binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of cytokine production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955545 266674 282408 - 102016637 AGCD01071781;GBDI01022123;XM_005411432;XM_005411433;XM_005411435;XM_013508324;XM_013508325;XM_013508326;XM_013508327;XM_013508328;XM_013508329;XM_013508330;XM_013508331 XP_005411489;XP_005411490;XP_005411492;XP_013363778;XP_013363779;XP_013363780;XP_013363781;XP_013363782;XP_013363783;XP_013363784;XP_013363785 MODEL 8703187 protein-coding LOC102017830 WAP four-disulfide core domain protein 18-like NW_004955451 195886 200393 + 102017830 AGCD01042928;GBCC01009398;XM_005393904;XM_005393905 XP_005393961;XP_005393962 MODEL 9066203 protein-coding LOC102009638 olfactory receptor 5M11-like NW_004955511 1723110 1724093 + 102009638 AGCD01066377;XM_005407974 XP_005408031 MODEL 8799840 pseudo LOC102007711 26S protease regulatory subunit 10B pseudogene NW_004955444 11911103 11912271 + 102007711 AGCD01039057 MODEL 9034715 protein-coding Npy4r neuropeptide Y receptor Y4 ENCODES a protein that exhibits pancreatic polypeptide receptor activity (ortholog); peptide binding (ortholog); peptide hormone binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955510 6198051 6199169 + 102015553 AGCD01066303;XM_005407918 XP_005407975 MODEL 8889012 protein-coding Slc16a7 solute carrier family 16 member 7 ENCODES a protein that exhibits identical protein binding (ortholog); lactate transmembrane transporter activity (ortholog); pyruvate transmembrane transporter activity (ortholog); INVOLVED IN lactate transmembrane transport (ortholog); plasma membrane lactate transport (ortholog); pyruvate transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) NW_004955458 7232886 7352782 + 102014648 AGCD01047582;AGCD01047583;GBDF01156412;XM_005397423;XM_005397424;XM_005397425;XM_005397427 XP_005397480;XP_005397481;XP_005397482;XP_005397484 MODEL 10135386 ncrna LOC106147282 uncharacterized LOC106147282 NW_004955408 724681 725910 - 106147282 AGCD01007927;GBBH01183499;XR_001232093 MODEL 8971412 protein-coding Ikzf3 IKAROS family zinc finger 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); identical protein binding (ortholog); INVOLVED IN B cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of apoptotic process (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955451 14483669 14571108 - 102003825 AGCD01043556;AGCD01043557;AGCD01043558;GBDF01181093;XM_013519415;XM_013519416;XM_013519417;XM_013519418 XP_013374869;XP_013374870;XP_013374871;XP_013374872 MODEL 8843355 pseudo LOC102020140 60S ribosomal protein L23a-like NW_004955425 16223031 16238637 - 102020140 AGCD01025599 MODEL 8893304 pseudo LOC102022999 U1 small nuclear ribonucleoprotein C pseudogene NW_004955454 3602309 3602766 - 102022999 AGCD01045094 MODEL 9027619 protein-coding LOC102003362 60S ribosomal protein L29-like NW_004955505 6929524 6988367 + 102003362 AGCD01065190;AGCD01065191;AGCD01065192;AGCD01065193;XM_005407177 XP_005407234 MODEL 8834662 protein-coding Sufu SUFU negative regulator of hedgehog signaling ENCODES a protein that exhibits beta-catenin binding (ortholog); protein kinase binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN aorta development (ortholog); coronary vasculature development (ortholog); determination of left/right symmetry (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma (ortholog); basal cell carcinoma (ortholog); brain glioblastoma multiforme (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); GLI-SUFU complex (ortholog) NW_004955485 7805244 7925414 - 102014786 AGCD01058678;AGCD01058679;AGCD01058680;GBCE01169563;XM_005403832;XM_005403833;XM_013504037;XM_013504038;XM_013504039;XM_013504041;XM_013504042;XM_013504043 XP_005403889;XP_005403890;XP_013359491;XP_013359492;XP_013359493;XP_013359495;XP_013359496;XP_013359497 MODEL 9022771 protein-coding Gas2 growth arrest specific 2 INVOLVED IN antral ovarian follicle growth (ortholog); basement membrane organization (ortholog); initiation of primordial ovarian follicle growth (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); autosomal recessive nonsyndromic deafness 125 (ortholog); FOUND IN membrane (ortholog) NW_004955476 3092461 3226269 + 102010363 AGCD01055237;AGCD01055238;AGCD01055239;GBBH01169837;XM_005401734;XM_005401735;XM_013502977 XP_005401791;XP_005401792;XP_013358431 MODEL 8752519 protein-coding Blnk B cell linker ENCODES a protein that exhibits enzyme binding (ortholog); lipid binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); positive regulation of gene expression (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH agammaglobulinemia (ortholog); agammaglobulinemia 4 (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955507 2398694 2466461 - 102015652 AGCD01065587;AGCD01065588;AGCD01065589;GBBH01092683;XM_005407570;XM_013506235;XM_013506236 XP_005407627;XP_013361689;XP_013361690 MODEL 9017796 protein-coding LOC102021966 uncharacterized LOC102021966 NW_004955476 11530073 11534189 + 102021966 AGCD01055464;AGCD01055465;GBCB01109792;XM_005401860;XR_263647 XP_005401917 MODEL 8924684 protein-coding Smg7 SMG7 nonsense mediated mRNA decay factor ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); telomeric repeat DNA binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nonsense-mediated decay complex (ortholog) NW_004955406 22273298 22352782 + 102022666 AGCD01006155;AGCD01006156;AGCD01006157;GBBH01164038;XM_005375022;XM_005375023;XM_005375025;XM_005375026;XM_005375028 XP_005375079;XP_005375080;XP_005375082;XP_005375083;XP_005375085 MODEL 39132724 snrna U6 U6 spliceosomal RNA 8720519 protein-coding Gip gastric inhibitory polypeptide ENCODES a protein that exhibits gastric inhibitory polypeptide receptor binding (ortholog); receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); digestive system development (ortholog); ASSOCIATED WITH Anorexia (ortholog); autonomic nervous system disease (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN extracellular region (ortholog); neuronal cell body (ortholog) NW_004955451 12390938 12396599 + 102014635 AGCD01043392;GBDF01099659;XM_005394598 XP_005394655 MODEL 9067683 protein-coding Fgf18 fibroblast growth factor 18 ENCODES a protein that exhibits type 1 fibroblast growth factor receptor binding (ortholog); type 2 fibroblast growth factor receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); chondrocyte development (ortholog); endochondral ossification (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Diaphragmatic Hernia (ortholog); Dwarfism (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955408 24225459 24260057 + 102021852 AGCD01008604;GBBH01096243;XM_005376329 XP_005376386 MODEL 8766898 pseudo LOC102010402 small integral membrane protein 15-like NW_004955434 9168651 9169463 + 102010402 AGCD01032291 MODEL 8714999 protein-coding Dtna dystrobrevin alpha ENCODES a protein that exhibits PDZ domain binding (ortholog); phosphatase binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Cardiac Arrhythmias (ortholog); cardiomyopathy (ortholog); FOUND IN axon (ortholog); cell junction (ortholog); cell projection (ortholog) NW_004955402 21414122 21676389 + 102026692 AGCD01000590;AGCD01000591;AGCD01000592;GBDJ01229810;XM_005372772;XM_005372773;XM_005372775;XM_005372778;XM_005372779;XM_005372780;XM_005372782;XM_005372783;XM_005372786;XM_005372788;XM_005372790;XM_013508451;XM_013508483;XM_013508554;XM_013508773;XM_013508872 XP_005372829;XP_005372830;XP_005372832;XP_005372835;XP_005372836;XP_005372837;XP_005372839;XP_005372840;XP_005372843;XP_005372845;XP_005372847;XP_013363905;XP_013363937;XP_013364008;XP_013364227;XP_013364326 MODEL 8996451 ncrna LOC102012834 uncharacterized LOC102012834 NW_004955409 11180475 11194137 + 102012834 AGCD01009500;AGCD01009501;GBBH01138314;XR_001232647;XR_001232648 MODEL 8977075 protein-coding Ets2 ETS proto-oncogene 2, transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); nuclear glucocorticoid receptor binding (ortholog); INVOLVED IN ectodermal cell fate commitment (ortholog); mesoderm development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955407 37747152 37764170 + 102020309 AGCD01007785;GBDF01304491;XM_005375762 XP_005375819 MODEL 8800091 protein-coding LOC102021246 arylacetamide deacetylase-like 4 NW_004955486 922340 931576 + 102021246 AGCD01058906;XM_005403940 XP_005403997 MODEL 8739650 ncrna LOC102019012 uncharacterized LOC102019012 NW_004955403 46753348 46754897 + 102019012 AGCD01002867;GBDF01016883;XR_259245 MODEL 8745521 ncrna LOC102009260 uncharacterized LOC102009260 NW_004955463 9987660 9990965 - 102009260 AGCD01049803;GBDF01112751;XR_263165 MODEL 39133458 snrna U4 U4 spliceosomal RNA 8744085 protein-coding Lrrc40 leucine rich repeat containing 40 ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955423 21706336 21749720 + 102009398 AGCD01023947;AGCD01023948;GBDF01123516;XM_005385259;XM_005385260;XM_013514398;XM_013514399 XP_005385316;XP_005385317;XP_013369852;XP_013369853 MODEL 8970244 protein-coding LOC102012465 transmembrane emp24 domain-containing protein 11 NW_004955514 560181 584300 - 102012465 AGCD01067014;GBDJ01333431;XM_005408689 XP_005408746 MODEL 8860508 protein-coding Wscd1 WSC domain sialate O sulfotransferase 1 ENCODES a protein that exhibits sulfotransferase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955467 11642318 11684265 + 102030293 AGCD01051614;AGCD01051615;AGCD01051616;GBDJ01225220;XM_005399657;XM_005399659 XP_005399714;XP_005399716 MODEL 8743996 ncrna LOC102004433 uncharacterized LOC102004433 NW_004955446 7583181 7605662 - 102004433 AGCD01040125;AGCD01040126;GBCQ01106414;XR_001235672;XR_001235673;XR_001235674;XR_001235675;XR_001235676;XR_001235677;XR_001235678;XR_001235679;XR_001235680;XR_262387 MODEL 8917553 pseudo LOC102015906 general transcription factor IIF subunit 2 pseudogene NW_004955402 44325761 44326706 + 102015906 AGCD01001109;XM_005373007 MODEL 8912261 protein-coding Tsga10ip testis specific 10 interacting protein NW_004955422 19372072 19389144 - 102022710 AGCD01023002;AGCD01023003;AGCD01023004;AGCD01023005;GBDF01008093;XM_005384439 XP_005384496 MODEL 8840932 ncrna LOC102018644 uncharacterized LOC102018644 NW_004955536 3109313 3110744 + 102018644 AGCD01070809;GBDF01306563;XR_001232063;XR_001232064 MODEL 8936120 protein-coding LOC102003694 nascent polypeptide-associated complex subunit alpha, muscle-specific form-like NW_004955538 3385693 3395187 - 102003694 AGCD01071162;GBCE01032832;XM_005410855;XM_013507906;XM_013507908;XM_013507909;XM_013507910;XR_001232100 XP_005410912;XP_013363360;XP_013363362;XP_013363363;XP_013363364 MODEL 8882673 ncrna LOC102005132 uncharacterized LOC102005132 NW_004955470 10770420 10783689 - 102005132 AGCD01052876;AGCD01052877;GBDF01112853;XR_263499;XR_263500 MODEL 8857247 protein-coding Kdf1 keratinocyte differentiation factor 1 INVOLVED IN developmental growth (ortholog); epidermal cell differentiation (ortholog); establishment of skin barrier (ortholog); ASSOCIATED WITH anodontia (ortholog); ectodermal dysplasia 12 (ortholog); genetic disease (ortholog); FOUND IN cell cortex (ortholog); cell junction (ortholog); cell leading edge (ortholog) NW_004955452 6280391 6288985 - 102026068 AGCD01044100;AGCD01044101;GBDI01070239;XM_005394888;XM_005394890;XM_005394891;XM_005394892;XM_005394893 XP_005394945;XP_005394947;XP_005394948;XP_005394949;XP_005394950 MODEL 730469136 misc_rna DLG2-AS1_2 DLG2 antisense RNA 1 conserved region 2 8781690 protein-coding Gsdme gasdermin E ENCODES a protein that exhibits cardiolipin binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); wide pore channel activity (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); cellular response to virus (ortholog); granzyme-mediated programmed cell death signaling pathway (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 5 (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955410 26700977 26761683 - 102022058 AGCD01011199;AGCD01011200;AGCD01011201;AGCD01011202;GBBH01177049;GBDF01039820;XM_013510599;XM_013510600 XP_013366053;XP_013366054 MODEL 9054408 protein-coding LOC102017831 protocadherin alpha-4-like NW_004955611 288464 291968 + 102017831 AGCD01077159;XM_013510123 XP_013365577 MODEL 8999574 protein-coding Lhfpl2 LHFPL tetraspan subfamily member 2 INVOLVED IN development of primary female sexual characteristics (ortholog); development of primary male sexual characteristics (ortholog); positive regulation of fertilization (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog) NW_004955425 22398503 22556667 + 102014585 AGCD01025820;AGCD01025821;AGCD01025822;GBDF01029543;GBDF01277818;XM_005386018;XM_005386019 XP_005386075;XP_005386076 MODEL 8780735 protein-coding LOC102007712 basic proline-rich protein-like NW_004955445 2689893 2693822 - 102007712 AGCD01039361;GBDF01211368;XM_005392263;XR_001235561;XR_262297 XP_005392320 MODEL 8950879 protein-coding Npy5r neuropeptide Y receptor Y5 ENCODES a protein that exhibits neuropeptide Y receptor activity (ortholog); pancreatic polypeptide receptor activity (ortholog); peptide YY receptor activity (ortholog); INVOLVED IN cardiac left ventricle morphogenesis (ortholog); chemical synaptic transmission (ortholog); eating behavior (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); alcohol use disorder (ortholog); Alcohol Withdrawal Seizures (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); GABA-ergic synapse (ortholog); membrane (ortholog) NW_004955403 41667632 41675619 - 102016659 AGCD01002730;AGCD01002731;GBDF01239241;XM_005373599;XM_005373600;XM_013513552;XM_013513555 XP_005373656;XP_005373657;XP_013369006;XP_013369009 MODEL 39132390 snrna U6 U6 spliceosomal RNA 39133008 snrna U6 U6 spliceosomal RNA 8932291 protein-coding Ktn1 kinectin 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955466 13664312 13747368 - 102010141 AGCD01051180;AGCD01051181;AGCD01051182;AGCD01051183;GBCB01002346;XM_005399233;XM_005399234;XM_013521982;XM_013521983;XM_013521984 XP_005399290;XP_005399291;XP_013377436;XP_013377437;XP_013377438 MODEL 8703253 pseudo LOC102020141 general transcription factor IIH subunit 1 pseudogene NW_004955501 6162583 6163797 + 102020141 AGCD01064181 MODEL 8769186 protein-coding CUNH4orf36 chromosome unknown C4orf36 homolog ASSOCIATED WITH lung cancer (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955474 2934400 2939999 + 102018385 AGCD01054314;GBDF01089496;XM_005401343 XP_005401400 MODEL 8719062 protein-coding Slc66a3 solute carrier family 66 member 3 ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955487 5848723 5855425 + 102005382 AGCD01059348;GBCE01054645;XM_005404424 XP_005404481 MODEL 8852888 protein-coding Sugct succinyl-CoA:glutarate-CoA transferase ENCODES a protein that exhibits succinate-hydroxymethylglutarate CoA-transferase activity (ortholog); ASSOCIATED WITH Failure to Thrive (ortholog); Familial Prostate Cancer (ortholog); glutaric acidemia type 3 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955460 2866466 3559625 - 102017101 AGCD01048397;AGCD01048398;AGCD01048399;AGCD01048400;AGCD01048401;AGCD01048402;AGCD01048403;AGCD01048404;AGCD01048405;AGCD01048406;AGCD01048407;AGCD01048408;AGCD01048409;AGCD01048410;AGCD01048411;AGCD01048412;AGCD01048413;AGCD01048414;GBCQ01000479;XM_005397726;XM_013521156;XM_013521157;XM_013521158;XM_013521159 XP_005397783;XP_013376610;XP_013376611;XP_013376612;XP_013376613 MODEL 39131564 protein-coding TNFRSF13C TNF receptor superfamily member 13C 8751490 protein-coding Shroom2 shroom family member 2 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical plasma membrane (ortholog) NW_004955499 8031961 8103307 + 102027320 AGCD01063614;AGCD01063615;AGCD01063616;GBCQ01149920;GBDJ01063804;XM_013505603;XM_013505604 XP_013361057;XP_013361058 MODEL 8719988 pseudo LOC102013999 protein mago nashi homolog 2 pseudogene NW_004955403 41539551 41539998 + 102013999 AGCD01002723 MODEL 8844691 protein-coding Qng1 Q-nucleotide N-glycosylase 1 ENCODES a protein that exhibits queuosine nucleosidase activity (ortholog); INVOLVED IN nucleoside salvage (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955432 3273161 3284261 + 102006267 AGCD01030647;GBDF01126625;GBDF01126628;XM_013516079 XP_013371533 MODEL 9045287 protein-coding Slc16a8 solute carrier family 16 member 8 ASSOCIATED WITH COVID-19 (ortholog); macular degeneration (ortholog); sarcoma (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955413 24400621 24406754 - 102015095 AGCD01014364;AGCD01014365;AGCD01014366;GBBH01069709;GBCE01068470;XM_013511545 XP_013366999 MODEL 8950854 protein-coding Gipc1 GIPC PDZ domain containing family member 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); myosin binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); chemical synaptic transmission (ortholog); endothelial cell migration (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); oculopharyngodistal myopathy 2 (ortholog); FOUND IN brush border (ortholog); cell cortex (ortholog); cytoplasm (ortholog) NW_004955415 33067689 33077749 - 102016378 AGCD01016748;GBCB01058770;XM_005381102 XP_005381159 MODEL 730469056 scarna SCARNA18 small Cajal body-specific RNA 18 8943506 protein-coding LOC102025141 taste receptor type 2 member 1-like NW_004955504 6888806 6889702 - 102025141 AGCD01064930;XM_005407092 XP_005407149 MODEL 8990353 pseudo LOC102023010 iron-sulfur cluster assembly 1 homolog, mitochondrial pseudogene NW_004955409 23655947 23657129 + 102023010 AGCD01010069 MODEL 8865501 protein-coding LOC102003363 olfactory receptor 8K5-like NW_004955511 1379800 1390219 + 102003363 AGCD01066366;XM_005407957;XM_005407958;XM_005407959 XP_005408014;XP_005408015;XP_005408016 MODEL 39133101 snrna U6 U6 spliceosomal RNA 8701428 protein-coding Tex12 testis expressed 12 INVOLVED IN meiotic DNA repair synthesis (ortholog); synaptonemal complex assembly (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN central element (ortholog); centrosome (ortholog); chromosome (ortholog) NW_004955412 13829637 13834481 + 102028391 AGCD01012846;GBCQ01024502;XM_005378113;XM_005378115;XM_005378116;XM_005378117;XM_013511042;XM_013511044 XP_005378170;XP_005378172;XP_005378173;XP_005378174;XP_013366496;XP_013366498 MODEL 39132391 snrna U6 U6 spliceosomal RNA 9029961 protein-coding S100a14 S100 calcium binding protein A14 ENCODES a protein that exhibits chemokine receptor binding (ortholog); INVOLVED IN defense response to bacterium (ortholog); positive regulation of granulocyte chemotaxis (ortholog); positive regulation of monocyte chemotaxis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955545 261483 263689 - 102014174 AGCD01071781;GBDJ01073258;XM_005411418 XP_005411475 MODEL 8750346 protein-coding LOC102009639 BBSome-interacting protein 1-like NW_004955430 6423139 6423588 - 102009639 AGCD01029292;GBCC01033208;XM_005387391;XM_013515616 XP_005387448;XP_013371070 MODEL 8840224 protein-coding Bloc1s1 biogenesis of lysosomal organelles complex 1 subunit 1 ENCODES a protein that exhibits protein-lysine-acetyltransferase activity (ortholog); INVOLVED IN aerobic respiration (ortholog); anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); FOUND IN BLOC-1 complex (ortholog); BORC complex (ortholog); cytosol (ortholog) NW_004955458 3352442 3356224 + 102020885 AGCD01047296;GBDF01048251;XM_005397258 XP_005397315 MODEL 8782984 ncrna LOC102018646 uncharacterized LOC102018646 NW_004955538 2638259 2653814 + 102018646 AGCD01071133;AGCD01071134;GBDK01170259;XR_001232095 MODEL 8700369 protein-coding Tsga13 testis specific 13 ASSOCIATED WITH pheochromocytoma/paraganglioma syndrome 1 (ortholog); urinary bladder cancer (ortholog) NW_004955410 36964398 36982042 + 102009259 AGCD01011441;AGCD01011442;GBDF01010268;XM_005377551;XM_005377552;XM_005377553;XM_013510641 XP_005377608;XP_005377609;XP_005377610;XP_013366095 MODEL 8772672 protein-coding Smg8 SMG8 nonsense mediated mRNA decay factor INVOLVED IN nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); ASSOCIATED WITH ALZAHRANI-KUWAHARA SYNDROME (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN serine/threonine protein kinase complex (ortholog) NW_004955451 3803325 3809055 - 102015796 AGCD01043073;GBDK01026975;XM_005393989;XM_005393990 XP_005394046;XP_005394047 MODEL 8852633 ncrna LOC102010405 uncharacterized LOC102010405 NW_004955436 1481983 1512078 + 102010405 AGCD01033577;AGCD01033578;AGCD01033579;GBDF01153927;XR_001234957;XR_001234958;XR_001234959;XR_001234960;XR_001234961;XR_001234962;XR_001234963;XR_001234964 MODEL 9010589 protein-coding LOC102021968 serine/threonine-protein kinase B-raf-like NW_004955416 31492945 31499854 + 102021968 AGCD01017758;XM_013512431 XP_013367885 MODEL 8869333 protein-coding LOC102005144 cytidine monophosphate-N-acetylneuraminic acid hydroxylase NW_004955483 1836388 2025256 + 102005144 AGCD01057655;AGCD01057656;AGCD01057657;AGCD01057658;AGCD01057659;AGCD01057660;AGCD01057661;AGCD01057662;AGCD01057663;AGCD01057664;AGCD01057665;AGCD01057666;GBCE01108999;XM_005403351;XM_005403352;XM_005403353;XM_013503835;XM_013503836;XM_013503837 XP_005403408;XP_005403409;XP_005403410;XP_013359289;XP_013359290;XP_013359291 MODEL 8729710 protein-coding Fgf19 fibroblast growth factor 19 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); heart development (ortholog); negative regulation of bile acid biosynthetic process (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); cholangiocarcinoma (ortholog); colitis (ortholog) NW_004955422 16415880 16419528 + 102017135 AGCD01022898;GBDJ01222896;XM_005384961 XP_005385018 MODEL 9028520 protein-coding Kxd1 KxDL motif containing 1 INVOLVED IN lysosome localization (ortholog); vesicle-mediated transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Hermansky-Pudlak syndrome (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN BLOC-1 complex (ortholog); BORC complex (ortholog) NW_004955524 3010997 3018309 - 102026252 AGCD01068849;AGCD01068850;GBBH01091261;XM_005409585;XM_005409586;XM_013507288 XP_005409642;XP_005409643;XP_013362742 MODEL 9010434 pseudo LOC102012837 glycerophosphocholine phosphodiesterase GPCPD1 pseudogene NW_004955410 7980036 7985561 - 102012837 AGCD01010730 MODEL 8707426 pseudo LOC102021248 nucleolar GTP-binding protein 1 pseudogene NW_004955420 8696925 8699253 + 102021248 AGCD01020731 MODEL 9040287 protein-coding Tubb4a tubulin beta 4A class IVa ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN negative regulation of microtubule polymerization (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); attention deficit hyperactivity disorder (ortholog); brain disease (ortholog); FOUND IN axoneme (ortholog); ciliary tip (ortholog); cilium (ortholog) NW_004955495 3134181 3138725 + 102011456 AGCD01061828;GBCQ01009443;XM_005405712 XP_005405769 MODEL 9049610 ncrna LOC102009262 uncharacterized LOC102009262 NW_004955411 32414637 32423545 - 102009262 AGCD01012315;AGCD01012316;AGCD01012317;GBCQ01032791;XR_001232824;XR_259951 MODEL 39133461 snrna U4 U4 spliceosomal RNA 8894677 protein-coding Tbpl2 TATA-box binding protein like 2 ENCODES a protein that exhibits DNA binding (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955466 13869429 13897302 + 102011522 AGCD01051189;AGCD01051190;GBDF01035908;XM_005399237 XP_005399294 MODEL 39133010 snrna U6 U6 spliceosomal RNA 8819380 protein-coding Dtnb dystrobrevin beta ENCODES a protein that exhibits DNA binding (ortholog); molecular adaptor activity (ortholog); phosphatase binding (ortholog); INVOLVED IN neuron differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN basal plasma membrane (ortholog); cytoplasm (ortholog); GABA-ergic synapse (ortholog) NW_004955469 7402777 7771767 - 102007104 AGCD01052415;AGCD01052416;AGCD01052417;AGCD01052418;AGCD01052419;AGCD01052420;AGCD01052421;AGCD01052422;AGCD01052423;AGCD01052424;AGCD01052425;AGCD01052426;AGCD01052427;AGCD01052428;AGCD01052429;AGCD01052430;AGCD01052431;AGCD01052432;GBDK01182459;XM_013522576;XM_013522577;XM_013522578;XM_013522579;XM_013522580;XM_013522581;XM_013522582;XM_013522583;XM_013522584;XM_013522585;XM_013522586;XM_013522587;XM_013522588;XM_013522589;XM_013522590;XM_013522591;XM_013522592;XM_013522593;XM_013522594;XM_013522595 XP_013378030;XP_013378031;XP_013378032;XP_013378033;XP_013378034;XP_013378035;XP_013378036;XP_013378037;XP_013378038;XP_013378039;XP_013378040;XP_013378041;XP_013378042;XP_013378043;XP_013378044;XP_013378045;XP_013378046;XP_013378047;XP_013378048;XP_013378049 MODEL 8965113 protein-coding Gas2l1 growth arrest specific 2 like 1 ENCODES a protein that exhibits cytoskeletal adaptor activity (ortholog); microtubule binding (ortholog); INVOLVED IN cellular response to starvation (ortholog); microtubule bundle formation (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN actin filament (ortholog); cytoplasm (ortholog); microtubule (ortholog) NW_004955455 3613092 3618476 + 102004454 AGCD01045640;GBCQ01121743;GBDK01194366;XM_005396197;XM_005396198 XP_005396254;XP_005396255 MODEL 8785102 pseudo LOC102012468 ribose-phosphate pyrophosphokinase 1-like NW_004955519 2455691 2458425 + 102012468 AGCD01067931;AGCD01067932 MODEL 8987817 protein-coding Lrrc41 leucine rich repeat containing 41 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955464 11976259 11996588 + 102021536 AGCD01050169;AGCD01050170;GBDF01002957;XM_005398681;XM_013521589 XP_005398738;XP_013377043 MODEL 8924544 protein-coding Tacr3 tachykinin receptor 3 ENCODES a protein that exhibits neuromedin K receptor activity (ortholog); tachykinin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); conditioned place preference (ortholog); drinking behavior (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); amenorrhea (ortholog); FOUND IN axon terminus (ortholog); dendrite membrane (ortholog); dendritic spine head (ortholog) NW_004955496 5152134 5222565 + 102011678 AGCD01062346;AGCD01062347;AGCD01062348;GBDJ01006793;XM_005406230 XP_005406287 MODEL 8861321 protein-coding LOC102004443 uncharacterized LOC102004443 NW_004955450 6923696 6931369 + 102004443 AGCD01042529;GBDK01381035;XM_005393876 XP_005393933 MODEL 8839556 protein-coding LOC102003701 vomeronasal type-1 receptor 1-like NW_004955558 687163 688056 + 102003701 AGCD01073385;XM_005412741 XP_005412798 MODEL 39132725 snrna U6 U6 spliceosomal RNA 8947631 pseudo LOC102017837 uncharacterized LOC102017837 NW_004955404 7713697 7732135 - 102017837 AGCD01003342 MODEL 8911030 protein-coding Ikzf4 IKAROS family zinc finger 4 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein homooligomerization (ortholog); ASSOCIATED WITH alopecia areata (ortholog); encephalomyelitis (ortholog); high grade glioma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955458 3589865 3627154 + 102028270 AGCD01047325;AGCD01047326;AGCD01047327;AGCD01047328;GBBH01094526;GBDF01304051;XM_013520979;XM_013520980;XM_013520981;XM_013520982;XM_013520983;XM_013520984;XM_013520985 XP_013376433;XP_013376434;XP_013376435;XP_013376436;XP_013376437;XP_013376438;XP_013376439 MODEL 9027317 protein-coding Kdm1a lysine demethylase 1A ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to cAMP (ortholog); cellular response to gamma radiation (ortholog); PARTICIPATES IN histone modification pathway; Notch signaling pathway; ASSOCIATED WITH ACTH-independent Macronodular Adrenal Hyperplasia 3 (ortholog); alopecia areata (ortholog); autistic disorder (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955452 3044042 3104650 + 102014206 AGCD01043910;AGCD01043911;AGCD01043912;GBBH01143986;GBDF01212309;XM_013519586;XM_013519587 XP_013375040;XP_013375041 MODEL 8815195 protein-coding Gse1 Gse1 coiled-coil protein INVOLVED IN gene expression (ortholog); in utero embryonic development (ortholog); placenta development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955541 517715 808174 + 102017504 AGCD01071354;AGCD01071355;AGCD01071356;AGCD01071357;AGCD01071358;AGCD01071359;AGCD01071360;GBCE01142303;GBDI01311842;XM_005410972;XM_005410973;XM_005410974;XM_005410975;XM_005410976 XP_005411029;XP_005411030;XP_005411031;XP_005411032;XP_005411033 MODEL 8845859 protein-coding Lhfpl3 LHFPL tetraspan subfamily member 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955410 9121854 9633760 + 102019149 AGCD01010759;AGCD01010760;AGCD01010761;AGCD01010762;AGCD01010763;AGCD01010764;AGCD01010765;AGCD01010766;AGCD01010767;AGCD01010768;GBCQ01019245;XM_005377238;XM_005377239 XP_005377295;XP_005377296 MODEL 9014054 pseudo LOC102019018 calcyclin-binding protein pseudogene NW_004955405 8575773 8576688 - 102019018 AGCD01004749 MODEL 8914672 protein-coding LOC102007716 zinc finger protein 416 NW_004955584 345732 357089 - 102007716 AGCD01075940;GBDF01260674;XM_013509856;XR_001232513;XR_001232514 XP_013365310 MODEL 9067035 protein-coding Etv1 ETS variant transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); mechanosensory behavior (ortholog); muscle organ development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Colorectal Neoplasms (ortholog); esophageal cancer (ortholog) NW_004955410 17445496 17535856 - 102018368 AGCD01010989;GBDF01182370;XM_013510658;XM_013510659;XM_013510660;XM_013510662;XM_013510663 XP_013366112;XP_013366113;XP_013366114;XP_013366116;XP_013366117 MODEL 8874515 pseudo LOC102010411 WW domain-containing adapter protein with coiled-coil pseudogene NW_004955545 1844626 1846296 - 102010411 AGCD01071873 MODEL 8865192 ncrna LOC102020144 uncharacterized LOC102020144 NW_004955428 4408830 4453931 - 102020144 AGCD01027690;AGCD01027691;AGCD01027692;AGCD01027693;GBDF01084251;XR_001234436 MODEL 8788500 protein-coding Slc16a9 solute carrier family 16 member 9 ENCODES a protein that exhibits carnitine transmembrane transporter activity (ortholog); creatine transmembrane transporter activity (ortholog); INVOLVED IN carnitine transmembrane transport (ortholog); creatine transmembrane transport (ortholog); urate metabolic process (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); testicular germ cell cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955425 13249903 13300705 - 102013521 AGCD01025529;GBCQ01010027;XM_005385930;XM_005385931;XM_005385932;XM_005385933;XM_013514881;XM_013514882 XP_005385987;XP_005385988;XP_005385989;XP_005385990;XP_013370335;XP_013370336 MODEL 8915717 protein-coding Wscd2 WSC domain sialate O sulfotransferase 2 ENCODES a protein that exhibits sulfotransferase activity (ortholog); ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955455 9433628 9549862 + 102022566 AGCD01045921;AGCD01045922;AGCD01045923;GBBH01097863;GBCQ01173215;XM_013520454;XM_013520455 XP_013375908;XP_013375909 MODEL 39133102 snrna U6 U6 spliceosomal RNA 39132393 snrna U6 U6 spliceosomal RNA 9018127 pseudo LOC102014002 cyclin-G1-like NW_004955405 15776517 15779140 - 102014002 AGCD01004952 MODEL 9035035 protein-coding Tnfrsf13c TNF receptor superfamily member 13C INVOLVED IN B cell costimulation (ortholog); B cell homeostasis (ortholog); positive regulation of B cell proliferation (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); common variable immunodeficiency (ortholog); common variable immunodeficiency 4 (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955413 27341977 27344009 - 102026848 AGCD01014503;GBBH01166323;XM_005379376;XM_005379377;XM_013511363 XP_005379433;XP_005379434;XP_013366817 MODEL 8938172 protein-coding Sugp1 SURP and G-patch domain containing 1 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955524 2563299 2584046 + 102010727 AGCD01068822;AGCD01068823;GBDF01000555;XM_005409624;XM_005409625 XP_005409681;XP_005409682 MODEL 8961022 protein-coding Shroom3 shroom family member 3 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); columnar/cuboidal epithelial cell development (ortholog); neural tube closure (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); stomach cancer (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) NW_004955433 1135589 1423449 + 102004844 AGCD01031348;AGCD01031349;AGCD01031350;AGCD01031351;AGCD01031352;AGCD01031353;AGCD01031354;AGCD01031355;AGCD01031356;GBBH01187068;XM_013516209 XP_013371663 MODEL 8863071 protein-coding Tex13a testis expressed 13A NW_004955548 2078523 2080119 - 102005305 AGCD01072386;GBDK01049334;XM_005412010 XP_005412067 MODEL 8903454 protein-coding LOC102009640 olfactory receptor 10AG1-like NW_004955511 857241 858197 - 102009640 AGCD01066345;XM_013506363 XP_013361817 MODEL 8791327 protein-coding LOC102018647 uncharacterized LOC102018647 NW_004955538 3457041 3463322 - 102018647 AGCD01071164;GBDI01201463;XM_013507825 XP_013363279 MODEL 9066394 protein-coding Dlg3 discs large MAGUK scaffold protein 3 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); kinase binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN establishment of planar polarity (ortholog); establishment or maintenance of epithelial cell apical/basal polarity (ortholog); neurotransmitter receptor transport to postsynaptic membrane (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Ataxia (ortholog); autistic disorder (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) NW_004955475 9992888 10056197 + 102024998 AGCD01055080;AGCD01055081;AGCD01055082;GBDI01210941;XM_005401627;XM_005401628;XM_005401629;XM_005401630;XM_005401631;XM_005401632;XM_005401633 XP_005401684;XP_005401685;XP_005401686;XP_005401687;XP_005401688;XP_005401689;XP_005401690 MODEL 8937728 protein-coding Nqo1 NAD(P)H quinone dehydrogenase 1 ENCODES a protein that exhibits identical protein binding (ortholog); NAD(P)H dehydrogenase (quinone) activity (ortholog); NADH dehydrogenase (quinone) (non-electrogenic) activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to metal ion (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; nuclear factor, erythroid 2 like 2 signaling pathway; oxidative stress response pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955484 7012373 7028182 + 102023037 AGCD01058305;GBDK01069894;XM_013503943 XP_013359397 MODEL 8921477 ncrna LOC102021975 uncharacterized LOC102021975 NW_004955419 27635866 27705302 + 102021975 AGCD01020444;AGCD01020445;AGCD01020446;AGCD01020447;GBDI01327220;XR_001233611;XR_001233612;XR_001233613;XR_001233614;XR_001233615;XR_001233616;XR_001233617;XR_001233618;XR_260666 MODEL 8915950 protein-coding LOC102005146 olfactory receptor 13C8-like NW_004955419 21810593 21816934 - 102005146 AGCD01020283;AGCD01020284;XM_005382788 XP_005382845 MODEL 730469602 scarna SCARNA2 Small Cajal body-specific RNA 2 8788599 protein-coding Fgf2 fibroblast growth factor 2 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine binding (ortholog); cytokine activity (ortholog); INVOLVED IN angiogenesis involved in coronary vascular morphogenesis (ortholog); behavioral response to ethanol (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN ceric oxide nanoparticle response pathway; fibroblast growth factor signaling pathway; glypican signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Animal Mammary Neoplasms (ortholog); Arteriovenous Fistula (ortholog); FOUND IN extracellular region (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955428 17840554 17894779 - 102017484 AGCD01028052;GBBH01210560;GBCQ01087264;XM_013515320 XP_013370774 MODEL 8751975 ncrna LOC102025146 uncharacterized LOC102025146 NW_004955429 15336841 15349273 - 102025146 AGCD01028803;AGCD01028804;GBDF01017223;XR_261338 MODEL 9059247 pseudo LOC102009264 mitochondrial import inner membrane translocase subunit Tim9 pseudogene NW_004955412 19546401 19547571 - 102009264 AGCD01012960 MODEL 8909774 protein-coding LOC102015907 late cornified envelope protein 3A-like NW_004955592 806985 807294 + 102015907 AGCD01076324;XM_013509982 XP_013365436 MODEL 8781536 protein-coding Tacstd2 tumor associated calcium signal transducer 2 INVOLVED IN negative regulation of branching involved in ureteric bud morphogenesis (ortholog); negative regulation of cell motility (ortholog); negative regulation of epithelial cell migration (ortholog); ASSOCIATED WITH corneal dystrophy (ortholog); endometriosis (ortholog); gelatinous drop-like corneal dystrophy (ortholog); FOUND IN basal plasma membrane (ortholog); extracellular region (ortholog); lateral plasma membrane (ortholog) NW_004955464 1282989 1284785 + 102017552 AGCD01049946;GBCQ01007569;XM_005398491 XP_005398548 MODEL 8763104 protein-coding Gas2l2 growth arrest specific 2 like 2 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal adaptor activity (ortholog); G-protein alpha-subunit binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); negative regulation of microtubule depolymerization (ortholog); positive regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH primary ciliary dyskinesia 3 (ortholog); primary ciliary dyskinesia 41 (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN actin filament (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955481 10190738 10202298 - 102019273 AGCD01057138;GBCE01008820;XM_005402885 XP_005402942 MODEL 8943982 protein-coding Qpct glutaminyl-peptide cyclotransferase ENCODES a protein that exhibits glutaminyl-peptide cyclotransferase activity (ortholog); zinc ion binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog) NW_004955441 5138477 5168056 + 102006286 AGCD01036870;AGCD01036871;GBCE01029735;XM_005390874;XM_013517539 XP_005390931;XP_013372993 MODEL 8887802 protein-coding LOC102003364 olfactory receptor 9I1-like NW_004955511 2907070 2908010 - 102003364 AGCD01066433;AGCD01066434;XM_013506378 XP_013361832 MODEL 8793469 protein-coding Bloc1s2 biogenesis of lysosomal organelles complex 1 subunit 2 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); transcription factor binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN BLOC-1 complex (ortholog); BORC complex (ortholog); centrosome (ortholog) NW_004955507 6138511 6144823 - 102021692 AGCD01065697;GBDI01131466;XM_005407689;XM_005407690;XR_264384 XP_005407746;XP_005407747 MODEL 8759788 protein-coding S100a16 S100 calcium binding protein A16 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN response to calcium ion (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955545 254370 260471 - 102013649 AGCD01071781;GBCE01004299;XM_005411416;XM_005411417 XP_005411473;XP_005411474 MODEL 8765133 protein-coding Shroom4 shroom family member 4 ENCODES a protein that exhibits actin filament binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin filament organization (ortholog); brain development (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); intellectual disability (ortholog); lymphoma (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); apical plasma membrane (ortholog) NW_004955543 1810125 2046144 - 102017704 AGCD01071632;AGCD01071633;AGCD01071634;AGCD01071635;AGCD01071636;AGCD01071637;AGCD01071638;AGCD01071639;AGCD01071640;GBDJ01421933;XM_013508168 XP_013363622 MODEL 8889555 protein-coding CUNH4orf54 chromosome unknown C4orf54 homolog NW_004955496 7933953 7949207 + 102003464 AGCD01062387;GBCB01021934;XM_005406288 XP_005406345 MODEL 8704337 protein-coding Gipc2 GIPC PDZ domain containing family member 2 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); pancreatic adenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytosol (ortholog) NW_004955423 15113049 15183211 - 102011331 AGCD01023794;AGCD01023795;AGCD01023796;GBDF01156626;XM_013514544;XM_013514545;XM_013514546;XM_013514547;XR_001234123 XP_013369998;XP_013369999;XP_013370000;XP_013370001 MODEL 8837322 protein-coding Gsg1 germ cell associated 1 ENCODES a protein that exhibits RNA polymerase binding (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955413 9932831 9949607 - 102022272 AGCD01013918;AGCD01013919;GBDF01007551;XM_005378981 XP_005379038 MODEL 8949560 protein-coding Ky kyphoscoliosis peptidase INVOLVED IN muscle organ development (ortholog); neuromuscular junction development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); myofibrillar myopathy (ortholog); myofibrillar myopathy 7 (ortholog); FOUND IN Z disc (ortholog) NW_004955501 3961603 4005095 + 102021027 AGCD01064106;GBCB01020151;XM_005406786;XM_013505809 XP_005406843;XP_013361263 MODEL 8764911 protein-coding LOC102007719 RNA polymerase II elongation factor ELL2-like NW_004955595 658812 660714 - 102007719 AGCD01076475;GBDF01287937;XM_005414679 XP_005414736 MODEL 8753136 ncrna LOC102023012 uncharacterized LOC102023012 NW_004955463 6158930 6199332 + 102023012 AGCD01049657;AGCD01049658;AGCD01049659;GBDF01178775;XR_263154 MODEL 39133011 snrna U6 U6 spliceosomal RNA 8970554 protein-coding Dtnbp1 dystrobrevin binding protein 1 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); BLOC-1 complex (ortholog); cell body (ortholog) NW_004955590 276143 382812 + 102025745 AGCD01076199;AGCD01076200;AGCD01076201;AGCD01076202;GBCQ01103688;XM_013509961;XM_013509962 XP_013365415;XP_013365416 MODEL 8781935 protein-coding Lrrc42 leucine rich repeat containing 42 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955464 5278474 5299125 - 102006755 AGCD01050003;AGCD01050004;GBBH01228032;XM_005398542 XP_005398599 MODEL 10248446 ncrna LOC106147284 uncharacterized LOC106147284 NW_004955538 3087665 3093614 + 106147284 AGCD01071145;GBCE01127531;XR_001232099 MODEL 39133103 snrna U6 U6 spliceosomal RNA 9046681 ncrna LOC102009265 uncharacterized LOC102009265 NW_004955412 20503994 20512991 + 102009265 AGCD01013010;GBDF01155155;XR_260005 MODEL 8908789 ncrna LOC102003703 uncharacterized LOC102003703 NW_004955444 18667764 18677902 + 102003703 AGCD01039249;GBBH01195406;XR_001235492 MODEL 39132726 snrna U6 U6 spliceosomal RNA 8708539 protein-coding Tex13b testis expressed 13B ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955490 7943444 7944995 + 102015732 AGCD01060269;GBDF01087099;XM_005404683 XP_005404740 MODEL 8948880 protein-coding Smg9 SMG9 nonsense mediated mRNA decay factor ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN brain development (ortholog); eye development (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN serine/threonine protein kinase complex (ortholog) NW_004955555 1463031 1481411 - 102020493 AGCD01073082;GBDK01196575;XM_005412456;XM_005412457;XM_005412458 XP_005412513;XP_005412514;XP_005412515 MODEL 8894359 protein-coding Lhfpl4 LHFPL tetraspan subfamily member 4 ENCODES a protein that exhibits GABA receptor binding (ortholog); INVOLVED IN gamma-aminobutyric acid receptor clustering (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); regulation of inhibitory synapse assembly (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN GABA-ergic synapse (ortholog); inhibitory synapse (ortholog); postsynaptic membrane (ortholog) NW_004955561 1066799 1142099 - 102004126 AGCD01073829;AGCD01073830;AGCD01073831;AGCD01073832;AGCD01073833;AGCD01073834;AGCD01073835;AGCD01073836;GBDJ01123683;XM_005413016 XP_005413073 MODEL 8846615 pseudo LOC102019021 vasculin-like protein 1 pseudogene NW_004955452 7262403 7283818 + 102019021 AGCD01044141;AGCD01044142;AGCD01044143;AGCD01044144 MODEL 8879987 protein-coding Ikzf5 IKAROS family zinc finger 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); disease by infectious agent (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955477 1160183 1177597 - 102024795 AGCD01055503;GBDF01002880;XM_005401953;XM_005401954;XM_005401955;XM_013503085;XM_013503086 XP_005402010;XP_005402011;XP_005402012;XP_013358539;XP_013358540 MODEL 8971750 pseudo LOC102012841 LYR motif-containing protein 1 pseudogene NW_004955466 2598628 2602417 - 102012841 AGCD01050748 MODEL 8793157 protein-coding Tubb4b tubulin beta 4B class IVb ENCODES a protein that exhibits double-stranded RNA binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cone-rod dystrophy (ortholog); FOUND IN axonemal microtubule (ortholog); microtubule (ortholog); sperm flagellum (ortholog) NW_004955513 5237050 5239370 + 102011897 AGCD01066963;GBBH01001119;XM_005408609 XP_005408666 MODEL 8721089 ncrna LOC102010412 uncharacterized LOC102010412 NW_004955545 2843891 2852564 - 102010412 AGCD01071925;GBDI01188014;XR_264882 MODEL 39133462 snrna U4 U4 spliceosomal RNA 8818979 protein-coding LOC102021976 pyrethroid hydrolase Ces2e-like NW_004955484 9720410 9750518 - 102021976 AGCD01058425;AGCD01058426;AGCD01058427;XM_005403717 XP_005403774 MODEL 8874082 protein-coding Etv2 ETS variant transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN blastocyst development (ortholog); blood vessel morphogenesis (ortholog); BMP signaling pathway (ortholog); ASSOCIATED WITH Aortic Remodeling (ortholog); hypoplastic left heart syndrome (ortholog); limb ischemia (ortholog) NW_004955468 4857023 4859926 + 102026095 AGCD01051923;GBDF01048409;XM_013522386 XP_013377840 MODEL 8919405 protein-coding Tbr1 T-box brain transcription factor 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN amygdala development (ortholog); cerebral cortex development (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH atrial heart septal defect (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN nucleus (ortholog) NW_004955449 12293534 12301440 - 102026695 AGCD01042110;AGCD01042111;GBDF01079297;XM_005393431 XP_005393488 MODEL 9042516 pseudo LOC102012474 39S ribosomal protein L18, mitochondrial pseudogene NW_004955540 2266992 2270829 - 102012474 AGCD01071316 MODEL 8827000 protein-coding Slc17a1 solute carrier family 17 member 1 ENCODES a protein that exhibits sodium:phosphate symporter activity (ortholog); INVOLVED IN sodium-dependent phosphate transport (ortholog); urate metabolic process (ortholog); urate transport (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog) NW_004955483 1269153 1296329 + 102029082 AGCD01057645;GBDF01022721;XM_005403339;XM_005403340;XM_005403341;XM_013503757 XP_005403396;XP_005403397;XP_005403398;XP_013359211 MODEL 39132394 snrna U6 U6 spliceosomal RNA 8967243 protein-coding LOC102004444 beta-defensin 1-like ENCODES a protein that exhibits double-stranded DNA binding; CCR6 chemokine receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN killing of cells of another organism; antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); calcium-mediated signaling (ortholog); ASSOCIATED WITH otitis media; Actinobacillus Infections (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog); microvesicle (ortholog) NW_004955403 53643328 53644361 + 102004444 AGCD01003067;AY128668;GBDI01106599;XM_005373833 AAM97293;P83943;XP_005373890 MODEL 8914907 ncrna LOC102014006 uncharacterized LOC102014006 NW_004955405 33602692 33668908 + 102014006 AGCD01005360;GBDF01094861;XR_001236072;XR_259427 MODEL 9012675 ncrna LOC102017839 uncharacterized LOC102017839 NW_004955405 39617278 39622813 - 102017839 AGCD01005502;GBDF01252390;XR_001235917 MODEL 8720862 protein-coding Tnfrsf14 TNF receptor superfamily member 14 ENCODES a protein that exhibits cytokine binding (ortholog); receptor ligand activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); negative regulation of adaptive immune memory response (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); Brain Injuries (ortholog); celiac disease (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog); plasma membrane protein complex (ortholog) NW_004955486 8670182 8684677 - 102005150 AGCD01059153;GBCE01053037;XM_005404162;XM_005404163;XM_013504242;XM_013504243;XM_013504244;XM_013504245;XM_013504246 XP_005404219;XP_005404220;XP_013359696;XP_013359697;XP_013359698;XP_013359699;XP_013359700 MODEL 8745669 pseudo LOC102018653 uncharacterized protein C1orf131 homolog pseudogene NW_004955551 792384 801724 - 102018653 AGCD01072674;AGCD01072675 MODEL 8893266 ncrna LOC102021250 uncharacterized LOC102021250 NW_004955422 19299181 19314130 - 102021250 AGCD01022997;AGCD01022998;GBDJ01376834;XR_260898 MODEL 8818133 protein-coding Kdm1b lysine demethylase 1B ENCODES a protein that exhibits FAD binding (ortholog); FAD-dependent H3K4me/H3K4me3 demethylase activity (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN epigenetic programing of female pronucleus (ortholog); genomic imprinting (ortholog); transcription initiation-coupled chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH atrial fibrillation (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleoplasm (ortholog) NW_004955483 8000862 8052486 - 102018602 AGCD01057823;GBCE01175840;GBDF01004261;XM_005403391 XP_005403448 MODEL 8836665 pseudo LOC102003366 protein archease pseudogene NW_004955513 4104178 4104694 + 102003366 AGCD01066919 MODEL 9060518 protein-coding Dlg4 discs large MAGUK scaffold protein 4 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); beta-1 adrenergic receptor binding (ortholog); beta-2 adrenergic receptor binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); cellular response to potassium ion (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cell junction (ortholog); cell periphery (ortholog) NW_004955467 9691733 9715872 + 102028518 AGCD01051521;GBDF01116423;XM_005399548;XM_005399550;XM_005399551;XM_005399553;XM_005399554;XM_005399555;XM_005399556;XM_013522090;XM_013522091;XM_013522092;XM_013522094 XP_005399605;XP_005399607;XP_005399608;XP_005399610;XP_005399611;XP_005399612;XP_005399613;XP_013377544;XP_013377545;XP_013377546;XP_013377548 MODEL 9012088 protein-coding Bloc1s3 biogenesis of lysosomal organelles complex 1 subunit 3 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); transmembrane protein transporter activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); blood coagulation (ortholog); ASSOCIATED WITH Albinism (ortholog); genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-1 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955555 2183752 2186154 + 102022235 AGCD01073131;AGCD01073132;GBBH01208027;GBDK01228953;XM_013508764 XP_013364218 MODEL 9015181 protein-coding Lhfpl5 LHFPL tetraspan subfamily member 5 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 67 (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog); stereocilium bundle (ortholog) NW_004955437 3644448 3650688 + 102013214 AGCD01034330;XM_013516732 XP_013372186 MODEL 730469453 scarna SCARNA2 Small Cajal body-specific RNA 2 9030494 protein-coding S100a3 S100 calcium binding protein A3 ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); prostate cancer (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955545 195834 205442 - 102012686 AGCD01071776;GBDJ01404708;XM_005411412;XM_005411413;XM_013508202;XM_013508203;XM_013508204 XP_005411469;XP_005411470;XP_013363656;XP_013363657;XP_013363658 MODEL 8853422 protein-coding Fgf20 fibroblast growth factor 20 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor-receptor interaction (ortholog); INVOLVED IN cell differentiation (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); inner ear receptor cell differentiation (ortholog); ASSOCIATED WITH Renal Hypodysplasia/Aplasia 2 (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955463 528651 536927 + 102010780 AGCD01049488;XM_005398339 XP_005398396 MODEL 8924631 pseudo LOC102015908 syntenin-1 pseudogene NW_004955402 63207510 63211180 + 102015908 AGCD01001665 MODEL 9056976 protein-coding Wt1 WT1 transcription factor ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adrenal cortex formation (ortholog); adrenal gland development (ortholog); apoptotic process (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955476 10464688 10504473 - 102010054 AGCD01055423;GBDJ01006823;GBDJ01006829;XM_005401901;XM_013503000;XM_013503001;XM_013503002 XP_005401958;XP_013358454;XP_013358455;XP_013358456 MODEL 8725212 protein-coding Sugp2 SURP and G-patch domain containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955524 2710656 2731849 + 102005959 AGCD01068830;GBDF01006925;GBDF01006928;XM_013507220 XP_013362674 MODEL 39133104 snrna U6 U6 spliceosomal RNA 8945117 pseudo LOC102009643 tubulin alpha-1C chain-like NW_004955515 4374447 4376136 + 102009643 AGCD01067319 MODEL 8813902 protein-coding Gas2l3 growth arrest specific 2 like 3 ENCODES a protein that exhibits actin binding (ortholog); microtubule binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); microtubule cytoskeleton organization (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); microtubule cytoskeleton (ortholog) NW_004955405 36247179 36278889 + 102022997 AGCD01005413;GBDF01249975;XM_005374538;XM_013518650;XM_013518654 XP_005374595;XP_013374104;XP_013374108 MODEL 8954642 protein-coding Qpctl glutaminyl-peptide cyclotransferase like ENCODES a protein that exhibits glutaminyl-peptide cyclotransferase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN protein maturation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955574 165031 172713 + 102017522 AGCD01075088;GBDF01222689;XM_005413799;XM_013509513;XM_013509514 XP_005413856;XP_013364967;XP_013364968 MODEL 8938501 protein-coding Tshb thyroid stimulating hormone subunit beta INVOLVED IN response to calcium ion (ortholog); response to estrogen (ortholog); response to vitamin A (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Coma (ortholog); congenital nongoitrous hypothyroidism 4 (ortholog); FOUND IN cytoplasm (ortholog) NW_004955435 18316585 18339935 + 102023390 AGCD01033400;AGCD01033401;AGCD01033402;AGCD01033403;GBDF01010175;XM_005389018;XM_005389019;XM_013516550 XP_005389075;XP_005389076;XP_013372004 MODEL 8770067 protein-coding Shtn1 shootin 1 ENCODES a protein that exhibits actin filament binding (ortholog); cell adhesion molecule binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament bundle retrograde transport (ortholog); axonogenesis (ortholog); Cdc42 protein signal transduction (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); cell leading edge (ortholog) NW_004955431 21653415 21734160 - 102027776 AGCD01030496;GBCQ01149394;XM_005387870;XM_013515871 XP_005387927;XP_013371325 MODEL 8719739 protein-coding LOC102005152 olfactory receptor 2A2-like NW_004955491 447741 450169 + 102005152 AGCD01060335;XM_005404725 XP_005404782 MODEL 8836685 protein-coding CUNH5orf34 chromosome unknown C5orf34 homolog ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955446 18837488 18862396 + 102003916 AGCD01040415;GBDF01195920;XM_005392740;XM_005392741 XP_005392797;XP_005392798 MODEL 8835927 protein-coding Gipc3 GIPC PDZ domain containing family member 3 ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 15 (ortholog); genetic disease (ortholog) NW_004955495 5531374 5536691 + 102003253 AGCD01062010;AGCD01062011;GBBH01075042;GBDK01319308;XM_013505214 XP_013360668 MODEL 8965988 ncrna LOC102010413 uncharacterized LOC102010413 NW_004955440 18515406 18523978 + 102010413 AGCD01036611;AGCD01036612;GBDI01160681;XR_262044 MODEL 9039477 ncrna LOC102007724 uncharacterized LOC102007724 NW_004955403 45845767 45849351 - 102007724 AGCD01002838;GBDF01008253;XR_259240 MODEL 39133012 snrna U6 U6 spliceosomal RNA 8741657 protein-coding Etv3l ETS variant transcription factor 3 like ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); urinary bladder cancer (ortholog) NW_004955545 3121363 3132748 - 102017507 AGCD01071933;GBDI01354928;XM_005411734;XM_013508351;XM_013508352;XM_013508353;XM_013508354;XM_013508355;XM_013508356;XM_013508357;XR_001232196 XP_005411791;XP_013363805;XP_013363806;XP_013363807;XP_013363808;XP_013363809;XP_013363810;XP_013363811 MODEL 8783881 protein-coding LOC102023014 phosphatidylinositol 3-kinase regulatory subunit gamma NW_004955464 12100598 12260750 + 102023014 AGCD01050180;AGCD01050181;AGCD01050182;AGCD01050183;AGCD01050184;AGCD01050185;AGCD01050186;AGCD01050187;AGCD01050188;AGCD01050189;GBDF01007439;XM_005398685;XM_005398686;XM_013521606;XM_013521607 XP_005398742;XP_005398743;XP_013377060;XP_013377061 MODEL 8866803 protein-coding Tada1 transcriptional adaptor 1 ENCODES a protein that exhibits transcription coactivator activity (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); SAGA complex (ortholog) NW_004955462 10057468 10073871 + 102028065 AGCD01049350;AGCD01049351;GBDF01082667;XM_005398237;XM_013521452 XP_005398294;XP_013376906 MODEL 10309218 protein-coding LOC106147285 translation initiation factor IF-2-like NW_004955408 781616 784259 + 106147285 AGCD01007933;GBCE01141784;GBCQ01151059;XM_013507907 XP_013363361 MODEL 8787079 pseudo LOC102009267 60S ribosomal protein L7a pseudogene NW_004955467 9883721 9884522 + 102009267 AGCD01051535 MODEL 8987713 protein-coding LOC102015912 acyl-protein thioesterase 1-like NW_004955451 16240608 16241441 + 102015912 AGCD01043662;XM_005394451;XM_005394452 XP_005394508;XP_005394509 MODEL 8792231 protein-coding Lrrc43 leucine rich repeat containing 43 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog) NW_004955482 6366437 6375697 - 102029516 AGCD01057388;GBCE01085230;GBDF01081449;XM_013503751;XM_013503752;XR_001231000 XP_013359205;XP_013359206 MODEL 39132727 snrna U6 U6 spliceosomal RNA 8893093 ncrna LOC102014009 uncharacterized LOC102014009 NW_004955406 20130414 20137527 - 102014009 AGCD01006098;GBDF01144134;XR_259501 MODEL 39132396 snrna U6 U6 spliceosomal RNA 9049307 ncrna LOC102017844 uncharacterized LOC102017844 NW_004955407 37132665 37188696 - 102017844 AGCD01007778;AGCD01007779;GBDF01281780;XR_001231639;XR_001231640;XR_001231642;XR_259617 MODEL 8803940 protein-coding Tex13c TEX13 family member C NW_004955473 9425572 9428326 - 102028852 AGCD01054074;GBDF01079065;XM_005401296 XP_005401353 MODEL 8935752 protein-coding Slc67a1 solute carrier family 67 member 1 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN xenobiotic detoxification by transmembrane export across the plasma membrane (ortholog); xenobiotic transport (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); nuclear envelope (ortholog) NW_004955422 14590588 14615898 + 102010702 AGCD01022861;GBDJ01137383;XM_005384209;XM_005384210;XM_005384211;XM_005384212;XM_013514291 XP_005384266;XP_005384267;XP_005384268;XP_005384269;XP_013369745 MODEL 8811717 protein-coding Kdm2a lysine demethylase 2A ENCODES a protein that exhibits histone H3K36 demethylase activity (ortholog); histone H3K36me/H3K36me2 demethylase activity (ortholog); unmethylated CpG binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); double-strand break repair via nonhomologous end joining (ortholog); heart looping (ortholog); PARTICIPATES IN DNA modification pathway; histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleoplasm (ortholog) NW_004955422 18201243 18308163 - 102026015 AGCD01022941;AGCD01022942;AGCD01022943;AGCD01022944;GBDI01113489;GBDI01224165;XM_005384357;XM_005384358 XP_005384414;XP_005384415 MODEL 8843888 pseudo LOC102012843 T-complex protein 1 subunit alpha pseudogene NW_004955466 3144704 3150696 - 102012843 AGCD01050787 MODEL 8953987 protein-coding Smim1 small integral membrane protein 1 (Vel blood group) ENCODES a protein that exhibits protein homodimerization activity (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955486 7889510 7895281 - 102022928 AGCD01059139;GBDK01081865;XM_005404132;XM_005404133 XP_005404189;XP_005404190 MODEL 8982339 protein-coding Gsg1l GSG1 like INVOLVED IN regulation of postsynaptic neurotransmitter receptor internalization (ortholog); regulation of short-term neuronal synaptic plasticity (ortholog); synapse organization (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN asymmetric synapse (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955493 5923154 6070909 - 102008865 AGCD01061080;AGCD01061081;AGCD01061082;GBBH01148283;XM_005405143;XM_005405144;XM_005405145 XP_005405200;XP_005405201;XP_005405202 MODEL 39133463 snrna U4 U4 spliceosomal RNA 8828056 protein-coding Kyat1 kynurenine aminotransferase 1 ENCODES a protein that exhibits cysteine-S-conjugate beta-lyase activity (ortholog); L-glutamine:phenylpyruvate transaminase activity (ortholog); L-kynurenine:2-oxoglutarate transaminase activity (ortholog); INVOLVED IN pyruvate catabolic process (ortholog); response to bacterium (ortholog); PARTICIPATES IN kynurenine metabolic pathway; ASSOCIATED WITH carcinoma (ortholog); Experimental Arthritis (ortholog); Kidney Neoplasms (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955570 1211950 1260561 - 102010002 AGCD01074799;AGCD01074800;AGCD01074801;AGCD01074802;AGCD01074803;AGCD01074804;AGCD01074805;AGCD01074806;GBDF01082429;XM_005413589;XM_005413590;XM_013509435;XM_013509436 XP_005413646;XP_005413647;XP_013364889;XP_013364890 MODEL 8788473 protein-coding Tubb6 tubulin beta 6 class V ASSOCIATED WITH congenital facial palsy with ptosis and velopharyngeal dysfunction (ortholog); Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); FOUND IN microtubule (ortholog) NW_004955402 1071135 1081385 - 102013231 AGCD01000046;GBDJ01221777;XM_005372569;XM_005372572 XP_005372626;XP_005372629 MODEL 9042676 ncrna LOC102021977 uncharacterized LOC102021977 NW_004955486 3990448 3991077 + 102021977 AGCD01059050;GBDF01308051;XR_263950 MODEL 8917095 protein-coding LOC102025147 mannose-binding protein A-like NW_004955510 239781 243643 - 102025147 AGCD01066142;GBDF01235188;XM_005407864;XM_005407865;XM_013506332 XP_005407921;XP_005407922;XP_013361786 MODEL 126903058 scarna SCARNA2 small Cajal body-specific RNA 2 8982998 pseudo LOC102012478 60S ribosomal protein L39 pseudogene NW_004955442 7979367 7988554 - 102012478 AGCD01037634;AGCD01037635;XM_005391201;XM_005391202 MODEL 9013291 protein-coding Dtwd1 DTW motif tRNA-uridine aminocarboxypropyltransferase 1 ENCODES a protein that exhibits tRNA-uridine aminocarboxypropyltransferase activity (ortholog); INVOLVED IN tRNA modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955409 4550906 4568484 - 102009021 AGCD01009292;GBCQ01127324;XM_005376691;XM_005376693;XM_013510297 XP_005376748;XP_005376750;XP_013365751 MODEL 8901604 protein-coding Slc17a2 solute carrier family 17 member 2 ENCODES a protein that exhibits sodium:phosphate symporter activity (ortholog); urate transmembrane transporter activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); liver cirrhosis (ortholog); FOUND IN apical plasma membrane (ortholog) NW_004955483 1185775 1201851 + 102027187 AGCD01057644;XM_005403332;XM_005403333;XM_005403334 XP_005403389;XP_005403390;XP_005403391 MODEL 730469195 misc_rna WT1-AS_3 WT1 antisense RNA conserved region 3 8884753 protein-coding S100a4 S100 calcium binding protein A4 ENCODES a protein that exhibits actin binding (ortholog); calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); clear cell renal cell carcinoma (ortholog); Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nucleoplasm (ortholog) NW_004955545 192236 194468 - 102012128 AGCD01071776;GBCE01002936;XM_005411410 XP_005411467 MODEL 9010183 protein-coding LOC102003706 WAP four-disulfide core domain protein 6A-like NW_004955445 11697127 11701399 + 102003706 AGCD01039713;GBDF01265082;XM_005392421 XP_005392478 MODEL 8952236 ncrna LOC102015917 uncharacterized LOC102015917 NW_004955452 10492790 10517508 - 102015917 AGCD01044277;AGCD01044278;GBDF01085013;XR_262675 MODEL 8750726 pseudo LOC102021251 60S ribosomal protein L23a pseudogene NW_004955493 6861814 6862285 + 102021251 AGCD01061146 MODEL 8988003 protein-coding Gas6 growth arrest specific 6 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); phosphatidylserine binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); apoptotic cell clearance (ortholog); B cell chemotaxis (ortholog); PARTICIPATES IN Gas6 - Axl signaling axis; ASSOCIATED WITH acute kidney failure (ortholog); adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955404 276397 303864 + 102028606 AGCD01003198;GBDK01013497;XM_005373932;XM_005373933 XP_005373989;XP_005373990 MODEL 8713119 ncrna LOC102003369 uncharacterized LOC102003369 NW_004955518 211147 307647 + 102003369 AGCD01067721;AGCD01067722;AGCD01067723;AGCD01067724;AGCD01067725;AGCD01067726;AGCD01067727;GBDF01095069;XR_001231851;XR_001231852 MODEL 8942634 protein-coding LOC102019025 zinc finger protein 14-like NW_004955454 7269898 7274969 + 102019025 AGCD01045291;GBDF01011085;XM_013520194;XM_013520195;XM_013520196;XM_013520197 XP_013375648;XP_013375649;XP_013375650;XP_013375651 MODEL 8705394 protein-coding Il10 interleukin 10 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-10 receptor binding (ortholog); protein dimerization activity (ortholog); INVOLVED IN branching involved in labyrinthine layer morphogenesis (ortholog); cellular response to antibiotic (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Actinic Cheilitis (ortholog); Acute Experimental Pancreatitis (ortholog); FOUND IN extracellular region (ortholog); interleukin-10 receptor complex (ortholog) NW_004955406 42307789 42312255 - 102022355 AGCD01006700;GBDJ01151912;XM_005375404 XP_005375461 MODEL 8830067 protein-coding Dlg5 discs large MAGUK scaffold protein 5 ENCODES a protein that exhibits beta-catenin binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN apical protein localization (ortholog); epithelial to mesenchymal transition (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); cell junction (ortholog) NW_004955437 14510488 14628768 + 102021484 AGCD01034676;AGCD01034677;AGCD01034678;GBBH01115032;GBDF01192616;XM_005389900;XM_005389902 XP_005389957;XP_005389959 MODEL 39131451 protein-coding LHFPL5 LHFPL tetraspan subfamily member 5 8825774 protein-coding Tbrg1 transforming growth factor beta regulator 1 INVOLVED IN DNA replication (ortholog); negative regulation of cell population proliferation (ortholog); protein localization to nucleoplasm (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); intellectual disability (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955412 25686105 25713363 + 102012298 AGCD01013170;AGCD01013171;GBCQ01125720;XM_005378434;XM_005378435;XM_013511070;XM_013511071;XM_013511072;XM_013511073 XP_005378491;XP_005378492;XP_013366524;XP_013366525;XP_013366526;XP_013366527 MODEL 9041653 protein-coding Si sucrase-isomaltase ENCODES a protein that exhibits alpha-1,4-glucosidase activity (ortholog); beta-fructofuranosidase activity (ortholog); oligo-1,6-glucosidase activity (ortholog); INVOLVED IN carbohydrate utilization (ortholog); intestinal epithelial cell maturation (ortholog); response to cortisone (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen storage disease type III pathway; glycogen storage disease type IV pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colitis (ortholog); congenital sucrase-isomaltase deficiency (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) NW_004955448 14686315 14777298 - 102009668 AGCD01041642;AGCD01041643;AGCD01041644;AGCD01041645;GBCQ01066789;XM_005393136 XP_005393193 MODEL 8889750 protein-coding LOC102010423 olfactory receptor 7G2-like NW_004955563 285695 286633 - 102010423 AGCD01074059;XM_013509134 XP_013364588 MODEL 8854344 protein-coding Fgf21 fibroblast growth factor 21 INVOLVED IN cellular response to glucagon stimulus (ortholog); cellular response to glucose stimulus (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); Cardiomegaly (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955559 1818400 1821423 - 102004527 AGCD01073671;GBDF01061434;XM_013508993;XM_013508994 XP_013364447;XP_013364448 MODEL 8763736 protein-coding Gipr gastric inhibitory polypeptide receptor ENCODES a protein that exhibits gastric inhibitory peptide receptor activity (ortholog); glucagon family peptide binding (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); desensitization of G protein-coupled receptor signaling pathway (ortholog); endocrine pancreas development (ortholog); ASSOCIATED WITH Body Weight (ortholog); Breast Cancer, Familial (ortholog); cardiovascular system disease (ortholog); FOUND IN plasma membrane (ortholog) NW_004955574 140307 153684 + 102015255 AGCD01075086;GBDK01050785;XM_013509505;XM_013509506;XM_013509507;XM_013509508;XM_013509509;XM_013509510;XM_013509511;XM_013509512;XR_001232446;XR_001232447 XP_013364959;XP_013364960;XP_013364961;XP_013364962;XP_013364963;XP_013364964;XP_013364965;XP_013364966 MODEL 8732046 protein-coding LOC102004445 collagen alpha-1(II) chain NW_004955404 512703 521797 + 102004445 AGCD01003202;GBCE01072410;XM_005373945 XP_005374002 MODEL 8813001 protein-coding LOC102020146 ligand-dependent corepressor NW_004955507 3039562 3195267 + 102020146 AGCD01065610;AGCD01065611;AGCD01065612;AGCD01065613;GBDF01088445;XM_005407585;XM_005407589;XM_005407590;XM_005407591;XM_005407592;XM_005407593;XM_013506199;XM_013506200;XM_013506201 XP_005407642;XP_005407646;XP_005407647;XP_005407648;XP_005407649;XP_005407650;XP_013361653;XP_013361654;XP_013361655 MODEL 39133105 snrna U6 U6 spliceosomal RNA 9017245 pseudo LOC102018657 cryptochrome-1-like NW_004955555 1524678 1525436 - 102018657 AGCD01073085 MODEL 8885525 protein-coding LOC102009273 tripartite motif-containing protein 34 NW_004955414 21592178 21600802 + 102009273 AGCD01015423;AGCD01015424;GBDI01215595;XM_005380097;XM_005380098;XM_013512000;XM_013512001 XP_005380154;XP_005380155;XP_013367454;XP_013367455 MODEL 8824622 pseudo LOC102009644 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955516 2584233 2584809 - 102009644 AGCD01067462 MODEL 8853230 protein-coding Lrrc45 leucine rich repeat containing 45 INVOLVED IN cilium assembly (ortholog); protein localization to centriolar satellite (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955506 1142090 1149502 - 102019515 AGCD01065247;XM_005407229;XM_013506043;XM_013506044 XP_005407286;XP_013361497;XP_013361498 MODEL 9049585 protein-coding Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); melanosome organization (ortholog); ASSOCIATED WITH Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-1 complex (ortholog); cytoplasm (ortholog) NW_004955514 3698644 3699227 - 102008971 AGCD01067105;GBCE01116712;GBDF01001526;XM_013506813 XP_013362267 MODEL 8981513 protein-coding LOC102003707 vomeronasal type-1 receptor 2-like NW_004955569 1079109 1080002 - 102003707 AGCD01074636;XM_013509364 XP_013364818 MODEL 8888053 protein-coding S100a5 S100 calcium binding protein A5 ENCODES a protein that exhibits calcium ion binding (ortholog); copper ion binding (ortholog); protein homodimerization activity (ortholog); ASSOCIATED WITH middle cerebral artery infarction (ortholog); FOUND IN neuronal cell body (ortholog); nucleus (ortholog) NW_004955545 187159 190399 - 102011149 AGCD01071776;GBBH01139402;XM_005411406;XM_005411407;XM_005411408;XM_005411409 XP_005411463;XP_005411464;XP_005411465;XP_005411466 MODEL 9035741 protein-coding Tshr thyroid stimulating hormone receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); protein-containing complex binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH adenoma (ortholog); Adrenal Gland Neoplasms (ortholog); autoimmune thyroiditis (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955438 4601765 4758922 + 102024276 AGCD01035046;AGCD01035047;AGCD01035048;GBDF01190268;XM_005390231;XM_005390232;XM_005390233;XM_013517232;XM_013517233 XP_005390288;XP_005390289;XP_005390290;XP_013372686;XP_013372687 MODEL 9024939 protein-coding LOC102012844 polycystic kidney disease protein 1-like 2 NW_004955413 408570 412526 + 102012844 AGCD01013464;GBDJ01203527;XM_005378678;XM_013511472 XP_005378735;XP_013366926 MODEL 9056474 protein-coding Kdm2b lysine demethylase 2B ENCODES a protein that exhibits histone H3K36 demethylase activity (ortholog); histone H3K36me/H3K36me2 demethylase activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); embryonic camera-type eye morphogenesis (ortholog); forebrain development (ortholog); PARTICIPATES IN DNA modification pathway; histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955482 6774021 6885113 + 102013610 AGCD01057416;AGCD01057417;AGCD01057418;AGCD01057419;AGCD01057420;AGCD01057421;AGCD01057422;AGCD01057423;GBBH01117985;XM_005403116;XM_005403117;XM_005403118;XM_005403119;XM_005403120;XM_005403121;XM_005403122;XM_005403124;XM_005403125;XM_005403126;XM_005403127;XM_005403128;XM_005403129;XM_013503691;XM_013503692 XP_005403173;XP_005403174;XP_005403175;XP_005403176;XP_005403177;XP_005403178;XP_005403179;XP_005403181;XP_005403182;XP_005403183;XP_005403184;XP_005403185;XP_005403186;XP_013359145;XP_013359146 MODEL 8725005 protein-coding LOC102025149 olfactory receptor 1013-like NW_004955511 1785957 1786877 + 102025149 AGCD01066380;XM_005408244 XP_005408301 MODEL 9002250 protein-coding LOC102007725 ubiquitin carboxyl-terminal hydrolase 16-like NW_004957393 10 1496 + 102007725 AGCD01080789;GBCC01037265;XM_013510251 XP_013365705 MODEL 730469161 scarna SCARNA20 Small Cajal body specific RNA 20 39133013 snrna U6 U6 spliceosomal RNA 8704359 protein-coding LOC102012479 uncharacterized LOC102012479 NW_004955559 461354 469388 - 102012479 AGCD01073586;GBDK01094411;XM_013508927;XM_013508928;XM_013508929;XM_013508930;XM_013508931;XM_013508932;XM_013508933;XM_013508934 XP_013364381;XP_013364382;XP_013364383;XP_013364384;XP_013364385;XP_013364386;XP_013364387;XP_013364388 MODEL 10320420 ncrna LOC106147286 uncharacterized LOC106147286 NW_004955538 3403031 3406457 + 106147286 AGCD01071162;GBBH01007939;XR_001232101 MODEL 8826609 protein-coding Sugt1 SGT1 assembly cochaperone of MIS12 kinetochore complex ENCODES a protein that exhibits lncRNA binding (ortholog); INVOLVED IN kinetochore assembly (ortholog); regulation of protein stability (ortholog); skeletal muscle satellite cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); kinetochore (ortholog) NW_004955404 50916715 50947619 - 102010764 AGCD01004541;GBCB01024281;XM_005374216;XM_013516759 XP_005374273;XP_013372213 MODEL 8834197 protein-coding Slc17a3 solute carrier family 17 member 3 ENCODES a protein that exhibits efflux transmembrane transporter activity (ortholog); toxin transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN transmembrane transport (ortholog); urate metabolic process (ortholog); urate transport (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); gout (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955483 1235122 1260161 + 102028541 AGCD01057644;GBCQ01036124;XM_005403337;XM_005403338 XP_005403394;XP_005403395 MODEL 39132728 snrna U6 U6 spliceosomal RNA 8804392 pseudo LOC102017846 heat shock cognate 71 kDa protein-like NW_004955407 35524223 35534029 - 102017846 AGCD01007744;AGCD01007745 MODEL 8781200 ncrna LOC102005154 uncharacterized LOC102005154 NW_004955493 5108829 5118871 - 102005154 AGCD01061059;GBDF01187998;XR_264083 MODEL 8798788 pseudo LOC102019026 poly(rC)-binding protein 1-like NW_004955454 7523214 7539387 - 102019026 AGCD01045300;AGCD01045301 MODEL 9030165 protein-coding LOC102021253 zinc finger protein 426 NW_004955495 883506 889089 - 102021253 AGCD01061658;AGCD01061659;AGCD01061660;GBCE01152430;GBDI01011093;XM_013505048 XP_013360502 MODEL 9047459 protein-coding Smim10l1 small integral membrane protein 10 like 1 FOUND IN mitochondrion (ortholog) NW_004955413 8350480 8353727 + 102011524 AGCD01013859;GBCE01075120;XM_005378947 XP_005379004 MODEL 9068204 pseudo LOC102021979 26S proteasome non-ATPase regulatory subunit 14 pseudogene NW_004955488 2643464 2644330 - 102021979 AGCD01059549 MODEL 8870193 protein-coding Il10ra interleukin 10 receptor subunit alpha ENCODES a protein that exhibits interleukin-10 binding (ortholog); interleukin-10 receptor activity (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to virus (ortholog); hepatic stellate cell activation (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; ASSOCIATED WITH cerebral degeneration (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN apical plasma membrane (ortholog); C-fiber (ortholog); cytoplasm (ortholog) NW_004955412 19182536 19197083 + 102004584 AGCD01012950;GBDK01061604;XM_005378226 XP_005378283 MODEL 8922566 protein-coding Kyat3 kynurenine aminotransferase 3 ENCODES a protein that exhibits cysteine-S-conjugate beta-lyase activity (ortholog); L-kynurenine:2-oxoglutarate transaminase activity (ortholog); L-kynurenine:glyoxylate transaminase activity (ortholog); INVOLVED IN kynurenic acid biosynthetic process (ortholog); L-tryptophan catabolic process (ortholog); pyruvate catabolic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955423 5340863 5388460 + 102014918 AGCD01023560;GBCQ01007721;XM_005385107;XM_005385108;XM_005385109;XM_005385110;XM_005385111;XM_005385112 XP_005385164;XP_005385165;XP_005385166;XP_005385167;XP_005385168;XP_005385169 MODEL 8832611 protein-coding Tnfrsf17 TNF receptor superfamily member 17 INVOLVED IN lymphocyte homeostasis (ortholog); ASSOCIATED WITH colon carcinoma (ortholog); COVID-19 (ortholog); multiple myeloma (ortholog) NW_004955442 6626434 6651193 - 102023531 AGCD01037591;AGCD01037592;GBDK01160382;XM_005391151 XP_005391208 MODEL 730469308 misc_rna WT1-AS_7 WT1 antisense RNA conserved region 7 8875108 protein-coding Tada2a transcriptional adaptor 2A ENCODES a protein that exhibits histone acetyltransferase activity (ortholog); INVOLVED IN chromatin organization (ortholog); mitotic cell cycle (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN ATAC complex (ortholog); mitotic spindle (ortholog); nucleus (ortholog) NW_004955451 548373 599739 - 102026378 AGCD01042940;AGCD01042941;GBDF01279468;XM_005393934;XM_005393935;XM_005393936;XM_013519173 XP_005393991;XP_005393992;XP_005393993;XP_013374627 MODEL 8744904 ncrna LOC102014010 uncharacterized LOC102014010 NW_004955407 2961065 2985825 - 102014010 AGCD01006845;AGCD01006846;AGCD01006847;AGCD01006848;XR_259544 MODEL 8853448 protein-coding Qprt quinolinate phosphoribosyltransferase ENCODES a protein that exhibits identical protein binding (ortholog); nicotinate-nucleotide diphosphorylase (carboxylating) activity (ortholog); INVOLVED IN 'de novo' NAD+ biosynthetic process from L-tryptophan (ortholog); NAD+ biosynthetic process (ortholog); quinolinate catabolic process (ortholog); PARTICIPATES IN de novo nicotinamide adenine dinucleotide biosynthetic pathway; niacin metabolic pathway; ASSOCIATED WITH Huntington's disease (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN catalytic complex (ortholog); cytosol (ortholog) NW_004955493 7225472 7243078 - 102011554 AGCD01061168;AGCD01061169;AGCD01061170;GBCQ01003527;XM_005405247 XP_005405304 MODEL 8936546 protein-coding Fgf22 fibroblast growth factor 22 INVOLVED IN regulation of synapse maturation (ortholog); trans-synaptic signaling (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); extrinsic component of postsynaptic density membrane (ortholog) NW_004955495 7099616 7102749 - 102022404 AGCD01062118;XM_005406031 XP_005406088 MODEL 8766172 ncrna LOC102004449 uncharacterized LOC102004449 NW_004955405 42046220 42053786 + 102004449 AGCD01005576;GBBH01198079;XR_001235965;XR_259459 MODEL 9039987 ncrna LOC102020147 uncharacterized LOC102020147 NW_004955429 7292109 7331328 + 102020147 AGCD01028588;AGCD01028589;GBDF01110939;XR_261321;XR_261322 MODEL 8776617 protein-coding Nqo2 N-ribosyldihydronicotinamide:quinone dehydrogenase 2 ENCODES a protein that exhibits chloride ion binding (ortholog); dihydronicotinamide riboside quinone reductase activity (ortholog); electron transfer activity (ortholog); INVOLVED IN memory (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH agranulocytosis (ortholog); autism spectrum disorder (ortholog); bone marrow disease (ortholog); FOUND IN cytosol (ortholog) NW_004955465 10186928 10200098 - 102017965 AGCD01050503;GBDJ01093901;XM_005398905;XM_005398906;XM_013521864 XP_005398962;XP_005398963;XP_013377318 MODEL 8823121 pseudo LOC102003373 bile acid receptor-like NW_004955435 18126734 18135541 + 102003373 AGCD01033389;AGCD01033390 MODEL 9007218 protein-coding Tex14 testis expressed 14, intercellular bridge forming factor ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); cellular response to leukemia inhibitory factor (ortholog); intercellular bridge organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN intercellular bridge (ortholog); kinetochore (ortholog); midbody (ortholog) NW_004955451 4206114 4296969 + 102016657 AGCD01043100;AGCD01043101;AGCD01043102;AGCD01043103;AGCD01043104;AGCD01043105;AGCD01043106;GBDF01048867;GBDK01377318;XM_013519211 XP_013374665 MODEL 39131575 protein-coding TSHZ1 teashirt zinc finger homeobox 1 9059877 protein-coding LOC102003708 UDP-glucuronosyltransferase 2B20-like NW_004955447 4180631 4374845 - 102003708 AGCD01040708;AGCD01040709;AGCD01040710;AGCD01040711;AGCD01040712;AGCD01040713;AGCD01040714;AGCD01040715;GBDF01017425;XM_005392805;XM_005392807;XM_005392808 XP_005392862;XP_005392864;XP_005392865 MODEL 8750159 protein-coding Slc67a2 solute carrier family 67 member 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955470 8144065 8164515 - 102030519 AGCD01052819;AGCD01052820;GBBH01155399;GBDJ01214123;XM_013522697 XP_013378151 MODEL 8709084 protein-coding S100a9 S100 calcium binding protein A9 INVOLVED IN actin cytoskeleton organization (ortholog); astrocyte development (ortholog); autocrine signaling (ortholog); ASSOCIATED WITH Acute Otitis Media; adult respiratory distress syndrome (ortholog); celiac disease (ortholog); FOUND IN calprotectin complex (ortholog); cornified envelope (ortholog); cytoplasm (ortholog) NW_004955592 90647 93842 - 102006189 AGCD01076300;GBCC01036093;XM_005414603;XM_013509984 XP_005414660;XP_013365438 MODEL 9056648 protein-coding Lhfpl6 LHFPL tetraspan subfamily member 6 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955431 6745745 6977662 + 102017595 AGCD01030065;AGCD01030066;AGCD01030067;XM_013515896 XP_013371350 MODEL 8811986 protein-coding Tubd1 tubulin delta 1 INVOLVED IN cytoskeleton organization (ortholog); microtubule cytoskeleton organization (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955451 3225728 3249013 + 102011494 AGCD01043048;AGCD01043049;AGCD01043050;GBBH01138856;XM_005393974;XM_005393975;XM_005393976;XM_005393977 XP_005394031;XP_005394032;XP_005394033;XP_005394034 MODEL 9037414 protein-coding Etv4 ETS variant transcription factor 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); motor neuron axon guidance (ortholog); negative regulation of mammary gland epithelial cell proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955451 16965404 16976503 - 102004880 AGCD01043714;AGCD01043715;GBBH01050865;GBBH01050866;XM_013519235;XM_013519236 XP_013374689;XP_013374690 MODEL 8734297 protein-coding Siae sialic acid acetylesterase ENCODES a protein that exhibits sialate O-acetylesterase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); regulation of immune system process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autoimmune disease (ortholog); disease by infectious agent (ortholog); FOUND IN lysosome (ortholog) NW_004955412 25704024 25741646 - 102011521 AGCD01013171;AGCD01013172;AGCD01013173;GBBH01172315;XM_005378431;XM_005378432 XP_005378488;XP_005378489 MODEL 8751896 ncrna LOC102023015 uncharacterized LOC102023015 NW_004955465 3866841 3869578 + 102023015 AGCD01050394;GBDF01077342;XR_263234 MODEL 8830147 protein-coding LOC102021985 GSK-3-binding protein FRAT2 NW_004955422 2871445 2965411 - 102021985 AGCD01022495;AGCD01022496;GBDI01224871;XM_013514199 XP_013369653 MODEL 8891894 protein-coding Dtwd2 DTW motif tRNA-uridine aminocarboxypropyltransferase 2 ENCODES a protein that exhibits tRNA-uridine aminocarboxypropyltransferase activity (ortholog); INVOLVED IN glycoRNA biosynthetic process (ortholog); tRNA modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955408 38497442 38609561 - 102029939 AGCD01009041;AGCD01009042;AGCD01009043;AGCD01009044;AGCD01009045;AGCD01009046;AGCD01009047;GBBH01226018;GBCB01111751;XM_013506983 XP_013362437 MODEL 8877065 ncrna LOC102007728 uncharacterized LOC102007728 NW_004955405 808318 848689 - 102007728 AGCD01004585;AGCD01004586;AGCD01004587;AGCD01004588;GBDF01303416;XR_259358 MODEL 8816544 protein-coding Git1 GIT ArfGAP 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); GTPase activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); cell redox homeostasis (ortholog); cellular response to epidermal growth factor stimulus (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN calyx of Held (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955481 3671728 3681279 + 102009945 AGCD01056911;GBBH01064442;XM_005402676 XP_005402733 MODEL 39132398 snrna U6 U6 spliceosomal RNA 39133106 snrna U6 U6 spliceosomal RNA 8857758 pseudo LOC102015923 homeobox protein Meis2 pseudogene NW_004955407 24891666 24892871 + 102015923 AGCD01007485;XR_259579 MODEL 10288231 ncrna LOC106147287 uncharacterized LOC106147287 NW_004955539 1485982 1511602 - 106147287 AGCD01071206;XR_001232110 MODEL 8816539 pseudo LOC102009646 60S ribosomal protein L39 pseudogene NW_004955520 1114140 1114853 + 102009646 AGCD01068043;XM_005409228 MODEL 8866887 protein-coding Slc17a4 solute carrier family 17 member 4 ENCODES a protein that exhibits sodium:phosphate symporter activity (ortholog); thyroid hormone transmembrane transporter activity (ortholog); urate transmembrane transporter activity (ortholog); INVOLVED IN sodium-dependent phosphate transport (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog) NW_004955483 1307081 1345962 - 102029969 AGCD01057645;GBCQ01012294;XM_005403342;XM_013503755 XP_005403399;XP_013359209 MODEL 8993830 protein-coding Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); developmental pigmentation (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); Hermansky-Pudlak syndrome (ortholog); Hermansky-Pudlak syndrome 11 (ortholog); FOUND IN BLOC-1 complex (ortholog); microvesicle (ortholog); transport vesicle (ortholog) NW_004955465 5910095 5943996 + 102025889 AGCD01050435;AGCD01050436;GBCQ01069346;XM_005398846;XM_005398848 XP_005398903;XP_005398905 MODEL 9031868 pseudo LOC102017847 E3 ubiquitin-protein ligase XIAP pseudogene NW_004955458 3142433 3143246 + 102017847 AGCD01047274 MODEL 39133464 snrna U4 U4 spliceosomal RNA 10065060 protein-coding Gsg1l2 GSG1 like 2 NW_004955467 7308935 7323266 + 106150178 AGCD01051433;XM_013522037 XP_013377491 MODEL 9047550 protein-coding Tbrg4 transforming growth factor beta regulator 4 INVOLVED IN mitochondrial mRNA processing (ortholog); mRNA metabolic process (ortholog); regulation of mitochondrial mRNA stability (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955456 7197690 7207102 + 102014743 AGCD01046395;GBDF01080359;XM_005396647 XP_005396704 MODEL 8905044 pseudo LOC102010427 signal recognition particle subunit SRP72-like NW_004955569 166179 187432 - 102010427 AGCD01074565;AGCD01074566 MODEL 8832920 protein-coding CUNH5orf46 chromosome unknown C5orf46 homolog ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Hereditary Neoplastic Syndromes (ortholog); sarcoma (ortholog) NW_004955415 6312822 6317652 + 102010151 AGCD01016014;GBCE01159697;XM_005380651 XP_005380708 MODEL 730469194 scarna SCARNA20 Small Cajal body specific RNA 20 39132852 snrna U6 U6 spliceosomal RNA 8918957 pseudo LOC102012481 uncharacterized LOC102012481 NW_004955446 7640915 7696303 + 102012481 AGCD01040126;AGCD01040127;AGCD01040128 MODEL 730469173 misc_rna WT1-AS_8 WT1 antisense RNA conserved region 8 8815252 ncrna LOC102018669 uncharacterized LOC102018669 NW_004955450 1821752 1837551 + 102018669 AGCD01042371;GBDF01222200;XR_001235919;XR_262519 MODEL 9059031 protein-coding Tnfrsf18 TNF receptor superfamily member 18 INVOLVED IN positive regulation of cell adhesion (ortholog); positive regulation of leukocyte migration (ortholog); ASSOCIATED WITH anogenital venereal wart (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955486 9571527 9573733 + 102029751 AGCD01059191;GBDI01221225;XM_005404252;XM_005404253;XM_013504221 XP_005404309;XP_005404310;XP_013359675 MODEL 9025291 protein-coding LOC102014016 olfactory receptor 6C1 NW_004955458 2523219 2524157 - 102014016 AGCD01047237;XM_005397243 XP_005397300 MODEL 8879409 protein-coding LOC102007735 uncharacterized LOC102007735 NW_004955455 3711041 3735232 - 102007735 AGCD01045648;XM_005396209;XR_001236266 XP_005396266 MODEL 8945055 ncrna LOC102004451 uncharacterized LOC102004451 NW_004955406 7310932 7332321 + 102004451 AGCD01005768;AGCD01005769;XR_001236295;XR_259483;XR_259484 MODEL 8956659 protein-coding Lrrc46 leucine rich repeat containing 46 INVOLVED IN axoneme assembly (ortholog); maintenance of cell number (ortholog); single fertilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN sperm flagellum (ortholog); sperm midpiece (ortholog) NW_004955451 13276878 13281868 - 102014407 AGCD01043464;GBDF01007360;XM_005394266 XP_005394323 MODEL 9033175 protein-coding Git2 GIT ArfGAP 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); regulation of synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN calyx of Held (ortholog); nucleoplasm (ortholog); presynapse (ortholog) NW_004955455 8611218 8669527 + 102014977 AGCD01045903;AGCD01045904;GBDF01251310;XM_005396431;XM_005396432;XM_005396433;XM_005396434;XM_005396435;XM_005396436;XM_005396437;XM_005396438;XM_005396442;XM_013520335;XR_001236294;XR_262844 XP_005396488;XP_005396489;XP_005396490;XP_005396491;XP_005396492;XP_005396493;XP_005396494;XP_005396495;XP_005396499;XP_013375789 MODEL 8790610 protein-coding Dlgap1 DLG associated protein 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-containing complex binding (ortholog); structural constituent of postsynaptic density (ortholog); INVOLVED IN aggresome assembly (ortholog); modulation of chemical synaptic transmission (ortholog); protein localization to synapse (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic density, intracellular component (ortholog) NW_004955402 6809126 7105356 + 102012591 AGCD01000162;AGCD01000163;AGCD01000164;AGCD01000165;GBBH01181793;XM_005372643;XM_005372644;XM_005372645;XM_005372646;XM_005372647;XM_013517746;XM_013517781;XM_013517823 XP_005372700;XP_005372701;XP_005372702;XP_005372703;XP_005372704;XP_013373200;XP_013373235;XP_013373277 MODEL 8999362 ncrna LOC102005155 uncharacterized LOC102005155 NW_004955494 4421919 4432652 + 102005155 AGCD01061498;GBDF01157914;XR_001231313;XR_264112;XR_264113 MODEL 8734410 pseudo LOC102019027 28S ribosomal protein S36, mitochondrial pseudogene NW_004955407 3770484 3771274 - 102019027 AGCD01006864 MODEL 8699530 pseudo LOC102003375 mortality factor 4-like protein 1 pseudogene NW_004955532 142317 143401 + 102003375 AGCD01070101 MODEL 8986160 protein-coding LOC102012845 NACHT, LRR and PYD domains-containing protein 1-like NW_004955467 10861527 10905757 - 102012845 AGCD01051587;GBCE01022349;XM_013522159;XM_013522160 XP_013377613;XP_013377614 MODEL 8749103 protein-coding Kdm3a lysine demethylase 3A ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9 demethylase activity (ortholog); histone H3K9me/H3K9me2 demethylase activity (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); cellular response to leukemia inhibitory factor (ortholog); formaldehyde biosynthetic process (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955424 1164384 1218607 - 102017353 AGCD01024232;AGCD01024233;GBBH01007022;XM_005385394;XM_005385395;XM_013514631;XR_001234175;XR_001234176 XP_005385451;XP_005385452;XP_013370085 MODEL 8960970 protein-coding Smim11 small integral membrane protein 11 ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955407 33740552 33750974 + 102026831 AGCD01007707;GBDF01195734;XM_005375701;XM_013504452 XP_005375758;XP_013359906 MODEL 8857221 protein-coding LOC102025154 zinc finger protein 85-like NW_004955432 4681460 4704789 - 102025154 AGCD01030733;AGCD01030734;AGCD01030735;AGCD01030736;AGCD01030737;GBBH01213954;GBCQ01068809;XM_013515932 XP_013371386 MODEL 9030080 protein-coding Il10rb interleukin 10 receptor subunit beta ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-10 receptor activity (ortholog); INVOLVED IN interleukin-10-mediated signaling pathway (ortholog); positive regulation of cellular respiration (ortholog); positive regulation of receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); COVID-19 (ortholog); graft-versus-host disease (ortholog); FOUND IN interleukin-10 receptor complex (ortholog); signaling receptor complex (ortholog) NW_004955407 32641097 32659360 + 102019141 AGCD01007680;GBBH01051844;GBBH01051845;XM_005375678 XP_005375735 MODEL 9002445 protein-coding Tshz1 teashirt zinc finger homeobox 1 INVOLVED IN anterior/posterior pattern specification (ortholog); middle ear morphogenesis (ortholog); soft palate development (ortholog); ASSOCIATED WITH Congenital Aural Atresia (ortholog); Familial Prostate Cancer (ortholog); intellectual disability (ortholog) NW_004955402 58695150 58717926 + 102015164 AGCD01001539;GBDK01397330;XM_013511962 XP_013367416 MODEL 8848976 ncrna LOC102009277 uncharacterized LOC102009277 NW_004955474 12346167 12355317 - 102009277 AGCD01054658;GBDK01287845;XR_001230737;XR_001230738 MODEL 8761121 protein-coding Gas7 growth arrest specific 7 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament polymerization (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN actin filament (ortholog); ruffle (ortholog) NW_004955467 6979718 7223948 + 102005917 AGCD01051428;AGCD01051429;AGCD01051430;AGCD01051431;GBDF01222592;GBDJ01420913;XM_005399366;XR_263350;XR_263351 XP_005399423 MODEL 39131357 protein-coding S100A9 S100 calcium binding protein A9 8977688 protein-coding Kynu kynureninase ENCODES a protein that exhibits kynureninase activity (ortholog); protein homodimerization activity (ortholog); pyridoxal phosphate binding (ortholog); INVOLVED IN L-tryptophan catabolic process (ortholog); NAD+ biosynthetic process (ortholog); quinolinate biosynthetic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH Ataxia (ortholog); atrial heart septal defect (ortholog); Catel Manzke syndrome (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955440 9420141 9536767 + 102015154 AGCD01036380;AGCD01036381;AGCD01036382;AGCD01036383;AGCD01036384;GBCQ01101441;XM_005390777;XM_005390778;XM_005390779;XM_013517494;XM_013517495;XM_013517496;XR_001235271;XR_001235272;XR_001235273;XR_001235274 XP_005390834;XP_005390835;XP_005390836;XP_013372948;XP_013372949;XP_013372950 MODEL 8765517 protein-coding Etv5 ETS variant transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); locomotory behavior (ortholog); male germ-line stem cell asymmetric division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955420 21503820 21576539 + 102008001 AGCD01021138;AGCD01021139;AGCD01021140;AGCD01021141;GBDF01249226;XM_013513339 XP_013368793 MODEL 39132729 snrna U6 U6 spliceosomal RNA 8762031 protein-coding Dtx1 deltex E3 ubiquitin ligase 1 ENCODES a protein that exhibits Notch binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); glial cell differentiation (ortholog); negative regulation of neuron differentiation (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); disease of cellular proliferation (ortholog); high grade glioma (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955482 9416456 9447265 + 102007663 AGCD01057569;AGCD01057570;GBCE01117061;GBCQ01064129;XM_013503713 XP_013359167 MODEL 8726261 protein-coding Qrfp pyroglutamylated RFamide peptide ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); neuropeptide hormone activity (ortholog); orexigenic neuropeptide QRFP receptor binding (ortholog); INVOLVED IN grooming behavior (ortholog); locomotory behavior (ortholog); neuropeptide signaling pathway (ortholog) NW_004955513 802809 805835 - 102017901 AGCD01066832;GBCE01009059;XM_005408349 XP_005408406 MODEL 8771651 protein-coding Fgf23 fibroblast growth factor 23 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); type 1 fibroblast growth factor receptor binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to interleukin-6 (ortholog); cellular response to leptin stimulus (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH autosomal dominant hypophosphatemic rickets (ortholog); Bone Fractures (ortholog); calcinosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955413 2182459 2192279 - 102029842 AGCD01013543;GBCE01069564;XM_005378729 XP_005378786 MODEL 8865959 pseudo LOC102020148 protein Smaug homolog 2 pseudogene NW_004955510 3048462 3051086 + 102020148 AGCD01066224 MODEL 9042075 protein-coding LOC102021257 olfactory receptor 7A10-like NW_004955495 8472724 8479391 + 102021257 AGCD01062211;XM_005406179 XP_005406236 MODEL 9033798 ncrna LOC102009650 uncharacterized LOC102009650 NW_004955537 1976715 1992245 - 102009650 AGCD01070909;GBDJ01200201;XR_001232066;XR_001232067;XR_001232068;XR_264772 MODEL 10124265 ncrna LOC106147288 uncharacterized LOC106147288 NW_004955540 681128 739382 - 106147288 AGCD01071283;AGCD01071284;AGCD01071285;GBDJ01058896;XR_001232111 MODEL 9000320 protein-coding Nr0b1 nuclear receptor subfamily 0 group B member 1 ENCODES a protein that exhibits AF-2 domain binding (ortholog); DNA hairpin binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN adrenal gland development (ortholog); cell differentiation (ortholog); gonad development (ortholog); ASSOCIATED WITH 46,XY sex reversal 2 (ortholog); genetic disease (ortholog); hypogonadism (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); membrane (ortholog) NW_004955531 567491 572329 + 102018021 AGCD01070001;GBDF01249610;XM_005410131 XP_005410188 MODEL 8853253 ncrna LOC102003710 uncharacterized LOC102003710 NW_004955575 880017 890569 + 102003710 AGCD01075230;GBDF01020002;XR_265070 MODEL 8930280 protein-coding Slc17a5 solute carrier family 17 member 5 ENCODES a protein that exhibits D-glucuronate transmembrane transporter activity (ortholog); sialic acid transmembrane transporter activity (ortholog); sialic acid:proton symporter activity (ortholog); INVOLVED IN neurotransmitter loading into synaptic vesicle (ortholog); response to bacterium (ortholog); sialic acid transport (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); Anisocoria (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasmic vesicle (ortholog); glutamatergic synapse (ortholog) NW_004955493 8693933 8719250 - 102023049 AGCD01061332;AGCD01061333;AGCD01061334;AGCD01061335;AGCD01061336;GBDJ01130112;GBDK01135048;XM_013504876 XP_013360330 MODEL 9058602 protein-coding Lhfpl7 LHFPL tetraspan subfamily member 7 NW_004955455 237462 251622 + 102010867 AGCD01045555;GBCQ01058010;XM_005396133;XM_013520489;XM_013520490;XM_013520491 XP_005396190;XP_013375943;XP_013375944;XP_013375945 MODEL 8879930 pseudo LOC102021986 high mobility group protein B1 pseudogene NW_004955491 7562214 7570310 + 102021986 AGCD01060601 MODEL 8789252 protein-coding LOC102010431 olfactory receptor 13H1-like NW_004955580 1266092 1267030 - 102010431 AGCD01075652;XM_005414225 XP_005414282 MODEL 8751901 protein-coding LOC102023016 olfactory receptor 148-like NW_004955412 24774653 24775579 + 102023016 AGCD01013125;XM_005378636 XP_005378693 MODEL 8774439 protein-coding Siah1 siah E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); male meiosis I (ortholog); neuron apoptotic process (ortholog); ASSOCIATED WITH BURATTI-HAREL SYNDROME (ortholog); genetic disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN beta-catenin destruction complex (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955474 6970383 6982231 + 102006904 AGCD01054511;GBCB01039065;GBDF01043021;XM_005401400 XP_005401457 MODEL 8996544 protein-coding Tada2b transcriptional adaptor 2B PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN SAGA complex (ortholog); SAGA-type complex (ortholog) NW_004955514 3468078 3478085 - 102015558 AGCD01067096;GBBH01164639;GBDF01085926;XM_005408796 XP_005408853 MODEL 39133465 snrna U4 U4 spliceosomal RNA 8946154 protein-coding Tex15 testis expressed 15, meiosis and synapsis associated INVOLVED IN DNA methylation-dependent constitutive heterochromatin formation (ortholog); fertilization (ortholog); homeostasis of number of cells within a tissue (ortholog); ASSOCIATED WITH CRYPTOZOOSPERMIA (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); myoepithelioma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955463 7296204 7360935 - 102026955 AGCD01049726;GBDF01127895;XM_005398378;XM_013521569;XM_013521570;XM_013521571;XM_013521572 XP_005398435;XP_013377023;XP_013377024;XP_013377025;XP_013377026 MODEL 9031869 protein-coding LOC102017848 retinol dehydrogenase 16-like NW_004955458 4717769 4736029 - 102017848 AGCD01047433;AGCD01047434;AGCD01047435;AGCD01047436;GBDJ01117348;XM_005397335;XM_013520789 XP_005397392;XP_013376243 MODEL 8740059 protein-coding Slc68a1 solute carrier family 68 member 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955485 7945547 7957522 - 102016164 AGCD01058680;GBBH01144041;XM_005403836;XM_013504045;XM_013504046 XP_005403893;XP_013359499;XP_013359500 MODEL 8753141 protein-coding Lrrc47 leucine rich repeat containing 47 ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955486 7880259 7890709 + 102023479 AGCD01059139;GBDI01127111;XM_005404136;XM_005404137 XP_005404193;XP_005404194 MODEL 8862013 pseudo LOC102004452 60S ribosomal protein L31 pseudogene NW_004955453 3310962 3311426 + 102004452 AGCD01044654;XM_005395701 MODEL 8816741 protein-coding Gsk3a glycogen synthase kinase 3 alpha ENCODES a protein that exhibits protein kinase A catalytic subunit binding (ortholog); protein kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN autosome genomic imprinting (ortholog); cardiac left ventricle morphogenesis (ortholog); cell migration (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; nuclear factor, erythroid 2 like 2 signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); bipolar disorder (ortholog); FOUND IN cytosol (ortholog); microtubule (ortholog) NW_004955555 668641 676351 + 102015461 AGCD01073043;GBDJ01086213;GBDK01081429;XM_013508754 XP_013364208 MODEL 8836933 protein-coding Dlgap2 DLG associated protein 2 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN dendrite (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955403 57965571 58493946 - 102016338 AGCD01003170;AGCD01003171;AGCD01003172;AGCD01003173;AGCD01003174;AGCD01003175;AGCD01003176;AGCD01003177;AGCD01003178;AGCD01003179;AGCD01003180;AGCD01003181;AGCD01003182;GBDK01415037;XM_005373860;XM_005373861;XM_013515038 XP_005373917;XP_005373918;XP_013370492 MODEL 39133466 snrna U4 U4 spliceosomal RNA 730469042 scarna SCARNA20 Small Cajal body specific RNA 20 8964548 pseudo LOC102003378 S-phase kinase-associated protein 1 pseudogene NW_004955537 3218460 3219427 - 102003378 AGCD01070953 MODEL 8827868 protein-coding Sulf1 sulfatase 1 ENCODES a protein that exhibits arylsulfatase activity (ortholog); N-acetylglucosamine-6-sulfatase activity (ortholog); INVOLVED IN bone development (ortholog); cartilage development (ortholog); chondrocyte development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955444 9902334 10066929 - 102004652 AGCD01038996;AGCD01038997;AGCD01038998;AGCD01038999;GBCE01136874;XM_005392111;XM_005392112;XM_005392113;XM_005392114;XM_005392115;XM_005392116;XM_013518197;XM_013518198 XP_005392168;XP_005392169;XP_005392170;XP_005392171;XP_005392172;XP_005392173;XP_013373651;XP_013373652 MODEL 8924221 pseudo LOC102025155 prefoldin subunit 4-like NW_004955516 1138625 1139234 - 102025155 AGCD01067413 MODEL 9016868 protein-coding Kdm3b lysine demethylase 3B PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955418 2026254 2098223 - 102024338 AGCD01018739;AGCD01018740;GBCE01003081;GBDF01125628;XM_005382340;XM_013512959;XM_013512960;XM_013512961;XM_013512962 XP_005382397;XP_013368413;XP_013368414;XP_013368415;XP_013368416 MODEL 8845759 protein-coding LOC102012483 olfactory receptor 2B2-like NW_004955576 1406995 1407939 + 102012483 AGCD01075375;XM_005413956 XP_005414013 MODEL 9053556 pseudo LOC102015924 pre-mRNA-splicing factor SPF27 pseudogene NW_004955455 8675269 8676207 + 102015924 AGCD01045904 MODEL 39132399 snrna U6 U6 spliceosomal RNA 8728616 protein-coding Il11 interleukin 11 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); interleukin-11 receptor binding (ortholog); INVOLVED IN interleukin-11-mediated signaling pathway (ortholog); negative regulation of endothelial cell apoptotic process (ortholog); negative regulation of hormone secretion (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); colon adenocarcinoma (ortholog); cystitis (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955567 868272 883563 + 102024172 AGCD01074441;AGCD01074442;AGCD01074443;GBDF01023421;XM_005413324;XM_005413325;XM_013509308;XM_013509309 XP_005413381;XP_005413382;XP_013364762;XP_013364763 MODEL 9067063 ncrna LOC102018672 uncharacterized LOC102018672 NW_004955450 16469003 16471165 - 102018672 AGCD01042844;GBDF01179379;XR_001235843 MODEL 8884763 protein-coding Etv6 ETS variant transcription factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell differentiation (ortholog); hematopoietic stem cell proliferation (ortholog); mesenchymal cell apoptotic process (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog) NW_004955413 8698412 8912011 + 102012300 AGCD01013886;AGCD01013887;GBDI01290570;GBDJ01030940;XM_013511474 XP_013366928 MODEL 8937592 protein-coding LOC102014024 glutathione S-transferase A4-like NW_004955411 3100067 3123039 + 102014024 AGCD01011538;GBCB01001165;XM_005377614;XM_005377615;XM_013510922;XM_013510923 XP_005377671;XP_005377672;XP_013366376;XP_013366377 MODEL 8874933 protein-coding Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 ENCODES a protein that exhibits actin filament binding (ortholog); AP-3 adaptor complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament network formation (ortholog); adenosine metabolic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN actin filament (ortholog); axon terminus (ortholog); BLOC-1 complex (ortholog) NW_004955409 7902125 7913966 - 102019250 AGCD01009369;GBBH01116617;XM_005376726;XM_005376727 XP_005376783;XP_005376784 MODEL 8854842 protein-coding S100b S100 calcium binding protein B ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); astrocyte differentiation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Alzheimer's disease (ortholog); Animal Disease Models (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955407 42972584 42980510 - 102021420 AGCD01007902;GBDI01019684;XM_005375939 XP_005375996 MODEL 9048722 protein-coding Gja1 gap junction protein alpha 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-catenin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN adult heart development (ortholog); ATP transport (ortholog); atrial ventricular junction remodeling (ortholog); PARTICIPATES IN connexin signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adenoma (ortholog); alcohol use disorder (ortholog); FOUND IN anchoring junction (ortholog); apical plasma membrane (ortholog); cell junction (ortholog) NW_004955436 3612533 3618095 + 102018020 AGCD01033637;GBDK01142153;XM_005389132 XP_005389189 MODEL 9067402 protein-coding Dtx2 deltex E3 ubiquitin ligase 2 INVOLVED IN Notch signaling pathway (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955456 15034214 15070521 + 102009689 AGCD01046661;GBDK01084193;XM_005396816;XM_005396817;XM_005396820;XM_013520604;XM_013520605;XM_013520606;XM_013520607;XM_013520608;XM_013520609 XP_005396873;XP_005396874;XP_005396877;XP_013376058;XP_013376059;XP_013376060;XP_013376061;XP_013376062;XP_013376063 MODEL 8854689 protein-coding Tbx1 T-box transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); aorta morphogenesis (ortholog); ASSOCIATED WITH 22q11 Deletion Syndrome (ortholog); acute kidney failure (ortholog); acute myocardial infarction (ortholog); FOUND IN nucleus (ortholog) NW_004955442 18320674 18327062 - 102017169 AGCD01038003;AGCD01038004;GBBH01030757;GBDI01078986;XM_013517961 XP_013373415 MODEL 10163408 ncrna LOC106147289 uncharacterized LOC106147289 NW_004955540 3367856 3385895 - 106147289 AGCD01071337;GBBH01127030;XR_001232112;XR_001232113 MODEL 8979075 protein-coding LOC102003711 protein FAM170A-like NW_004955582 198318 205621 + 102003711 AGCD01075748;AGCD01075749;GBDF01050789;XM_005414281;XM_005414282 XP_005414338;XP_005414339 MODEL 8961201 protein-coding Slc17a6 solute carrier family 17 member 6 ENCODES a protein that exhibits chloride channel activity (ortholog); L-glutamate uniporter activity (ortholog); potassium:proton antiporter activity (ortholog); INVOLVED IN hippocampus development (ortholog); hyaloid vascular plexus regression (ortholog); L-glutamate import (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); learning disability (ortholog); Memory Disorders (ortholog); FOUND IN early endosome (ortholog); excitatory synapse (ortholog); neuron projection (ortholog) NW_004955476 2813368 2854371 + 102009833 AGCD01055235;XM_005401732 XP_005401789 MODEL 8824239 protein-coding Tshz2 teashirt zinc finger homeobox 2 INVOLVED IN regulation of gene expression (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog) NW_004955445 5571587 5830728 - 102016322 AGCD01039472;AGCD01039473;AGCD01039474;AGCD01039475;GBDF01222748;XM_005392287 XP_005392344 MODEL 8860734 pseudo LOC102009279 60S ribosomal protein L34 pseudogene NW_004955477 5072715 5073707 + 102009279 AGCD01055590 MODEL 8991204 ncrna LOC102021988 uncharacterized LOC102021988 NW_004955422 26750279 26754798 - 102021988 AGCD01023300;GBDF01187334;XR_001233969;XR_001233970 MODEL 39132730 snrna U6 U6 spliceosomal RNA 8724084 protein-coding Siah2 siah E3 ubiquitin protein ligase 2 ENCODES a protein that exhibits ubiquitin conjugating enzyme binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN estrogen signaling pathway; nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH lens disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955448 1907478 1926445 - 102018449 AGCD01041271;GBDJ01180931;GBDK01196937;XM_013518651 XP_013374105 MODEL 9034852 protein-coding L1cam L1 cell adhesion molecule ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN axon development (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Alzheimer's disease (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); cell surface (ortholog) NW_004955580 548442 561580 - 102020500 AGCD01075610;GBBH01043761;XM_013509717 XP_013365171 MODEL 8712557 protein-coding Tube1 tubulin epsilon 1 INVOLVED IN cytoskeleton organization (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog) NW_004955526 4484867 4519603 + 102008142 AGCD01069368;GBDF01193580;XM_005409771;XM_005409772;XR_264663 XP_005409828;XP_005409829 MODEL 8700718 protein-coding LOC102020150 olfactory receptor 5D18-like NW_004955511 4966254 4966832 + 102020150 AGCD01066541;GBBH01201753;XM_005408081 XP_005408138 MODEL 9000342 pseudo LOC102019040 guanine nucleotide-binding protein G(s) subunit alpha-like NW_004955410 15378838 15386042 - 102019040 AGCD01010925;AGCD01010926;XR_259907 MODEL 8777879 protein-coding Qrfpr pyroglutamylated RFamide peptide receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH bone structure disease (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN non-motile cilium (ortholog) NW_004955428 19238479 19290510 + 102020145 AGCD01028088;AGCD01028089;AGCD01028090;AGCD01028091;XM_005386788 XP_005386845 MODEL 9033919 ncrna LOC102014025 uncharacterized LOC102014025 NW_004955411 11085430 11090350 + 102014025 AGCD01011803;GBDF01237810;XR_001232812;XR_001232813;XR_001232814 MODEL 8857598 protein-coding LOC102012851 late histone H2B.L4-like NW_004955413 862577 885893 - 102012851 AGCD01013492;AGCD01013493;GBDI01162044;XM_013511494 XP_013366948 MODEL 39132854 snrna U6 U6 spliceosomal RNA 8832954 protein-coding Tex19 testis expressed 19 ENCODES a protein that exhibits piRNA binding (ortholog); INVOLVED IN male meiotic nuclear division (ortholog); spermatogenesis (ortholog); transposable element silencing (ortholog); FOUND IN nucleus (ortholog) NW_004955506 773128 775155 - 102010925 AGCD01065235;GBDF01251542;XM_005407204 XP_005407261 MODEL 8996199 protein-coding Nr0b2 nuclear receptor subfamily 0 group B member 2 ENCODES a protein that exhibits nuclear retinoic acid receptor binding (ortholog); nuclear retinoid X receptor binding (ortholog); nuclear thyroid hormone receptor binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH alcoholic hepatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cognitive disorder (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955452 6251047 6253541 - 102025428 AGCD01044099;XM_005394886 XP_005394943 MODEL 39133107 snrna U6 U6 spliceosomal RNA 8851772 protein-coding Bltp1 bridge-like lipid transfer protein family member 1 INVOLVED IN endocytic recycling (ortholog); endosomal transport (ortholog); lipid transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alkuraya-Kucinskas syndrome (ortholog); anemia (ortholog) NW_004955428 18224987 18424425 - 102016180 AGCD01028058;AGCD01028059;AGCD01028060;AGCD01028061;AGCD01028062;AGCD01028063;GBDJ01004871;XM_005386777;XM_013515288;XM_013515289;XM_013515290;XM_013515291;XM_013515292;XM_013515293;XM_013515294;XM_013515295 XP_005386834;XP_013370742;XP_013370743;XP_013370744;XP_013370745;XP_013370746;XP_013370747;XP_013370748;XP_013370749 MODEL 9023936 ncrna LOC102003383 uncharacterized LOC102003383 NW_004955440 16475861 16478883 - 102003383 AGCD01036518;GBDF01286061;XR_262033 MODEL 8797788 protein-coding Wtap WT1 associated protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA processing (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); nuclear speck (ortholog) NW_004955439 21149970 21174479 - 102017706 AGCD01036142;AGCD01036143;GBCE01054140;GBDJ01127571;XM_013517328 XP_013372782 MODEL 8768483 protein-coding Dlgap3 DLG associated protein 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); molecular adaptor activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN modification of postsynaptic structure (ortholog); modulation of chemical synaptic transmission (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cholinergic synapse (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955452 12981375 13039036 - 102014526 AGCD01044376;GBDF01076075;XM_005395128 XP_005395185 MODEL 9001509 protein-coding Tbx10 T-box transcription factor 10 ASSOCIATED WITH cleft palate (ortholog); colon adenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955422 17857038 17866507 + 102011453 AGCD01022932;GBCQ01039564;XM_005384302;XM_005384303;XM_005384304;XM_005384305;XM_013514281 XP_005384359;XP_005384360;XP_005384361;XP_005384362;XP_013369735 MODEL 8958251 protein-coding Gas8 growth arrest specific 8 ENCODES a protein that exhibits microtubule binding (ortholog); small GTPase binding (ortholog); INVOLVED IN axoneme assembly (ortholog); brain development (ortholog); cilium movement involved in cell motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); ciliary basal body (ortholog) NW_004955541 3477067 3494991 + 102022961 AGCD01071450;GBCE01024598;XM_005411085;XM_005411086 XP_005411142;XP_005411143 MODEL 8797830 protein-coding Tnfrsf19 TNF receptor superfamily member 19 INVOLVED IN hair follicle development (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955497 3945119 4022478 + 102018509 AGCD01062561;AGCD01062562;AGCD01062563;GBCE01052470;GBCE01052471;XM_013505499 XP_013360953 MODEL 8904982 pseudo LOC102007740 39S ribosomal protein L47, mitochondrial pseudogene NW_004955459 7511838 7512274 + 102007740 AGCD01048113 MODEL 8752348 ncrna LOC102010432 uncharacterized LOC102010432 NW_004955449 7929705 7955196 - 102010432 AGCD01042005;XR_262495 MODEL 9063702 protein-coding Sulf2 sulfatase 2 ENCODES a protein that exhibits arylsulfatase activity (ortholog); N-acetylglucosamine-6-sulfatase activity (ortholog); INVOLVED IN bone development (ortholog); cartilage development (ortholog); chondrocyte development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955445 9919472 10020491 + 102008993 AGCD01039635;AGCD01039636;AGCD01039637;AGCD01039638;AGCD01039639;GBDF01239422;GBDK01017753;XM_013518265 XP_013373719 MODEL 8785343 protein-coding LOC102023020 sodium-dependent multivitamin transporter-like NW_004955469 9131732 9133911 - 102023020 AGCD01052491;AGCD01052492;GBCQ01139319;XM_005400465;XM_005400466 XP_005400522;XP_005400523 MODEL 8976836 protein-coding Tada3 transcriptional adaptor 3 ENCODES a protein that exhibits nuclear receptor binding (ortholog); protein domain specific binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN chromatin organization (ortholog); mitotic cell cycle (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN ATAC complex (ortholog); mitotic spindle (ortholog); nucleoplasm (ortholog) NW_004955561 1304222 1314092 - 102008779 AGCD01073848;GBCQ01040112;XM_005413033 XP_005413090 MODEL 39132400 snrna U6 U6 spliceosomal RNA 8915487 pseudo LOC102012486 histone H3.1-like NW_004955581 100297 101951 + 102012486 AGCD01075657 MODEL 8752182 protein-coding LOC102005156 olfactory receptor 4X2-like NW_004955422 356829 357764 + 102005156 AGCD01022404;XM_005384936 XP_005384993 MODEL 9043935 protein-coding Eva1a eva-1 homolog A, regulator of programmed cell death INVOLVED IN apoptotic process (ortholog); autophagy (ortholog); cardiac left ventricle morphogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog) NW_004955424 10308586 10358477 + 102016071 AGCD01024511;AGCD01024512;GBCE01133628;XM_005385464;XM_005385465;XM_005385466;XM_005385467;XM_005385470;XM_005385471;XM_013514721;XM_013514722 XP_005385521;XP_005385522;XP_005385523;XP_005385524;XP_005385527;XP_005385528;XP_013370175;XP_013370176 MODEL 8827808 protein-coding Tubgcp2 tubulin gamma complex component 2 INVOLVED IN brain development (ortholog); neuron migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); complex cortical dysplasia with other brain malformations 15 (ortholog); FOUND IN centrosome (ortholog); microtubule organizing center (ortholog) NW_004955477 10909213 10932833 - 102003020 AGCD01055709;GBCE01076319;XM_005402058;XM_013503035;XM_013503036;XM_013503037;XM_013503038 XP_005402115;XP_013358489;XP_013358490;XP_013358491;XP_013358492 MODEL 39133467 snrna U4 U4 spliceosomal RNA 9026781 protein-coding LOC102004456 keratin-associated protein 20-2-like NW_004955407 30031156 30031311 - 102004456 AGCD01007623;XM_005375633 XP_005375690 MODEL 9052351 ncrna LOC102025165 uncharacterized LOC102025165 NW_004955532 1964848 1970998 + 102025165 AGCD01070208;GBBH01020719;XR_001232022;XR_264720 MODEL 8764487 protein-coding Fgf3 fibroblast growth factor 3 INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); negative regulation of cardiac muscle tissue development (ortholog); organ induction (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); Breast Neoplasms (ortholog); cleft lip (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955422 16333363 16339853 + 102016488 AGCD01022895;XM_005384959 XP_005385016 MODEL 9062926 pseudo LOC102009651 synaptonemal complex protein 3-like NW_004955437 1319326 1320146 - 102009651 AGCD01034204 MODEL 8959493 protein-coding LOC102021258 uncharacterized LOC102021258 NW_004955498 3334724 3388529 - 102021258 AGCD01062897;AGCD01062898;AGCD01062899;AGCD01062900;XM_005406477 XP_005406534 MODEL 9059933 protein-coding Tshz3 teashirt zinc finger homeobox 3 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); kidney morphogenesis (ortholog); kidney smooth muscle cell differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); congenital anomalies of the kidney and urinary tract (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN growth cone (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955468 6448167 6669706 + 102006647 AGCD01051985;AGCD01051986;AGCD01051987;AGCD01051988;GBDJ01311365;XM_005400095;XR_263394 XP_005400152 MODEL 8880245 protein-coding Il11ra interleukin 11 receptor subunit alpha ENCODES a protein that exhibits interleukin-11 binding (ortholog); interleukin-11 receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); decidualization (ortholog); developmental process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog); signaling receptor complex (ortholog) NW_004955472 1474802 1485352 - 102021002 AGCD01053395;GBBH01063003;XM_005401045;XM_013523015;XM_013523016;XM_013523017;XM_013523018 XP_005401102;XP_013378469;XP_013378470;XP_013378471;XP_013378472 MODEL 8881236 protein-coding Sult2b1 sulfotransferase family 2B member 1 ENCODES a protein that exhibits alcohol sulfotransferase activity (ortholog); cholesterol binding (ortholog); cholesterol sulfotransferase activity (ortholog); INVOLVED IN 3'-phosphoadenosine 5'-phosphosulfate metabolic process (ortholog); cholesterol metabolic process (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN sulfite oxidase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autosomal recessive congenital ichthyosis 14 (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955559 1942878 1968895 - 102009767 AGCD01073682;AGCD01073683;AGCD01073684;GBBH01088818;XM_005412951 XP_005413008 MODEL 8727392 protein-coding LOC102007742 probable C-mannosyltransferase DPY19L2 NW_004955460 7871421 7960495 + 102007742 AGCD01048500;AGCD01048501;AGCD01048502;AGCD01048503;AGCD01048504;AGCD01048505;AGCD01048506;AGCD01048507;AGCD01048508;GBDF01196111;XM_013521290;XM_013521291;XM_013521292 XP_013376744;XP_013376745;XP_013376746 MODEL 39132401 snrna U6 U6 spliceosomal RNA 8816657 protein-coding Smim12 small integral membrane protein 12 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955452 12972797 12976963 - 102014003 AGCD01044376;GBBH01089725;XM_005395126;XM_005395127;XM_013519691 XP_005395183;XP_005395184;XP_013375145 MODEL 39132731 snrna U6 U6 spliceosomal RNA 8840792 protein-coding Slc6a1 solute carrier family 6 member 1 ENCODES a protein that exhibits amino acid:sodium symporter activity (ortholog); gamma-aminobutyric acid transmembrane transporter activity (ortholog); gamma-aminobutyric acid:sodium:chloride symporter activity (ortholog); INVOLVED IN associative learning (ortholog); chloride transmembrane transport (ortholog); gamma-aminobutyric acid import (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); absence epilepsy (ortholog); alcohol dependence (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); GABA-ergic synapse (ortholog) NW_004955429 13930899 13946010 + 102014155 AGCD01028771;GBDF01171454;XM_005387004;XM_005387005 XP_005387061;XP_005387062 MODEL 8826056 protein-coding LOC102017852 mast cell protease 4-like NW_004955409 35817333 35819685 + 102017852 AGCD01010433;XM_005377176 XP_005377233 MODEL 8967577 protein-coding Gja10 gap junction protein alpha 10 ENCODES a protein that exhibits gap junction channel activity (ortholog); INVOLVED IN detection of light stimulus involved in visual perception (ortholog); gamete generation (ortholog); response to light stimulus (ortholog); FOUND IN gap junction (ortholog) NW_004955411 16586673 16601999 + 102017755 AGCD01011978;XM_005415331 XP_005415388 MODEL 8797936 protein-coding Gsk3b glycogen synthase kinase 3 beta ENCODES a protein that exhibits ATP binding (ortholog); beta-catenin binding (ortholog); dynactin binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); autosome genomic imprinting (ortholog); axonogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; glycogen biosynthetic pathway; Hedgehog signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); acute kidney failure (ortholog); acute myeloid leukemia (ortholog); FOUND IN axon (ortholog); beta-catenin destruction complex (ortholog); cell body (ortholog) NW_004955427 19489972 19671137 - 102022723 AGCD01027374;GBCB01076672;XM_005386460;XM_005386461;XM_013515157 XP_005386517;XP_005386518;XP_013370611 MODEL 8852299 protein-coding Lhpp phospholysine phosphohistidine inorganic pyrophosphate phosphatase ENCODES a protein that exhibits inorganic diphosphate phosphatase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN phosphate-containing compound metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955477 2480660 2606887 + 102003234 AGCD01055523;AGCD01055524;AGCD01055525;GBDI01228294;XM_005401973 XP_005402030 MODEL 8960421 protein-coding S100g S100 calcium binding protein G PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH gestational diabetes (ortholog); pre-eclampsia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955519 1623695 1625164 - 102008138 AGCD01067902;XM_005409148;XM_013507002 XP_005409205;XP_013362456 MODEL 8724576 protein-coding Dtx3 deltex E3 ubiquitin ligase 3 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN Notch signaling pathway (ortholog); regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955458 5328723 5334092 + 102006546 AGCD01047476;GBDI01009417;XM_005397398;XM_005397399 XP_005397455;XP_005397456 MODEL 10199366 protein-coding LOC106147290 basic proline-rich protein-like NW_004955540 2149873 2151133 + 106147290 AGCD01071316;GBDF01209132;GBDK01169859;XM_013507912 XP_013363366 MODEL 8814119 pseudo LOC102003712 N-alpha-acetyltransferase 50 pseudogene NW_004955402 792233 792986 - 102003712 AGCD01000033 MODEL 39133108 snrna U6 U6 spliceosomal RNA 8904889 protein-coding Kdm4a lysine demethylase 4A ENCODES a protein that exhibits histone demethylase activity (ortholog); histone H3K36 demethylase activity (ortholog); histone H3K36me2/H3K36me3 demethylase activity (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); cardiac muscle hypertrophy in response to stress (ortholog); negative regulation of astrocyte differentiation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia areata (ortholog); breast cancer (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955537 3199394 3255945 + 102003693 AGCD01070950;AGCD01070951;AGCD01070952;AGCD01070953;GBDF01304480;XM_005410671;XM_005410672;XM_005410673;XM_005410674;XM_013507751 XP_005410728;XP_005410729;XP_005410730;XP_005410731;XP_013363205 MODEL 39133468 snrna U4 U4 spliceosomal RNA 8913876 protein-coding CUNH5orf47 chromosome unknown C5orf47 homolog ASSOCIATED WITH thymoma (ortholog) NW_004955408 26629049 26664803 + 102004678 AGCD01008672;GBDF01085946;GBDF01085947;XM_013507163;XM_013507167 XP_013362617;XP_013362621 MODEL 8723609 protein-coding LOC102021990 olfactory receptor 18-like NW_004955495 512537 513481 - 102021990 AGCD01061633;XM_013505092 XP_013360546 MODEL 8876489 protein-coding LOC102010434 small proline-rich protein 3-like NW_004955592 374906 377181 - 102010434 AGCD01076311;GBDI01016407;XM_005414613;XM_005414614 XP_005414670;XP_005414671 MODEL 8788066 protein-coding Dlgap4 DLG associated protein 4 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN modification of postsynaptic structure (ortholog); regulation of synapse maturation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cholinergic synapse (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955422 25098914 25221238 - 102023161 AGCD01023245;AGCD01023246;AGCD01023247;GBDF01221819;XM_005384740;XM_005384741;XM_005384742;XM_005384743 XP_005384797;XP_005384798;XP_005384799;XP_005384800 MODEL 8727690 protein-coding Gask1a golgi associated kinase 1A ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955420 27900342 27931079 - 102018100 AGCD01021462;GBDJ01280251;GBDJ01280254;XM_013513529;XM_013513530;XM_013513531;XM_013513532 XP_013368983;XP_013368984;XP_013368985;XP_013368986 MODEL 9017690 protein-coding Tbx15 T-box transcription factor 15 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein homodimerization activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN embryonic cranial skeleton morphogenesis (ortholog); embryonic skeletal system morphogenesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); Cousin Syndrome (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription repressor complex (ortholog) NW_004955435 21874154 21993510 - 102013331 AGCD01033488;AGCD01033489;GBCB01005530;XM_005389071;XM_005389072 XP_005389128;XP_005389129 MODEL 8923305 protein-coding Lrrc49 leucine rich repeat containing 49 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); microtubule (ortholog) NW_004955450 5903345 6030279 - 102009445 AGCD01042514;AGCD01042515;AGCD01042516;AGCD01042517;AGCD01042518;GBDF01051822;XM_005393636;XM_005393637;XM_005393639 XP_005393693;XP_005393694;XP_005393696 MODEL 9026561 ncrna LOC102020154 uncharacterized LOC102020154 NW_004955431 15144542 15164404 - 102020154 AGCD01030347;GBDF01276795;XR_001234574 MODEL 730469459 scarna SCARNA20 Small Cajal body specific RNA 20 8739900 protein-coding Qrich1 glutamine rich 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); integrated stress response signaling (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955532 1052174 1092211 - 102005298 AGCD01070164;AGCD01070165;GBDF01081240;XM_005410175;XM_005410176;XM_013507580;XM_013507581 XP_005410232;XP_005410233;XP_013363034;XP_013363035 MODEL 39132855 snrna U6 U6 spliceosomal RNA 8934086 protein-coding LOC102012852 olfactory receptor 52K1-like NW_004955414 19929257 19930261 - 102012852 AGCD01015343;XM_005380042 XP_005380099 MODEL 9038195 protein-coding Nr1d1 nuclear receptor subfamily 1 group D member 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); brain small vessel disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955451 14743763 14750903 - 102009137 AGCD01043570;GBCE01028262;XM_005394345;XM_005394346 XP_005394402;XP_005394403 MODEL 8842395 protein-coding LOC102009284 uncharacterized LOC102009284 NW_004955420 26735389 26736424 + 102009284 AGCD01021427;GBDF01043434;XM_005383475 XP_005383532 MODEL 8914282 ncrna LOC102018674 uncharacterized LOC102018674 NW_004955451 315679 320230 - 102018674 AGCD01042932;GBDK01028726;XR_262564 MODEL 8998560 protein-coding LOC102003389 vomeronasal type-1 receptor 1-like NW_004955558 668713 669606 + 102003389 AGCD01073385;XM_005412740 XP_005412797 MODEL 8714133 protein-coding LOC102015927 olfactory receptor 6C68 NW_004955458 2895155 2896093 + 102015927 AGCD01047255;XM_005397246 XP_005397303 MODEL 8990868 protein-coding Tubgcp3 tubulin gamma complex component 3 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955404 969027 1027229 + 102013372 AGCD01003215;AGCD01003216;AGCD01003217;GBDF01189724;XM_005373977;XM_005373978;XM_005373979;XM_013515700 XP_005374034;XP_005374035;XP_005374036;XP_013371154 MODEL 8999355 pseudo LOC102004458 protein regulator of cytokinesis 1 pseudogene NW_004955408 33268665 33270602 + 102004458 AGCD01008866 MODEL 8812593 protein-coding Wtip WT1 interacting protein ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); miRNA-mediated post-transcriptional gene silencing (ortholog); negative regulation of hippo signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); stomach cancer (ortholog); thymoma (ortholog); FOUND IN P-body (ortholog) NW_004955468 4082681 4106265 + 102005130 AGCD01051886;AGCD01051887;AGCD01051888;AGCD01051889;AGCD01051890;GBCE01095541;GBDI01225629;XM_013522520 XP_013377974 MODEL 8944969 protein-coding Lhx1 LIM homeobox 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anatomical structure morphogenesis (ortholog); anterior/posterior axis specification (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Female Urogenital Diseases (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog); transcription regulator complex (ortholog) NW_004955451 1037936 1048501 - 102028487 AGCD01042958;GBCQ01073234;XM_005393940 XP_005393997 MODEL 8954407 protein-coding Tnfrsf1a TNF receptor superfamily member 1A ENCODES a protein that exhibits protease binding (ortholog); protein-containing complex binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN aortic valve development (ortholog); apoptotic process (ortholog); astrocyte activation (ortholog); PARTICIPATES IN ceramide signaling pathway; nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acne (ortholog); acquired immunodeficiency syndrome (ortholog); Acute Experimental Pancreatitis (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); extracellular region (ortholog) NW_004955413 3982670 3996320 - 102012749 AGCD01013591;GBDK01007941;XM_005378759;XM_013511327;XM_013511328 XP_005378816;XP_013366781;XP_013366782 MODEL 9047822 ncrna LOC102023021 uncharacterized LOC102023021 NW_004955470 8330094 8336006 - 102023021 AGCD01052826;GBDF01041373;XR_263477 MODEL 8844659 pseudo LOC102005159 E3 SUMO-protein ligase PIAS2-like NW_004955503 7889282 7891162 + 102005159 AGCD01064803 MODEL 8889987 pseudo LOC102019041 uncharacterized protein C6orf106 homolog NW_004955464 370613 382428 - 102019041 AGCD01049934;AGCD01049935 MODEL 8946359 protein-coding Taf1 TATA-box binding protein associated factor 1 ENCODES a protein that exhibits acetyl-CoA binding (ortholog); DNA binding (ortholog); histone acetyltransferase activity (ortholog); INVOLVED IN cellular response to ATP (ortholog); cellular response to UV (ortholog); DNA damage response (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Adrenal Insufficiency (ortholog); allergic disease (ortholog); FOUND IN chromatin (ortholog); MLL1 complex (ortholog); nucleolus (ortholog) NW_004955475 10930175 11006876 + 102008090 AGCD01055127;AGCD01055128;AGCD01055129;AGCD01055130;AGCD01055131;GBDJ01313931;XM_005401669;XM_005401670;XM_005401671;XM_013502870 XP_005401726;XP_005401727;XP_005401728;XP_013358324 MODEL 9013810 protein-coding Kdm4b lysine demethylase 4B ENCODES a protein that exhibits histone demethylase activity (ortholog); histone H3K36 demethylase activity (ortholog); histone H3K9 demethylase activity (ortholog); INVOLVED IN brain development (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH alopecia areata (ortholog); autosomal dominant intellectual developmental disorder 65 (ortholog); breast cancer (ortholog); FOUND IN nucleoplasm (ortholog); pericentric heterochromatin (ortholog) NW_004955495 4019066 4101577 - 102029641 AGCD01061894;AGCD01061895;AGCD01061896;GBCB01038901;XM_005405772;XM_005405773;XM_005405774;XM_013505294 XP_005405829;XP_005405830;XP_005405831;XP_013360748 MODEL 8880790 protein-coding Il12a interleukin 12A ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); interleukin-12 beta subunit binding (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH asthma (ortholog); Chronic Hepatitis B (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955448 10611131 10617911 + 102022032 AGCD01041496;GBCE01162263;GBDK01148444;XM_005393161 XP_005393218 MODEL 9057269 protein-coding Sult4a1 sulfotransferase family 4A member 1 ENCODES a protein that exhibits identical protein binding (ortholog); sulfotransferase activity (ortholog); INVOLVED IN dendrite arborization (ortholog); sulfur compound metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) NW_004955413 28800537 28821082 - 102018820 AGCD01014567;GBDF01176531;XM_005379446;XM_013511268 XP_005379503;XP_013366722 MODEL 8864639 protein-coding Eva1b eva-1 homolog B NW_004955452 14296607 14298331 - 102004667 AGCD01044463;GBDK01020136;XM_013519505 XP_013374959 MODEL 8731627 pseudo LOC102017856 40S ribosomal protein SA pseudogene NW_004955412 30610458 30611355 - 102017856 AGCD01013303 MODEL 8702063 protein-coding Bltp2 bridge-like lipid transfer protein family member 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955481 4509840 4544706 + 102029080 AGCD01056943;GBCE01116508;GBCQ01065420;XM_005402743 XP_005402800 MODEL 8803763 protein-coding Gskip GSK3B interacting protein ENCODES a protein that exhibits beta-catenin binding (ortholog); protein kinase A binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH myeloid leukemia (ortholog); myeloid neoplasm (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955438 18153564 18174980 + 102022857 AGCD01035464;AGCD01035465;GBCB01042777;XM_005390397 XP_005390454 MODEL 8801385 protein-coding Slc17a7 solute carrier family 17 member 7 ENCODES a protein that exhibits chloride channel activity (ortholog); extracellularly glutamate-gated chloride channel activity (ortholog); L-glutamate transmembrane transporter activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); chloride transport (ortholog); excitatory postsynaptic potential (ortholog); ASSOCIATED WITH learning disability (ortholog); Memory Disorders (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cerebellar mossy fiber (ortholog); excitatory synapse (ortholog); membrane (ortholog) NW_004955559 1399182 1409074 + 102017170 AGCD01073644;GBDF01145535;XM_005412884 XP_005412941 MODEL 8743696 protein-coding Lrrc4b leucine rich repeat containing 4B ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN positive regulation of synapse assembly (ortholog); regulation of postsynaptic density assembly (ortholog); regulation of presynapse assembly (ortholog); ASSOCIATED WITH lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cerebellar mossy fiber (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955559 621458 651007 + 102016527 AGCD01073602;AGCD01073603;AGCD01073604;AGCD01073605;AGCD01073606;GBDF01015462;XM_013509059 XP_013364513 MODEL 8824923 protein-coding S100p S100 calcium binding protein P ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN endothelial cell migration (ortholog); ASSOCIATED WITH Mouth Neoplasms (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955514 3704002 3707098 - 102019423 AGCD01067107;AGCD01067108;GBDF01193973;GBDJ01017243;XM_005408812 XP_005408869 MODEL 8855738 protein-coding LOC102025166 HLA class II histocompatibility antigen, DO alpha chain ENCODES a protein that exhibits MHC class II protein complex binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); negative regulation of antigen processing and presentation of peptide antigen via MHC class II (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Familial Prostate Cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN MHC class II protein complex (ortholog) NW_004955437 1603395 1606800 - 102025166 AGCD01034219;GBDI01009349;XM_005389464;XM_005389465;XM_013516976;XM_013516977 XP_005389521;XP_005389522;XP_013372430;XP_013372431 MODEL 8805379 protein-coding L2hgdh L-2-hydroxyglutarate dehydrogenase ENCODES a protein that exhibits (S)-2-hydroxyglutarate dehydrogenase activity (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); tricarboxylic acid cycle (ortholog); ASSOCIATED WITH 2-hydroxyglutaric aciduria (ortholog); acute myeloid leukemia (ortholog); Ataxia (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955409 12485003 12531759 + 102023983 AGCD01009549;AGCD01009550;AGCD01009551;GBBH01069421;XM_005376827 XP_005376884 MODEL 10338860 ncrna LOC106147291 uncharacterized LOC106147291 NW_004955540 1588415 1629658 - 106147291 AGCD01071304;GBDF01264615;XR_001232119 MODEL 39133109 snrna U6 U6 spliceosomal RNA 8721807 ncrna LOC102012487 uncharacterized LOC102012487 NW_004955449 15407328 15451351 + 102012487 AGCD01042194;XR_262507 MODEL 8994391 pseudo LOC102021259 60S ribosomal protein L36 pseudogene NW_004955424 10966934 10977357 + 102021259 AGCD01024536 MODEL 9062543 pseudo LOC102021993 60S ribosomal protein L39 pseudogene NW_004955426 23811335 23811493 - 102021993 AGCD01026658;XM_005386237 MODEL 9038956 pseudo LOC102010436 centromere protein L-like NW_004955402 50936205 51007657 + 102010436 AGCD01001288;AGCD01001289 MODEL 8912743 ncrna LOC102007747 uncharacterized LOC102007747 NW_004955462 12097970 12113964 + 102007747 AGCD01049397;GBDF01234407;XR_263131 MODEL 8847933 protein-coding CUNH6orf118 chromosome unknown C6orf118 homolog ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog) NW_004955439 16386460 16404123 + 102004425 AGCD01036022;GBDF01046521;XM_005390678;XM_005390680;XM_013517417;XR_001235217;XR_261993 XP_005390735;XP_005390737;XP_013372871 MODEL 8748006 protein-coding Gask1b golgi associated kinase 1B ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955471 9284986 9327337 + 102026313 AGCD01053209;AGCD01053210;GBCE01108864;GBDF01055187;XM_013522911 XP_013378365 MODEL 39132732 snrna U6 U6 spliceosomal RNA 8932036 protein-coding Tex2 testis expressed 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955478 7616196 7689136 + 102015951 AGCD01055983;AGCD01055984;AGCD01055985;AGCD01055986;GBDF01303240;XM_005402171;XM_005402172;XM_013503181;XM_013503182 XP_005402228;XP_005402229;XP_013358635;XP_013358636 MODEL 39132857 snrna U6 U6 spliceosomal RNA 8728025 protein-coding Sult6b1 sulfotransferase family 6B member 1 ASSOCIATED WITH lung cancer (ortholog); thymoma (ortholog) NW_004955441 4971283 4994219 - 102030670 AGCD01036866;GBBH01200001;XM_005390867 XP_005390924 MODEL 8906405 protein-coding Dtx3l deltex E3 ubiquitin ligase 3L ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); histone binding (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog); DNA repair-dependent chromatin remodeling (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955427 21806170 21812701 + 102011223 AGCD01027459;GBCE01170484;XM_005386514 XP_005386571 MODEL 8733104 protein-coding Siah3 siah E3 ubiquitin protein ligase family member 3 INVOLVED IN negative regulation of protein localization to mitochondrion (ortholog); regulation of protein stability (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); stomach cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955518 3473120 3539086 - 102016738 AGCD01067804;AGCD01067805;GBDF01111139;XM_005409091;XM_013506955;XR_001231838 XP_005409148;XP_013362409 MODEL 39133469 snrna U4 U4 spliceosomal RNA 8925384 protein-coding Tubgcp4 tubulin gamma complex component 4 ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN centrosome (ortholog); recycling endosome (ortholog) NW_004955416 9933695 9962635 + 102006575 AGCD01017100;GBDF01127538;XM_005381385;XM_005381387 XP_005381442;XP_005381444 MODEL 8838103 protein-coding Wwc1 WW and C2 domain containing 1 ENCODES a protein that exhibits kinase binding (ortholog); molecular adaptor activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN cell migration (ortholog); hippo signaling (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955408 21362644 21529164 + 102010976 AGCD01008554;GBDJ01134962;GBDJ01134963;XM_005376298;XM_005376299 XP_005376355;XP_005376356 MODEL 8878375 protein-coding Dlgap5 DLG associated protein 5 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); mitotic spindle (ortholog); nucleus (ortholog) NW_004955409 8408040 8445587 + 102025879 AGCD01009407;AGCD01009408;AGCD01009409;AGCD01009410;AGCD01009411;GBDF01087616;XM_005376750;XM_013510318;XM_013510319 XP_005376807;XP_013365772;XP_013365773 MODEL 8822221 protein-coding Tnfrsf1b TNF receptor superfamily member 1B ENCODES a protein that exhibits tumor necrosis factor binding (ortholog); tumor necrosis factor receptor activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN aortic valve development (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acne (ortholog); acquired immunodeficiency syndrome (ortholog); Acute Experimental Pancreatitis (ortholog); FOUND IN axon (ortholog); membrane (ortholog); membrane raft (ortholog) NW_004955486 1790531 1817986 - 102026430 AGCD01058964;GBDJ01141681;XM_005403956 XP_005404013 MODEL 9055829 pseudo LOC102019042 proteasome assembly chaperone 2 pseudogene NW_004955411 23260964 23261773 + 102019042 AGCD01012104 MODEL 8810642 protein-coding Smim13 small integral membrane protein 13 ASSOCIATED WITH Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955465 3321886 3343467 - 102018701 AGCD01050374;AGCD01050375;GBCB01041194;XM_005398828 XP_005398885 MODEL 8705700 ncrna LOC102005160 uncharacterized LOC102005160 NW_004955505 2073316 2169827 - 102005160 AGCD01064984;AGCD01064985;GBDF01195356;XR_001231571;XR_264302;XR_264303 MODEL 730469110 scarna SCARNA20 Small Cajal body specific RNA 20 8928253 protein-coding Taf10 TATA-box binding protein associated factor 10 ENCODES a protein that exhibits DNA binding (ortholog); enzyme binding (ortholog); histone acetyltransferase activity (ortholog); INVOLVED IN allantois development (ortholog); apoptotic process (ortholog); DNA-templated transcription initiation (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH dilated cardiomyopathy (ortholog); familial hypertrophic cardiomyopathy (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955414 22322954 22324412 - 102027062 AGCD01015452;AGCD01015453;GBBH01001860;GBDF01006506;XM_005380163 XP_005380220 MODEL 8965331 ncrna LOC102012854 uncharacterized LOC102012854 NW_004955471 10905684 10911425 - 102012854 AGCD01053235;GBDF01112987;XR_263533 MODEL 9018271 protein-coding Il12b interleukin 12B ENCODES a protein that exhibits cytokine activity (ortholog); cytokine receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); ankylosing spondylitis (ortholog); anogenital venereal wart (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955408 13302506 13316300 - 102021422 AGCD01008352;GBBH01220378;XM_005376251 XP_005376308 MODEL 9019568 protein-coding CUNH6orf132 chromosome unknown C6orf132 homolog ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955437 8337580 8362873 - 102021914 AGCD01034486;AGCD01034487;GBCQ01150917;XM_005389717;XM_013516785 XP_005389774;XP_013372239 MODEL 8962479 pseudo LOC102003391 pre-mRNA-splicing factor RBM22 pseudogene NW_004955443 7720328 7734609 + 102003391 AGCD01038296;AGCD01038297 MODEL 8710056 protein-coding LOC102018675 uncharacterized LOC102018675 NW_004955622 83258 210783 - 102018675 AGCD01077384;AGCD01077385;AGCD01077386;AGCD01077387;AGCD01077388;AGCD01077389;AGCD01077390;AGCD01077391;AGCD01077392;AGCD01077393;AGCD01077394;AGCD01077395;XM_013510157 XP_013365611 MODEL 8828984 protein-coding Fgf4 fibroblast growth factor 4 INVOLVED IN apoptotic process involved in morphogenesis (ortholog); cartilage condensation (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); Pilonidal Sinus (ortholog) NW_004955422 16362418 16364126 + 102016820 AGCD01022896;GBDF01078711;XM_005384960 XP_005385017 MODEL 8756996 protein-coding Slc17a8 solute carrier family 17 member 8 ENCODES a protein that exhibits chloride channel activity (ortholog); L-glutamate uniporter activity (ortholog); sodium:phosphate symporter activity (ortholog); INVOLVED IN cochlea development (ortholog); L-glutamate import (ortholog); L-glutamate transmembrane transport (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 25 (ortholog); autosomal recessive nonsyndromic deafness 9 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical dendrite (ortholog); axon terminus (ortholog); basal dendrite (ortholog) NW_004955405 36063688 36115312 + 102021302 AGCD01005409;XM_005374531;XM_005374532 XP_005374588;XP_005374589 MODEL 8994078 protein-coding LOC102014026 uncharacterized LOC102014026 NW_004955412 13200937 13230604 + 102014026 AGCD01012829;GBBH01091540;XM_005378060;XM_005378061;XM_005378062;XM_005378063;XM_005378064;XM_005378065;XM_005378066;XM_005378067;XM_013511002;XM_013511003;XM_013511004 XP_005378117;XP_005378118;XP_005378119;XP_005378120;XP_005378121;XP_005378122;XP_005378123;XP_005378124;XP_013366456;XP_013366457;XP_013366458 MODEL 39132403 snrna U6 U6 spliceosomal RNA 9032843 protein-coding LOC102004463 olfactory receptor 8G1-like NW_004955412 25028370 25030457 + 102004463 AGCD01013133;XM_005378412;XM_013510986 XP_005378469;XP_013366440 MODEL 8833451 protein-coding S100pbp S100P binding protein ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955452 11078170 11114061 + 102027937 AGCD01044323;AGCD01044324;AGCD01044325;AGCD01044326;AGCD01044327;GBDK01169419;XM_005395086;XM_005395087;XM_005395088;XM_005395089;XM_005395091;XM_005395092;XM_005395093;XM_013519554;XM_013519555 XP_005395143;XP_005395144;XP_005395145;XP_005395146;XP_005395148;XP_005395149;XP_005395150;XP_013375008;XP_013375009 MODEL 9002586 protein-coding Slc6a11 solute carrier family 6 member 11 ENCODES a protein that exhibits amino acid binding (ortholog); amino acid:sodium symporter activity (ortholog); gamma-aminobutyric acid:sodium:chloride symporter activity (ortholog); INVOLVED IN monocarboxylic acid transport (ortholog); neurotransmitter transport (ortholog); neurotransmitter uptake (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Experimental Seizures (ortholog); FOUND IN cell projection (ortholog); GABA-ergic synapse (ortholog); plasma membrane (ortholog) NW_004955429 13774455 13880690 + 102021032 AGCD01028769;AGCD01028770;GBDF01034697;XM_005387255 XP_005387312 MODEL 8771950 protein-coding Sidt1 SID1 transmembrane family member 1 ENCODES a protein that exhibits cholesterol binding (ortholog); double-stranded RNA binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955427 13649216 13747983 + 102021028 AGCD01027254;AGCD01027255;AGCD01027256;AGCD01027257;GBBH01198041;GBCE01010856;XM_005386616 XP_005386673 MODEL 8875688 protein-coding Gja4 gap junction protein alpha 4 INVOLVED IN blood vessel development (ortholog); calcium ion transport (ortholog); cell-cell signaling (ortholog); PARTICIPATES IN connexin signaling pathway; ASSOCIATED WITH angiosarcoma (ortholog); coronary artery disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN connexin complex (ortholog); gap junction (ortholog) NW_004955452 12902764 12905337 + 102013375 AGCD01044370;GBCE01072844;XM_005395125;XM_013519442 XP_005395182;XP_013374896 MODEL 8859682 ncrna LOC102021998 uncharacterized LOC102021998 NW_004955429 22441592 22449273 - 102021998 AGCD01029027;GBCQ01181689;XR_261383;XR_261384 MODEL 8902881 protein-coding LOC102010437 vomeronasal type-1 receptor 4-like NW_004955603 500248 501171 - 102010437 AGCD01076850;XM_005414846 XP_005414903 MODEL 8910170 protein-coding LOC102003715 prolactin-like NW_004955634 57648 64392 - 102003715 AGCD01077606;XM_005415042 XP_005415099 MODEL 39132733 snrna U6 U6 spliceosomal RNA 8896589 protein-coding Eva1c eva-1 homolog C ENCODES a protein that exhibits heparin binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955407 31934954 32043827 + 102016021 AGCD01007663;AGCD01007664;AGCD01007665;AGCD01007666;AGCD01007667;AGCD01007668;GBCE01085482;XM_005375667;XM_005375668;XM_005375669;XM_013504147;XM_013504151;XM_013504153 XP_005375724;XP_005375725;XP_005375726;XP_013359601;XP_013359605;XP_013359607 MODEL 8847062 protein-coding Tex22 testis expressed 22 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog) NW_004955538 3618777 3627906 + 102006073 AGCD01071172;GBDF01003251;XM_005410862;XM_005410863;XM_005410864 XP_005410919;XP_005410920;XP_005410921 MODEL 8745001 protein-coding Slc6a12 solute carrier family 6 member 12 ENCODES a protein that exhibits gamma-aminobutyric acid:sodium:chloride symporter activity (ortholog); glycine betaine:sodium:chloride symporter activity (ortholog); monocarboxylic acid transmembrane transporter activity (ortholog); INVOLVED IN cellular hyperosmotic response (ortholog); gamma-aminobutyric acid transport (ortholog); glycine betaine transport (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955454 6946486 6970247 + 102017095 AGCD01045274;GBDI01091148;XM_005396021;XM_005396022;XM_005396023;XM_005396024;XM_005396025;XM_005396026;XM_005396027;XM_013520166 XP_005396078;XP_005396079;XP_005396080;XP_005396081;XP_005396082;XP_005396083;XP_005396084;XP_013375620 MODEL 9017723 ncrna LOC102015931 uncharacterized LOC102015931 NW_004955409 36421675 36465609 + 102015931 AGCD01010459;AGCD01010460;AGCD01010461;AGCD01010462;GBCQ01158580;XR_259807 MODEL 9068247 pseudo LOC102025167 THUMP domain-containing protein 3 pseudogene NW_004955534 1630167 1631771 - 102025167 AGCD01070504 MODEL 8726437 protein-coding Lhx2 LIM homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); axon extension (ortholog); axon guidance (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Gait Ataxia (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nucleus (ortholog) NW_004955419 3999364 4019543 - 102025581 AGCD01019745;AGCD01019746;AGCD01019747;GBBH01168279;GBDF01257508;XM_005382498 XP_005382555 MODEL 39133111 snrna U6 U6 spliceosomal RNA 8716099 protein-coding L3hypdh trans-L-3-hydroxyproline dehydratase ENCODES a protein that exhibits hydro-lyase activity (ortholog); proline racemase activity (ortholog); trans-L-3-hydroxyproline dehydratase activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955466 13196223 13205339 - 102008078 AGCD01051152;GBCQ01072766;XM_005399227;XR_001236806 XP_005399284 MODEL 8797866 ncrna LOC102020155 uncharacterized LOC102020155 NW_004955433 9188880 9223294 + 102020155 AGCD01031610;AGCD01031611;GBDI01212146;XR_261569 MODEL 8960538 protein-coding Dtx4 deltex E3 ubiquitin ligase 4 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of innate immune response (ortholog); proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog) NW_004955511 3758631 3782560 + 102009204 AGCD01066476;GBDJ01419868;GBDJ01419870;XM_005408058 XP_005408115 MODEL 8833305 pseudo LOC102023022 chromodomain Y-like protein NW_004955471 4640224 4642375 - 102023022 AGCD01053084 MODEL 39133470 snrna U4 U4 spliceosomal RNA 39131322 protein-coding TUBGCP5 tubulin gamma complex component 5 8952922 protein-coding Tbx18 T-box transcription factor 18 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein homodimerization activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anterior/posterior axis specification (ortholog); cell differentiation (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); colorectal cancer (ortholog); congenital anomalies of the kidney and urinary tract 2 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription repressor complex (ortholog) NW_004955411 12194560 12232374 - 102018269 AGCD01011842;AGCD01011843;GBCB01065597;XM_005377699 XP_005377756 MODEL 9012033 protein-coding LOC102021261 uncharacterized LOC102021261 NW_004955504 891729 893066 + 102021261 AGCD01064831;GBDF01150503;XM_013505867 XP_013361321 MODEL 8916579 pseudo LOC102007751 olfactory receptor 147-like NW_004955412 25290203 25291080 + 102007751 AGCD01013143 MODEL 9054982 pseudo LOC102009285 WW domain-containing adapter protein with coiled-coil pseudogene NW_004955487 7895732 7897622 - 102009285 AGCD01059414 MODEL 8711974 protein-coding Wwc2 WW and C2 domain containing 2 ENCODES a protein that exhibits kinase binding (ortholog); molecular adaptor activity (ortholog); signaling adaptor activity (ortholog); INVOLVED IN hippo signaling (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of hippo signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955403 25482601 25602412 - 102011268 AGCD01002289;AGCD01002290;AGCD01002291;GBDK01018936;XM_013513141 XP_013368595 MODEL 8710178 protein-coding Dlk1 delta like non-canonical Notch ligand 1 INVOLVED IN bone mineralization (ortholog); cell differentiation (ortholog); embryonic skeletal system development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; Notch signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH biliary atresia (ortholog); central precocious puberty (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN cytoplasm (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955627 37886 43730 - 102024746 AGCD01077479;GBDF01049151;GBDK01224500;XM_005415026 XP_005415083 MODEL 9059283 protein-coding Bltp3a bridge-like lipid transfer protein family member 3A ENCODES a protein that exhibits histone deacetylase binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN late endosome (ortholog) NW_004955437 2844544 2905073 + 102012244 AGCD01034288;AGCD01034289;AGCD01034290;AGCD01034291;AGCD01034292;GBDF01200537;XM_005390117 XP_005390174 MODEL 39132858 snrna U6 U6 spliceosomal RNA 8841338 ncrna LOC102005164 uncharacterized LOC102005164 NW_004955432 18505196 18551305 - 102005164 AGCD01031143;AGCD01031144;AGCD01031145;AGCD01031146;AGCD01031147;GBDF01151735;XR_261533 MODEL 8971448 protein-coding Tsks testis specific serine kinase substrate ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); myoepithelioma (ortholog); FOUND IN centriole (ortholog) NW_004955559 1151247 1162856 + 102004756 AGCD01073632;GBCE01108010;XM_005412834;XM_005412835;XM_005412836;XM_005412837;XM_005412838;XM_005412839;XM_005412840;XM_005412841;XM_005412843;XM_005412845 XP_005412891;XP_005412892;XP_005412893;XP_005412894;XP_005412895;XP_005412896;XP_005412897;XP_005412898;XP_005412900;XP_005412902 MODEL 8753630 protein-coding Taf11 TATA-box binding protein associated factor 11 ENCODES a protein that exhibits DNA binding (ortholog); nuclear thyroid hormone receptor binding (ortholog); nuclear vitamin D receptor binding (ortholog); INVOLVED IN host-mediated activation of viral transcription (ortholog); mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription factor TFIID complex (ortholog) NW_004955437 2908939 2916154 - 102019843 AGCD01034292;GBCB01073288;XM_005389535 XP_005389592 MODEL 8767145 protein-coding Gsn gelsolin ENCODES a protein that exhibits actin binding (ortholog); calcium ion binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament capping (ortholog); actin filament depolymerization (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); FOUND IN actin cap (ortholog); actin cytoskeleton (ortholog); apical ectoplasmic specialization (ortholog) NW_004955419 6682202 6733361 - 102018497 AGCD01019862;AY533218;GBCE01002417;XM_005382570;XM_013513254;XM_013513255 AAS59421;XP_005382627;XP_013368708;XP_013368709 MODEL 8734750 protein-coding Lrrc4c leucine rich repeat containing 4C ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); cell-cell adhesion mediator activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); regulation of axonogenesis (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); membrane (ortholog); postsynaptic density membrane (ortholog) NW_004955422 5637650 6854173 + 102028978 AGCD01022582;AGCD01022583;AGCD01022584;AGCD01022585;AGCD01022586;AGCD01022587;AGCD01022588;AGCD01022589;AGCD01022590;AGCD01022591;AGCD01022592;AGCD01022593;AGCD01022594;AGCD01022595;AGCD01022596;AGCD01022597;AGCD01022598;AGCD01022599;AGCD01022600;AGCD01022601;AGCD01022602;AGCD01022603;AGCD01022604;AGCD01022605;AGCD01022606;AGCD01022607;AGCD01022608;AGCD01022609;GBBH01192644;XM_005384093;XM_005384094;XM_005384095;XM_005384097;XM_013514327;XR_001234018 XP_005384150;XP_005384151;XP_005384152;XP_005384154;XP_013369781 MODEL 10360974 ncrna LOC106147292 uncharacterized LOC106147292 NW_004955540 2656233 2672286 - 106147292 AGCD01071324;XR_001232120 MODEL 8848182 protein-coding Il12rb1 interleukin 12 receptor subunit beta 1 ENCODES a protein that exhibits coreceptor activity (ortholog); cytokine binding (ortholog); interleukin-12 receptor activity (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); interleukin-12-mediated signaling pathway (ortholog); interleukin-23-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); asthma (ortholog); FOUND IN external side of plasma membrane (ortholog); interleukin-12 receptor complex (ortholog); interleukin-23 receptor complex (ortholog) NW_004955524 3276932 3299617 + 102011474 AGCD01068876;AGCD01068877;AGCD01068878;AGCD01068879;GBBH01019037;GBDF01252409;XM_013507268 XP_013362722 MODEL 8946582 protein-coding Sumf1 sulfatase modifying factor 1 ENCODES a protein that exhibits formylglycine-generating oxidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN post-translational protein modification (ortholog); ASSOCIATED WITH mucosulfatidosis (ortholog); sphingolipidosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955421 8982059 9050936 + 102019179 AGCD01021830;AGCD01021831;AGCD01021832;GBCE01055349;XM_005383741 XP_005383798 MODEL 8960373 pseudo LOC102005166 cactin pseudogene NW_004955433 1837660 1843410 - 102005166 AGCD01031371 MODEL 8785472 protein-coding Qrich2 glutamine rich 2 INVOLVED IN flagellated sperm motility (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Asthenozoospermia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); nucleus (ortholog) NW_004955506 5990070 6015808 + 102026451 AGCD01065396;AGCD01065397;AGCD01065398;GBDF01010040;XM_013506111;XM_013506112;XM_013506113 XP_013361565;XP_013361566;XP_013361567 MODEL 8918482 protein-coding Tex26 testis expressed 26 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955431 14880152 14910325 - 102018520 AGCD01030343;GBBH01036988;XM_005387737;XM_005387739;XM_013515719 XP_005387794;XP_005387796;XP_013371173 MODEL 9019618 protein-coding Fgf5 fibroblast growth factor 5 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); glial cell differentiation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); familial isolated trichomegaly (ortholog); thymoma (ortholog) NW_004955433 4521566 4540672 + 102025037 AGCD01031469;AGCD01031470;XM_005388218;XM_013516118 XP_005388275;XP_013371572 MODEL 39132404 snrna U6 U6 spliceosomal RNA 8708635 pseudo LOC102017857 40S ribosomal protein S15a pseudogene NW_004955412 16023672 16024171 - 102017857 AGCD01012891;XM_005378627 MODEL 9040257 pseudo LOC102009655 dynein assembly factor 3, axonemal homolog NW_004955441 695019 709803 - 102009655 AGCD01036728;AGCD01036729;AGCD01036730;AGCD01036731 MODEL 39133471 snrna U4 U4 spliceosomal RNA 8946741 protein-coding Gast gastrin ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Barrett's esophagus (ortholog); Colonic Neoplasms (ortholog); FOUND IN extracellular region (ortholog) NW_004955451 15987160 15988067 + 102025645 AGCD01043645;XM_005394625 XP_005394682 MODEL 730469099 scarna SCARNA20 Small Cajal body specific RNA 20 8997689 protein-coding Smim14 small integral membrane protein 14 INVOLVED IN blastocyst hatching (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955443 7762760 7828545 + 102024959 AGCD01038297;AGCD01038298;GBDF01009135;XM_005391976 XP_005392033 MODEL 8836391 protein-coding Tbx19 T-box transcription factor 19 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell fate commitment (ortholog); pituitary gland development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Adrenal Insufficiency (ortholog) NW_004955462 8830280 8856721 - 102018064 AGCD01049329;GBDF01303304;XM_005398207 XP_005398264 MODEL 8788461 protein-coding LOC102012855 vomeronasal type-1 receptor 90-like NW_004955414 15022049 15022963 - 102012855 AGCD01015170;XM_005380442 XP_005380499 MODEL 8812711 protein-coding Gja5 gap junction protein alpha 5 ENCODES a protein that exhibits connexin binding (ortholog); disordered domain specific binding (ortholog); gap junction channel activity (ortholog); INVOLVED IN angiogenesis (ortholog); artery morphogenesis (ortholog); atrial cardiac muscle cell to AV node cell communication by electrical coupling (ortholog); PARTICIPATES IN connexin signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); atrial standstill 1 (ortholog); Brain Injuries (ortholog); FOUND IN cell projection (ortholog); connexin complex (ortholog); gap junction (ortholog) NW_004955568 635319 652692 + 102011154 AGCD01074524;GBDJ01063287;XM_005413452;XM_005413453;XM_005413454;XM_005413455;XM_005413456 XP_005413509;XP_005413510;XP_005413511;XP_005413512;XP_005413513 MODEL 9064795 protein-coding S100z S100 calcium binding protein Z ENCODES a protein that exhibits calcium ion binding (ortholog); protein homodimerization activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955425 24014039 24022842 - 102019932 AGCD01025872;GBCE01049545;XM_005386034;XM_005386036;XM_005386037;XM_013514756;XM_013514757;XM_013514758;XM_013514759;XM_013514760;XM_013514761;XM_013514762 XP_005386091;XP_005386093;XP_005386094;XP_013370210;XP_013370211;XP_013370212;XP_013370213;XP_013370214;XP_013370215;XP_013370216 MODEL 9052183 pseudo LOC102015932 EF-hand domain-containing protein D1 pseudogene NW_004955409 32305466 32315030 + 102015932 AGCD01010357;AGCD01010358;AGCD01010359;XR_259814 MODEL 8959704 protein-coding LOC102003392 WAP four-disulfide core domain protein 10A NW_004955445 11634309 11635726 - 102003392 AGCD01039708;GBDF01230954;XM_005392420 XP_005392477 MODEL 8723303 protein-coding Kdm4c lysine demethylase 4C ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); histone demethylase activity (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); blastocyst formation (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH alopecia areata (ortholog); autistic disorder (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); pericentric heterochromatin (ortholog) NW_004955434 10646524 11000589 + 102007806 AGCD01032358;AGCD01032359;AGCD01032360;AGCD01032361;AGCD01032362;AGCD01032363;AGCD01032364;AGCD01032365;AGCD01032366;AGCD01032367;AGCD01032368;AGCD01032369;GBDJ01371221;XM_005388674 XP_005388731 MODEL 9065210 protein-coding Slc17a9 solute carrier family 17 member 9 ENCODES a protein that exhibits ADP transmembrane transporter activity (ortholog); ATP transmembrane transporter activity (ortholog); guanine nucleotide transmembrane transporter activity (ortholog); INVOLVED IN ADP transport (ortholog); ATP export (ortholog); ATP transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromaffin granule membrane (ortholog); lysosomal membrane (ortholog); mucin granule (ortholog) NW_004955528 1124430 1139476 - 102019730 AGCD01069552;GBDK01265855;XM_005409998;XM_005410000;XM_005410001 XP_005410055;XP_005410057;XP_005410058 MODEL 8894907 protein-coding Tnfrsf21 TNF receptor superfamily member 21 INVOLVED IN adaptive immune response (ortholog); apoptotic process (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); cervical cancer (ortholog); Gliosis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955437 11877051 11915220 - 102021278 AGCD01034587;GBCE01169389;GBDK01322050;XM_013517103 XP_013372557 MODEL 8829381 protein-coding L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H1 reader activity (ortholog); INVOLVED IN chromatin organization (ortholog); constitutive heterochromatin formation (ortholog); hemopoiesis (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); chromatin lock complex (ortholog); condensed chromosome (ortholog) NW_004955445 13621007 13645809 - 102025953 AGCD01039799;GBDF01306919;GBDK01005004;XM_013518251 XP_013373705 MODEL 8877485 ncrna LOC102023031 uncharacterized LOC102023031 NW_004955417 10305485 10332256 + 102023031 AGCD01018071;GBDF01307283;XR_260471 MODEL 8973019 ncrna LOC102010438 uncharacterized LOC102010438 NW_004955649 5929 9935 + 102010438 AGCD01077777;AGCD01077778;GBDJ01151562;XR_265178 MODEL 9031441 protein-coding Sidt2 SID1 transmembrane family member 2 ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); AP-2 adaptor complex binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); glucose homeostasis (ortholog); regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN lysosomal membrane (ortholog); lysosome (ortholog); plasma membrane (ortholog) NW_004955412 18505453 18521667 + 102024322 AGCD01012944;GBDJ01139640;XM_005378196;XM_005378197 XP_005378253;XP_005378254 MODEL 8743187 protein-coding LOC102021265 secreted and transmembrane protein 1A NW_004955506 823508 832146 + 102021265 AGCD01065236;AGCD01065237;GBDI01197125;GBDJ01319535;XM_013506143 XP_013361597 MODEL 8959292 pseudo LOC102009287 E3 SUMO-protein ligase PIAS2-like NW_004955421 24211084 24213430 - 102009287 AGCD01022209 MODEL 8897014 pseudo LOC102003718 N-alpha-acetyltransferase 50 pseudogene NW_004955988 4743 5256 + 102003718 AGCD01078815 MODEL 8984655 pseudo LOC102012489 B-cell CLL/lymphoma 7 protein family member C pseudogene NW_004955402 2619020 2627815 + 102012489 AGCD01000086 MODEL 8706833 protein-coding LOC102019044 serpin B6 NW_004955465 10220475 10248997 + 102019044 AGCD01050504;AGCD01050505;AGCD01050506;GBCE01029516;XM_005398908;XM_005398909 XP_005398965;XP_005398966 MODEL 8874445 protein-coding Wwc3 WWC family member 3 ENCODES a protein that exhibits kinase binding (ortholog); molecular adaptor activity (ortholog); signaling adaptor activity (ortholog); INVOLVED IN hippo signaling (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of hippo signaling (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955544 3012602 3126518 - 102008666 AGCD01071747;AGCD01071748;GBCE01023937;GBCQ01101676;XM_005411401 XP_005411458 MODEL 8835693 protein-coding Bltp3b bridge-like lipid transfer protein family member 3B ENCODES a protein that exhibits GARP complex binding (ortholog); lipid transfer activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); intermembrane lipid transfer (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog) NW_004955405 35814803 35935553 - 102019020 AGCD01005402;AGCD01005403;AGCD01005404;AGCD01005405;GBDJ01165887;XM_013518586 XP_013374040 MODEL 8977679 protein-coding LOC102014027 olfactory receptor 2B11-like NW_004955465 13748530 13762288 - 102014027 AGCD01050621;GBDF01098883;XM_005398974;XM_005398975 XP_005399031;XP_005399032 MODEL 8804393 protein-coding LOC102018676 protein SPACA7-like NW_004955404 1903444 1922226 + 102018676 AGCD01003236;AGCD01003237;GBDF01001013;XM_005373996;XM_013515729 XP_005374053;XP_013371183 MODEL 39133112 snrna U6 U6 spliceosomal RNA 8821998 protein-coding Slc6a13 solute carrier family 6 member 13 ENCODES a protein that exhibits amino acid binding (ortholog); amino acid transmembrane transporter activity (ortholog); amino acid:sodium symporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); creatine transmembrane transport (ortholog); gamma-aminobutyric acid import (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) NW_004955454 6866740 6940686 + 102015075 AGCD01045271;AGCD01045272;AGCD01045273;AGCD01045274;GBDK01348066;XM_005396014;XM_005396016;XM_005396017;XM_005396018;XM_013520165 XP_005396071;XP_005396073;XP_005396074;XP_005396075;XP_013375619 MODEL 8873626 protein-coding Tbx2 T-box transcription factor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN aorta morphogenesis (ortholog); apoptotic process (ortholog); atrioventricular canal development (ortholog); ASSOCIATED WITH atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); cleft palate (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955451 2458612 2466264 + 102009448 AGCD01043010;GBCE01075470;GBCQ01040992;XM_005393968 XP_005394025 MODEL 8708669 ncrna LOC102020158 uncharacterized LOC102020158 NW_004955527 937906 940168 + 102020158 AGCD01069387;GBDF01019742;XR_264665 MODEL 8980145 protein-coding Lhx3 LIM homeobox 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN cell differentiation (ortholog); dorsal/ventral pattern formation (ortholog); gene expression (ortholog); ASSOCIATED WITH amenorrhea (ortholog); atrial fibrillation (ortholog); combined or isolated pituitary hormone deficiency 1 (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955513 4464149 4470962 + 102016736 AGCD01066927;AGCD01066928;XM_005408529 XP_005408586 MODEL 8994019 protein-coding Nr1d2 nuclear receptor subfamily 1 group D member 2 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN circadian behavior (ortholog); energy homeostasis (ortholog); lipid homeostasis (ortholog); ASSOCIATED WITH atrioventricular septal defect (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955430 15812449 15834341 + 102011227 AGCD01029618;GBBH01090069;GBCC01022957;XM_005415383 XP_005415440 MODEL 8846316 protein-coding Dtymk deoxythymidylate kinase ENCODES a protein that exhibits ATP binding (ortholog); dTMP kinase activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); dTDP biosynthetic process (ortholog); dTTP biosynthetic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Neoplasms (ortholog); NEURODEGENERATION, CHILDHOOD-ONSET, WITH PROGRESSIVE MICROCEPHALY (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955542 155741 163759 + 102006392 AGCD01071460;AGCD01071461;GBCE01076903;XM_005411121;XM_005411122 XP_005411178;XP_005411179 MODEL 8897509 protein-coding LOC102021999 uncharacterized LOC102021999 NW_004955511 2647517 2649065 - 102021999 AGCD01066422;GBDF01304076;XM_013506441 XP_013361895 MODEL 39132405 snrna U6 U6 spliceosomal RNA 8795440 protein-coding LOC102007756 two pore calcium channel protein 2-like NW_004955470 3199435 3237984 - 102007756 AGCD01052693;GBDK01185352;XM_005400630;XM_005400631;XM_005400632;XM_013522828;XM_013522829 XP_005400687;XP_005400688;XP_005400689;XP_013378282;XP_013378283 MODEL 8883822 ncrna LOC102009657 uncharacterized LOC102009657 NW_004955442 3325633 3327511 + 102009657 AGCD01037505;GBDF01145907;XR_262111 MODEL 8905341 protein-coding Evc EvC ciliary complex subunit 1 INVOLVED IN cartilage development (ortholog); endochondral bone growth (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); atrial heart septal defect (ortholog); Breast Cancer, Familial (ortholog); FOUND IN ciliary basal body (ortholog); ciliary membrane (ortholog); cilium (ortholog) NW_004955514 4279603 4330897 - 102022418 AGCD01067129;AGCD01067130;AGCD01067131;GBCQ01005915;XM_013506839;XM_013506840;XM_013506841;XR_001231780 XP_013362293;XP_013362294;XP_013362295 MODEL 39132734 snrna U6 U6 spliceosomal RNA 9026957 protein-coding CUNH6orf136 chromosome unknown C6orf136 homolog ASSOCIATED WITH lung squamous cell carcinoma (ortholog); urinary bladder cancer (ortholog); uveal melanoma (ortholog) NW_004955583 653994 657385 + 102017723 AGCD01075845;AGCD01075846;GBCB01006587;GBDI01062201;XM_013509801 XP_013365255 MODEL 730469373 scarna SCARNA20 Small Cajal body specific RNA 20 8804737 protein-coding Smim15 small integral membrane protein 15 ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955446 7335295 7341209 + 102028480 AGCD01040112;GBDI01067814;XM_005392648;XM_005392649;XM_005392650;XM_005392651 XP_005392705;XP_005392706;XP_005392707;XP_005392708 MODEL 8884333 protein-coding Gata1 GATA binding protein 1 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); basophil differentiation (ortholog); cell development (ortholog); ASSOCIATED WITH acute megakaryocytic leukemia (ortholog); acute myeloid leukemia (ortholog); Altitude Sickness (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-DNA complex (ortholog) NW_004955543 334581 342042 + 102024277 AGCD01071575;GBBH01219135;XM_005411277;XM_005411278;XM_005411279 XP_005411334;XP_005411335;XP_005411336 MODEL 8946101 ncrna LOC102025169 uncharacterized LOC102025169 NW_004955537 234120 234410 + 102025169 AGCD01070855;GBDI01045663;XR_264769 MODEL 8861341 protein-coding Lrrc52 leucine rich repeat containing 52 ENCODES a protein that exhibits potassium channel activator activity (ortholog); potassium channel activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) NW_004955462 11115888 11137501 - 102005346 AGCD01049385;GBDF01001668;XM_005398247 XP_005398304 MODEL 8748300 protein-coding Il12rb2 interleukin 12 receptor subunit beta 2 ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-12 receptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to interleukin-12 (ortholog); interleukin-12-mediated signaling pathway (ortholog); positive regulation of natural killer cell proliferation (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); Brain Injuries (ortholog); FOUND IN external side of plasma membrane (ortholog); interleukin-12 receptor complex (ortholog) NW_004955423 23774557 23806744 - 102015967 AGCD01024017;AGCD01024018;GBBH01120818;GBDF01250178;XM_013514509 XP_013369963 MODEL 8792305 pseudo LOC102004464 ubiquitin-like-conjugating enzyme ATG3 pseudogene NW_004955466 12161005 12161997 - 102004464 AGCD01051113;XR_263318 MODEL 8728419 pseudo LOC102015936 60S ribosomal protein L26-like 1 pseudogene NW_004955466 8883590 8883988 + 102015936 AGCD01051003 MODEL 8903725 protein-coding Tex261 testis expressed 261 INVOLVED IN positive regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955424 14233322 14246222 + 102029414 AGCD01024648;GBDJ01309647;XM_005385604;XM_013514639 XP_005385661;XP_013370093 MODEL 8728018 protein-coding Fgf6 fibroblast growth factor 6 INVOLVED IN cartilage condensation (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); myoblast differentiation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); prostate carcinoma in situ (ortholog); FOUND IN sarcolemma (ortholog) NW_004955413 2246965 2257883 - 102030404 AGCD01013544;GBCB01049049;XM_005378730 XP_005378787 MODEL 8834003 protein-coding LOC102020160 disintegrin and metalloproteinase domain-containing protein 32-like NW_004955536 3191220 3334848 - 102020160 AGCD01070812;AGCD01070813;AGCD01070814;AGCD01070815;AGCD01070816;AGCD01070817;GBDF01006513;XM_013507728 XP_013363182 MODEL 8931262 protein-coding Tbx20 T-box transcription factor 20 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN aortic valve development (ortholog); aortic valve morphogenesis (ortholog); atrial septum morphogenesis (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); aortic valve disease 1 (ortholog); atrial heart septal defect (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955460 7794313 7856906 + 102017638 AGCD01048495;AGCD01048496;AGCD01048497;AGCD01048498;GBDF01151740;XM_013521111 XP_013376565 MODEL 8792492 protein-coding LOC102017859 C-type lectin domain family 4 member A-like NW_004955413 5371896 5380676 - 102017859 AGCD01013670;GBCE01108550;XM_005378875 XP_005378932 MODEL 9066185 protein-coding Dlk2 delta like non-canonical Notch ligand 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955437 9297557 9302581 - 102007813 AGCD01034524;AGCD01034525;GBCC01001936;XM_005389766;XM_005389767;XM_013516814;XM_013516815 XP_005389823;XP_005389824;XP_013372268;XP_013372269 MODEL 9012408 protein-coding Tnfrsf25 TNF receptor superfamily member 25 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955486 6121906 6127060 + 102008322 AGCD01059108;GBDK01323168;XM_005404080;XM_005404081;XM_005404082;XM_005404083;XM_005404084;XM_013504289;XM_013504290 XP_005404137;XP_005404138;XP_005404139;XP_005404140;XP_005404141;XP_013359743;XP_013359744 MODEL 8979519 ncrna LOC102023036 uncharacterized LOC102023036 NW_004955483 8469720 8483504 + 102023036 AGCD01057837;GBDF01162509;XR_001231031;XR_263870 MODEL 39131402 protein-coding TAF12 TATA-box binding protein associated factor 12 8730795 protein-coding Gja8 gap junction protein alpha 8 ENCODES a protein that exhibits gap junction channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell-cell signaling (ortholog); gap junction-mediated intercellular transport (ortholog); ASSOCIATED WITH anterior segment dysgenesis (ortholog); blindness (ortholog); cataract (ortholog); FOUND IN connexin complex (ortholog); plasma membrane (ortholog) NW_004955568 514905 516551 - 102010529 AGCD01074522;GBDF01215343;XM_005413451 XP_005413508 MODEL 8790738 ncrna LOC102019045 uncharacterized LOC102019045 NW_004955466 9453241 9501042 - 102019045 AGCD01051041;AGCD01051042;GBCQ01154689;XR_001236769 MODEL 730469428 scarna SCARNA20 Small Cajal body specific RNA 20 8992271 protein-coding Sumf2 sulfatase modifying factor 2 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955456 8238301 8251682 + 102003732 AGCD01046464;AGCD01046465;GBCE01115137;XM_005396703;XM_013520547;XM_013520548;XM_013520549 XP_005396760;XP_013376001;XP_013376002;XP_013376003 MODEL 9009386 pseudo LOC102005168 uncharacterized LOC102005168 NW_004955434 10798324 10816183 - 102005168 AGCD01032363;AGCD01032364;AGCD01032365 MODEL 8876574 protein-coding LOC102014028 NXPE family member 1 ENCODES a protein that exhibits N-acetylneuraminate 9-O-acetyltransferase activity (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955412 16107277 16115577 - 102014028 AGCD01012893;XM_005378162;XM_013510993 XP_005378219;XP_013366447 MODEL 9059663 protein-coding Wwox WW domain containing oxidoreductase ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); extrinsic apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); amelogenesis imperfecta type 1H (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955522 1265732 2185372 + 102026035 AGCD01068359;AGCD01068360;AGCD01068361;AGCD01068362;AGCD01068363;AGCD01068364;AGCD01068365;GBDF01158326;GBDF01158329;XM_013507098 XP_013362552 MODEL 8873066 protein-coding Slc6a14 solute carrier family 6 member 14 ENCODES a protein that exhibits (R)-carnitine transmembrane transporter activity (ortholog); alanine transmembrane transporter activity (ortholog); aromatic amino acid transmembrane transporter activity (ortholog); INVOLVED IN (R)-carnitine transmembrane transport (ortholog); alanine transport (ortholog); amino acid import across plasma membrane (ortholog); ASSOCIATED WITH Acidoses (ortholog); celiac disease (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); cytoplasm (ortholog) NW_004955534 3463057 3488577 - 102020710 AGCD01070584;GBDJ01165487;XM_005410472;XM_005410473;XM_013507709 XP_005410529;XP_005410530;XP_013363163 MODEL 39133472 snrna U4 U4 spliceosomal RNA 8727339 protein-coding Qrsl1 glutaminyl-tRNA amidotransferase subunit QRSL1 ENCODES a protein that exhibits glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity (ortholog); INVOLVED IN glutaminyl-tRNAGln biosynthesis via transamidation (ortholog); mitochondrial translation (ortholog); regulation of protein stability (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN glutamyl-tRNA(Gln) amidotransferase complex (ortholog); mitochondrion (ortholog) NW_004955411 31950727 31981522 + 102006992 AGCD01012289;AGCD01012290;GBDF01157003;XM_005377831 XP_005377888 MODEL 8751904 protein-coding Kdm4d lysine demethylase 4D ENCODES a protein that exhibits chromatin DNA binding (ortholog); damaged DNA binding (ortholog); histone demethylase activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH esophageal cancer (ortholog); nephroblastoma (ortholog); FOUND IN nucleus (ortholog); pericentric heterochromatin (ortholog); site of double-strand break (ortholog) NW_004955605 7585 32650 - 102023767 AGCD01076929;GBDF01045317;XM_005414887;XM_013510099;XR_001232568 XP_005414944;XP_013365553 MODEL 8928878 protein-coding Slc18a1 solute carrier family 18 member A1 ENCODES a protein that exhibits enzyme binding (ortholog); monoamine:proton antiporter activity (ortholog); serotonin:sodium:chloride symporter activity (ortholog); INVOLVED IN cellular response to lithium ion (ortholog); dopamine uptake (ortholog); negative regulation of serotonin uptake (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); ovarian cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); secretory granule membrane (ortholog); synapse (ortholog) NW_004955403 43821978 43848403 - 102024521 AGCD01002789;GBDJ01219652;XM_005373626;XM_013513636;XM_013513637 XP_005373683;XP_013369090;XP_013369091 MODEL 8838948 ncrna LOC102010442 uncharacterized LOC102010442 NW_004955452 2929736 2933649 - 102010442 AGCD01043906;GBDF01177228;XR_262642 MODEL 8789953 protein-coding L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 ENCODES a protein that exhibits histone binding (ortholog); histone H4K20me1 reader activity (ortholog); histone H4K20me2 reader activity (ortholog); INVOLVED IN chromatin organization (ortholog); ectoderm development (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); medulloblastoma (ortholog); FOUND IN nucleus (ortholog) NW_004955413 26831065 26847638 + 102016367 AGCD01014482;GBDF01122961;XM_005379342;XM_013511353 XP_005379399;XP_013366807 MODEL 8827310 protein-coding Tsku tsukushi, small leucine rich proteoglycan ENCODES a protein that exhibits transforming growth factor beta binding (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); camera-type eye development (ortholog); cholesterol efflux (ortholog); ASSOCIATED WITH Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN extracellular region (ortholog) NW_004955414 15166349 15178284 - 102013919 AGCD01015181;GBBH01001334;XM_005379848;XM_005379849 XP_005379905;XP_005379906 MODEL 8801185 ncrna LOC102009289 uncharacterized LOC102009289 NW_004955422 20690361 20700604 - 102009289 AGCD01023085;AGCD01023086;GBCB01050340;XR_260904 MODEL 8960796 protein-coding Tex264 testis expressed 264, ER-phagy receptor ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN protein-DNA covalent cross-linking repair (ortholog); reticulophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN autophagosome membrane (ortholog); chromosome (ortholog); cytosol (ortholog) NW_004955532 3278214 3306045 + 102018325 AGCD01070276;GBCQ01010042;GBDI01017838;XM_005410319 XP_005410376 MODEL 8915488 ncrna LOC102012860 uncharacterized LOC102012860 NW_004955418 16415786 16489113 - 102012860 AGCD01019124;GBDF01307770;XR_001233536;XR_260562;XR_260563 MODEL 39132407 snrna U6 U6 spliceosomal RNA 8754407 protein-coding Sigirr single Ig and TIR domain containing INVOLVED IN acute-phase response (ortholog); negative regulation of chemokine production (ortholog); negative regulation of cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH colorectal cancer (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN membrane (ortholog) NW_004955476 11603375 11610606 + 102023587 AGCD01055466;GBCE01074106;XM_005401866;XM_013502933;XM_013502934;XM_013502935 XP_005401923;XP_013358387;XP_013358388;XP_013358389 MODEL 9056785 protein-coding Gspt1 G1 to S phase transition 1 ENCODES a protein that exhibits GTPase activity (ortholog); translation release factor activity (ortholog); INVOLVED IN regulation of translational termination (ortholog); translational termination (ortholog); PARTICIPATES IN translation termination pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytosolic ribosome (ortholog); translation release factor complex (ortholog) NW_004955442 6704272 6740207 + 102023852 AGCD01037595;AGCD01037596;GBDF01090009;XM_005391152;XM_005391153;XM_005391154;XM_005391155;XM_005391156;XM_005391157 XP_005391209;XP_005391210;XP_005391211;XP_005391212;XP_005391213;XP_005391214 MODEL 8720440 protein-coding LOC102012491 kinesin-like protein KIF13B NW_004955802 3103 18233 - 102012491 AGCD01078376;GBDK01191507;GBDK01191509;XM_005415115 XP_005415172 MODEL 8975375 protein-coding S1pr1 sphingosine-1-phosphate receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); G protein-coupled receptor binding (ortholog); sphingolipid binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); angiogenesis (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; platelet-derived growth factor signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Cardiomegaly (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog); presynapse (ortholog) NW_004955435 5880266 5882823 + 102008975 AGCD01032903;GBDI01225054;XM_013516565 XP_013372019 MODEL 9031527 protein-coding Tnfrsf4 TNF receptor superfamily member 4 ENCODES a protein that exhibits tumor necrosis factor receptor activity (ortholog); INVOLVED IN cellular defense response (ortholog); inflammatory response (ortholog); negative regulation of activation-induced cell death of T cells (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); brain disease (ortholog); cervical squamous cell carcinoma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955486 9565424 9569836 + 102028422 AGCD01059191;GBCQ01013911;XM_005404247;XM_005404248 XP_005404304;XP_005404305 MODEL 8988024 protein-coding CUNH6orf141 chromosome unknown C6orf141 homolog NW_004955410 33414621 33420002 - 102029157 AGCD01011370;GBCE01002650;XM_013510688;XM_013510689;XM_013510690;XM_013510691;XM_013510692;XM_013510693 XP_013366142;XP_013366143;XP_013366144;XP_013366145;XP_013366146;XP_013366147 MODEL 8824098 protein-coding Blvra biliverdin reductase A ENCODES a protein that exhibits biliberdin reductase (NADH) activity (ortholog); biliverdin reductase (NADPH) activity (ortholog); biliverdin reductase [NAD(P)H] activity (ortholog); INVOLVED IN apoptotic DNA fragmentation (ortholog); canonical NF-kappaB signal transduction (ortholog); chemotaxis (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; hereditary coproporphyria pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholestasis (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955460 129077 167345 - 102010875 AGCD01048335;AGCD01048336;AGCD01048337;GBDI01175001;XM_005397710 XP_005397767 MODEL 10149991 ncrna LOC106147293 uncharacterized LOC106147293 NW_004955540 3346263 3352086 + 106147293 AGCD01071337;XR_001232121 MODEL 8963481 protein-coding L3mbtl3 L3MBTL histone methyl-lysine binding protein 3 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); methylation-dependent protein binding (ortholog); INVOLVED IN erythrocyte maturation (ortholog); granulocyte differentiation (ortholog); macrophage differentiation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955436 10900521 11014259 + 102016416 AGCD01033799;AGCD01033800;AGCD01033801;AGCD01033802;AGCD01033803;AGCD01033804;GBBH01036968;GBCB01076996;XM_013516682 XP_013372136 MODEL 8950630 ncrna LOC102005172 uncharacterized LOC102005172 NW_004955436 16334399 16358588 + 102005172 AGCD01033914;AGCD01033915;GBDK01148627;XR_001234980 MODEL 8887353 protein-coding Nr1h2 nuclear receptor subfamily 1 group H member 2 ENCODES a protein that exhibits apolipoprotein A-I receptor binding (ortholog); ATPase binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); lipid homeostasis (ortholog); lipid metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atherosclerosis (ortholog); cholestasis (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955559 731630 736973 - 102020726 AGCD01073609;GBDI01061760;XM_013509031;XM_013509032 XP_013364485;XP_013364486 MODEL 8868369 protein-coding Duox1 dual oxidase 1 ENCODES a protein that exhibits calcium ion binding (ortholog); FAD binding (ortholog); heme binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cuticle development (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cell leading edge (ortholog); cell surface (ortholog) NW_004955409 8228754 8256575 - 102026407 AGCD01009388;AGCD01009389;GBBH01189153;GBDI01081510;XM_005377149;XM_013510312;XM_013510313 XP_005377206;XP_013365766;XP_013365767 MODEL 9044067 pseudo LOC102021266 zinc finger CCHC-type and RNA-binding motif-containing protein 1 pseudogene NW_004955509 31706 32464 + 102021266 AGCD01065925 MODEL 8720387 protein-coding Fgf7 fibroblast growth factor 7 ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); branching involved in salivary gland morphogenesis (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); PARTICIPATES IN glypican signaling pathway; ASSOCIATED WITH cervical squamous cell carcinoma (ortholog); cleft lip (ortholog); cleft palate (ortholog); FOUND IN extracellular region (ortholog); GABA-ergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955409 4633542 4686768 - 102007739 AGCD01009294;AGCD01009295;GBDI01327012;XM_005376685;XM_005376686;XM_013510298 XP_005376742;XP_005376743;XP_013365752 MODEL 8784244 protein-coding LOC102009660 protein HIRA ENCODES a protein that exhibits histone binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN gastrulation (ortholog); muscle cell differentiation (ortholog); osteoblast differentiation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiac Fibrosis (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); HIR complex (ortholog); nucleoplasm (ortholog) NW_004955442 18581370 18673590 + 102009660 AGCD01038011;AGCD01038012;GBCQ01129723;GBDI01264132;XM_005391780 XP_005391837 MODEL 8780315 protein-coding Evc2 EvC ciliary complex subunit 2 INVOLVED IN smoothened signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); FOUND IN ciliary membrane (ortholog); cilium (ortholog); nucleus (ortholog) NW_004955514 4332624 4430844 + 102023182 AGCD01067131;AGCD01067132;AGCD01067133;GBDK01357154;XM_005408823;XM_005408825;XM_005408826;XM_005408827;XM_013506842;XM_013506843;XM_013506844 XP_005408880;XP_005408882;XP_005408883;XP_005408884;XP_013362296;XP_013362297;XP_013362298 MODEL 39132735 snrna U6 U6 spliceosomal RNA 8954218 pseudo LOC102003393 zinc finger protein 14-like NW_004955569 1162650 1186999 - 102003393 AGCD01074643;XM_005413495 MODEL 8817392 protein-coding Tubgcp6 tubulin gamma complex component 6 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule nucleation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN centrosome (ortholog); gamma-tubulin ring complex (ortholog) NW_004955413 33252418 33272593 - 102014658 AGCD01014660;AGCD01014661;GBCB01089216;XM_005379671 XP_005379728 MODEL 8851986 ncrna LOC102018682 uncharacterized LOC102018682 NW_004955405 39905538 39909717 + 102018682 AGCD01005503;GBDJ01111460;XR_259449 MODEL 8736981 protein-coding Gata2 GATA binding protein 2 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN cell differentiation (ortholog); cell differentiation in hindbrain (ortholog); cell fate determination (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); anemia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955429 15326551 15334774 + 102024036 AGCD01028802;AGCD01028803;GBCQ01040479;GBDJ01007694;XM_005387040 XP_005387097 MODEL 8725807 pseudo LOC102025172 vasculin pseudogene NW_004955540 1909030 1917626 + 102025172 AGCD01071308;XR_264822 MODEL 8895145 protein-coding Il13 interleukin 13 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-13 receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adenoid hypertrophy (ortholog); alcoholic hepatitis (ortholog); FOUND IN cytoplasm (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955408 4046406 4049795 + 102030278 AGCD01008086;GBBH01173848;XM_005376104;XM_013508342 XP_005376161;XP_013363796 MODEL 8926213 protein-coding Lhx4 LIM homeobox 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); methyl-CpG binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); medial motor column neuron differentiation (ortholog); motor neuron axon guidance (ortholog); ASSOCIATED WITH combined or isolated pituitary hormone deficiency 1 (ortholog); combined pituitary hormone deficiency 4 (ortholog); genetic disease (ortholog) NW_004955406 19457658 19470875 + 102010972 AGCD01006082;GBDF01262146;XM_013503151 XP_013358605 MODEL 39132860 snrna U6 U6 spliceosomal RNA 8753350 pseudo LOC102003398 ubiquitin domain-containing protein 2 pseudogene NW_004955633 68363 69344 + 102003398 AGCD01077591 MODEL 8993455 protein-coding Sumo1 small ubiquitin like modifier 1 ENCODES a protein that exhibits enzyme binding (ortholog); potassium channel regulator activity (ortholog); protein tag activity (ortholog); INVOLVED IN cellular response to cadmium ion (ortholog); cellular response to heat (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN sumoylation pathway; ASSOCIATED WITH cervical cancer (ortholog); cleft lip (ortholog); cleft palate (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); fibrillar center (ortholog) NW_004955457 12538974 12565803 + 102009150 AGCD01047019;AGCD01047020;GBCQ01005483;XM_005397063 XP_005397120 MODEL 8786459 pseudo LOC102015937 replication protein A 70 kDa DNA-binding subunit pseudogene NW_004955412 29948306 29949423 - 102015937 AGCD01013287;XR_260031 MODEL 8729357 ncrna LOC102004468 uncharacterized LOC102004468 NW_004955413 29719091 29721582 + 102004468 AGCD01014592;GBDF01189455;XR_001233035;XR_001233036 MODEL 8776719 protein-coding LOC102022000 uncharacterized LOC102022000 NW_004955429 15258958 15261931 - 102022000 AGCD01028800;GBCQ01069001;XM_005387257 XP_005387314 MODEL 8850637 pseudo LOC102007759 rho-related GTP-binding protein RhoG-like NW_004955475 10913053 10914439 + 102007759 AGCD01055126 MODEL 39133673 snrna U4 U4 spliceosomal RNA 9002678 protein-coding Qser1 glutamine and serine rich 1 ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN chromosome (ortholog) NW_004955422 13207000 13287585 - 102025916 AGCD01022815;AGCD01022816;AGCD01022817;GBCE01001035;GBDF01236338;XM_005384170 XP_005384227 MODEL 8822073 pseudo LOC102017862 olfactory receptor 502-like NW_004955414 23701731 23702443 - 102017862 AGCD01015518 MODEL 9025864 protein-coding Kdm5a lysine demethylase 5A ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); facultative heterochromatin formation (ortholog); male gonad development (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia areata (ortholog); ankylosing spondylitis (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog); protein-DNA complex (ortholog) NW_004955454 6774308 6865047 + 102016233 AGCD01045268;AGCD01045269;AGCD01045270;AGCD01045271;GBDF01221368;XM_005396019;XM_005396020;XM_013520162;XM_013520163;XM_013520164 XP_005396076;XP_005396077;XP_013375616;XP_013375617;XP_013375618 MODEL 9050234 protein-coding Lrrc53 leucine rich repeat containing 53 NW_004955423 18141159 18204497 + 102030440 AGCD01023866;XM_013514452 XP_013369906 MODEL 8791245 protein-coding Dll1 delta like canonical Notch ligand 1 ENCODES a protein that exhibits Notch binding (ortholog); receptor ligand activity (ortholog); scaffold protein binding (ortholog); INVOLVED IN astrocyte development (ortholog); cell-cell signaling (ortholog); cerebellar molecular layer formation (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); cytoplasmic vesicle (ortholog) NW_004955411 3478943 3486541 + 102017105 AGCD01011552;GBDK01317392;XM_005377625 XP_005377682 MODEL 9011438 protein-coding Nr1h3 nuclear receptor subfamily 1 group H member 3 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); bile acid metabolic process (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); atherosclerosis (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955422 940310 954170 - 102024242 AGCD01022442;GBDJ01060920;XM_005383980;XM_013513923;XM_013513924;XM_013513925;XM_013513926;XM_013513927;XM_013513928;XM_013513929;XM_013513930 XP_005384037;XP_013369377;XP_013369378;XP_013369379;XP_013369380;XP_013369381;XP_013369382;XP_013369383;XP_013369384 MODEL 8831527 protein-coding Gja9 gap junction protein alpha 9 NW_004955452 16498189 16500190 - 102018558 AGCD01044514;XM_013519619 XP_013375073 MODEL 8968225 protein-coding LOC102012862 2'-5'-oligoadenylate synthase 1-like NW_004955482 9327058 9336478 + 102012862 AGCD01057565;AGCD01081652;GBDI01244959;XM_005403208 XP_005403265 MODEL 39132409 snrna U6 U6 spliceosomal RNA 8879766 protein-coding Gspt2 G1 to S phase transition 2 ENCODES a protein that exhibits GTPase activity (ortholog); translation release factor activity (ortholog); INVOLVED IN translational termination (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytosol (ortholog); translation release factor complex (ortholog) NW_004955543 2879974 2882473 - 102019326 AGCD01071665;GBCC01017842;XM_013508134 XP_013363588 MODEL 8861038 protein-coding LOC102019047 Golgi apparatus membrane protein TVP23 homolog B NW_004955467 2126184 2148053 + 102019047 AGCD01051302;GBBH01035105;XM_005399326 XP_005399383 MODEL 8711111 protein-coding CUNH6orf201 chromosome unknown C6orf201 homolog NW_004955465 9303368 9339691 - 102011518 AGCD01050489;AGCD01050490;GBDF01006952;XM_005398888 XP_005398945 MODEL 8793798 protein-coding Wwp1 WW domain containing E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN anchoring junction (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955417 4011302 4064584 + 102006455 AGCD01017935;AGCD01017936;AGCD01017937;GBCC01046163;XM_013512748;XM_013512749;XM_013512750 XP_013368202;XP_013368203;XP_013368204 MODEL 39132862 snrna U6 U6 spliceosomal RNA 8983611 ncrna LOC102003724 uncharacterized LOC102003724 NW_004955452 17445620 17459241 - 102003724 AGCD01044554;AGCD01044555;GBDI01162489;XR_262704 MODEL 8992289 protein-coding Slc6a15 solute carrier family 6 member 15 ENCODES a protein that exhibits alanine:sodium symporter activity (ortholog); branched-chain amino acid:sodium symporter activity (ortholog); L-asparagine:sodium symporter activity (ortholog); INVOLVED IN L-leucine transport (ortholog); neutral amino acid transport (ortholog); proline transport (ortholog); ASSOCIATED WITH high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN membrane (ortholog) NW_004955405 22821931 22846420 - 102004034 AGCD01005106;GBDJ01388542;XM_013518066 XP_013373520 MODEL 8831882 protein-coding Slc18a2 solute carrier family 18 member A2 ENCODES a protein that exhibits amine transmembrane transporter activity (ortholog); enzyme binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN aminergic neurotransmitter loading into synaptic vesicle (ortholog); cellular response to ammonium ion (ortholog); cellular response to xenobiotic stimulus (ortholog); PARTICIPATES IN dopamine biosynthetic pathway; epinephrine biosynthetic pathway; norepinephrine biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell body (ortholog) NW_004955431 21949553 21979679 + 102028670 AGCD01030506;AGCD01030507;GBBH01203229;XM_005387871;XM_005387872;XM_013515846 XP_005387928;XP_005387929;XP_013371300 MODEL 39133113 snrna U6 U6 spliceosomal RNA 8824987 protein-coding Sumo2 small ubiquitin like modifier 2 ENCODES a protein that exhibits nuclear retinoid X receptor binding (ortholog); SUMO transferase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) NW_004955553 2045277 2066023 - 102022547 AGCD01072912;AGCD01072913;AGCD01072914;AGCD01072915;GBBH01031321;GBCC01008029;XM_005412281 XP_005412338 MODEL 8702310 protein-coding Tex28 testis expressed 28 ASSOCIATED WITH periventricular nodular heterotopia (ortholog) NW_004955580 781339 791284 - 102009777 AGCD01075622;XM_005414223 XP_005414280 MODEL 8812762 protein-coding Smim17 small integral membrane protein 17 NW_004955567 248113 256309 - 102011254 AGCD01074392;AGCD01074393;XM_005413284 XP_005413341 MODEL 9004275 protein-coding Duox2 dual oxidase 2 ENCODES a protein that exhibits calcium ion binding (ortholog); NAD(P)H oxidase H2O2-forming activity (ortholog); INVOLVED IN adenohypophysis morphogenesis (ortholog); bone mineralization (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); cholera (ortholog); FOUND IN anchoring junction (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955409 8270657 8288201 + 102026725 AGCD01009391;AGCD01009392;AGCD01009393;GBDI01081489;XM_013510065 XP_013365519 MODEL 8941553 ncrna LOC102009664 uncharacterized LOC102009664 NW_004955566 1804100 1820455 - 102009664 AGCD01074369;GBDI01312924;XR_001232397;XR_001232398;XR_001232399;XR_265024 MODEL 9011515 protein-coding Siglec1 sialic acid binding Ig like lectin 1 ENCODES a protein that exhibits virion binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); clathrin-dependent endocytosis of virus by host cell (ortholog); negative regulation of phagocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN early endosome (ortholog); endocytic vesicle (ortholog); late endosome (ortholog) NW_004955415 14539284 14560614 - 102028630 AGCD01016300;GBBH01214194;XM_005380797;XR_001233251 XP_005380854 MODEL 8982458 pseudo LOC102012495 quinone oxidoreductase pseudogene NW_004955405 19872 21878 + 102012495 AGCD01004551 MODEL 8957407 pseudo LOC102017864 selenoprotein K-like NW_004955415 7938080 7938777 - 102017864 AGCD01016059 MODEL 8700618 protein-coding LOC102014035 ral guanine nucleotide dissociation stimulator-like NW_004955413 4784689 4789519 + 102014035 AGCD01013628;GBDF01155508;XM_005378864 XP_005378921 MODEL 8738533 protein-coding Blvrb biliverdin reductase B ENCODES a protein that exhibits biliverdin reductase [NAD(P)H] activity (ortholog); FMN reductase (NADH) activity (ortholog); FMN reductase (NADPH) activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); bone marrow development (ortholog); cell fate specification (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN terminal bouton; cytoplasm (ortholog); cytosol (ortholog) NW_004955578 813834 834675 + 102012040 AGCD01075498;GBCE01001251;XM_005414044 XP_005414101 MODEL 8958681 pseudo LOC102018687 translationally-controlled tumor protein pseudogene NW_004955454 7152912 7153484 - 102018687 AGCD01045283;XM_005396028 MODEL 8719373 protein-coding Tbx21 T-box transcription factor 21 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN leukocyte migration involved in inflammatory response (ortholog); lymphocyte migration (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH allergic asthma (ortholog); aspirin-induced respiratory disease (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); neuronal cell body (ortholog); nucleus (ortholog) NW_004955451 13315237 13317888 - 102014732 AGCD01043467;GBCB01014995;GBDI01106988;XM_013519056 XP_013374510 MODEL 8881076 protein-coding LOC102003401 protein MTO1 homolog, mitochondrial-like NW_004955981 5824 8486 + 102003401 AGCD01078801;AGCD01078802;XM_013510212 XP_013365666 MODEL 8785110 ncrna LOC102014036 uncharacterized LOC102014036 NW_004955413 24324493 24370270 + 102014036 AGCD01014360;AGCD01014361;AGCD01014362;GBBH01160502;XR_001232986;XR_001232987;XR_260104 MODEL 8902660 protein-coding LOC102021267 olfactory receptor 5AL1-like NW_004955511 1538367 1539479 + 102021267 AGCD01066371;XM_005408235 XP_005408292 MODEL 9017804 pseudo LOC102022001 olfactory receptor 4A15-like NW_004955511 66830 67734 - 102022001 AGCD01066313 MODEL 39133697 snrna U4 U4 spliceosomal RNA 9035656 protein-coding Taf13 TATA-box binding protein associated factor 13 ENCODES a protein that exhibits DNA binding (ortholog); TBP-class protein binding (ortholog); INVOLVED IN mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); RNA polymerase II preinitiation complex assembly (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive intellectual developmental disorder 60 (ortholog); autosomal recessive primary microcephaly (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955435 12488578 12496894 - 102023068 AGCD01033149;GBBH01069822;XM_005388844 XP_005388901 MODEL 730469065 scarna SCARNA20 Small Cajal body specific RNA 20 730469393 misc_rna Evf-2_5p Embryonic ventral forebrain-2 long ncRNA 8970010 protein-coding Tnfrsf6b TNF receptor superfamily member 6b ENCODES a protein that exhibits receptor decoy activity (ortholog); ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog); FOUND IN decoy receptor complex (ortholog) NW_004955528 529817 531577 - 102007051 AGCD01069537;GBCE01057126;XM_005409952 XP_005410009 MODEL 8738608 protein-coding LOC102020167 interferon-inducible GTPase 5 NW_004955555 1452146 1455263 + 102020167 AGCD01073082;XM_005412455 XP_005412512 MODEL 8933620 protein-coding L3mbtl4 L3MBTL histone methyl-lysine binding protein 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955402 4927453 5168415 + 102013780 AGCD01000129;AGCD01000130;GBDF01179172;XM_013518523 XP_013373977 MODEL 9008796 pseudo LOC102012863 FH1/FH2 domain-containing protein 1 pseudogene NW_004955485 3175160 3181031 - 102012863 AGCD01058533 MODEL 8777958 protein-coding LOC102025174 chromosome unknown open reading frame, human C16orf95 ASSOCIATED WITH esophageal cancer (ortholog); stomach cancer (ortholog); thymoma (ortholog) NW_004955541 1795301 1807870 - 102025174 AGCD01071388;GBDF01003427;XM_005410998;XM_005410999;XM_005411000 XP_005411055;XP_005411056;XP_005411057 MODEL 8920872 ncrna LOC102012499 uncharacterized LOC102012499 NW_004955407 30651094 30671049 - 102012499 AGCD01007639;GBDJ01066236;XR_001231688;XR_259595 MODEL 8884264 protein-coding Duoxa1 dual oxidase maturation factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN hydrogen peroxide biosynthetic process (ortholog); hydrogen peroxide metabolic process (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cell leading edge (ortholog); endoplasmic reticulum (ortholog) NW_004955409 8256707 8266891 + 102023560 AGCD01009390;AGCD01009391;GBCE01009592;XM_005376741;XM_005376742;XM_005376743;XM_013510336;XM_013510337 XP_005376798;XP_005376799;XP_005376800;XP_013365790;XP_013365791 MODEL 8844229 protein-coding LOC102019053 olfactory receptor 51A7-like NW_004955414 20454679 20455620 + 102019053 AGCD01015375;XM_005380057 XP_005380114 MODEL 8963878 protein-coding LOC102005173 trace amine-associated receptor 2 NW_004955436 13191916 13192815 - 102005173 AGCD01033855;XM_005415330 XP_005415387 MODEL 8759185 protein-coding Il13ra1 interleukin 13 receptor subunit alpha 1 ENCODES a protein that exhibits interleukin-13 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); interleukin-13-mediated signaling pathway (ortholog); positive regulation of B cell proliferation (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH atopic dermatitis (ortholog); Breast Cancer, Familial (ortholog); bronchiolitis obliterans (ortholog); FOUND IN interleukin-13 receptor complex (ortholog); interleukin-4 receptor complex (ortholog); plasma membrane (ortholog) NW_004955534 1157758 1205158 - 102016635 AGCD01070487;GBDI01133443;XM_005410457;XM_013507707 XP_005410514;XP_013363161 MODEL 8975448 protein-coding LOC102012865 olfactory receptor 4C12-like NW_004955422 140434 143718 - 102012865 AGCD01022395;XM_005383937 XP_005383994 MODEL 8743671 protein-coding LOC102015939 apolipoprotein L3-like NW_004955413 22651953 22664939 + 102015939 AGCD01014311;AGCD01014312;GBDK01241031;XM_005379149;XM_005379150;XM_005379151;XM_005379152;XM_013511671;XM_013511672 XP_005379206;XP_005379207;XP_005379208;XP_005379209;XP_013367125;XP_013367126 MODEL 39132864 snrna U6 U6 spliceosomal RNA 8968151 protein-coding LOC102009291 uncharacterized LOC102009291 NW_004955495 1844763 1851588 - 102009291 AGCD01061735;GBBH01140669;XM_005405612;XM_005405613;XM_005405614;XM_013505148 XP_005405669;XP_005405670;XP_005405671;XP_013360602 MODEL 9004013 protein-coding Fgf8 fibroblast growth factor 8 ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); type 1 fibroblast growth factor receptor binding (ortholog); INVOLVED IN aorta morphogenesis (ortholog); blood vessel remodeling (ortholog); bone development (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH 22q11 Deletion Syndrome (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955485 8517412 8521732 + 102017343 AGCD01058719;GBDF01030332;XM_005403931 XP_005403988 MODEL 8878256 protein-coding Slc6a16 solute carrier family 6 member 16 ENCODES a protein that exhibits AP-3 adaptor complex binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog) NW_004955559 1493030 1509213 + 102021607 AGCD01073647;GBDF01044814;XM_013508998 XP_013364452 MODEL 39132736 snrna U6 U6 spliceosomal RNA 9020507 protein-coding S1pr2 sphingosine-1-phosphate receptor 2 ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); filopodium assembly (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 68 (ortholog); disease of cellular proliferation (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); presynapse (ortholog) NW_004955495 1528963 1530527 - 102029193 AGCD01061698;GBBH01149946;GBDK01431367;XM_005405584 XP_005405641 MODEL 8917228 protein-coding Slc18a3 solute carrier family 18 member A3 ENCODES a protein that exhibits acetylcholine transmembrane transporter activity (ortholog); acetylcholine:proton antiporter activity (ortholog); monoamine:proton antiporter activity (ortholog); INVOLVED IN acetylcholine transport (ortholog); acetylcholine uptake (ortholog); neurotransmitter loading into synaptic vesicle (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); Binge Drinking (ortholog); FOUND IN perikaryon; AP-1 adaptor complex (ortholog); AP-2 adaptor complex (ortholog) NW_004955556 696779 698869 - 102029334 AGCD01073179;XM_005412568 XP_005412625 MODEL 8930133 protein-coding Lrrc55 leucine rich repeat containing 55 ENCODES a protein that exhibits potassium channel activator activity (ortholog); transmembrane transporter binding (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN voltage-gated potassium channel complex (ortholog) NW_004955511 2278638 2287435 + 102014384 AGCD01066396;GBDF01113350;XM_013506516 XP_013361970 MODEL 10127660 ncrna LOC106147294 uncharacterized LOC106147294 NW_004955540 1656800 1659940 + 106147294 AGCD01071306;AGCD01071307;GBDF01253459;XR_001232122 MODEL 8787080 protein-coding Sumo3 small ubiquitin like modifier 3 ENCODES a protein that exhibits protein tag activity (ortholog); SUMO transferase activity (ortholog); INVOLVED IN positive regulation of ubiquitin-dependent protein catabolic process (ortholog); protein localization to nucleus (ortholog); protein sumoylation (ortholog); ASSOCIATED WITH melanoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955407 41725992 41732692 - 102009803 AGCD01007876;AGCD01007877;GBCE01028259;GBDF01088717;XM_013505485 XP_013360939 MODEL 8989125 protein-coding LOC102009665 antileukoproteinase NW_004955445 12093023 12095345 + 102009665 AGCD01039735;GBDI01080100;XM_013518386 XP_013373840 MODEL 9024343 protein-coding Nr1h4 nuclear receptor subfamily 1 group H member 4 ENCODES a protein that exhibits bile acid binding (ortholog); bile acid nuclear receptor activity (ortholog); chenodeoxycholic acid binding (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid metabolic process (ortholog); cell-cell junction assembly (ortholog); PARTICIPATES IN bile acid signaling pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); Animal Disease Models (ortholog); atherosclerosis (ortholog); FOUND IN euchromatin (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955405 36160360 36236258 + 102021836 AGCD01005411;AGCD01005412;AGCD01005413;GBCQ01036446;XM_005374533;XM_005374534;XM_005374535;XM_005374536;XM_005374537 XP_005374590;XP_005374591;XP_005374592;XP_005374593;XP_005374594 MODEL 8860869 protein-coding Tufm Tu translation elongation factor, mitochondrial ENCODES a protein that exhibits translation elongation factor activity (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); response to ethanol (ortholog); translational elongation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); combined oxidative phosphorylation deficiency 4 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955493 6619205 6623780 + 102015534 AGCD01061122;GBDI01059775;XM_005405167 XP_005405224 MODEL 8779170 protein-coding Gata3 GATA binding protein 3 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); aortic valve morphogenesis (ortholog); axon guidance (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; Notch signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 24448446 24477885 + 102010495 AGCD01022216;AGCD01022217;GBCE01042494;XM_005383881;XM_005383882;XM_005383883 XP_005383938;XP_005383939;XP_005383940 MODEL 730469197 scarna SCARNA21 Small Cajal body specific RNA 21 39132410 snrna U6 U6 spliceosomal RNA 39131528 protein-coding LHX4 LIM homeobox 4 8912475 protein-coding Gjb1 gap junction protein beta 1 ENCODES a protein that exhibits gap junction channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN epididymis development (ortholog); purine ribonucleotide transport (ortholog); ASSOCIATED WITH adenoma (ortholog); autoimmune thyroiditis (ortholog); axonal neuropathy (ortholog); FOUND IN cytoplasm (ortholog); gap junction (ortholog); lateral plasma membrane (ortholog) NW_004955475 10779415 10787910 + 102004275 AGCD01055115;GBCQ01005957;XM_005401654;XM_005401655 XP_005401711;XP_005401712 MODEL 8795893 pseudo LOC102023040 actin-related protein 2/3 complex subunit 1A-like NW_004955420 13377017 13378758 + 102023040 AGCD01020920 MODEL 8886345 pseudo LOC102007760 uncharacterized LOC102007760 NW_004955476 4007426 4119894 - 102007760 AGCD01055264;AGCD01055265;AGCD01055266 MODEL 8929831 ncrna LOC102004472 uncharacterized LOC102004472 NW_004955475 4433519 4450120 - 102004472 AGCD01054880;GBCE01047752;XR_263611 MODEL 8913820 ncrna LOC102003727 uncharacterized LOC102003727 NW_004955453 14568514 14584297 - 102003727 AGCD01044871;GBDF01078382;XR_262740 MODEL 8949666 protein-coding Qsox1 quiescin sulfhydryl oxidase 1 ENCODES a protein that exhibits FAD binding (ortholog); flavin-dependent sulfhydryl oxidase activity (ortholog); protein disulfide isomerase activity (ortholog); INVOLVED IN extracellular matrix assembly (ortholog); negative regulation of macroautophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN extracellular exosome (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955406 19363938 19402134 + 102023111 AGCD01006078;AGCD01006079;AGCD01006080;AGCD01006081;AGCD01006082;GBDF01002852;GBDI01262267;XM_005375463;XM_013521310 XP_005375520;XP_013376764 MODEL 39133114 snrna U6 U6 spliceosomal RNA 8709690 protein-coding Kdm5b lysine demethylase 5B ENCODES a protein that exhibits DNA binding (ortholog); histone binding (ortholog); histone H3K4 demethylase activity (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); amenorrhea (ortholog); atrial heart septal defect (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); ribonucleoprotein complex (ortholog) NW_004955406 38755220 38823094 - 102028822 AGCD01006609;AGCD01006610;GBDK01322713;XM_005375227 XP_005375284 MODEL 8784308 protein-coding Dll3 delta like canonical Notch ligand 3 ENCODES a protein that exhibits Notch binding (ortholog); INVOLVED IN compartment pattern specification (ortholog); negative regulation of astrocyte differentiation (ortholog); negative regulation of neurogenesis (ortholog); PARTICIPATES IN altered Notch signaling pathway involving the main players; Notch signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); Congenital Abnormalities (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN plasma membrane (ortholog) NW_004955468 70714 78831 - 102013276 AGCD01051680;AGCD01051681;GBDF01075164;XM_005400283 XP_005400340 MODEL 8996869 protein-coding Tslig1 tRNA splicing ligase complex subunit 1 ENCODES a protein that exhibits protein guanylyltransferase activity (ortholog); RNA ligase (GTP) activity (ortholog); INVOLVED IN IRE1-mediated unfolded protein response (ortholog); mRNA splicing, via endonucleolytic cleavage and ligation (ortholog); RNA splicing, via endonucleolytic cleavage and ligation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN catalytic complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955452 10944281 10955250 - 102026285 AGCD01044317;GBDJ01080976;XM_005395081;XM_005395082;XM_013519548 XP_005395138;XP_005395139;XP_013375002 MODEL 8777151 protein-coding Tex29 testis expressed 29 ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955404 1405904 1745715 - 102014637 AGCD01003224;AGCD01003225;AGCD01003226;AGCD01003227;AGCD01003228;GBDK01178785;XM_013515713;XM_013515715 XP_013371167;XP_013371169 MODEL 8700766 protein-coding Smim18 small integral membrane protein 18 NW_004955463 7057648 7071593 + 102024774 AGCD01049709;AGCD01049710;GBBH01116730;XM_005398367;XM_013521494;XM_013521495 XP_005398424;XP_013376948;XP_013376949 MODEL 9050634 protein-coding Taf15 TATA-box binding protein associated factor 15 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA stabilization (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955481 10242839 10274961 + 102021127 AGCD01057138;GBDF01080958;XM_005402892;XM_013503452 XP_005402949;XP_013358906 MODEL 8952261 ncrna LOC102017871 uncharacterized LOC102017871 NW_004955416 29852903 29861728 + 102017871 AGCD01017668;GBDF01099351;XR_001233381;XR_260437 MODEL 8821152 pseudo LOC102010443 calnexin pseudogene NW_004955405 3150890 3152245 - 102010443 AGCD01004631 MODEL 8954983 protein-coding Gsr glutathione-disulfide reductase ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); glutathione binding (ortholog); glutathione-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN response to auditory stimulus; glutathione metabolic process (ortholog); response to activity (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; glutathione metabolic pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute kidney tubular necrosis (ortholog); Acute Lung Injury (ortholog); FOUND IN cytosol (ortholog); external side of plasma membrane (ortholog); mitochondrion (ortholog) NW_004955463 7130459 7153631 - 102025883 AGCD01049719;AGCD01049720;GBDJ01080630;XM_005398371 XP_005398428 MODEL 8719457 ncrna LOC102018688 uncharacterized LOC102018688 NW_004955406 40043515 40046054 + 102018688 AGCD01006652;GBCQ01091085;XR_259528 MODEL 8719190 protein-coding Lacc1 laccase domain multifunctional purine nucleosidase 1 ENCODES a protein that exhibits adenosine deaminase activity (ortholog); guanosine phosphorylase activity (ortholog); oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor (ortholog); INVOLVED IN nucleotide-binding oligomerization domain containing 2 signaling pathway (ortholog); pattern recognition receptor signaling pathway (ortholog); positive regulation of cytokine production involved in immune response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); nucleus (ortholog) NW_004955518 1794067 1809150 + 102009748 AGCD01067765;AGCD01067766;GBDF01277558;GBDF01277559;XM_005409073 XP_005409130 MODEL 39132411 snrna U6 U6 spliceosomal RNA 8812794 protein-coding Blzf1 basic leucine zipper nuclear factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN Golgi organization (ortholog); Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); nucleoplasm (ortholog) NW_004955462 7856650 7879659 - 102015699 AGCD01049309;GBDI01293361;XM_005398201;XM_005398202;XM_013521407;XM_013521408;XM_013521409 XP_005398258;XP_005398259;XP_013376861;XP_013376862;XP_013376863 MODEL 8968493 protein-coding Tbx22 T-box transcription factor 22 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Abruzzo-Erickson syndrome (ortholog); Breast Cancer, Familial (ortholog); cleft palate (ortholog); FOUND IN nucleus (ortholog) NW_004955529 541057 573486 + 102026670 AGCD01069641;XM_005410093 XP_005410150 MODEL 8735288 protein-coding Duoxa2 dual oxidase maturation factor 2 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN hydrogen peroxide biosynthetic process (ortholog); hydrogen peroxide metabolic process (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH congenital hypothyroidism (ortholog); familial thyroid dyshormonogenesis (ortholog); genetic disease (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); cell leading edge (ortholog) NW_004955409 8266873 8270486 - 102023009 AGCD01009391;GBDI01008400;XM_005376739;XM_005376740 XP_005376796;XP_005376797 MODEL 8868131 ncrna LOC102021271 uncharacterized LOC102021271 NW_004955433 9333586 9352335 + 102021271 AGCD01031611;GBDF01224018;XR_001234712;XR_261576 MODEL 9063365 ncrna LOC102022002 uncharacterized LOC102022002 NW_004955430 21709076 21728235 - 102022002 AGCD01029774;AGCD01029775;XR_001234548 MODEL 39132865 snrna U6 U6 spliceosomal RNA 8738028 ncrna LOC102009292 uncharacterized LOC102009292 NW_004955423 372935 383250 + 102009292 AGCD01023411;GBDI01297765;XR_260937 MODEL 39133699 snrna U4 U4 spliceosomal RNA 8894089 protein-coding Siglec15 sialic acid binding Ig like lectin 15 NW_004955402 31403765 31418954 + 102025196 AGCD01000788;GBCE01055940;XM_013510392 XP_013365846 MODEL 39132737 snrna U6 U6 spliceosomal RNA 8947875 protein-coding Slc18b1 solute carrier family 18 member B1 ENCODES a protein that exhibits monoamine:proton antiporter activity (ortholog); polyamine:proton antiporter activity (ortholog); INVOLVED IN serotonin uptake (ortholog); spermidine transport (ortholog); spermine transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN secretory granule membrane (ortholog); synaptic vesicle membrane (ortholog) NW_004955436 13286811 13316037 - 102025390 AGCD01033856;GBDK01322576;XM_005389219;XM_013516687;XM_013516688 XP_005389276;XP_013372141;XP_013372142 MODEL 8786018 protein-coding LOC102025178 uncharacterized LOC102025178 NW_004955546 1105712 1113339 + 102025178 AGCD01072041;GBDI01248776;XM_013508411;XM_013508412;XR_001232206 XP_013363865;XP_013363866 MODEL 8699521 protein-coding Tex30 testis expressed 30 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955404 8390635 8394761 + 102002987 AGCD01003352;GBDI01294125;GBDI01294139;XM_005374029 XP_005374086 MODEL 8792532 protein-coding Lhx5 LIM homeobox 5 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell proliferation in forebrain (ortholog); cell-cell signaling (ortholog); cerebellar Purkinje cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog) NW_004955482 9682671 9691155 - 102018930 AGCD01057581;XM_005403229 XP_005403286 MODEL 8834269 protein-coding LOC102003403 formin-like protein 1 NW_004955451 16903163 16906378 - 102003403 AGCD01043711;GBDF01002809;XM_005394500;XM_005394501;XM_013519234 XP_005394557;XP_005394558;XP_013374688 MODEL 9016990 protein-coding Gata4 GATA binding protein 4 ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); co-SMAD binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); atrial septum morphogenesis (ortholog); atrial septum primum morphogenesis (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); 46,XY sex reversal 3 (ortholog); acanthosis nigricans (ortholog); FOUND IN chromatin (ortholog); nuclear body (ortholog); nucleus (ortholog) NW_004955403 52958318 53029267 + 102029354 AGCD01003023;AGCD01003024;AGCD01003025;AGCD01003026;AGCD01003027;GBDF01085885;GBDF01085887;XM_005373824;XM_013514543;XM_013514548;XM_013514552 XP_005373881;XP_013369997;XP_013370002;XP_013370006 MODEL 8880737 ncrna LOC102019055 uncharacterized LOC102019055 NW_004955414 24422049 24443415 + 102019055 AGCD01015546;GBDF01207599;XR_260194 MODEL 8794738 pseudo LOC102012868 ubiquitin-like modifier-activating enzyme 1 pseudogene NW_004955494 8277150 8278221 - 102012868 AGCD01061582 MODEL 9062899 pseudo LOC102007765 mitochondrial fission factor-like NW_004955416 10152452 10153091 + 102007765 AGCD01017109 MODEL 8893873 protein-coding LOC102015942 palmitoyltransferase ZDHHC3-like NW_004955413 32853796 32854516 + 102015942 AGCD01014647;GBDF01053989;XM_005379523 XP_005379580 MODEL 8775268 protein-coding Fgf9 fibroblast growth factor 9 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell signaling (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); cleft lip (ortholog); cleft palate (ortholog); FOUND IN basement membrane (ortholog); extracellular region (ortholog) NW_004955497 2199424 2232088 + 102015123 AGCD01062498;AGCD01062499;GBCQ01178042;XM_005406315 XP_005406372 MODEL 8705691 ncrna LOC102003728 uncharacterized LOC102003728 NW_004955454 12328311 12330494 + 102003728 AGCD01045409;XR_262791 MODEL 8723386 protein-coding CUNH7orf25 chromosome unknown C7orf25 homolog FOUND IN nucleoplasm (ortholog) NW_004955460 895201 897703 + 102013148 AGCD01048350;GBDF01090066;XM_005397716;XM_005397717;XM_005397720;XM_013521293 XP_005397773;XP_005397774;XP_005397777;XP_013376747 MODEL 8837191 protein-coding Tnfrsf8 TNF receptor superfamily member 8 ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to mechanical stimulus (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH AIDS-Related Opportunistic Infections (ortholog); anaplastic large cell lymphoma (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955486 1839642 1910080 - 102026750 AGCD01058964;AGCD01058965;AGCD01058966;AGCD01058967;AGCD01058968;AGCD01058969;AGCD01058970;AGCD01058971;AGCD01058972;GBDF01016443;GBDK01097531;XM_013504324;XM_013504325;XM_013504326 XP_013359778;XP_013359779;XP_013359780 MODEL 8798707 protein-coding Dus1l dihydrouridine synthase 1 like ENCODES a protein that exhibits tRNA-dihydrouridine16 synthase activity (ortholog); tRNA-dihydrouridine17 synthase activity (ortholog); INVOLVED IN tRNA dihydrouridine synthesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955506 1097255 1104918 + 102015747 AGCD01065245;GBDF01153424;XM_005407216;XM_005407217;XM_005407218;XM_005407219 XP_005407273;XP_005407274;XP_005407275;XP_005407276 MODEL 9041298 protein-coding S1pr3 sphingosine-1-phosphate receptor 3 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); inflammatory response (ortholog); negative regulation of establishment of endothelial barrier (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); FOUND IN plasma membrane (ortholog); presynapse (ortholog) NW_004955515 3024258 3035996 - 102018012 AGCD01067267;GBCE01095063;XM_005408882 XP_005408939 MODEL 8957917 protein-coding Sun1 Sad1 and UNC84 domain containing 1 ENCODES a protein that exhibits cytoskeleton-nuclear membrane anchor activity (ortholog); identical protein binding (ortholog); lamin binding (ortholog); INVOLVED IN centrosome localization (ortholog); homologous chromosome pairing at meiosis (ortholog); meiotic attachment of telomere to nuclear envelope (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); cervical cancer (ortholog); FOUND IN acrosomal membrane (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955460 8560824 8619142 + 102010559 AGCD01048527;AGCD01048528;GBDF01003757;XM_005397780;XM_005397781;XM_005397782;XM_005397783;XM_005397784;XM_005397785;XM_005397786;XM_005397787;XM_005397788;XM_005397789;XM_005397790;XM_005397791;XM_013521207 XP_005397837;XP_005397838;XP_005397839;XP_005397840;XP_005397841;XP_005397842;XP_005397843;XP_005397844;XP_005397845;XP_005397846;XP_005397847;XP_005397848;XP_013376661 MODEL 10348582 protein-coding LOC106147295 uncharacterized LOC106147295 NW_004955540 1707764 1739093 - 106147295 AGCD01071307;GBCB01130303;XM_013507919 XP_013363373 MODEL 8800042 protein-coding LOC102020170 olfactory receptor 5-like NW_004955567 184657 185601 + 102020170 AGCD01074385;XM_005413399 XP_005413456 MODEL 626189144 scarna SCARNA21 Small Cajal body specific RNA 21 9013499 protein-coding Tuft1 tuftelin 1 ENCODES a protein that exhibits structural constituent of skin epidermis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955589 817001 854492 - 102020069 AGCD01076183;GBCQ01003996;XM_005414569;XM_005414570 XP_005414626;XP_005414627 MODEL 8840774 protein-coding LOC102012500 uncharacterized LOC102012500 NW_004955456 6824286 6831920 + 102012500 AGCD01046378;GBDF01048469;XM_013520512;XR_001236319;XR_001236320 XP_013375966 MODEL 8948074 ncrna LOC102010445 uncharacterized LOC102010445 NW_004955406 13995073 13998877 - 102010445 AGCD01005956;GBDJ01024864;XR_001236437 MODEL 8784131 ncrna LOC102005180 uncharacterized LOC102005180 NW_004955540 2515392 2519809 + 102005180 AGCD01071321;GBDF01244999;XR_264826 MODEL 39132738 snrna U6 U6 spliceosomal RNA 8879592 protein-coding LOC102014040 olfactory receptor 2D2 NW_004955414 22804933 22805880 - 102014040 AGCD01015478;XM_005380513 XP_005380570 MODEL 8955547 protein-coding Il13ra2 interleukin 13 receptor subunit alpha 2 ENCODES a protein that exhibits cytokine receptor activity (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); immunoglobulin mediated immune response (ortholog); interleukin-13-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH allergic rhinitis (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955490 708144 758195 + 102026754 AGCD01060082;AGCD01060083;AGCD01060084;AGCD01060085;AGCD01060086;GBCE01123394;XM_005404624;XM_013504555;XM_013504556;XM_013504557;XM_013504558;XM_013504559;XM_013504560 XP_005404681;XP_013360009;XP_013360010;XP_013360011;XP_013360012;XP_013360013;XP_013360014 MODEL 8735940 protein-coding Tex35 testis expressed 35 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN microtubule cytoskeleton (ortholog); nucleus (ortholog) NW_004955406 17930460 17946364 + 102024085 AGCD01006016;GBDF01207826;XM_005374931;XM_005374933;XM_005374934;XM_013521079;XM_013521082;XR_001236493 XP_005374988;XP_005374990;XP_005374991;XP_013376533;XP_013376536 MODEL 8978668 protein-coding Slc6a17 solute carrier family 6 member 17 INVOLVED IN alanine transport (ortholog); brain development (ortholog); glycine transport (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 48 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955435 13668690 13717401 + 102015885 AGCD01033208;AGCD01033209;AGCD01033210;GBCQ01085126;XM_005388913;XM_013516399 XP_005388970;XP_013371853 MODEL 39132869 snrna U6 U6 spliceosomal RNA 8740501 protein-coding Bmal1 basic helix-loop-helix ARNT like 1 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); bHLH transcription factor binding (ortholog); DNA binding (ortholog); INVOLVED IN autophagy (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN chromatoid body (ortholog); CLOCK-BMAL transcription complex (ortholog); cytoplasm (ortholog) NW_004955414 28652663 28748360 + 102018716 AGCD01015682;AGCD01015683;AGCD01015684;AGCD01015685;GBDF01194319;XM_005380316;XM_005380317;XM_005380319;XM_005380321;XM_013511990;XM_013511991 XP_005380373;XP_005380374;XP_005380376;XP_005380378;XP_013367444;XP_013367445 MODEL 8877342 protein-coding Lrrc56 leucine rich repeat containing 56 ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Neoplasms (ortholog) NW_004955476 11493299 11507022 - 102017010 AGCD01055460;GBBH01165706;XM_013502922 XP_013358376 MODEL 9052679 protein-coding Kdm5c lysine demethylase 5C ENCODES a protein that exhibits histone H3K4 demethylase activity (ortholog); histone H3K4me/H3K4me2/H3K4me3 demethylase activity (ortholog); identical protein binding (ortholog); INVOLVED IN gene expression (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; renal cell carcinoma pathway; ASSOCIATED WITH Abdominal Pain (ortholog); Abnormal Reflexes (ortholog); anxiety disorder (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955475 243666 278064 - 102010996 AGCD01054684;GBBH01093550;XM_005401477;XM_005401478;XM_005401479;XM_005401482;XM_005401483;XM_013502866;XM_013502867 XP_005401534;XP_005401535;XP_005401536;XP_005401539;XP_005401540;XP_013358320;XP_013358321 MODEL 8859111 protein-coding Smim19 small integral membrane protein 19 ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955536 380062 384608 - 102005633 AGCD01070725;GBCB01001967;GBDK01136291;XM_013507726 XP_013363180 MODEL 8907336 protein-coding Wwp2 WW domain containing E3 ubiquitin protein ligase 2 ENCODES a protein that exhibits potassium channel inhibitor activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription regulator inhibitor activity (ortholog); INVOLVED IN extracellular transport (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of potassium ion export across plasma membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955484 6853820 6967261 - 102021879 AGCD01058297;AGCD01058298;AGCD01058299;AGCD01058300;GBCB01059211;XM_013503940;XM_013503941 XP_013359394;XP_013359395 MODEL 8872531 protein-coding Tslig2 tRNA splicing ligase complex subunit 2 INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); tRNA-splicing ligase complex (ortholog) NW_004955470 10223467 10234309 + 102026964 AGCD01052859;GBDF01118856;XM_005400782 XP_005400839 MODEL 8725640 pseudo LOC102017874 eukaryotic translation initiation factor 4E type 2 pseudogene NW_004955481 6307199 6311302 - 102017874 AGCD01057023 MODEL 8941081 protein-coding LOC102022006 putative histone-lysine N-methyltransferase PRDM6 NW_004955521 1207144 1292667 + 102022006 AGCD01068179;GBDF01076337;GBDK01358422;XM_013507093 XP_013362547 MODEL 8849203 protein-coding Taf1a TATA-box binding protein associated factor, RNA polymerase I subunit A INVOLVED IN regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN RNA polymerase transcription factor SL1 complex (ortholog) NW_004955520 1900802 1921350 + 102018636 AGCD01068068;AGCD01068069;GBBH01006250;XM_005409257;XM_005409258;XM_013507028;XM_013507029;XM_013507031 XP_005409314;XP_005409315;XP_013362482;XP_013362483;XP_013362485 MODEL 8973920 protein-coding LOC102009673 E3 ubiquitin-protein ligase UHRF1 NW_004955777 1489 17093 + 102009673 AGCD01078327;GBDF01156556;GBDF01156558;XM_005415110 XP_005415167 MODEL 8852080 protein-coding Nr1i2 nuclear receptor subfamily 1 group I member 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); nuclear receptor activity (ortholog); nuclear receptor binding (ortholog); INVOLVED IN cellular response to molecule of bacterial origin (ortholog); cellular response to type I interferon (ortholog); gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); Barrett's esophagus (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955427 19459936 19487276 + 102022624 AGCD01027373;AGCD01027374;GBDJ01321466;XM_005386618 XP_005386675 MODEL 8704246 protein-coding Siglec5 sialic acid binding Ig like lectin 5 ENCODES a protein that exhibits monosaccharide binding (ortholog); sialic acid binding (ortholog); INVOLVED IN regulation of endocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN lysosome (ortholog) NW_004955558 932981 945623 + 102005310 AGCD01073406;AGCD01073407;GBBH01003474;GBDF01009380;XM_013508882 XP_013364336 MODEL 8809432 pseudo LOC102018689 thymocyte nuclear protein 1 pseudogene NW_004955454 4953581 4954554 - 102018689 AGCD01045129 MODEL 8994409 protein-coding LOC102023042 chromosome unknown open reading frame, human C1orf74 ASSOCIATED WITH hepatocellular carcinoma (ortholog); thymoma (ortholog) NW_004955489 2439927 2462748 + 102023042 AGCD01059871;GBCE01163253;XM_005404534;XM_005404535;XM_005404536;XM_005404537 XP_005404591;XP_005404592;XP_005404593;XP_005404594 MODEL 8862922 ncrna LOC102004473 uncharacterized LOC102004473 NW_004955476 518058 533073 - 102004473 AGCD01055195;GBBH01074467;XR_001230791;XR_001230792;XR_263616 MODEL 39133115 snrna U6 U6 spliceosomal RNA 8806863 protein-coding LOC102019058 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7-like NW_004955415 31786275 31788023 + 102019058 AGCD01016697;XM_005381019;XM_013512238 XP_005381076;XP_013367692 MODEL 9057089 protein-coding Qsox2 quiescin sulfhydryl oxidase 2 INVOLVED IN female gonad development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog) NW_004955513 4438078 4463276 + 102013529 AGCD01066927;GBDK01241930;XM_005408519 XP_005408576 MODEL 8758910 protein-coding Lhx6 LIM homeobox 6 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell maturation (ortholog); cerebral cortex GABAergic interneuron migration (ortholog); cerebral cortex neuron differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955419 5835230 5858096 + 102010588 AGCD01019840;GBBH01224881;GBCE01185662;XM_005382538;XM_005382540;XM_013513079;XM_013513080;XM_013513081 XP_005382595;XP_005382597;XP_013368533;XP_013368534;XP_013368535 MODEL 8828800 protein-coding Gata5 GATA binding protein 5 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); cardiac jelly development (ortholog); cellular response to BMP stimulus (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); aortic valve disease (ortholog); ARTERIAL DISSECTION (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955528 1595231 1604979 + 102012999 AGCD01069566;GBDJ01420985;XM_005410057 XP_005410114 MODEL 8929971 pseudo LOC102009294 volume-regulated anion channel subunit LRRC8D-like NW_004955497 504156 510636 - 102009294 AGCD01062420;AGCD01062421 MODEL 9048590 protein-coding LOC102012872 olfactory receptor 1I1 NW_004955495 8171204 8172145 - 102012872 AGCD01062187;XM_005406096 XP_005406153 MODEL 8753307 protein-coding Dll4 delta like canonical Notch ligand 4 ENCODES a protein that exhibits Notch binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); aortic valve morphogenesis (ortholog); blood vessel lumenization (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 6 (ortholog) NW_004955416 7807049 7816346 + 102030417 AGCD01017013;GBCB01111083;XM_005381271 XP_005381328 MODEL 8911228 protein-coding Gjb2 gap junction protein beta 2 ENCODES a protein that exhibits calcium ion binding (ortholog); gap junction channel activity (ortholog); gap junction channel activity involved in cell communication by electrical coupling (ortholog); INVOLVED IN cell-cell signaling (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to glucagon stimulus (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN astrocyte projection (ortholog); cell body (ortholog); cell junction (ortholog) NW_004955497 987213 989477 - 102008747 AGCD01062443;GBCC01001206;XM_005406301 XP_005406358 MODEL 9005137 protein-coding S1pr4 sphingosine-1-phosphate receptor 4 INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); sphingosine-1-phosphate receptor signaling pathway (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrion (ortholog); presynapse (ortholog) NW_004955495 5243797 5247649 - 102026125 AGCD01061987;GBBH01024899;XM_005405851 XP_005405908 MODEL 8828174 protein-coding Slc19a1 solute carrier family 19 member 1 ENCODES a protein that exhibits 2',3'-cyclic GMP-AMP binding (ortholog); antiporter activity (ortholog); cyclic-GMP-AMP transmembrane transporter activity (ortholog); INVOLVED IN cyclic-GMP-AMP transmembrane import across plasma membrane (ortholog); female pregnancy (ortholog); folate import across plasma membrane (ortholog); PARTICIPATES IN folate cycle metabolic pathway; folate metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute lymphoblastic leukemia (ortholog); adenoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) NW_004955407 42132216 42154252 - 102013801 AGCD01007885;GBBH01088077;XM_005375919;XM_005375920;XM_013505554;XM_013505559;XM_013505567;XM_013505573;XM_013505575;XM_013505579;XM_013505583;XM_013505590;XM_013505595;XM_013505600;XM_013505606;XM_013505612;XM_013505619;XM_013505628;XM_013505630;XM_013505636;XM_013505639;XM_013505642 XP_005375976;XP_005375977;XP_013361008;XP_013361013;XP_013361021;XP_013361027;XP_013361029;XP_013361033;XP_013361037;XP_013361044;XP_013361049;XP_013361054;XP_013361060;XP_013361066;XP_013361073;XP_013361082;XP_013361084;XP_013361090;XP_013361093;XP_013361096 MODEL 8976061 protein-coding Lactb lactamase beta ENCODES a protein that exhibits identical protein binding (ortholog); peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); regulation of lipid metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); familial hypercholesterolemia (ortholog); FOUND IN mitochondrion (ortholog) NW_004955450 12140049 12155600 - 102010652 AGCD01042692;GBBH01149956;GBDF01125044;XM_013519043;XM_013519044 XP_013374497;XP_013374498 MODEL 8834993 ncrna LOC102025180 uncharacterized LOC102025180 NW_004955441 15926164 15928611 + 102025180 AGCD01037262;GBDF01043836;XR_262089;XR_262090 MODEL 10289150 ncrna LOC106147296 uncharacterized LOC106147296 NW_004955540 1742330 1744155 + 106147296 AGCD01071308;GBCE01067179;XR_001232127 MODEL 730469318 misc_rna TUG1_1 Taurine upregulated 1 conserved region 1 39132412 snrna U6 U6 spliceosomal RNA 8770763 protein-coding Tbx3 T-box transcription factor 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior/posterior axis specification, embryo (ortholog); atrioventricular bundle cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); colon adenocarcinoma (ortholog); FOUND IN cilium (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955455 15988153 16000156 + 102027147 AGCD01046127;AGCD01046128;GBBH01036539;GBDJ01004314;XM_013520475 XP_013375929 MODEL 8864746 protein-coding LOC102007770 olfactory receptor 2T27-like NW_004955418 29729166 29730179 + 102007770 AGCD01019481;XM_005382359 XP_005382416 MODEL 39132739 snrna U6 U6 spliceosomal RNA 39133605 snrna U4 U4 spliceosomal RNA 8767787 protein-coding LOC102015945 E3 ubiquitin-protein ligase TRIM68 NW_004955414 20201525 20210506 - 102015945 AGCD01015362;GBDF01254273;XM_005380050 XP_005380107 MODEL 8799950 protein-coding Fgfbp1 fibroblast growth factor binding protein 1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955480 8088670 8091882 + 102015009 AGCD01056715;AY462142;GBBH01115136;XM_005402520 AAR26541;XP_005402577 MODEL 39132872 snrna U6 U6 spliceosomal RNA 8811939 protein-coding Dus2 dihydrouridine synthase 2 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); FMN binding (ortholog); NADPH binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); tRNA dihydrouridine synthesis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955484 8564015 8609987 - 102011008 AGCD01058393;GBDJ01422933;XM_005403588;XM_013503874;XM_013503875;XM_013503876;XM_013503877;XM_013503878 XP_005403645;XP_013359328;XP_013359329;XP_013359330;XP_013359331;XP_013359332 MODEL 8760097 protein-coding Bmerb1 bMERB domain containing 1 INVOLVED IN negative regulation of cell motility involved in cerebral cortex radial glia guided migration (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Familial Thoracic Aortic Aneurysm 4 (ortholog); FOUND IN microtubule cytoskeleton (ortholog) NW_004955442 317334 442514 + 102022429 AGCD01037419;AGCD01037420;AGCD01037421;AGCD01037422;AGCD01037423;AGCD01037424;AGCD01037425;GBDF01078842;XM_005391062;XM_005391063 XP_005391119;XP_005391120 MODEL 8823122 protein-coding Tnfrsf9 TNF receptor superfamily member 9 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN regulation of cell population proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); celiac disease (ortholog); Colonic Neoplasms (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955486 4986245 5009437 + 102004168 AGCD01059074;GBDF01144267;XM_005404066;XM_013504319;XM_013504320;XM_013504321 XP_005404123;XP_013359773;XP_013359774;XP_013359775 MODEL 8707374 protein-coding Gss glutathione synthetase ENCODES a protein that exhibits ATP binding (ortholog); glutathione binding (ortholog); glutathione synthase activity (ortholog); INVOLVED IN glutathione biosynthetic process (ortholog); response to amino acid (ortholog); response to cadmium ion (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; glutathione metabolic pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Alzheimer's disease (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955422 26427581 26483380 + 102017250 AGCD01023288;GBCQ01006900;XM_005384810;XM_013514053;XM_013514054 XP_005384867;XP_013369507;XP_013369508 MODEL 9039203 ncrna LOC102020173 uncharacterized LOC102020173 NW_004955448 665787 671113 + 102020173 AGCD01041236;GBDF01074704;XR_262451 MODEL 8818950 protein-coding CUNH8orf33 chromosome unknown C8orf33 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955454 3515898 3518046 + 102021306 AGCD01045086;GBDF01249616;XM_005395940;XM_005395941 XP_005395997;XP_005395998 MODEL 8924426 ncrna LOC102003404 uncharacterized LOC102003404 NW_004955404 18428351 18441554 + 102003404 AGCD01003616;GBDF01251601;XR_259317 MODEL 8869929 protein-coding Sun2 Sad1 and UNC84 domain containing 2 ENCODES a protein that exhibits cytoskeleton-nuclear membrane anchor activity (ortholog); identical protein binding (ortholog); lamin binding (ortholog); INVOLVED IN centrosome localization (ortholog); nuclear matrix anchoring at nuclear membrane (ortholog); nuclear migration along microfilament (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Emery-Dreifuss muscular dystrophy (ortholog); lung cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); condensed nuclear chromosome (ortholog); endosome membrane (ortholog) NW_004955413 24851626 24868352 - 102023794 AGCD01014383;AGCD01014384;GBBH01060121;GBCB01007277;XM_005379273 XP_005379330 MODEL 730469546 scarna SCARNA23 Small Cajal body specific RNA 23 8995857 protein-coding Evi2a ecotropic viral integration site 2A FOUND IN plasma membrane (ortholog) NW_004955481 6346024 6350216 - 102016709 AGCD01057024;GBDF01307664;XM_005402795;XM_013503425 XP_005402852;XP_013358879 MODEL 8848229 protein-coding Siglecl1 SIGLEC family like 1 ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955558 1101532 1116578 - 102014502 AGCD01073415;AGCD01073416;GBDF01190924;GBDF01190934;XM_013508840 XP_013364294 MODEL 8782854 ncrna LOC102014043 uncharacterized LOC102014043 NW_004955416 14532238 14541580 + 102014043 AGCD01017276;GBDK01284550;XR_260383 MODEL 8966399 ncrna LOC102005183 uncharacterized LOC102005183 NW_004955439 1843897 1881335 + 102005183 AGCD01035628;GBDF01100877;XR_001235170;XR_001235171;XR_261965;XR_261966 MODEL 8868211 protein-coding LOC102023047 chromosome unknown open reading frame, human C11orf68 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); melanoma (ortholog) NW_004955422 19409368 19410742 + 102023047 AGCD01023006;GBDF01003352;GBDJ01088971;XM_013514329 XP_013369783 MODEL 39133116 snrna U6 U6 spliceosomal RNA 9003734 ncrna LOC102003731 uncharacterized LOC102003731 NW_004955407 34830164 34933219 - 102003731 AGCD01007727;AGCD01007728;GBDF01191929;XR_259609 MODEL 8798402 protein-coding Il15 interleukin 15 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN cell maturation (ortholog); cellular response to vitamin D (ortholog); extrathymic T cell selection (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); arteriosclerosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955471 1496352 1583919 - 102011302 AGCD01052985;GBDJ01349954;XM_005400859;XM_005400860;XM_013522919 XP_005400916;XP_005400917;XP_013378373 MODEL 8883817 ncrna LOC102009295 uncharacterized LOC102009295 NW_004955424 20161293 20182303 - 102009295 AGCD01024845;GBDF01236664;XR_261089 MODEL 8721741 pseudo LOC102007773 BAG family molecular chaperone regulator 5-like NW_004955484 8703188 8705376 + 102007773 AGCD01058394 MODEL 8804190 pseudo LOC102012875 uncharacterized LOC102012875 NW_004955497 3366221 3391937 + 102012875 AGCD01062536;AGCD01062537;AGCD01062538;AGCD01062539 MODEL 8814014 protein-coding Smim2 small integral membrane protein 2 ASSOCIATED WITH esophageal cancer (ortholog) NW_004955518 2093272 2093669 - 102027562 AGCD01067771;GBBH01127479;XM_013506951 XP_013362405 MODEL 9023850 protein-coding Tslig3a tRNA splicing ligase complex subunit 3A ENCODES a protein that exhibits protein methyltransferase activity (ortholog); INVOLVED IN lysosome localization (ortholog); positive regulation of ruffle assembly (ortholog); ASSOCIATED WITH high grade glioma (ortholog); lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955441 1799453 1814096 - 102027117 AGCD01036757;AGCD01036758;GBDJ01045504;XM_005390857 XP_005390914 MODEL 9053164 protein-coding Lrrc57 leucine rich repeat containing 57 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955416 9230362 9237799 - 102024005 AGCD01017080;AGCD01017081;GBDK01124064;XM_005381347;XM_005381348;XM_005381349 XP_005381404;XP_005381405;XP_005381406 MODEL 8744411 pseudo LOC102017875 high mobility group protein B1 pseudogene NW_004955418 4498538 4499208 + 102017875 AGCD01018825 MODEL 8913661 protein-coding LOC102022008 histone H3.3-like NW_004955435 12425986 12426994 + 102022008 AGCD01033147;GBDK01387908;XM_005388840 XP_005388897 MODEL 8986967 ncrna LOC102012502 uncharacterized LOC102012502 NW_004955456 10052149 10054952 + 102012502 AGCD01046517;GBDF01261841;XR_262892 MODEL 8833726 ncrna LOC102010449 uncharacterized LOC102010449 NW_004955408 9399013 9409596 + 102010449 AGCD01008249;GBDF01235295;XR_259676 MODEL 9026018 protein-coding Taf1b TATA-box binding protein associated factor, RNA polymerase I subunit B ENCODES a protein that exhibits RNA polymerase I core promoter sequence-specific DNA binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); RNA polymerase I preinitiation complex assembly (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nucleolus (ortholog); RNA polymerase I core factor complex (ortholog); RNA polymerase transcription factor SL1 complex (ortholog) NW_004955487 5359132 5394564 + 102025691 AGCD01059330;GBDF01081287;XM_005404399 XP_005404456 MODEL 8762303 pseudo LOC102018690 voltage-dependent anion-selective channel protein 1 pseudogene NW_004955407 3264485 3268366 + 102018690 AGCD01006856;XR_259547 MODEL 8972957 protein-coding S1pr5 sphingosine-1-phosphate receptor 5 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN regulation of neuron differentiation (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); Experimental Diabetes Mellitus (ortholog); systemic scleroderma (ortholog); FOUND IN presynapse (ortholog) NW_004955495 1717549 1722257 - 102007029 AGCD01061714;AGCD01061715;AGCD01061716;GBDI01108035;XM_013505132 XP_013360586 MODEL 8746900 protein-coding Gstcd glutathione S-transferase C-terminal domain containing INVOLVED IN chronic inflammatory response (ortholog); respiratory system development (ortholog); response to lipopolysaccharide (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955496 3447400 3564540 - 102009076 AGCD01062292;AGCD01062293;AGCD01062294;AGCD01062295;AGCD01062296;GBDF01277377;XM_005406222;XM_005406223 XP_005406279;XP_005406280 MODEL 730469589 misc_rna TUG1_2 Taurine upregulated 1 conserved region 2 8936237 protein-coding Tex36 testis expressed 36 NW_004955477 3562667 3579915 - 102007762 AGCD01055556;AGCD01055557;GBDF01083461;XM_005401991 XP_005402048 MODEL 9001818 protein-coding LOC102019060 intercellular adhesion molecule 5-like NW_004955478 7958977 7970345 - 102019060 AGCD01056003;GBDK01346127;XM_005402181;XM_005402182;XM_013503152;XM_013503154;XM_013503155;XM_013503156 XP_005402238;XP_005402239;XP_013358606;XP_013358608;XP_013358609;XP_013358610 MODEL 8979085 protein-coding LOC102004474 protocadherin beta-2-like NW_004955415 12721832 12776585 - 102004474 AGCD01016225;AGCD01016226;AGCD01016227;AGCD01016228;AGCD01016229;AGCD01016230;AGCD01016231;GBDF01153219;GBDK01431475;XM_013512255 XP_013367709 MODEL 8791260 protein-coding Qtman queuosine-tRNA mannosyltransferase ENCODES a protein that exhibits tRNA-queuosine(34) beta-mannosyltransferase activity (ortholog); INVOLVED IN regulation of translation (ortholog); tRNA modification (ortholog); tRNA wobble guanine modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955440 10334584 10702436 - 102017605 AGCD01036390;AGCD01036391;AGCD01036392;AGCD01036393;AGCD01036394;AGCD01036395;AGCD01036396;AGCD01036397;GBCB01025133;XM_005390782;XM_005390783;XM_005390784;XM_005390785;XM_005390786;XM_005390787;XM_013517453;XM_013517454;XM_013517455;XM_013517456 XP_005390839;XP_005390840;XP_005390841;XP_005390842;XP_005390843;XP_005390844;XP_013372907;XP_013372908;XP_013372909;XP_013372910 MODEL 9042916 protein-coding Slc6a18 solute carrier family 6 member 18 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); neutral L-amino acid transmembrane transporter activity (ortholog); neutral L-amino acid:sodium:chloride symporter activity (ortholog); INVOLVED IN amino acid transmembrane transport (ortholog); amino acid transport (ortholog); hyperosmotic response (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hypertension (ortholog); melanoma (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) NW_004955504 634615 644667 + 102004836 AGCD01064824;GBCQ01008396;XM_005407047;XM_013505899;XM_013505900;XM_013505901;XM_013505902;XM_013505903;XM_013505904;XM_013505905;XM_013505907 XP_005407104;XP_013361353;XP_013361354;XP_013361355;XP_013361356;XP_013361357;XP_013361358;XP_013361359;XP_013361361 MODEL 8832697 protein-coding Lhx8 LIM homeobox 8 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN female gonad development (ortholog); forebrain neuron development (ortholog); forebrain neuron differentiation (ortholog); ASSOCIATED WITH Binge Drinking (ortholog); lung cancer (ortholog); sarcoma (ortholog); FOUND IN female germ cell nucleus (ortholog) NW_004955423 17644691 17668969 - 102026542 AGCD01023858;AGCD01023859;GBBH01120861;XM_013514370 XP_013369824 MODEL 8982825 protein-coding Gatad1 GATA zinc finger domain containing 1 INVOLVED IN chromatin remodeling (ortholog); ASSOCIATED WITH dilated cardiomyopathy 2B (ortholog); Heimler syndrome 1 (ortholog); infantile Refsum disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955432 9389020 9398791 + 102003477 AGCD01030905;GBCQ01006270;GBDF01053561;XM_013515936 XP_013371390 MODEL 8865387 protein-coding Kdm6a lysine demethylase 6A ENCODES a protein that exhibits chromatin DNA binding (ortholog); histone H3K27me2/H3K27me3 demethylase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to endothelin (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN histone modification pathway; renal cell carcinoma pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN histone methyltransferase complex (ortholog); MLL3/4 complex (ortholog); nucleus (ortholog) NW_004955516 3151350 3346832 - 102029654 AGCD01067484;AGCD01067485;AGCD01067486;AGCD01067487;AGCD01067488;AGCD01067489;GBDJ01083590;XM_005408986;XM_005408987;XM_005408989;XM_005408990;XM_005408992 XP_005409043;XP_005409044;XP_005409046;XP_005409047;XP_005409049 MODEL 8893980 protein-coding Wwtr1 WW domain containing transcription regulator 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN cilium assembly (ortholog); glomerulus development (ortholog); heart process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alveolar rhabdomyosarcoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955448 745419 868313 - 102020732 AGCD01041237;AGCD01041238;GBCB01003406;GBDJ01135085;XM_005393000 XP_005393057 MODEL 8841477 protein-coding Gjb3 gap junction protein beta 3 INVOLVED IN cellular response to retinoic acid (ortholog); in utero embryonic development (ortholog); placenta development (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 2B (ortholog); autosomal recessive nonsyndromic deafness 1A (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN cell junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) NW_004955452 12892687 12896290 + 102013046 AGCD01044370;GBCE01170050;XM_005395124 XP_005395181 MODEL 8881903 protein-coding Nr1i3 nuclear receptor subfamily 1 group I member 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); nuclear receptor activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); osteoblast differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955468 12985105 13002850 - 102007983 AGCD01052194;AGCD01052195;AGCD01052196;GBCQ01031570;XM_005400271 XP_005400328 MODEL 8841114 protein-coding Dus3l dihydrouridine synthase 3 like ENCODES a protein that exhibits mRNA dihydrouridine synthase activity (ortholog); tRNA-dihydrouridine47 synthase activity (ortholog); INVOLVED IN regulation of translation (ortholog); tRNA dihydrouridine synthesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955495 3653613 3660331 + 102022937 AGCD01061874;GBBH01166430;XM_005405754;XM_005405755;XM_005405756;XM_005405757;XM_005405758;XM_013505195 XP_005405811;XP_005405812;XP_005405813;XP_005405814;XP_005405815;XP_013360649 MODEL 8730448 pseudo LOC102025184 vacuolar protein sorting-associated protein 45 pseudogene NW_004955443 208496 220334 + 102025184 AGCD01038092;AGCD01038093;AGCD01038094 MODEL 9039159 protein-coding LOC102017879 A-kinase anchor protein 2 NW_004955419 16940266 17406309 - 102017879 AGCD01020138;AGCD01020139;AGCD01020140;AGCD01020141;AGCD01020142;AGCD01020143;AGCD01020144;AGCD01020145;AGCD01020146;AGCD01020147;AGCD01020148;AGCD01020149;AGCD01020150;AGCD01020151;GBDI01328539;GBDK01021121;XM_005382747 XP_005382804 MODEL 8821926 protein-coding Slc19a2 solute carrier family 19 member 2 ENCODES a protein that exhibits thiamine transmembrane transporter activity (ortholog); INVOLVED IN pyridoxine transport (ortholog); spermatogenesis (ortholog); thiamine diphosphate biosynthetic process (ortholog); PARTICIPATES IN thiamine metabolic pathway; ASSOCIATED WITH angle-closure glaucoma (ortholog); cataract (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955462 7786920 7804828 + 102012933 AGCD01049309;GBDF01308169;XM_005398189 XP_005398246 MODEL 39132413 snrna U6 U6 spliceosomal RNA 9031717 protein-coding Sun3 Sad1 and UNC84 domain containing 3 ASSOCIATED WITH colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN meiotic nuclear membrane microtubule tethering complex (ortholog); nuclear envelope (ortholog) NW_004955456 5423920 5445741 + 102006743 AGCD01046327;AGCD01046328;GBDF01008593;GBDF01008595;XM_013520563 XP_013376017 MODEL 10301991 ncrna LOC106147297 uncharacterized LOC106147297 NW_004955540 1825897 1855517 - 106147297 AGCD01071308;GBCE01040447;XR_001232128;XR_001232129;XR_001232130 MODEL 39132740 snrna U6 U6 spliceosomal RNA 8865229 protein-coding Sigmar1 sigma non-opioid intracellular receptor 1 ENCODES a protein that exhibits G protein-coupled opioid receptor activity (ortholog); identical protein binding (ortholog); mu-type opioid receptor binding (ortholog); INVOLVED IN conditioned place preference (ortholog); cyclooxygenase pathway (ortholog); negative regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); amnestic disorder (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955472 1493896 1496377 + 102021872 AGCD01053395;GBDI01070822;XM_005401048 XP_005401105 MODEL 39133606 snrna U4 U4 spliceosomal RNA 39133117 snrna U6 U6 spliceosomal RNA 8848332 pseudo LOC102015946 high mobility group protein B1 pseudogene NW_004955414 23934137 23936821 + 102015946 AGCD01015531 MODEL 8895475 protein-coding Dlst dihydrolipoamide S-succinyltransferase ENCODES a protein that exhibits acyltransferase activity (ortholog); dihydrolipoyllysine-residue glutaryltransferase activity (ortholog); dihydrolipoyllysine-residue succinyltransferase activity (ortholog); INVOLVED IN 2-oxoglutarate decarboxylation to succinyl-CoA (ortholog); 2-oxoglutarate metabolic process (ortholog); succinyl-CoA metabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; citric acid cycle pathway; fumaric aciduria pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955523 660413 680878 - 102011235 AGCD01068474;AGCD01068475;GBBH01064906;GBDJ01128538;XM_013507173 XP_013362627 MODEL 39132876 snrna U6 U6 spliceosomal RNA 8884637 protein-coding Il15ra interleukin 15 receptor subunit alpha ENCODES a protein that exhibits interleukin-15 receptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); interleukin-15-mediated signaling pathway (ortholog); negative regulation of neuron projection development (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); interleukin-15 receptor complex (ortholog) NW_004955421 22590168 22612835 - 102009192 AGCD01022140;AGCD01022141;GBDJ01025096;XM_013513670;XM_013513671;XM_013513672 XP_013369124;XP_013369125;XP_013369126 MODEL 8760138 protein-coding Fgfr1 fibroblast growth factor receptor 1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); auditory receptor cell development (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN ceric oxide nanoparticle response pathway; fibroblast growth factor signaling pathway; glypican signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acrocephalosyndactylia (ortholog); acute myeloid leukemia (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955463 14013247 14064354 - 102024657 AGCD01049897;AGCD01049898;AGCD01049899;GBDJ01132958;XM_005398449;XM_013521506;XM_013521508;XM_013521509;XM_013521510;XM_013521511;XM_013521512 XP_005398506;XP_013376960;XP_013376962;XP_013376963;XP_013376964;XP_013376965;XP_013376966 MODEL 9065422 protein-coding Lhx9 LIM homeobox 9 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell population proliferation (ortholog); female gonad development (ortholog); gonad morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog) NW_004955406 34341972 34363351 + 102026828 AGCD01006501;GBDJ01206517;XM_005375125;XM_005375126;XM_005375128;XM_005375129;XM_005375131;XM_013521911;XM_013521921;XM_013521925 XP_005375182;XP_005375183;XP_005375185;XP_005375186;XP_005375188;XP_013377365;XP_013377375;XP_013377379 MODEL 8897190 protein-coding Gatad2a GATA zinc finger domain containing 2A ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN anterior neuropore closure (ortholog); blood vessel development (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN chromosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955524 2439594 2506539 - 102012356 AGCD01068818;GBCE01076477;XM_005409631;XM_005409632;XM_005409634;XM_005409636;XM_013507292;XM_013507293;XM_013507294;XM_013507295 XP_005409688;XP_005409689;XP_005409691;XP_005409693;XP_013362746;XP_013362747;XP_013362748;XP_013362749 MODEL 8730064 protein-coding Kdm6b lysine demethylase 6B ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin binding (ortholog); histone H3 methyltransferase activity (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cell fate commitment (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autistic disorder (ortholog); breast carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955467 9085239 9106658 - 102004587 AGCD01051483;AGCD01051484;GBCE01170346;XM_005399460;XM_005399461;XM_013522060;XM_013522061;XM_013522062;XM_013522063;XM_013522064 XP_005399517;XP_005399518;XP_013377514;XP_013377515;XP_013377516;XP_013377517;XP_013377518 MODEL 9064842 ncrna LOC102022010 uncharacterized LOC102022010 NW_004955437 1401348 1411809 + 102022010 AGCD01034205;GBDF01291022;XR_001235001;XR_001235002;XR_001235003 MODEL 730469298 scarna SCARNA24 Small Cajal body specific RNA 24 8776998 protein-coding Tbx4 T-box transcription factor 4 INVOLVED IN angiogenesis (ortholog); embryonic hindlimb morphogenesis (ortholog); embryonic limb morphogenesis (ortholog); ASSOCIATED WITH Amelia, Autosomal Recessive (ortholog); APLASIA/HYPOPLASIA INVOLVING BONES OF THE LOWER LIMBS (ortholog); arthropathy (ortholog) NW_004955451 2491525 2532948 + 102009789 AGCD01043012;AGCD01043013;AGCD01043014;GBDF01152219;XM_005393969;XM_013519055 XP_005394026;XP_013374509 MODEL 8871473 protein-coding Taf1c TATA-box binding protein associated factor, RNA polymerase I subunit C ENCODES a protein that exhibits RNA polymerase I core promoter sequence-specific DNA binding (ortholog); RNA polymerase I general transcription initiation factor activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); autistic disorder (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955564 121988 132347 + 102019118 AGCD01074187;GBDF01193645;XM_005413220;XM_005413222;XM_005413223;XM_013509199;XM_013509201;XM_013509202 XP_005413277;XP_005413279;XP_005413280;XP_013364653;XP_013364655;XP_013364656 MODEL 8866355 pseudo LOC102009680 60S ribosomal protein L13a pseudogene NW_004955452 571667 572274 - 102009680 AGCD01043817;AGCD01043818 MODEL 9030957 pseudo LOC102004476 uncharacterized LOC102004476 NW_004955476 7152638 7163867 + 102004476 AGCD01055347 MODEL 8741740 protein-coding LOC102019064 40S ribosomal protein S4, X isoform-like NW_004955484 2005024 2008857 + 102019064 AGCD01058077;GBDF01007579;XM_005403440 XP_005403497 MODEL 8792406 pseudo LOC102009303 39S ribosomal protein L28, mitochondrial pseudogene NW_004955428 16029765 16030480 - 102009303 AGCD01028014 MODEL 8897015 protein-coding LOC102003733 E3 ubiquitin-protein ligase TRIM50 NW_004955456 14320894 14328341 + 102003733 AGCD01046639;GBDF01267146;XM_005396793;XM_005396795;XM_013520599 XP_005396850;XP_005396852;XP_013376053 MODEL 9046039 protein-coding Bmf Bcl2 modifying factor INVOLVED IN anoikis (ortholog); negative regulation of apoptotic signaling pathway (ortholog); negative regulation of autophagy (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN acrosomal vesicle (ortholog); actin cytoskeleton (ortholog); cytoplasm (ortholog) NW_004955416 7048654 7068917 - 102014243 AGCD01016961;GBBH01186132;XM_005381214;XM_005381215 XP_005381271;XP_005381272 MODEL 8830376 protein-coding Tnfsf10 TNF superfamily member 10 ENCODES a protein that exhibits cytokine activity (ortholog); identical protein binding (ortholog); TRAIL binding (ortholog); INVOLVED IN male gonad development (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN Trail mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriosclerosis (ortholog); Brain Injuries (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955420 2550392 2566448 - 102029748 AGCD01020602;GBBH01065699;XM_005383009 XP_005383066 MODEL 8968138 protein-coding Tslig3b tRNA splicing ligase complex subunit 3B ENCODES a protein that exhibits identical protein binding (ortholog); protein methyltransferase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955416 5457232 5486744 + 102008845 AGCD01016912;AGCD01016913;GBBH01025779;GBDF01193034;XM_013512677 XP_013368131 MODEL 8960805 protein-coding Smim20 small integral membrane protein 20 INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN extracellular region (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955443 19242776 19254002 - 102018661 AGCD01038622;GBDJ01132507;XM_005392031 XP_005392088 MODEL 8853520 pseudo LOC102012508 ADP-ribosylation factor-like protein 2-binding protein pseudogene NW_004955459 6804477 6804982 + 102012508 AGCD01048085;XR_263017 MODEL 8863730 protein-coding Xab2 XPA binding protein 2 INVOLVED IN blastocyst development (ortholog); cerebral cortex development (ortholog); DNA-templated transcription (ortholog); PARTICIPATES IN nucleotide excision repair pathway; spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955563 1630403 1638333 + 102030358 AGCD01074153;GBDF01051839;XM_005413180 XP_005413237 MODEL 8867245 protein-coding Gjb4 gap junction protein beta 4 ENCODES a protein that exhibits gap junction channel activity (ortholog); INVOLVED IN cell-cell signaling (ortholog); gap junction-mediated intercellular transport (ortholog); olfactory behavior (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 3A (ortholog); epidermolytic hyperkeratosis (ortholog); erythrokeratodermia variabilis (ortholog); FOUND IN cell junction (ortholog); connexin complex (ortholog); plasma membrane (ortholog) NW_004955452 12871548 12874019 + 102012397 AGCD01044369;GBCE01005791;XM_013519685 XP_013375139 MODEL 8892715 protein-coding Dus4l dihydrouridine synthase 4 like INVOLVED IN tRNA dihydrouridine synthesis (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIi (ortholog) NW_004955410 11919710 11931593 + 102030159 AGCD01010837;GBDF01252851;XM_005377271;XM_005377272;XM_005377273;XM_005377274;XM_005377275;XM_005377276;XM_005377277;XM_005377278 XP_005377328;XP_005377329;XP_005377330;XP_005377331;XP_005377332;XP_005377333;XP_005377334;XP_005377335 MODEL 39131478 protein-coding S1PR5 sphingosine-1-phosphate receptor 5 8985675 protein-coding LOC102017882 nuclear receptor subfamily 1 group I member 3-like NW_004955489 1878193 1883606 - 102017882 AGCD01059853;GBCQ01063310;XM_005404517;XM_005404518;XM_005404519 XP_005404574;XP_005404575;XP_005404576 MODEL 9009932 protein-coding Gatad2b GATA zinc finger domain containing 2B INVOLVED IN chromatin remodeling (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Anisocoria (ortholog); atrial heart septal defect (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); nuclear speck (ortholog) NW_004955545 424997 519031 - 102021177 AGCD01071793;AGCD01071794;AGCD01071795;AGCD01071796;AGCD01071797;AGCD01071798;GBDI01293510;XM_005411445;XM_005411446;XM_005411447;XM_005411448;XM_013508226;XM_013508227 XP_005411502;XP_005411503;XP_005411504;XP_005411505;XP_013363680;XP_013363681 MODEL 8947781 protein-coding LOC102023050 zinc finger protein 709-like NW_004955494 8410747 8423126 - 102023050 AGCD01061584;GBDF01210638;XM_005405519;XM_005405520 XP_005405576;XP_005405577 MODEL 39132415 snrna U6 U6 spliceosomal RNA 39132741 snrna U6 U6 spliceosomal RNA 8977515 pseudo LOC102007778 WW domain-containing adapter protein with coiled-coil pseudogene NW_004955488 8069378 8071802 - 102007778 AGCD01059700 MODEL 9006315 pseudo LOC102012878 mitochondrial import inner membrane translocase subunit TIM14 pseudogene NW_004955426 25828943 25829298 - 102012878 AGCD01026728 MODEL 8725341 protein-coding Qtrt1 queuine tRNA-ribosyltransferase catalytic subunit 1 ENCODES a protein that exhibits tRNA-guanosine(34) queuine transglycosylase activity (ortholog); INVOLVED IN tRNA wobble guanine modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of mitochondrial outer membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955495 1851861 1857599 + 102008955 AGCD01061735;AGCD01061736;GBCE01028382;XM_005405610 XP_005405667 MODEL 8878988 protein-coding Lrrc58 leucine rich repeat containing 58 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); regulation of taurine biosynthetic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog) NW_004955427 19896034 19911233 - 102022947 AGCD01027388;GBBH01024743;XM_005386619 XP_005386676 MODEL 8887156 protein-coding LOC102014046 cytochrome c oxidase subunit 6C ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955417 15230562 15241610 - 102014046 AGCD01018224;AGCD01018225;GBDK01016142;XM_005381859 XP_005381916 MODEL 8884979 protein-coding LOC102020175 olfactory receptor 14I1-like NW_004955581 896179 896982 - 102020175 AGCD01075702;XM_013509732 XP_013365186 MODEL 8783306 ncrna LOC102003405 uncharacterized LOC102003405 NW_004955452 4390516 4398593 - 102003405 AGCD01043981;GBDK01434065;XR_262649 MODEL 8847508 pseudo LOC102018692 coiled-coil domain-containing protein 152-like NW_004955457 9051097 9052057 + 102018692 AGCD01046927 MODEL 8896312 ncrna LOC102005186 uncharacterized LOC102005186 NW_004955553 939259 940745 - 102005186 AGCD01072866;GBDF01291522;XR_264933 MODEL 9010852 protein-coding Fgfr1op2 FGFR1 oncogene partner 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN wound healing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955413 21814133 21843105 + 102006561 AGCD01014267;AGCD01014268;GBDF01126930;XM_005379112;XM_005379113;XM_005379114;XM_005379115 XP_005379169;XP_005379170;XP_005379171;XP_005379172 MODEL 730469106 misc_rna TUG1_3 Taurine upregulated 1 conserved region 3 8874366 protein-coding Nr2c1 nuclear receptor subfamily 2 group C member 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of retinoic acid receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); PML body (ortholog) NW_004955405 31637832 31693621 - 102003831 AGCD01005301;AGCD01005302;GBCB01088046;XM_005374480;XM_005374482 XP_005374537;XP_005374539 MODEL 8710200 protein-coding LOC102025187 zinc finger protein 709-like NW_004955569 27899 63427 + 102025187 AGCD01074557;AGCD01074558;GBCE01006195;XM_005413488 XP_005413545 MODEL 39133381 scarna SCARNA3 Small Cajal body specific RNA 3 8798281 protein-coding Slc19a3 solute carrier family 19 member 3 ENCODES a protein that exhibits thiamine transmembrane transporter activity (ortholog); INVOLVED IN pyridoxine transport (ortholog); thiamine diphosphate biosynthetic process (ortholog); thiamine transmembrane transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); basal ganglia disease (ortholog); biotin-responsive basal ganglia disease (ortholog); FOUND IN plasma membrane (ortholog) NW_004955453 6935372 6957808 + 102007731 AGCD01044734;GBDF01196023;XM_005395442;XM_013519971;XM_013519972;XM_013519973;XM_013519974;XM_013519975;XM_013519976;XM_013519977;XM_013519978 XP_005395499;XP_013375425;XP_013375426;XP_013375427;XP_013375428;XP_013375429;XP_013375430;XP_013375431;XP_013375432 MODEL 8733744 protein-coding Tex38 testis expressed 38 ASSOCIATED WITH sarcoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955464 11658324 11659710 - 102014121 AGCD01050160;GBDF01010837;XM_005398656 XP_005398713 MODEL 8886996 protein-coding Sun5 Sad1 and UNC84 domain containing 5 INVOLVED IN protein-containing complex assembly (ortholog); regulation of protein localization (ortholog); spermatid development (ortholog); ASSOCIATED WITH sarcoma (ortholog); spermatogenic failure 16 (ortholog); stomach cancer (ortholog); FOUND IN Golgi apparatus (ortholog); nuclear inner membrane (ortholog); sperm head-tail coupling apparatus (ortholog) NW_004955422 28252245 28273457 + 102005390 AGCD01023345;GBDF01008683;XM_005384857 XP_005384914 MODEL 9027470 protein-coding LOC102017883 zinc finger protein 75D NW_004955489 9388240 9400320 + 102017883 AGCD01060038;AGCD01060039;GBCE01139029;XM_005404607;XM_013504455 XP_005404664;XP_013359909 MODEL 8942159 protein-coding CUNH8orf34 chromosome unknown C8orf34 homolog ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955444 10700697 11071804 - 102006622 AGCD01039024;AGCD01039025;AGCD01039026;AGCD01039027;AGCD01039028;AGCD01039029;AGCD01039030;AGCD01039031;AGCD01039032;AGCD01039033;GBBH01229672;GBDI01263306;XM_013518171;XM_013518172;XM_013518173 XP_013373625;XP_013373626;XP_013373627 MODEL 10374592 protein-coding LOC106147298 circumsporozoite protein-like NW_004955540 2052297 2053589 - 106147298 AGCD01071310;GBDJ01383943;XM_013507923 XP_013363377 MODEL 8762389 protein-coding LOC102022011 IQ domain-containing protein F5 NW_004955532 3547528 3549402 - 102022011 AGCD01070286;GBDK01320263;XM_005410329 XP_005410386 MODEL 8848705 protein-coding Lactb2 lactamase beta 2 ENCODES a protein that exhibits RNA endonuclease activity (ortholog); single-stranded RNA binding (ortholog); zinc ion binding (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); mitochondrial matrix (ortholog) NW_004955444 9059999 9088705 + 102029910 AGCD01038956;AGCD01038957;AGCD01038958;GBDK01276467;XM_005392104 XP_005392161 MODEL 8873518 pseudo LOC102004478 beta-galactosidase-like NW_004955416 3761907 3786720 + 102004478 AGCD01016876 MODEL 9033228 protein-coding Evi2b ecotropic viral integration site 2B INVOLVED IN positive regulation of granulocyte differentiation (ortholog) NW_004955481 6332220 6342374 - 102017236 AGCD01057024;GBDK01241136;XM_005402796 XP_005402853 MODEL 8815291 protein-coding Il16 interleukin 16 ENCODES a protein that exhibits CD4 receptor binding (ortholog); cytokine activity (ortholog); INVOLVED IN induction of positive chemotaxis (ortholog); leukocyte chemotaxis (ortholog); positive regulation of inflammatory response (ortholog); ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); borna disease (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog) NW_004955416 11876317 11987548 + 102023029 AGCD01017193;AGCD01017194;AGCD01017195;AGCD01017196;GBDI01361041;XM_005381442;XM_005381443;XM_005381444;XM_005381449 XP_005381499;XP_005381500;XP_005381501;XP_005381506 MODEL 8925626 protein-coding Tslig3c tRNA splicing ligase complex subunit 3C ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955468 1021711 1025566 - 102014227 AGCD01051748;GBCE01154383;XM_005399847 XP_005399904 MODEL 8868043 protein-coding Bmi1 BMI1 proto-oncogene, polycomb ring finger ENCODES a protein that exhibits chromatin binding (ortholog); promoter-specific chromatin binding (ortholog); RING-like zinc finger domain binding (ortholog); INVOLVED IN brain development (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute pancreatitis (ortholog); chronic pancreatitis (ortholog); FOUND IN cytoplasm (ortholog); heterochromatin (ortholog); nuclear body (ortholog) NW_004955429 6548586 6553730 - 102017361 AGCD01028551;GBDK01001879;GBDK01001881;XM_013515495 XP_013370949 MODEL 8720449 pseudo LOC102012517 60S ribosomal protein L38 pseudogene NW_004955412 19711838 19712048 + 102012517 AGCD01012971 MODEL 8910844 protein-coding Kdm7a lysine demethylase 7A ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); histone H3K27me2/H3K27me3 demethylase activity (ortholog); histone H3K36 demethylase activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH melanoma (ortholog) NW_004955494 3018395 3110528 + 102023162 AGCD01061463;AGCD01061464;AGCD01061465;AGCD01061466;GBDI01289995;XM_013504921 XP_013360375 MODEL 8775991 protein-coding Gstk1 glutathione S-transferase kappa 1 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); glutathione transferase activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); glutathione metabolic process (ortholog); liver development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); colon adenocarcinoma (ortholog); Dwarfism (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); peroxisome (ortholog) NW_004955494 383107 387483 - 102025810 AGCD01061376;GBCE01030388;XM_005405365 XP_005405422 MODEL 39133607 snrna U4 U4 spliceosomal RNA 8846268 protein-coding Sik1 salt inducible kinase 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP binding (ortholog); cAMP response element binding protein binding (ortholog); INVOLVED IN anoikis (ortholog); cardiac muscle cell differentiation (ortholog); entrainment of circadian clock by photoperiod (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955407 38739062 38749293 + 102004242 AGCD01007812;GBBH01061904;GBDK01073494;XM_005375790 XP_005375847 MODEL 39133118 snrna U6 U6 spliceosomal RNA 8928059 protein-coding LOC102015947 olfactory receptor 478 NW_004955414 23520391 23521359 - 102015947 AGCD01015501;XM_005380518 XP_005380575 MODEL 8800952 protein-coding Gatb glutamyl-tRNA amidotransferase subunit B ENCODES a protein that exhibits glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity (ortholog); INVOLVED IN glutaminyl-tRNAGln biosynthesis via transamidation (ortholog); mitochondrial translation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN glutamyl-tRNA(Gln) amidotransferase complex (ortholog); mitochondrion (ortholog) NW_004955471 6230027 6313655 - 102024896 AGCD01053122;AGCD01053123;GBCB01056706;XM_005400896 XP_005400953 MODEL 39132877 snrna U6 U6 spliceosomal RNA 8860097 ncrna LOC102009682 uncharacterized LOC102009682 NW_004955453 7009688 7017214 + 102009682 AGCD01044736;XR_001236192 MODEL 8699801 protein-coding Dlx1 distal-less homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to BMP stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955449 2920705 2924667 - 102015676 AGCD01041839;GBCC01012740;XM_005393218 XP_005393275 MODEL 8860751 protein-coding LOC102010451 olfactory receptor 1361-like NW_004955408 1580644 1581941 + 102010451 AGCD01007965;XM_005376561 XP_005376618 MODEL 9054227 protein-coding LOC102009305 olfactory receptor 1030-like NW_004955511 1711783 1712721 + 102009305 AGCD01066377;XM_005407973 XP_005408030 MODEL 8700998 protein-coding Tex44 testis expressed 44 FOUND IN cytoplasm (ortholog) NW_004955453 4108596 4110610 - 102007083 AGCD01044678;GBDF01007868;XM_005395707 XP_005395764 MODEL 8969572 pseudo LOC102019065 dnaJ homolog subfamily B member 6-like NW_004955484 9636137 9636807 - 102019065 AGCD01058424 MODEL 8740819 pseudo LOC102003734 RWD domain-containing protein 1 pseudogene NW_004955457 11994927 11995651 + 102003734 AGCD01046997 MODEL 8995606 protein-coding LOC102007781 cytochrome b-c1 complex subunit 2, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN response to xenobiotic stimulus (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 5 (ortholog); obesity (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955493 655619 689705 + 102007781 AGCD01060859;GBDF01004785;XM_005405054 XP_005405111 MODEL 8740141 pseudo LOC102020178 T-complex protein 1 subunit alpha pseudogene NW_004955449 259525 261023 + 102020178 AGCD01041762 MODEL 8787602 protein-coding Tnfsf11 TNF superfamily member 11 ENCODES a protein that exhibits cytokine activity (ortholog); identical protein binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); bone development (ortholog); bone resorption (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH Alveolar Bone Loss (ortholog); autosomal recessive osteopetrosis 2 (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog) NW_004955518 431401 462063 + 102003574 AGCD01067735;GBCE01044414;XM_005409050;XM_005409053;XM_005409054;XM_005409055;XM_013506972 XP_005409107;XP_005409110;XP_005409111;XP_005409112;XP_013362426 MODEL 8927178 protein-coding Lias lipoic acid synthetase ENCODES a protein that exhibits lipoate synthase activity (ortholog); INVOLVED IN inflammatory response (ortholog); lipoate biosynthetic process (ortholog); neural tube closure (ortholog); ASSOCIATED WITH asthma (ortholog); autistic disorder (ortholog); brain disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955443 7889274 7907560 - 102027352 AGCD01038301;GBCQ01040238;XM_005391982;XM_005391983;XM_005391985 XP_005392039;XP_005392040;XP_005392042 MODEL 8710613 protein-coding Lrrc59 leucine rich repeat containing 59 ASSOCIATED WITH glioblastoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial nucleoid (ortholog) NW_004955451 11316139 11328107 + 102013896 AGCD01043349;GBDF01007688;XM_005394173 XP_005394230 MODEL 9032813 protein-coding LOC102003410 DNA fragmentation factor subunit alpha-like NW_004955454 12312169 12320100 + 102003410 AGCD01045408;GBDF01264302;XM_005396061 XP_005396118 MODEL 8961483 ncrna LOC102018695 uncharacterized LOC102018695 NW_004955458 9885317 9887026 - 102018695 AGCD01047664;GBDK01334184;XR_262992 MODEL 9013553 protein-coding Taf1d TATA-box binding protein associated factor, RNA polymerase I subunit D ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); RNA polymerase transcription factor SL1 complex (ortholog) NW_004955414 799124 806242 + 102020555 AGCD01014748;GBDF01189890;GBDF01189898;XM_005379694 XP_005379751 MODEL 730469463 misc_rna TUG1_4 Taurine upregulated 1 conserved region 4 8803359 protein-coding Slc6a19 solute carrier family 6 member 19 ENCODES a protein that exhibits alanine:sodium symporter activity (ortholog); glycine:sodium symporter activity (ortholog); neutral L-amino acid transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); neutral amino acid transport (ortholog); response to nutrient (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); genetic disease (ortholog); Hartnup disease (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) NW_004955504 617683 633594 + 102004299 AGCD01064824;GBCQ01005442;XM_005407040;XM_005407041 XP_005407097;XP_005407098 MODEL 9054726 protein-coding Tbx5 T-box transcription factor 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN atrial septum development (ortholog); atrial septum morphogenesis (ortholog); atrioventricular bundle cell differentiation (ortholog); ASSOCIATED WITH aortic valve disease 2 (ortholog); atrial fibrillation (ortholog); atrial heart septal defect (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955455 16133130 16217894 + 102027942 AGCD01046134;AGCD01046135;AGCD01046136;AGCD01046137;AGCD01046138;GBDK01151842;XM_005396558;XM_005396559;XM_005396560;XM_005396561;XM_005396562;XM_005396563 XP_005396615;XP_005396616;XP_005396617;XP_005396618;XP_005396619;XP_005396620 MODEL 8701934 pseudo LOC102025191 60S ribosomal protein L23a pseudogene NW_004955578 358817 360090 + 102025191 AGCD01075477 MODEL 730469320 scarna SCARNA4 Small Cajal body specific RNA 4 8998886 protein-coding Saal1 serum amyloid A like 1 INVOLVED IN positive regulation of synoviocyte proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955414 32853291 32868061 - 102015191 AGCD01015784;GBDJ01386150;XM_005380399 XP_005380456 MODEL 8988645 ncrna LOC102023055 uncharacterized LOC102023055 NW_004955426 24038441 24060641 + 102023055 AGCD01026665;GBDF01111157;XR_001234309;XR_261219 MODEL 39132416 snrna U6 U6 spliceosomal RNA 8894159 protein-coding Dusp1 dual specificity phosphatase 1 ENCODES a protein that exhibits growth factor binding (ortholog); MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN cellular response to chemokine (ortholog); cellular response to hormone stimulus (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Amyloid Neuropathies (ortholog); anti-basement membrane glomerulonephritis (ortholog); arteriosclerosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955408 25481294 25484381 - 102026722 AGCD01008647;GBCE01000631;XM_005376341 XP_005376398 MODEL 8876553 ncrna LOC102012879 uncharacterized LOC102012879 NW_004955504 2373902 2394467 + 102012879 AGCD01064857;AGCD01064858;GBCB01109961;XR_001231540;XR_264288 MODEL 8909976 pseudo LOC102022012 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 pseudogene NW_004955534 3841086 3842295 + 102022012 AGCD01070603;XM_005410477 MODEL 8811905 protein-coding Qtrt2 queuine tRNA-ribosyltransferase accessory subunit 2 ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN tRNA wobble guanine modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955427 14139024 14169402 + 102008752 AGCD01027267;GBDF01111812;XM_005386411 XP_005386468 MODEL 9067495 protein-coding Gjb5 gap junction protein beta 5 INVOLVED IN epididymis development (ortholog); labyrinthine layer morphogenesis (ortholog); spongiotrophoblast differentiation (ortholog); ASSOCIATED WITH Skin Neoplasms (ortholog) NW_004955452 12867200 12870427 + 102012726 AGCD01044369;GBCE01134793;XM_005395123 XP_005395180 MODEL 8942682 protein-coding Evi5 ecotropic viral integration site 5 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN regulation of cilium assembly (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955423 1784255 1997561 + 102021566 AGCD01023455;AGCD01023456;AGCD01023457;AGCD01023458;AGCD01023459;AGCD01023460;AGCD01023461;GBDI01158274;XM_005385043;XM_005385044;XM_013514416;XM_013514417;XM_013514418;XM_013514419;XM_013514420;XM_013514421;XM_013514422 XP_005385100;XP_005385101;XP_013369870;XP_013369871;XP_013369872;XP_013369873;XP_013369874;XP_013369875;XP_013369876 MODEL 8753358 protein-coding LOC102005187 zinc finger protein 432 NW_004955558 575848 589065 - 102005187 AGCD01073376;GBCE01115771;XM_005412661 XP_005412718 MODEL 9007885 protein-coding Bmp1 bone morphogenetic protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); metalloendopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN positive regulation of cartilage development (ortholog); proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Acute Otitis Media (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog); vesicle (ortholog) NW_004955403 45660591 45693724 + 102015913 AGCD01002826;GBBH01142618;GBCE01002413;XM_013513783 XP_013369237 MODEL 8892558 protein-coding Slc1a1 solute carrier family 1 member 1 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); D-aspartate transmembrane transporter activity (ortholog); glutamate binding (ortholog); INVOLVED IN adult behavior (ortholog); behavioral fear response (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH Atrophy (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN apical dendrite (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955434 8790685 8879757 + 102024270 AGCD01032276;AGCD01032277;AGCD01032278;GBCE01069636;XM_005388636 XP_005388693 MODEL 8854463 protein-coding Gstm3 glutathione S-transferase mu 3 ENCODES a protein that exhibits enzyme binding (ortholog); glutathione binding (ortholog); glutathione peroxidase activity (ortholog); INVOLVED IN cellular detoxification of nitrogen compound (ortholog); glutathione metabolic process (ortholog); nitrobenzene metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); sperm fibrous sheath (ortholog) NW_004955435 13253947 13256965 - 102010623 AGCD01033199;GBBH01002385;XM_005388896 XP_005388953 MODEL 8987744 ncrna LOC102017885 uncharacterized LOC102017885 NW_004955422 15698420 15702889 - 102017885 AGCD01022881;GBDF01159222;XR_001233961;XR_001233962;XR_001233963;XR_001233964 MODEL 10098285 protein-coding LOC106147299 translation initiation factor IF-2-like NW_004955540 2054185 2054592 + 106147299 AGCD01071311;GBDJ01268392;XM_013507924 XP_013363378 MODEL 9030550 protein-coding CUNH8orf48 chromosome unknown C8orf48 homolog NW_004955463 3553732 3557304 - 102013913 AGCD01049590;GBDF01125165;XM_005415371 XP_005415428 MODEL 8982470 protein-coding LOC102014047 putative RNA-binding protein 15B NW_004955417 11225049 11227515 + 102014047 AGCD01018125;AGCD01018126;GBBH01122453;XM_013512700 XP_013368154 MODEL 39132881 snrna U6 U6 spliceosomal RNA 8838920 protein-coding Xaf1 XIAP associated factor 1 ENCODES a protein that exhibits molecular sequestering activity (ortholog); INVOLVED IN negative regulation of protein-containing complex assembly (ortholog); negative regulation of type I interferon production (ortholog); response to interferon-beta (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955467 12240075 12257595 + 102009488 AGCD01051626;AGCD01051627;GBBH01163422;XM_005399676;XM_005399677 XP_005399733;XP_005399734 MODEL 8862625 protein-coding LOC102021272 mitochondrial amidoxime reducing component 2 NW_004955520 3003740 3026832 - 102021272 AGCD01068088;GBBH01189979;GBCB01025704;XM_013507064 XP_013362518 MODEL 8899200 protein-coding Lactbl1 lactamase beta like 1 NW_004955452 3006140 3023205 - 102013579 AGCD01043909;AGCD01043910;GBDF01170835;XM_005395293 XP_005395350 MODEL 8848442 pseudo LOC102019069 transcription intermediary factor 1-beta pseudogene NW_004955486 2153713 2156471 + 102019069 AGCD01058991;AGCD01058992;XM_005404301 MODEL 8989146 pseudo LOC102010453 adenosine kinase pseudogene NW_004955458 14363282 14364041 - 102010453 AGCD01047832 MODEL 9061206 protein-coding Il17a interleukin 17A ENCODES a protein that exhibits cytokine activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to glucocorticoid stimulus (ortholog); cellular response to interleukin-1 (ortholog); defense response to fungus (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH acne (ortholog); Acute Lung Injury (ortholog); acute myocardial infarction (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955411 5896435 5899911 - 102029486 AGCD01011666;GBDF01098022;XM_005377658 XP_005377715 MODEL 8912965 protein-coding Tslp thymic stromal lymphopoietin ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-7 receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Albuminuria (ortholog); allergic contact dermatitis (ortholog); FOUND IN astrocyte projection (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955418 4041529 4045534 - 102025006 AGCD01018807;XM_005382342 XP_005382399 MODEL 9037512 ncrna LOC102007790 uncharacterized LOC102007790 NW_004955426 20154984 20166755 + 102007790 AGCD01026563;AGCD01026564;GBDF01299083;XR_261208 MODEL 8995041 protein-coding Fgfr2 fibroblast growth factor receptor 2 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); axonogenesis (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH acne (ortholog); Acneiform Eruptions (ortholog); acrocephalosyndactylia (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955551 2321190 2427000 - 102016104 AGCD01072709;AGCD01072710;AGCD01072711;AGCD01072712;GBBH01063359;GBCC01015608;XM_005412181 XP_005412238 MODEL 8730423 protein-coding Tnfsf13b TNF superfamily member 13b INVOLVED IN B cell activation (ortholog); B cell costimulation (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Chronic Hepatitis B (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) NW_004955404 3536041 3573242 - 102023549 AGCD01003277;AGCD01003278;GBCQ01094161;GBDI01254603;XM_005374008 XP_005374065 MODEL 8940123 protein-coding Nr2c2 nuclear receptor subfamily 2 group C member 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cerebellum development (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); meiotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955429 17386190 17430820 + 102009089 AGCD01028854;AGCD01028855;AGCD01028856;AGCD01028857;GBDF01303357;XM_005387074;XR_261352 XP_005387131 MODEL 8856710 protein-coding Kdm8 lysine demethylase 8 ENCODES a protein that exhibits aminopeptidase activity (ortholog); chromatin binding (ortholog); endopeptidase activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); fibroblast proliferation (ortholog); G2/M transition of mitotic cell cycle (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH breast cancer (ortholog); Coffin-Siris syndrome (ortholog); esophageal cancer (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog) NW_004955493 5437344 5462849 + 102005605 AGCD01061068;GBCE01005243;XM_005405133;XM_005405134 XP_005405190;XP_005405191 MODEL 39132742 snrna U6 U6 spliceosomal RNA 8834159 protein-coding Liat1 ligand of ATE1 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); INVOLVED IN membraneless organelle assembly (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog) NW_004955481 2079002 2083141 + 102025004 AGCD01056863;GBBH01065430;XM_005402635;XM_005402636 XP_005402692;XP_005402693 MODEL 9004319 protein-coding Suox sulfite oxidase ENCODES a protein that exhibits heme binding (ortholog); molybdopterin cofactor binding (ortholog); nitrite reductase activity (ortholog); INVOLVED IN response to nutrient (ortholog); PARTICIPATES IN sulfite oxidase deficiency pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Chemical and Drug Induced Liver Injury (ortholog); epilepsy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) NW_004955458 3584390 3589764 + 102027048 AGCD01047324;AGCD01047325;GBDJ01407801;XM_005397279;XM_005397280;XM_005397281;XM_013520978 XP_005397336;XP_005397337;XP_005397338;XP_013376432 MODEL 8969750 ncrna LOC102025192 uncharacterized LOC102025192 NW_004955402 9308678 9320535 + 102025192 AGCD01000213;GBDF01192767;XR_259045 MODEL 9044256 protein-coding Slc6a2 solute carrier family 6 member 2 ENCODES a protein that exhibits actin binding (ortholog); alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN dopamine uptake (ortholog); neurotransmitter reuptake (ortholog); neurotransmitter transport (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH alcohol dependence (ortholog); anxiety disorder (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); presynaptic membrane (ortholog) NW_004955433 13170986 13216270 + 102006271 AGCD01031679;AGCD01031680;AGCD01031681;GBDK01249946;XM_005388320;XM_005388321;XM_005388322 XP_005388377;XP_005388378;XP_005388379 MODEL 9055737 ncrna LOC102015949 uncharacterized LOC102015949 NW_004955475 8524246 8594126 + 102015949 AGCD01055042;AGCD01055043;AGCD01055044;AGCD01055045;GBDK01312973;XR_263613 MODEL 8793979 pseudo LOC102009690 olfactory receptor 1361-like NW_004955408 1614860 1615787 + 102009690 AGCD01007967 MODEL 8824659 protein-coding Gatc glutamyl-tRNA amidotransferase subunit C INVOLVED IN glutaminyl-tRNAGln biosynthesis via transamidation (ortholog); mitochondrial translation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); combined oxidative phosphorylation deficiency 42 (ortholog); FOUND IN glutamyl-tRNA(Gln) amidotransferase complex (ortholog); mitochondrion (ortholog) NW_004955455 11184400 11195398 - 102011734 AGCD01045986;GBCQ01066619;XM_005396509 XP_005396566 MODEL 8881560 ncrna LOC102023059 uncharacterized LOC102023059 NW_004955429 15249622 15251278 + 102023059 AGCD01028799;XR_261334 MODEL 8955793 protein-coding Dlx2 distal-less homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN branching morphogenesis of a nerve (ortholog); cartilage development (ortholog); cell differentiation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Craniofacial Abnormalities (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955449 2907502 2909893 + 102015361 AGCD01041838;GBCE01092339;XM_005393217 XP_005393274 MODEL 39132417 snrna U6 U6 spliceosomal RNA 9003765 ncrna LOC102004479 uncharacterized LOC102004479 NW_004955480 6033165 6036994 - 102004479 AGCD01056677;GBDF01220406;XR_001230890 MODEL 9029471 pseudo LOC102012518 mortality factor 4-like protein 2 NW_004955466 3112875 3113758 - 102012518 AGCD01050786 MODEL 8730328 protein-coding LOC102020180 laminin subunit alpha-3-like NW_004955402 11841530 11911794 + 102020180 AGCD01000314;AGCD01000315;AGCD01000316;AGCD01000317;AGCD01000318;AGCD01000319;AGCD01000320;AGCD01000321;AGCD01000322;GBDK01270984;XM_013505348 XP_013360802 MODEL 8804403 protein-coding LOC102018698 laminin subunit beta-4 NW_004955410 12319755 12419631 - 102018698 AGCD01010852;AGCD01010853;AGCD01010854;AGCD01010855;AGCD01010856;AGCD01010857;GBDK01203911;XM_013510493 XP_013365947 MODEL 39133608 snrna U4 U4 spliceosomal RNA 730469180 scarna SCARNA6 Small Cajal body specific RNA 6 9041622 protein-coding Taf2 TATA-box binding protein associated factor 2 ENCODES a protein that exhibits transcription cis-regulatory region binding (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 40 (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleus (ortholog); transcription factor TFIID complex (ortholog); transcription factor TFTC complex (ortholog) NW_004955417 25457615 25515923 - 102008103 AGCD01018482;AGCD01018483;AGCD01018484;AGCD01018485;GBBH01033252;GBDK01191649;XM_005381913 XP_005381970 MODEL 8971099 protein-coding Evi5l ecotropic viral integration site 5 like ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); lung cancer (ortholog) NW_004955563 1384694 1401107 - 102021183 AGCD01074145;AGCD01074146;GBDK01234997;XM_013509169;XM_013509170;XM_013509171;XM_013509172;XM_013509173 XP_013364623;XP_013364624;XP_013364625;XP_013364626;XP_013364627 MODEL 8765904 protein-coding Sik2 salt inducible kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); negative regulation of transcription from RNA polymerase II promoter by glucose (ortholog); ASSOCIATED WITH Disease Progression (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); nucleus (ortholog) NW_004955412 13342032 13458076 + 102017966 AGCD01012833;AGCD01012834;AGCD01012835;AGCD01012836;GBCB01023497;GBDK01238669;XM_005378076 XP_005378133 MODEL 8859914 protein-coding Smim22 small integral membrane protein 22 INVOLVED IN lipid droplet formation (ortholog); positive regulation of cell migration (ortholog); regulation of actin cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog) NW_004955442 12700461 12701283 - 102004013 AGCD01037745;GBDI01078262;XM_005391268;XM_005391269 XP_005391325;XP_005391326 MODEL 39133609 snrna U4 U4 spliceosomal RNA 8771752 protein-coding LOC102009306 olfactory receptor 10AG1-like NW_004955511 845267 846223 - 102009306 AGCD01066345;XM_005408213 XP_005408270 MODEL 8995928 pseudo LOC102017887 small nuclear ribonucleoprotein Sm D2 pseudogene NW_004955422 19113364 19114426 + 102017887 AGCD01022978 MODEL 9060053 protein-coding Tex46 testis expressed 46 INVOLVED IN single fertilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog) NW_004955452 3038467 3041193 - 102011394 AGCD01043910;GBDF01000402;XM_013519471 XP_013374925 MODEL 9014257 ncrna LOC102003737 uncharacterized LOC102003737 NW_004955459 3075325 3077325 - 102003737 AGCD01048007;GBCQ01075158;XR_263012 MODEL 39132882 snrna U6 U6 spliceosomal RNA 8818731 ncrna LOC102014048 uncharacterized LOC102014048 NW_004955481 9924244 9930207 - 102014048 AGCD01057127;GBDK01357816;XR_263799 MODEL 8751704 ncrna LOC102009699 uncharacterized LOC102009699 NW_004955463 10028163 10058844 + 102009699 AGCD01049805;GBDF01179188;XR_263167;XR_263168 MODEL 8757567 protein-coding R3hcc1 R3H domain and coiled-coil containing 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lymphoma (ortholog) NW_004955403 46482255 46502194 + 102017622 AGCD01002860;GBDF01003219;XM_005373697;XM_013513971 XP_005373754;XP_013369425 MODEL 8743001 ncrna LOC102015952 uncharacterized LOC102015952 NW_004955478 10401955 10406758 + 102015952 AGCD01056132;AGCD01056133;GBDF01234513;XR_263714 MODEL 8706847 pseudo LOC102019085 40S ribosomal protein S11-like NW_004955503 5228501 5228977 - 102019085 AGCD01064700 MODEL 8859240 ncrna LOC102010457 uncharacterized LOC102010457 NW_004955462 7333301 7356659 - 102010457 AGCD01049301;AGCD01049302;GBDF01308302;XR_001236602;XR_001236603 MODEL 39133119 snrna U6 U6 spliceosomal RNA 8711688 protein-coding Tbx6 T-box transcription factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cell fate specification (ortholog); mesoderm formation (ortholog); negative regulation of neuron maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); congenital anomalies of the kidney and urinary tract (ortholog); craniosynostosis (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) NW_004955493 6888832 6894840 + 102022612 AGCD01061147;GBDK01329897;XM_005405189 XP_005405246 MODEL 8845998 protein-coding Il17b interleukin 17B ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Keratoconus 1 (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955415 5037270 5047405 + 102024451 AGCD01015989;GBBH01011723;XM_005380607;XM_005380608;XM_005380609;XM_005380610;XM_005380611;XM_013512106;XM_013512107 XP_005380664;XP_005380665;XP_005380666;XP_005380667;XP_005380668;XP_013367560;XP_013367561 MODEL 8891245 protein-coding Tnfsf14 TNF superfamily member 14 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); positive regulation of myoblast differentiation (ortholog); positive regulation of myoblast fusion (ortholog); ASSOCIATED WITH IgA glomerulonephritis (ortholog); multiple sclerosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN decoy receptor complex (ortholog); plasma membrane (ortholog); tumor necrosis factor receptor superfamily complex (ortholog) NW_004955495 2829314 2834826 + 102007031 AGCD01061803;GBDI01207122;XM_005405702 XP_005405759 MODEL 8922317 protein-coding Bmp10 bone morphogenetic protein 10 ENCODES a protein that exhibits growth factor activity (ortholog); hormone activity (ortholog); receptor serine/threonine kinase binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adult heart development (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Fibrosis (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955424 16124526 16130723 + 102018743 AGCD01024738;XM_005385656 XP_005385713 MODEL 9031964 protein-coding Sac3d1 SAC3 domain containing 1 INVOLVED IN centrosome duplication (ortholog); negative regulation of receptor signaling pathway via JAK-STAT (ortholog); regulation of immune response (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog); microtubule cytoskeleton (ortholog); nucleus (ortholog) NW_004955422 20146359 20149152 - 102021361 AGCD01023067;AGCD01023068;GBBH01082267;GBCE01123690;XM_013514235 XP_013369689 MODEL 9013531 protein-coding Dusp10 dual specificity phosphatase 10 ENCODES a protein that exhibits JUN kinase binding (ortholog); MAP kinase phosphatase activity (ortholog); mitogen-activated protein kinase p38 binding (ortholog); INVOLVED IN negative regulation of epithelial cell migration (ortholog); negative regulation of epithelial cell proliferation (ortholog); negative regulation of epithelium regeneration (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955520 2338548 2371591 + 102020480 AGCD01068078;AGCD01068079;GBDK01116090;XM_005409261;XM_013507067 XP_005409318;XP_013362521 MODEL 9065689 protein-coding Fgfr3 fibroblast growth factor receptor 3 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN alveolar secondary septum development (ortholog); axonogenesis involved in innervation (ortholog); bone development (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH absence epilepsy (ortholog); acanthosis nigricans (ortholog); achondroplasia (ortholog); FOUND IN cell surface (ortholog); cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955514 1030244 1038590 + 102017151 AGCD01067032;GBCE01053787;GBCE01053789;XM_013506763 XP_013362217 MODEL 8951005 ncrna LOC102022014 uncharacterized LOC102022014 NW_004955438 1658563 1664283 - 102022014 AGCD01034986;GBDF01119763;XR_001235138 MODEL 8940144 protein-coding Kdr kinase insert domain receptor ENCODES a protein that exhibits cadherin binding (ortholog); coreceptor activity (ortholog); cytokine binding (ortholog); INVOLVED IN branching involved in blood vessel morphogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN altered vascular endothelial growth factor signaling pathway involving proteins affecting its expression; altered vascular endothelial growth factor signaling pathway involving the main players; axitinib pharmacodynamics pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adenocarcinoma (ortholog); adhesions of uterus (ortholog); FOUND IN cell junction (ortholog); cell periphery (ortholog); cell surface (ortholog) NW_004955447 15810816 15851702 + 102009775 AGCD01041070;GBBH01206639;GBDF01114733;XM_013518554 XP_013374008 MODEL 8864939 protein-coding CUNH8orf58 chromosome unknown C8orf58 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog) NW_004955403 46024484 46027834 + 102012917 AGCD01002849;GBCB01089866;GBCQ01177202;XM_005373682 XP_005373739 MODEL 730469569 scarna SCARNA6 Small Cajal body specific RNA 6 8775071 protein-coding Slc6a3 solute carrier family 6 member 3 ENCODES a protein that exhibits amine binding (ortholog); dopamine binding (ortholog); dopamine:sodium symporter activity (ortholog); INVOLVED IN adenohypophysis development (ortholog); cognition (ortholog); dopamine biosynthetic process (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alcohol Withdrawal Delirium (ortholog); Alcohol Withdrawal Seizures (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell surface (ortholog) NW_004955504 721470 747553 - 102008439 AGCD01064826;AGCD01064827;AGCD01064828;GBDI01327941;XM_005407057 XP_005407114 MODEL 8965471 protein-coding Lrrc61 leucine rich repeat containing 61 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955491 4942934 4954705 + 102018103 AGCD01060465;XM_013504595 XP_013360049 MODEL 8959533 protein-coding LOC102023060 olfactory receptor 4A47-like NW_004955511 92806 93715 - 102023060 AGCD01066319;XM_013506408 XP_013361862 MODEL 8749792 protein-coding Lad1 ladinin 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN actin cytoskeleton (ortholog) NW_004955406 37510675 37526178 - 102015371 AGCD01006576;GBCQ01034309;XM_005375181;XM_013522219 XP_005375238;XP_013377673 MODEL 8711236 protein-coding Tulp1 TUB like protein 1 ENCODES a protein that exhibits actin filament binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN dendrite development (ortholog); detection of light stimulus involved in visual perception (ortholog); eye photoreceptor cell development (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH cone-rod dystrophy (ortholog); congenital nystagmus (ortholog); fundus dystrophy (ortholog); FOUND IN axon terminus (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955437 3405218 3417079 - 102012897 AGCD01034311;AGCD01034312;GBDF01075341;XM_013516916 XP_013372370 MODEL 8847560 protein-coding Tex47 testis expressed 47 NW_004955432 6143294 6144841 - 102019307 AGCD01030810;GBDF01195736;XM_005387981 XP_005388038 MODEL 8706350 pseudo LOC102005191 WW domain-binding protein 5-like NW_004955445 15861773 15862606 + 102005191 AGCD01039857 MODEL 9033867 protein-coding Tsn translin ENCODES a protein that exhibits identical protein binding (ortholog); mRNA binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN RISC complex assembly (ortholog); siRNA processing (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); endoribonuclease complex (ortholog); nucleoplasm (ortholog) NW_004955459 8285442 8299329 - 102012835 AGCD01048139;GBDJ01275284;XM_005397637 XP_005397694 MODEL 8852816 ncrna LOC102014050 uncharacterized LOC102014050 NW_004955420 12687317 12694051 + 102014050 AGCD01020884;GBDF01071654;XR_001233747 MODEL 8809774 protein-coding Gstm4 glutathione S-transferase mu 4 ENCODES a protein that exhibits enzyme binding (ortholog); glutathione binding (ortholog); glutathione transferase activity (ortholog); INVOLVED IN glutathione metabolic process (ortholog); long-chain fatty acid biosynthetic process (ortholog); nitrobenzene metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955435 13064691 13069734 + 102008976 AGCD01033177;GBCQ01012055;XM_005388891 XP_005388948 MODEL 8713997 protein-coding Slc1a2 solute carrier family 1 member 2 ENCODES a protein that exhibits glutamate:sodium symporter activity (ortholog); high-affinity L-glutamate transmembrane transporter activity (ortholog); L-cysteine transmembrane transporter activity (ortholog); INVOLVED IN adult behavior (ortholog); cellular response to cocaine (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN amyotrophic lateral sclerosis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN astrocyte projection (ortholog); axolemma (ortholog); axon (ortholog) NW_004955422 10929987 11082220 + 102009619 AGCD01022749;GBDK01332009;XM_005384124;XM_005384125;XM_013514335 XP_005384181;XP_005384182;XP_013369789 MODEL 8720600 pseudo LOC102018700 receptor-type tyrosine-protein phosphatase alpha pseudogene NW_004955411 21173967 21176388 - 102018700 AGCD01012069 MODEL 9011113 protein-coding LOC102012883 putative olfactory receptor 5AK3 NW_004955511 2055889 2056836 + 102012883 AGCD01066387;XM_005407982 XP_005408039 MODEL 10274402 ncrna LOC106147300 uncharacterized LOC106147300 NW_004955541 1636828 1638242 - 106147300 AGCD01071385;GBDF01041304;XR_001232132 MODEL 8710322 pseudo LOC102003411 nuclease-sensitive element-binding protein 1 pseudogene NW_004955454 11898396 11903297 + 102003411 AGCD01045401;AGCD01045402;XR_262803 MODEL 8856841 protein-coding Taf3 TATA-box binding protein associated factor 3 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); p53 binding (ortholog); transcription regulator inhibitor activity (ortholog); INVOLVED IN maintenance of protein location in nucleus (ortholog); mRNA transcription by RNA polymerase II (ortholog); negative regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955421 24263395 24414472 + 102009954 AGCD01022209;AGCD01022210;AGCD01022211;AGCD01022212;GBCQ01153140;XM_005383879;XM_005383880;XM_013513725 XP_005383936;XP_005383937;XP_013369179 MODEL 8834948 protein-coding LOC102021273 olfactory receptor 2J3-like NW_004955524 178638 179582 - 102021273 AGCD01068669;XM_005409656 XP_005409713 MODEL 8982307 protein-coding LOC102007793 solute carrier family 22 member 13 NW_004955427 25740144 25743458 + 102007793 AGCD01027551;GBDF01180895;XM_013515058 XP_013370512 MODEL 39132420 snrna U6 U6 spliceosomal RNA 8756924 ncrna LOC102017890 uncharacterized LOC102017890 NW_004955424 1228693 1258354 - 102017890 AGCD01024233;AGCD01024234;GBDF01055490;XR_001234151;XR_261022 MODEL 39132886 snrna U6 U6 spliceosomal RNA 8992407 protein-coding Gjb6 gap junction protein beta 6 ENCODES a protein that exhibits actin filament binding (ortholog); beta-tubulin binding (ortholog); gap junction channel activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); ear morphogenesis (ortholog); gap junction assembly (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 3B (ortholog); autosomal recessive nonsyndromic deafness 1A (ortholog); autosomal recessive nonsyndromic deafness 1B (ortholog); FOUND IN actin filament (ortholog); apical plasma membrane (ortholog); cell junction (ortholog) NW_004955497 1018610 1027593 - 102009077 AGCD01062445;AGCD01062446;GBDF01280916;XM_005406302;XM_005406304;XM_005406305;XM_005406306 XP_005406359;XP_005406361;XP_005406362;XP_005406363 MODEL 8809659 pseudo LOC102004480 vacuole membrane protein 1 pseudogene NW_004955481 686239 728766 + 102004480 AGCD01056799;AGCD01056800;AGCD01056801;AGCD01056802;AGCD01056803 MODEL 8789286 pseudo LOC102012529 nicotinamide phosphoribosyltransferase-like NW_004955414 15004805 15007553 + 102012529 AGCD01015167 MODEL 8830631 pseudo LOC102009701 heterogeneous nuclear ribonucleoprotein A1-like NW_004955411 2718176 2739446 - 102009701 AGCD01011515;AGCD01011516 MODEL 8955744 protein-coding Gatd1 glutamine amidotransferase class 1 domain containing 1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); stomach cancer (ortholog) NW_004955476 11350827 11354844 + 102011863 AGCD01055453;GBBH01185293;GBDF01127137;XM_013502980;XM_013502981 XP_013358434;XP_013358435 MODEL 8707896 protein-coding R3hcc1l R3H domain and coiled-coil containing 1 like ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN exon-exon junction complex (ortholog) NW_004955507 4150389 4228412 + 102011345 AGCD01065640;AGCD01065641;AGCD01065642;GBDF01123772;XM_005407656;XM_005407657;XM_005407659;XM_005407660 XP_005407713;XP_005407714;XP_005407716;XP_005407717 MODEL 8919289 protein-coding LOC102025195 vomeronasal type-1 receptor 4-like NW_004955584 426988 427899 - 102025195 AGCD01075941;XM_005414411 XP_005414468 MODEL 9011229 protein-coding Lif LIF interleukin 6 family cytokine ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); leukemia inhibitory factor receptor binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); astrocyte differentiation (ortholog); blood vessel remodeling (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Cardiomegaly (ortholog); colon cancer (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog) NW_004955455 4489515 4505439 - 102016978 AGCD01045676;AGCD01045677;GBBH01132054;XM_005396245;XM_005396246;XM_005396248;XM_013520369 XP_005396302;XP_005396303;XP_005396305;XP_013375823 MODEL 8949359 protein-coding Supt16h SPT16 homolog, facilitates chromatin remodeling subunit ENCODES a protein that exhibits H2A-H2B histone complex chaperone activity (ortholog); INVOLVED IN nucleosome disassembly (ortholog); transcription elongation-coupled chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN FACT complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955550 2074646 2114634 - 102012690 AGCD01072611;GBDF01087695;XM_005412116;XM_013508580 XP_005412173;XP_013364034 MODEL 8742537 protein-coding Il17c interleukin 17C ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN neutrophil differentiation (ortholog); positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); FOUND IN extracellular region (ortholog) NW_004955541 2568941 2570440 + 102025843 AGCD01071416;XM_013507999 XP_013363453 MODEL 39133610 snrna U4 U4 spliceosomal RNA 8734583 protein-coding Xbp1 X-box binding protein 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); angiogenesis (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; forkhead class A signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); borna disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955455 3037885 3041827 - 102023773 AGCD01045609;GBDI01012427;GBDK01000036;XM_013520381 XP_013375835 MODEL 8873020 protein-coding Bmp15 bone morphogenetic protein 15 INVOLVED IN ovarian cumulus expansion (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH amenorrhea (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog) NW_004955543 2304112 2345376 + 102018029 AGCD01071649;AGCD01071650;GBCE01042542;XM_005411357;XM_005411359;XM_005411360;XM_013508137;XM_013508138;XM_013508139;XM_013508140 XP_005411414;XP_005411416;XP_005411417;XP_013363591;XP_013363592;XP_013363593;XP_013363594 MODEL 8849354 protein-coding Sik3 SIK family kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cartilage development involved in endochondral bone morphogenesis (ortholog); endochondral ossification (ortholog); limb morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955412 18177175 18280687 - 102023676 AGCD01012927;AGCD01012928;AGCD01012929;GBDK01233303;XM_005378194;XM_013511104;XM_013511105;XM_013511106;XM_013511107;XM_013511108 XP_005378251;XP_013366558;XP_013366559;XP_013366560;XP_013366561;XP_013366562 MODEL 8945118 protein-coding Dusp11 dual specificity phosphatase 11 ENCODES a protein that exhibits phosphatase activity (ortholog); polynucleotide 5'-phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955424 11978118 11990169 - 102011458 AGCD01024584;GBDK01239255;XM_005385545;XM_005385546 XP_005385602;XP_005385603 MODEL 10162634 ncrna LOC106147301 uncharacterized LOC106147301 NW_004955408 1310006 1313641 - 106147301 AGCD01007954;GBDJ01000695;XR_001232136 MODEL 8845043 protein-coding Dlx3 distal-less homeobox 3 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN blood vessel development (ortholog); BMP signaling pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 4 (ortholog); ectodermal dysplasia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955451 11635027 11640091 + 102017293 AGCD01043360;AGCD01043361;GBCE01085065;XM_005394184 XP_005394241 MODEL 8710803 protein-coding Sack1a scaffolding CK1 anchoring protein A ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell population proliferation (ortholog); epidermal growth factor receptor signaling pathway (ortholog); positive regulation of adipose tissue development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Disease Progression (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955540 2070396 2095341 + 102028131 AGCD01071312;GBDK01170278;XM_005410920;XM_005410921 XP_005410977;XP_005410978 MODEL 8840529 pseudo LOC102003747 aldo-keto reductase family 1 member B10-like NW_004955467 4392827 4400286 + 102003747 AGCD01051366 MODEL 8737418 protein-coding LOC102020183 leukocyte immunoglobulin-like receptor subfamily B member 1 NW_004955604 22736 25050 + 102020183 AGCD01076859;GBBH01115395;GBCE01054578;XM_005414876 XP_005414933 MODEL 8769986 protein-coding CUNH8orf74 chromosome unknown C8orf74 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955403 52224529 52240276 + 102023548 AGCD01003003;GBDF01046056;XM_005373805 XP_005373862 MODEL 8738159 ncrna LOC102015956 uncharacterized LOC102015956 NW_004955481 10026699 10028031 + 102015956 AGCD01057133;GBDK01357814;XR_001230929 MODEL 9010256 protein-coding Nr2c2ap nuclear receptor 2C2 associated protein ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955524 2634302 2635982 + 102006275 AGCD01068827;GBCB01023775;GBDF01001806;XM_005409691 XP_005409748 MODEL 9031881 pseudo LOC102019090 60S ribosomal protein L5 pseudogene NW_004955428 18851546 18852411 - 102019090 AGCD01028072 MODEL 8963640 protein-coding Lrrc63 leucine rich repeat containing 63 NW_004955518 3891612 3940698 + 102019727 AGCD01067811;AGCD01067812;AGCD01067813;AGCD01067814;AGCD01067815;GBDF01222845;XM_005409100;XM_005409101;XM_005409102;XM_005409103;XR_264570 XP_005409157;XP_005409158;XP_005409159;XP_005409160 MODEL 39132743 snrna U6 U6 spliceosomal RNA 39133120 snrna U6 U6 spliceosomal RNA 9025248 pseudo LOC102012538 peroxiredoxin-6-like NW_004955482 9359566 9361203 + 102012538 AGCD01057566 MODEL 8843810 protein-coding LOC102010459 potassium channel subfamily U member 1-like NW_004955463 12698574 12705738 + 102010459 AGCD01049856;AGCD01049857;GBBH01200395;XM_005398408 XP_005398465 MODEL 8781168 protein-coding Evl Enah/Vasp-like ENCODES a protein that exhibits profilin binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); cellular response to type II interferon (ortholog); negative regulation of epithelial cell migration (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); lamellipodium (ortholog) NW_004955438 21198761 21298657 + 102004644 AGCD01035530;AGCD01035531;AGCD01035532;GBDK01078332;XM_005390426;XM_005390427;XM_005390428 XP_005390483;XP_005390484;XP_005390485 MODEL 8992637 pseudo LOC102018702 U2 small nuclear ribonucleoprotein B'' pseudogene NW_004955465 10212506 10213202 - 102018702 AGCD01050503 MODEL 8982459 protein-coding Gstp1 glutathione S-transferase pi 1 ENCODES a protein that exhibits dinitrosyl-iron complex binding (ortholog); fatty acid binding (ortholog); glutathione peroxidase activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to cell-matrix adhesion (ortholog); cellular response to epidermal growth factor stimulus (ortholog); PARTICIPATES IN glutathione conjugation pathway; paracetamol pharmacokinetics pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955422 17914228 17916918 - 102012972 AGCD01022932;GBCQ01007365;XM_005384308 XP_005384365 MODEL 8909570 ncrna LOC102009308 uncharacterized LOC102009308 NW_004955431 13033825 13037782 - 102009308 AGCD01030276;GBDF01225489;XR_001234590 MODEL 8899166 protein-coding Slc1a3 solute carrier family 1 member 3 ENCODES a protein that exhibits acidic amino acid transmembrane transporter activity (ortholog); amino acid binding (ortholog); glutamate binding (ortholog); INVOLVED IN auditory behavior (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); cellular response to cocaine (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell periphery (ortholog) NW_004955426 21371985 21450749 + 102012877 AGCD01026587;GBDI01024508;XM_005386210;XM_013514995 XP_005386267;XP_013370449 MODEL 8849227 protein-coding Fgfr4 fibroblast growth factor receptor 4 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); heparin binding (ortholog); INVOLVED IN alveolar secondary septum development (ortholog); cell migration (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); adult respiratory distress syndrome (ortholog); Brain Neoplasms (ortholog); FOUND IN cell-cell junction (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955408 29370480 29383531 + 102019778 AGCD01008753;AGCD01008754;GBCQ01129403;XM_005376410;XM_005376412;XM_005376413;XM_005376414 XP_005376467;XP_005376469;XP_005376470;XP_005376471 MODEL 9062204 protein-coding Kdsr 3-ketodihydrosphingosine reductase ENCODES a protein that exhibits 3-dehydrosphinganine reductase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); glycosphingolipid biosynthetic process (ortholog); sphingolipid biosynthetic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); erythrokeratodermia variabilis et progressiva 4 (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955402 47092779 47130131 - 102009132 AGCD01001171;AGCD01001172;GBCQ01072862;GBDF01003787;XM_013511228 XP_013366682 MODEL 9057954 protein-coding Taf4 TATA-box binding protein associated factor 4 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN DNA-templated transcription (ortholog); DNA-templated transcription initiation (ortholog); mRNA transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 73 (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromatin (ortholog); MLL1 complex (ortholog); nucleoplasm (ortholog) NW_004955528 1951952 2020592 + 102013646 AGCD01069580;GBBH01127372;GBCQ01129362;XM_013507495 XP_013362949 MODEL 8782271 ncrna LOC102020185 uncharacterized LOC102020185 NW_004955403 16028869 16105664 - 102020185 AGCD01002056;AGCD01002057;AGCD01002058;GBDI01162203;XR_001233327;XR_001233329 MODEL 8895236 ncrna LOC102004481 uncharacterized LOC102004481 NW_004955482 1525707 1528873 - 102004481 AGCD01057219;AGCD01057220;GBDI01053452;XR_001230959;XR_263819 MODEL 9057974 ncrna LOC102014053 uncharacterized LOC102014053 NW_004955420 22475431 22480000 - 102014053 AGCD01021201;GBDJ01342875;XR_001233774;XR_001233775;XR_001233776;XR_260737 MODEL 8843695 protein-coding Tnfsf15 TNF superfamily member 15 ASSOCIATED WITH colorectal cancer (ortholog); Crohn's disease (ortholog); Enteritis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955419 12863617 12884498 + 102006778 AGCD01019987;GBCQ01154220;XM_005382621 XP_005382678 MODEL 8891763 protein-coding Smim23 small integral membrane protein 23 NW_004955408 24626468 24633678 + 102022787 AGCD01008621;GBDF01002835;XM_005376330;XM_013507143;XM_013507147 XP_005376387;XP_013362597;XP_013362601 MODEL 8873123 pseudo LOC102022018 poly [ADP-ribose] polymerase 6 pseudogene NW_004955543 115943 118540 - 102022018 AGCD01071557 MODEL 8842883 protein-coding Gatd3 glutamine amidotransferase class 1 domain containing 3 ASSOCIATED WITH autistic disorder (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955407 41247749 41255369 - 102023005 AGCD01007862;AGCD01007863;GBBH01031990;GBDI01008445;XM_013505403 XP_013360857 MODEL 8901590 pseudo LOC102025207 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L pseudogene NW_004955454 3332608 3333948 + 102025207 AGCD01045067 MODEL 39132027 scarna SCARNA7 small Cajal body-specific RNA 7 8771331 ncrna LOC102003412 uncharacterized LOC102003412 NW_004955407 34652125 34732104 - 102003412 AGCD01007724;AGCD01007725;GBDF01014151;XR_001231192;XR_259607 MODEL 8924655 protein-coding Bmp2 bone morphogenetic protein 2 ENCODES a protein that exhibits BMP receptor binding (ortholog); co-receptor binding (ortholog); cytokine activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); aortic valve development (ortholog); atrioventricular canal morphogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); atrial heart septal defect 1 (ortholog); bone disease (ortholog); FOUND IN BMP receptor complex (ortholog); cell surface (ortholog); extracellular region (ortholog) NW_004955415 17048374 17058172 + 102018921 AGCD01016408;XM_005380857 XP_005380914 MODEL 8719517 protein-coding LOC102023061 uncharacterized LOC102023061 NW_004955513 3164898 3174163 + 102023061 AGCD01066896;GBDF01158696;XM_005408461 XP_005408518 MODEL 9063223 ncrna LOC102017891 uncharacterized LOC102017891 NW_004955424 10729774 10746212 - 102017891 AGCD01024526;GBDK01082355;XR_001234189;XR_001234190;XR_001234191;XR_001234192;XR_001234193;XR_001234194;XR_001234195;XR_001234196;XR_001234197 MODEL 39132198 snrna U6 U6 spliceosomal RNA 8871884 protein-coding Lag3 lymphocyte activating 3 ENCODES a protein that exhibits MHC class II protein binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); negative regulation of interleukin-2 production (ortholog); negative regulation of regulatory T cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955413 4379529 4385456 + 102029278 AGCD01013612;GBBH01189509;XM_005378825 XP_005378882 MODEL 9049295 protein-coding Dusp12 dual specificity phosphatase 12 ENCODES a protein that exhibits kinase binding (ortholog); phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN positive regulation of hexokinase activity (ortholog); protein dephosphorylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955462 14555919 14565046 - 102016678 AGCD01049450;GBCB01001840;XM_005398286;XM_005398287;XM_013521439 XP_005398343;XP_005398344;XP_013376893 MODEL 39132888 snrna U6 U6 spliceosomal RNA 10380323 protein-coding Tex48 testis expressed 48 NW_004955419 12969338 12982474 + 106148269 AGCD01019989;AGCD01019990;GBDF01003927;XM_013513086;XM_013513087;XM_013513088;XM_013513089;XM_013513090 XP_013368540;XP_013368541;XP_013368542;XP_013368543;XP_013368544 MODEL 8833961 protein-coding Dlx4 distal-less homeobox 4 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); melanoma (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955451 11652249 11660083 - 102017833 AGCD01043362;GBCE01057103;XM_005394185;XM_005394186;XM_005394187;XM_013519108;XM_013519109 XP_005394242;XP_005394243;XP_005394244;XP_013374562;XP_013374563 MODEL 9032181 pseudo LOC102005195 arylacetamide deacetylase-like NW_004955448 2874204 2882455 - 102005195 AGCD01041291 MODEL 8924957 protein-coding Tbxa2r thromboxane A2 receptor ENCODES a protein that exhibits thromboxane receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); inflammatory response (ortholog); negative regulation of cell migration involved in sprouting angiogenesis (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); aspirin-induced respiratory disease (ortholog); FOUND IN acrosomal vesicle (ortholog); plasma membrane (ortholog) NW_004955495 5539382 5557441 - 102012555 AGCD01062011;AGCD01062012;AGCD01062013;GBBH01180494;GBDK01026478;XM_013505254 XP_013360708 MODEL 8892349 protein-coding Tsnare1 t-SNARE domain containing 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955454 743022 1203483 - 102020635 AGCD01044960;AGCD01044961;AGCD01044962;AGCD01044963;AGCD01044964;AGCD01044965;GBDF01179211;XM_013520010 XP_013375464 MODEL 8877912 pseudo LOC102009712 olfactory receptor 2S2-like NW_004955472 459622 466367 + 102009712 AGCD01053339 MODEL 8701297 protein-coding LOC102015958 zinc finger protein 208-like NW_004955482 102076 193169 - 102015958 AGCD01057161;AGCD01057162;AGCD01057163;AGCD01057164;AGCD01057165;GBCE01005323;XM_005402935 XP_005402992 MODEL 8879718 pseudo LOC102019091 SAP domain-containing ribonucleoprotein pseudogene NW_004955428 19048985 19053511 - 102019091 AGCD01028081;XM_005386848 MODEL 8941615 protein-coding LOC102012885 olfactory receptor 1052-like NW_004955511 1009362 1010300 + 102012885 AGCD01066353;XM_005408220 XP_005408277 MODEL 8987502 protein-coding R3hdm1 R3H domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955440 2908721 3076522 + 102008573 AGCD01036228;AGCD01036229;AGCD01036230;AGCD01036231;GBDF01053670;XM_013517471;XM_013517472;XM_013517473;XM_013517474;XM_013517475;XM_013517476;XM_013517477;XM_013517478;XM_013517479 XP_013372925;XP_013372926;XP_013372927;XP_013372928;XP_013372929;XP_013372930;XP_013372931;XP_013372932;XP_013372933 MODEL 8974590 protein-coding LOC102005196 uncharacterized LOC102005196 NW_004955448 10972348 11016806 + 102005196 AGCD01041508;AGCD01041509;AGCD01041510;GBDF01042677;XM_013518600 XP_013374054 MODEL 8974897 protein-coding Lifr LIF receptor subunit alpha ENCODES a protein that exhibits ciliary neurotrophic factor receptor activity (ortholog); ciliary neurotrophic factor receptor binding (ortholog); coreceptor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); bone development (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN ciliary neurotrophic factor receptor complex (ortholog); extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955426 23045867 23093694 - 102019413 AGCD01026633;AGCD01026634;GBCQ01002072;XM_013514985;XM_013514986 XP_013370439;XP_013370440 MODEL 8838849 protein-coding Tnfsf18 TNF superfamily member 18 ENCODES a protein that exhibits identical protein binding (ortholog); tumor necrosis factor receptor superfamily binding (ortholog); INVOLVED IN activated CD4-positive, alpha-beta T cell proliferation (ortholog); negative regulation of T-helper 17 cell lineage commitment (ortholog); positive regulation of cell adhesion (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); FOUND IN cell surface (ortholog) NW_004955406 13391162 13402479 - 102004670 AGCD01005937;XM_005374865 XP_005374922 MODEL 8909495 protein-coding Slc6a4 solute carrier family 6 member 4 ENCODES a protein that exhibits actin filament binding (ortholog); antiporter activity (ortholog); cocaine binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); brain morphogenesis (ortholog); cellular response to cGMP (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH AIDS Dementia Complex (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN endomembrane system (ortholog); endosome membrane (ortholog); focal adhesion (ortholog) NW_004955481 3088440 3122421 + 102005469 AGCD01056893;AGCD01056894;GBDK01358674;XM_005402661;XM_005402662;XM_005402663;XM_005402664;XM_013503528 XP_005402718;XP_005402719;XP_005402720;XP_005402721;XP_013358982 MODEL 8812348 protein-coding Supt20h SPT20 homolog, SAGA complex component INVOLVED IN positive regulation of gluconeogenesis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN SAGA-type complex (ortholog) NW_004955431 9013325 9050844 + 102025150 AGCD01030153;AGCD01030154;GBDF01244633;XM_013515792;XM_013515793;XM_013515794;XM_013515795;XM_013515796;XM_013515797;XM_013515798;XM_013515799;XM_013515800;XM_013515801;XM_013515802;XM_013515803;XM_013515804;XM_013515806;XM_013515807;XM_013515808;XM_013515809;XM_013515810;XM_013515811 XP_013371246;XP_013371247;XP_013371248;XP_013371249;XP_013371250;XP_013371251;XP_013371252;XP_013371253;XP_013371254;XP_013371255;XP_013371256;XP_013371257;XP_013371258;XP_013371260;XP_013371261;XP_013371262;XP_013371263;XP_013371264;XP_013371265 MODEL 8700722 protein-coding Sike1 suppressor of IKBKE 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of hippo signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); FAR/SIN/STRIPAK complex (ortholog) NW_004955435 18066428 18076422 - 102022534 AGCD01033383;AGCD01033384;GBCQ01129412;XM_005389015;XM_013516466 XP_005389072;XP_013371920 MODEL 10068094 pseudo LOC106147302 60S ribosomal protein L39 pseudogene NW_004955541 406710 408772 + 106147302 AGCD01071351 MODEL 8702571 protein-coding LOC102021276 disintegrin and metalloproteinase domain-containing protein 5-like NW_004955536 3528401 3648035 - 102021276 AGCD01070827;AGCD01070828;AGCD01070829;AGCD01070830;GBDF01008700;XM_005410548;XM_005410549;XM_013507719;XM_013507720 XP_005410605;XP_005410606;XP_013363173;XP_013363174 MODEL 8840649 ncrna LOC102007794 uncharacterized LOC102007794 NW_004955506 4248624 4261163 - 102007794 AGCD01065330;GBDI01281509;XR_264348 MODEL 8881083 pseudo LOC102003752 26S protease regulatory subunit 4 pseudogene NW_004955469 9387077 9396448 - 102003752 AGCD01052500;AGCD01052501 MODEL 8713666 protein-coding Gjb7 gap junction protein beta 7 ENCODES a protein that exhibits gap junction channel activity (ortholog); INVOLVED IN transmembrane transport (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog) NW_004955411 14285142 14303036 - 102024320 AGCD01011913;AGCD01011914;GBBH01089738;XM_005377716;XM_005377717;XM_005377718 XP_005377773;XP_005377774;XP_005377775 MODEL 8938194 protein-coding Nr2e1 nuclear receptor subfamily 2 group E member 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); INVOLVED IN aggressive behavior (ortholog); amygdala development (ortholog); anterior commissure morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955411 33303765 33325221 + 102010783 AGCD01012354;GBBH01013577;XM_005377843;XM_013510722 XP_005377900;XP_013366176 MODEL 9042470 protein-coding Lrrc66 leucine rich repeat containing 66 ASSOCIATED WITH hepatocellular carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955447 18493752 18497789 + 102011710 AGCD01041175;GBCQ01014491;XM_005415352 XP_005415409 MODEL 8808899 protein-coding Sack1b scaffolding CK1 anchoring protein B ENCODES a protein that exhibits D-type glycerophospholipase activity (ortholog); epidermal growth factor receptor binding (ortholog); phosphatidylinositol 3-kinase catalytic subunit binding (ortholog); INVOLVED IN cell population proliferation (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) NW_004955411 1248945 1306848 - 102005014 AGCD01011475;AGCD01011476;GBDJ01264594;XM_005377589;XM_013510904 XP_005377646;XP_013366358 MODEL 39133121 snrna U6 U6 spliceosomal RNA 8841217 pseudo LOC102010460 40S ribosomal protein S14 pseudogene NW_004955463 13024771 13025227 - 102010460 AGCD01049860 MODEL 9047737 protein-coding LOC102020186 ubiquitin carboxyl-terminal hydrolase 42-like NW_004955403 23065559 23090976 - 102020186 AGCD01002238;AGCD01002239;AGCD01002240;GBDF01016577;XM_013512884 XP_013368338 MODEL 39133611 snrna U4 U4 spliceosomal RNA 8879248 protein-coding Tulp2 TUB like protein 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955559 1740750 1749036 + 102029336 AGCD01073664;AGCD01073665;GBDF01006508;XM_013509033;XM_013509034;XM_013509035 XP_013364487;XP_013364488;XP_013364489 MODEL 8946871 protein-coding Evpl envoplakin INVOLVED IN keratinocyte differentiation (ortholog); regulation of antibacterial peptide production (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cornified envelope (ortholog); cytosol (ortholog); intermediate filament cytoskeleton (ortholog) NW_004955506 6227488 6246339 + 102007355 AGCD01065403;AGCD01065404;GBDK01022181;XM_005407464 XP_005407521 MODEL 8982554 protein-coding LOC102018708 free fatty acid receptor 2 NW_004955468 4681077 4683818 + 102018708 AGCD01051919;XM_005400052;XM_013522278;XM_013522279 XP_005400109;XP_013377732;XP_013377733 MODEL 8889748 pseudo LOC102009309 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955514 3732965 3733577 - 102009309 AGCD01067111 MODEL 8793600 protein-coding LOC102025212 zinc finger protein 709-like NW_004955408 2924 43257 + 102025212 AGCD01007905;AGCD01007906;AGCD01007907;GBDF01011173;XM_005375996;XM_013507810 XP_005376053;XP_013363264 MODEL 8926564 protein-coding Slc1a4 solute carrier family 1 member 4 ENCODES a protein that exhibits chloride channel activity (ortholog); L-alanine transmembrane transporter activity (ortholog); L-aspartate transmembrane transporter activity (ortholog); INVOLVED IN cognition (ortholog); hydroxyproline transport (ortholog); L-alanine import across plasma membrane (ortholog); PARTICIPATES IN argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; citrullinemia pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN centrosome (ortholog); dendrite (ortholog); intermediate filament (ortholog) NW_004955424 19474082 19499592 - 102005394 AGCD01024827;GBBH01089723;XM_005385695 XP_005385752 MODEL 9026866 protein-coding Fgfrl1 fibroblast growth factor receptor like 1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); heparin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); diaphragm development (ortholog); heart valve morphogenesis (ortholog); ASSOCIATED WITH congenital diaphragmatic hernia (ortholog); COVID-19 (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cell-cell contact zone (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955514 499526 509208 + 102011793 AGCD01067013;GBCB01073055;XM_005408687 XP_005408744 MODEL 626189130 scarna SCARNA8 Small Cajal body specific RNA 8 9046568 protein-coding Keap1 kelch like ECH associated protein 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); identical protein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN cellular response to carbohydrate stimulus (ortholog); cellular response to interleukin-4 (ortholog); cellular response to oxidative stress (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH alcohol-associated liver disease (ortholog); amyotrophic lateral sclerosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN actin filament (ortholog); adherens junction (ortholog); Cul3-RING ubiquitin ligase complex (ortholog) NW_004955495 1704695 1711339 - 102006474 AGCD01061712;GBBH01001242;GBDK01022727;XM_013505131 XP_013360585 MODEL 39132201 snrna U6 U6 spliceosomal RNA 9018250 protein-coding LOC102021279 AFG3-like protein 1 NW_004955541 3433520 3460695 + 102021279 AGCD01071448;AGCD01071449;GBDF01049325;XM_013507965 XP_013363419 MODEL 39132744 snrna U6 U6 spliceosomal RNA 8839203 protein-coding Taf4b TATA-box binding protein associated factor 4b ENCODES a protein that exhibits DNA binding (ortholog); NF-kappaB binding (ortholog); INVOLVED IN mRNA transcription by RNA polymerase II (ortholog); positive regulation of stem cell proliferation (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) NW_004955402 14296202 14425298 + 102020862 AGCD01000424;AGCD01000425;AGCD01000426;AGCD01000427;AGCD01000428;GBDF01013559;GBDF01013560;XM_013505611 XP_013361065 MODEL 8737038 protein-coding CUNH8orf76 chromosome unknown C8orf76 homolog NW_004955540 2097912 2115921 - 102028896 AGCD01071312;AGCD01071313;AGCD01071314;GBDF01157584;XM_005410922;XM_005410923 XP_005410979;XP_005410980 MODEL 8962851 protein-coding Dlx5 distal-less homeobox 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); HMG box domain binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); axon guidance (ortholog); axonogenesis (ortholog); ASSOCIATED WITH Birth Weight (ortholog); bone development disease (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955432 13429832 13434160 - 102021270 AGCD01031016;GBDJ01090320;XM_005388074;XM_005388075 XP_005388131;XP_005388132 MODEL 8816385 pseudo LOC102004483 LYR motif-containing protein 2 pseudogene NW_004955483 1814352 1814618 + 102004483 AGCD01057654;XM_005403350 MODEL 8895369 pseudo LOC102009713 tubulin alpha-1 chain-like NW_004955415 27942717 27943523 - 102009713 AGCD01016636 MODEL 39131424 protein-coding XBP1 X-box binding protein 1 8711253 pseudo LOC102014055 40S ribosomal protein S29 pseudogene NW_004955421 41674 43155 + 102014055 AGCD01021542 MODEL 8747116 protein-coding LOC102019093 vomeronasal type-1 receptor 90-like NW_004955429 12472731 12473747 - 102019093 AGCD01028719;XM_005387251 XP_005387308 MODEL 8763848 protein-coding LOC102015959 N-acetyllactosaminide alpha-1,3-galactosyltransferase-like 1 NW_004955419 6564839 6604214 + 102015959 AGCD01019859;AGCD01019860;XM_005382563;XM_005382565 XP_005382620;XP_005382622 MODEL 8928170 pseudo LOC102022019 52 kDa repressor of the inhibitor of the protein kinase-like NW_004955439 8849377 8852363 - 102022019 AGCD01035814;AGCD01035815 MODEL 8792107 protein-coding Smim24 small integral membrane protein 24 ASSOCIATED WITH colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955495 5083596 5086321 + 102020683 AGCD01061973;GBDJ01166045;XM_005405837 XP_005405894 MODEL 8865708 protein-coding Gstz1 glutathione S-transferase zeta 1 ENCODES a protein that exhibits glutathione transferase activity (ortholog); identical protein binding (ortholog); maleylacetoacetate isomerase activity (ortholog); INVOLVED IN cellular detoxification (ortholog); glutathione metabolic process (ortholog); L-tyrosine catabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955438 1218990 1231407 + 102013117 AGCD01034976;GBDF01048958;XM_005390189;XM_005390190;XM_013517152;XM_013517153;XM_013517154 XP_005390246;XP_005390247;XP_013372606;XP_013372607;XP_013372608 MODEL 8981962 protein-coding Gatm glycine amidinotransferase ENCODES a protein that exhibits amidinotransferase activity (ortholog); glycine amidinotransferase activity (ortholog); INVOLVED IN creatine biosynthetic process (ortholog); embryonic liver development (ortholog); kidney development (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; creatine metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute kidney failure (ortholog); AGAT deficiency (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955409 8068524 8084603 + 102020986 AGCD01009377;GBBH01011356;XM_005376731 XP_005376788 MODEL 8770314 pseudo LOC102010465 acyl carrier protein, mitochondrial pseudogene NW_004955467 7728117 7728770 - 102010465 AGCD01051438;XM_005399383 MODEL 8855067 pseudo LOC102003415 keratinocyte-associated protein 2-like NW_004955457 11849410 11853825 + 102003415 AGCD01046988 MODEL 39132890 snrna U6 U6 spliceosomal RNA 9018562 protein-coding Bmp2k BMP2 inducible kinase ENCODES a protein that exhibits phosphatase regulator activity (ortholog); protein kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN regulation of bone mineralization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955433 3207512 3327688 + 102007147 AGCD01031417;AGCD01031418;AGCD01031419;AGCD01031420;GBDF01286250;XM_013516102 XP_013371556 MODEL 8840237 protein-coding Sil1 SIL1 nucleotide exchange factor ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cataract (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955418 1322644 1583352 + 102022083 AGCD01018715;AGCD01018716;AGCD01018717;AGCD01018718;AGCD01018719;AGCD01018720;AGCD01018721;AGCD01018722;AGCD01018723;GBDF01053304;XM_005382084;XM_005382085;XM_005382087;XM_013512922;XM_013512923 XP_005382141;XP_005382142;XP_005382144;XP_013368376;XP_013368377 MODEL 8784639 protein-coding Dusp14 dual specificity phosphatase 14 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955451 515889 537762 - 102023547 AGCD01042937;AGCD01042938;GBCE01077211;XM_005393924;XM_005393925;XM_005393926;XM_013519169;XM_013519170;XM_013519171 XP_005393981;XP_005393982;XP_005393983;XP_013374623;XP_013374624;XP_013374625 MODEL 10287539 protein-coding Il17d interleukin 17D ENCODES a protein that exhibits cytokine activity (ortholog); protein homodimerization activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN inflammatory response (ortholog); negative regulation of hemopoiesis (ortholog); positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Chronic Hepatitis C (ortholog); Cytomegalovirus Infections (ortholog); hidradenitis suppurativa (ortholog); FOUND IN extracellular region (ortholog) NW_004955497 1499700 1506557 + 106146836 AGCD01062463;AGCD01062464;GBDF01304881;XM_013505463 XP_013360917 MODEL 8862851 protein-coding Tsnax translin associated factor X ENCODES a protein that exhibits A2A adenosine receptor binding (ortholog); protein-containing complex binding (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN mitotic DNA damage checkpoint signaling (ortholog); RISC complex assembly (ortholog); siRNA processing (ortholog); FOUND IN cytoplasm (ortholog); endoribonuclease complex (ortholog); nucleoplasm (ortholog) NW_004955492 7304982 7335512 - 102006784 AGCD01060784;AGCD01060785;AGCD01060786;GBDF01124616;XM_005404969;XM_013504735 XP_005405026;XP_013360189 MODEL 8989259 protein-coding LOC102012891 uncharacterized LOC102012891 NW_004955523 1028153 1037283 - 102012891 AGCD01068489;GBCE01116809;XM_013507151;XR_001231927;XR_001231928;XR_001231929;XR_001231930;XR_001231931;XR_001231932;XR_001231933;XR_001231934;XR_001231935;XR_001231936;XR_001231937 XP_013362605 MODEL 8882684 protein-coding LOC102005199 small integral membrane protein 15-like NW_004955588 770792 771016 + 102005199 AGCD01076122;XM_005414524 XP_005414581 MODEL 39133612 snrna U4 U4 spliceosomal RNA 8723662 protein-coding LOC102023062 lipocalin-15 NW_004955513 4882042 4887684 - 102023062 AGCD01066943;GBBH01057723;XM_005408552;XM_005408553;XM_013506566 XP_005408609;XP_005408610;XP_013362020 MODEL 9017060 protein-coding Tnfsf4 TNF superfamily member 4 ENCODES a protein that exhibits receptor ligand activity (ortholog); tumor necrosis factor receptor binding (ortholog); tumor necrosis factor receptor superfamily binding (ortholog); INVOLVED IN acute inflammatory response (ortholog); CD4-positive, alpha-beta T cell costimulation (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical squamous cell carcinoma (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) NW_004955406 13477077 13493309 - 102005005 AGCD01005938;XM_005374866 XP_005374923 MODEL 8771072 pseudo LOC102009311 mitochondrial fission factor pseudogene NW_004955516 2393052 2393940 - 102009311 AGCD01067455 MODEL 10364029 ncrna LOC106147303 uncharacterized LOC106147303 NW_004955541 432802 433898 + 106147303 AGCD01071352;XR_001232137 MODEL 8884795 protein-coding Gjc1 gap junction protein gamma 1 ENCODES a protein that exhibits gap junction channel activity (ortholog); gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN AV node cell to bundle of His cell communication by electrical coupling (ortholog); cardiac muscle tissue development (ortholog); cell development (ortholog); PARTICIPATES IN connexin signaling pathway; ASSOCIATED WITH hypertension (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN connexin complex (ortholog); gap junction (ortholog); plasma membrane (ortholog) NW_004955451 17626859 17639002 - 102017942 AGCD01043764;GBDI01310484;XM_005394541;XM_005394542 XP_005394598;XP_005394599 MODEL 8940667 protein-coding LOC102003753 olfactory receptor 51L1-like NW_004955414 21288601 21289554 + 102003753 AGCD01015411;XM_005380082 XP_005380139 MODEL 8941448 protein-coding Lage3 L antigen family member 3 ASSOCIATED WITH Galloway-Mowat syndrome (ortholog); Galloway-Mowat syndrome 2 (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); EKC/KEOPS complex (ortholog); nuclear body (ortholog) NW_004955580 992190 993617 - 102004533 AGCD01075636;GBDJ01279132;XM_005414204 XP_005414261 MODEL 8928171 protein-coding Tbxas1 thromboxane A synthase 1 ENCODES a protein that exhibits 12-hydroxyheptadecatrienoic acid synthase activity (ortholog); heme binding (ortholog); hydroperoxy icosatetraenoate dehydratase activity (ortholog); INVOLVED IN icosanoid metabolic process (ortholog); intracellular chloride ion homeostasis (ortholog); positive regulation of vasoconstriction (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); alcohol-associated liver disease (ortholog); arteriosclerosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955494 3161032 3321974 - 102024020 AGCD01061467;AGCD01061468;AGCD01061469;AGCD01061470;GBCE01057155;XM_005405429;XM_005405430;XM_005405431;XM_013505026 XP_005405486;XP_005405487;XP_005405488;XP_013360480 MODEL 8921926 protein-coding Lrrc69 leucine rich repeat containing 69 ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955417 7875381 7969767 + 102015315 AGCD01018017;AGCD01018018;AGCD01018019;GBDF01082941;XM_005381774;XM_005381775;XM_005381776;XM_005381777 XP_005381831;XP_005381832;XP_005381833;XP_005381834 MODEL 8841659 protein-coding R3hdm2 R3H domain containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955458 4981967 5127409 - 102023559 AGCD01047446;AGCD01047447;AGCD01047448;AGCD01047449;AGCD01047450;AGCD01047451;AGCD01047452;AGCD01047453;AGCD01047454;AGCD01047455;AGCD01047456;GBDK01001499;XM_005397354;XM_005397356;XM_005397358;XM_013520852;XM_013520853;XM_013520854;XM_013520855;XM_013520856;XM_013520857;XM_013520858;XM_013520859;XM_013520860;XM_013520861;XM_013520862 XP_005397411;XP_005397413;XP_005397415;XP_013376306;XP_013376307;XP_013376308;XP_013376309;XP_013376310;XP_013376311;XP_013376312;XP_013376313;XP_013376314;XP_013376315;XP_013376316 MODEL 8755613 ncrna LOC102014057 uncharacterized LOC102014057 NW_004955421 26557253 26572498 - 102014057 AGCD01022267;GBDK01109655;XR_260831 MODEL 8813039 protein-coding LOC102020188 cytochrome P450 2B4-like NW_004955687 15738 39465 - 102020188 AGCD01078040;AGCD01078041;AGCD01078042;AGCD01078043;AGCD01078044;GBCQ01116514;XM_005415070;XM_013510179 XP_005415127;XP_013365633 MODEL 8786960 protein-coding Tex50 testis expressed 50 NW_004955406 13859967 13864308 + 102006539 AGCD01005954;GBDF01003776;XM_005374869;XM_005374870;XM_013520800 XP_005374926;XP_005374927;XP_013376254 MODEL 8840949 protein-coding LOC102019094 mammaglobin-A-like NW_004955511 6298385 6301018 - 102019094 AGCD01066600;XM_005408170 XP_005408227 MODEL 8699652 protein-coding Lig1 DNA ligase 1 ENCODES a protein that exhibits DNA ligase activity (ortholog); INVOLVED IN base-excision repair (ortholog); DNA repair (ortholog); DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Bloom syndrome (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955609 118442 160009 + 102008805 AGCD01077052;GBDF01051840;XM_005414919;XM_005414920;XM_005414923 XP_005414976;XP_005414977;XP_005414980 MODEL 8882801 protein-coding Slc6a5 solute carrier family 6 member 5 ENCODES a protein that exhibits glycine transmembrane transporter activity (ortholog); glycine:sodium symporter activity (ortholog); INVOLVED IN glycine import across plasma membrane (ortholog); glycine transport (ortholog); neurotransmitter reuptake (ortholog); ASSOCIATED WITH Apnea (ortholog); brain disease (ortholog); Cryopyrin-Associated Periodic Syndromes (ortholog); FOUND IN dense core granule (ortholog); endosome (ortholog); glycinergic synapse (ortholog) NW_004955476 1380869 1433005 + 102007333 AGCD01055205;GBDF01078637;XM_013502900 XP_013358354 MODEL 8880687 protein-coding LOC102015961 zinc finger protein 709-like NW_004955420 30097025 30113249 + 102015961 AGCD01021533;AGCD01021534;GBDI01091409;XM_005383585;XM_013513538 XP_005383642;XP_013368992 MODEL 8934393 protein-coding Supt3h SPT3 homolog, SAGA and STAGA complex component ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); SAGA complex (ortholog) NW_004955437 10207802 10649559 - 102028679 AGCD01034559;AGCD01034560;AGCD01034561;AGCD01034562;AGCD01034563;AGCD01034564;AGCD01034565;AGCD01034566;GBDF01226586;XM_005389836;XM_013516858;XM_013516859;XM_013516860;XM_013516861;XM_013516862;XM_013516863;XM_013516864;XM_013516865;XM_013516866;XM_013516867;XM_013516868;XM_013516869;XM_013516870;XM_013516871;XM_013516872;XM_013516873;XM_013516874;XM_013516875;XM_013516876;XM_013516877;XM_013516879;XM_013516880;XM_013516881;XM_013516882;XM_013516883;XR_001235061 XP_005389893;XP_013372312;XP_013372313;XP_013372314;XP_013372315;XP_013372316;XP_013372317;XP_013372318;XP_013372319;XP_013372320;XP_013372321;XP_013372322;XP_013372323;XP_013372324;XP_013372325;XP_013372326;XP_013372327;XP_013372328;XP_013372329;XP_013372330;XP_013372331;XP_013372333;XP_013372334;XP_013372335;XP_013372336;XP_013372337 MODEL 8721272 pseudo LOC102017894 protein FAM69B-like NW_004955425 7507821 7533856 + 102017894 AGCD01025387 MODEL 8995288 ncrna LOC102025217 uncharacterized LOC102025217 NW_004955409 3253468 3265102 - 102025217 AGCD01009237;GBDF01078183;XR_259747 MODEL 8860011 pseudo LOC102007795 zinc finger FYVE domain-containing protein 1 pseudogene NW_004955429 6957166 6968391 + 102007795 AGCD01028571;AGCD01028572 MODEL 730469416 scarna SCARNA8 Small Cajal body specific RNA 8 8744261 pseudo LOC102012540 ubiquitin carboxyl-terminal hydrolase 28 pseudogene NW_004955485 2178951 2183590 - 102012540 AGCD01058507;XM_005403918 MODEL 9033046 protein-coding LOC102010472 olfactory receptor 688 NW_004955414 21882234 21901979 + 102010472 AGCD01015436;XM_005380504 XP_005380561 MODEL 8740878 protein-coding Fgg fibrinogen gamma chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); cell-matrix adhesion (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH brain small vessel disease (ortholog); clear cell renal cell carcinoma (ortholog); congenital afibrinogenemia (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) NW_004955471 8786910 8794947 + 102008306 AGCD01053194;GBDF01040042;XM_005400931 XP_005400988 MODEL 9059837 protein-coding Kel Kell metallo-endopeptidase (Kell blood group) ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); intracellular magnesium ion homeostasis (ortholog); myelination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); hemolytic disease of the fetus (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955494 668188 688036 + 102029757 AGCD01061383;GBBH01229481;XM_005405376;XM_005405377;XM_005405378;XR_264099 XP_005405433;XP_005405434;XP_005405435 MODEL 8931274 protein-coding LOC102021280 serpin A11 NW_004955438 17885184 17897498 + 102021280 AGCD01035456;GBDJ01284370;XM_005390392 XP_005390449 MODEL 39133122 snrna U6 U6 spliceosomal RNA 8843711 protein-coding Nr2e3 nuclear receptor subfamily 2 group E member 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN eye photoreceptor cell development (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH cone-rod dystrophy (ortholog); enhanced S-cone syndrome (ortholog); enhanced S-cone syndrome 1 (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955450 5281707 5286260 - 102007486 AGCD01042499;GBDK01207728;XM_005393631 XP_005393688 MODEL 8804625 protein-coding Sim1 SIM bHLH transcription factor 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); ureteric bud development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN nucleus (ortholog) NW_004955411 26173009 26256545 - 102025885 AGCD01012174;AGCD01012175;GBDK01307262;XM_005377811 XP_005377868 MODEL 8898820 protein-coding Lalba lactalbumin alpha ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); lactose synthase activity (ortholog); INVOLVED IN lactose biosynthetic process (ortholog); PARTICIPATES IN Glut1 deficiency syndrome pathway; lactose biosynthetic pathway; ASSOCIATED WITH colon cancer (ortholog); gastroenteritis (ortholog); FOUND IN protein-containing complex (ortholog) NW_004955500 7487603 7489573 - 102030331 AGCD01063927;GBDF01138326;XM_005406651 XP_005406708 MODEL 39132745 snrna U6 U6 spliceosomal RNA 8959319 protein-coding Il17f interleukin 17F ENCODES a protein that exhibits cytokine activity (ortholog); cytokine binding (ortholog); cytokine receptor binding (ortholog); INVOLVED IN cartilage development (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); allergic asthma (ortholog); allergic rhinitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955411 5852767 5859208 + 102013268 AGCD01011664;XM_013510734 XP_013366188 MODEL 8898335 protein-coding CUNH8orf82 chromosome unknown C8orf82 homolog ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); thymoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955454 3150021 3153602 - 102015601 AGCD01045057;GBCB01059809;XM_005395922;XR_001236225;XR_001236226 XP_005395979 MODEL 8832472 protein-coding Xcl1 X-C motif chemokine ligand 1 ENCODES a protein that exhibits chemokine activity (ortholog); chemokine receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell-cell signaling (ortholog); cellular response to interleukin-4 (ortholog); ASSOCIATED WITH anti-basement membrane glomerulonephritis (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955462 8594416 8598101 - 102017550 AGCD01049322;GBDJ01337507;XM_005398206 XP_005398263 MODEL 8894119 protein-coding Tulp3 TUB like protein 3 ENCODES a protein that exhibits enzyme binding (ortholog); G protein-coupled receptor binding (ortholog); intraciliary transport particle A binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone development (ortholog); brain development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); axoneme (ortholog); ciliary base (ortholog) NW_004955429 18424912 18484522 + 102025605 AGCD01028906;AGCD01028907;AGCD01028908;AGCD01028909;AGCD01028910;AGCD01028911;AGCD01028912;GBDJ01235660;XM_013515477;XM_013515478 XP_013370931;XP_013370932 MODEL 9000332 ncrna LOC102018711 uncharacterized LOC102018711 NW_004955469 11293500 11308124 + 102018711 AGCD01052559;AGCD01052560;GBDF01306362;XR_263452 MODEL 8743533 protein-coding Evx1 even-skipped homeobox 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryo development ending in birth or egg hatching (ortholog); interneuron migration (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN axon (ortholog); cell body (ortholog) NW_004955410 28939416 28942751 + 102007748 AGCD01011267;XM_005377464 XP_005377521 MODEL 8916622 protein-coding LOC102014065 guanylate-binding protein 4-like NW_004955423 5188894 5203238 + 102014065 AGCD01023556;GBDI01220545;XM_005385105;XM_005385106 XP_005385162;XP_005385163 MODEL 8949656 protein-coding Tex52 testis expressed 52 NW_004955429 18376196 18391717 - 102022314 AGCD01028900;GBBH01116653;XM_005387117;XM_005387118;XM_013515472 XP_005387174;XP_005387175;XP_013370926 MODEL 8939279 protein-coding Gba1 glucosylceramidase beta 1 ENCODES a protein that exhibits beta-glucosidase activity (ortholog); glucosylceramidase activity (ortholog); glucosyltransferase activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); autophagosome organization (ortholog); autophagy (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH Addison's disease (ortholog); Anorexia (ortholog); brain disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955545 1682097 1689373 - 102029796 AGCD01071867;GBDJ01186339;XM_005411586 XP_005411643 MODEL 39132203 snrna U6 U6 spliceosomal RNA 9000818 pseudo LOC102009312 60S ribosomal protein L17 pseudogene NW_004955434 13427369 13427899 + 102009312 AGCD01032402 MODEL 39132892 snrna U6 U6 spliceosomal RNA 8794980 protein-coding Gjc2 gap junction protein gamma 2 ENCODES a protein that exhibits gap junction channel activity (ortholog); gap junction channel activity involved in cell communication by electrical coupling (ortholog); INVOLVED IN cell communication by electrical coupling (ortholog); cell-cell signaling (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Arachnodactyly (ortholog); Ataxia (ortholog); FOUND IN gap junction (ortholog); myelin sheath (ortholog); neuronal cell body (ortholog) NW_004955581 291537 294752 - 102022760 AGCD01075665;AGCD01075666;XM_013509723 XP_013365177 MODEL 9030562 protein-coding Taf5 TATA-box binding protein associated factor 5 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN DNA-templated transcription initiation (ortholog); mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955485 7159199 7176269 - 102014455 AGCD01058638;AGCD01058639;GBDF01127903;XM_013504089 XP_013359543 MODEL 8759777 protein-coding Dusp15 dual specificity phosphatase 15 ENCODES a protein that exhibits phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); regulation of oligodendrocyte differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog) NW_004955422 29109901 29119829 + 102013427 AGCD01023379;GBDF01007156;XM_005384884 XP_005384941 MODEL 8935287 pseudo LOC102009717 cyclin-C-like NW_004955416 11195941 11196968 + 102009717 AGCD01017180;XR_260457 MODEL 8898858 protein-coding Tbxt T-box transcription factor T ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); bone morphogenesis (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 40 (ortholog); chordoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955439 15675680 15683542 + 102029557 AGCD01036006;AGCD01036007;GBBH01066777;GBBH01066779;XM_005390667;XM_005390668 XP_005390724;XP_005390725 MODEL 8939359 protein-coding LOC102004484 olfactory receptor 13D1 NW_004955419 21750870 21752319 - 102004484 AGCD01020283;GBDJ01341197;XM_005382786 XP_005382843 MODEL 39131335 protein-coding SMIM27 small integral membrane protein 27 8704724 protein-coding Tsnaxip1 translin associated factor X interacting protein 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955484 8868022 8889089 - 102024010 AGCD01058398;AGCD01058399;AGCD01058400;GBDK01187927;XM_005403624;XM_005403625;XM_013503887;XM_013503888 XP_005403681;XP_005403682;XP_013359341;XP_013359342 MODEL 8815736 protein-coding LOC102012892 uncharacterized LOC102012892 NW_004955526 2993975 3028797 + 102012892 AGCD01069325;AGCD01069326;XM_013507354 XP_013362808 MODEL 8702498 protein-coding Gsx1 GS homeobox 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN adenohypophysis development (ortholog); hypothalamus development (ortholog); neuron fate commitment (ortholog) NW_004955497 7167915 7169177 + 102015741 AGCD01062660;XM_005406377 XP_005406434 MODEL 8964609 pseudo LOC102005201 phosphatase and actin regulator 4 pseudogene NW_004955591 755440 812129 - 102005201 AGCD01076284;AGCD01076285;AGCD01076286 MODEL 8712598 protein-coding Lrrc7 leucine rich repeat containing 7 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN clustering of voltage-gated calcium channels (ortholog); positive regulation of neuron projection development (ortholog); regulation of long-term synaptic depression (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); cocaine dependence (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN actin cytoskeleton (ortholog); axon initial segment (ortholog); cytoplasm (ortholog) NW_004955423 21764046 22269590 - 102009075 AGCD01023948;AGCD01023949;AGCD01023950;AGCD01023951;AGCD01023952;AGCD01023953;AGCD01023954;AGCD01023955;AGCD01023956;AGCD01023957;AGCD01023958;AGCD01023959;AGCD01023960;AGCD01023961;GBCE01048900;XM_013514395;XM_013514396;XM_013514397 XP_013369849;XP_013369850;XP_013369851 MODEL 8934237 protein-coding LOC102019103 uncharacterized LOC102019103 NW_004955528 1074125 1078875 - 102019103 AGCD01069550;GBDF01306990;XM_005409996;XR_001231983 XP_005410053 MODEL 8879320 ncrna LOC102003417 uncharacterized LOC102003417 NW_004955409 3940674 3968535 + 102003417 AGCD01009268;AGCD01009269;GBDF01016673;XR_259752 MODEL 10130735 pseudo LOC102015962 Ig heavy chain V-III region 23-like NW_004955487 127682 130180 - 102015962 AGCD01059207;AGCD01059208 MODEL 8768577 protein-coding LOC102018712 olfactory receptor 51F2 NW_004955414 20398735 20399715 + 102018712 AGCD01015371;XM_005380056 XP_005380113 MODEL 8742857 protein-coding Bmp3 bone morphogenetic protein 3 ENCODES a protein that exhibits BMP receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN negative regulation of ossification (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN extracellular region (ortholog); vesicle (ortholog) NW_004955433 5194312 5246125 + 102007805 AGCD01031492;AGCD01031493;GBCE01008766;XM_005388497 XP_005388554 MODEL 8976350 protein-coding Dlx6 distal-less homeobox 6 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); embryonic limb morphogenesis (ortholog); epithelial cell differentiation (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); split hand-foot malformation 1 (ortholog); Weissenbacher-Zweymuller syndrome (ortholog) NW_004955432 13415039 13420506 + 102020943 AGCD01031015;AGCD01031016;GBDJ01001146;XM_005388073;XR_001234676 XP_005388130 MODEL 8732875 ncrna LOC102007798 uncharacterized LOC102007798 NW_004955430 5482042 5492358 + 102007798 AGCD01029262;XR_261417 MODEL 9039182 protein-coding Kera keratocan INVOLVED IN cornea development in camera-type eye (ortholog); ASSOCIATED WITH arcus senilis (ortholog); cornea plana (ortholog); Cornea Plana 2 (ortholog) NW_004955405 28256054 28263559 - 102019353 AGCD01005234;GBCC01000239;XM_005374448;XM_013518226 XP_005374505;XP_013373680 MODEL 8865576 protein-coding Gba2 glucosylceramidase beta 2 ENCODES a protein that exhibits beta-glucosidase activity (ortholog); glucosylceramidase activity (ortholog); glucosyltransferase activity (ortholog); INVOLVED IN bile acid metabolic process (ortholog); central nervous system neuron development (ortholog); cholesterol metabolic process (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) NW_004955472 553556 564411 + 102009042 AGCD01053340;AGCD01053341;GBDI01186476;XM_005401007 XP_005401064 MODEL 9010573 ncrna LOC102021281 uncharacterized LOC102021281 NW_004955440 12437369 12460160 - 102021281 AGCD01036429;AGCD01036430;GBDF01158322;XR_001235233;XR_001235234;XR_262018 MODEL 8766488 protein-coding Sim2 SIM bHLH transcription factor 2 ENCODES a protein that exhibits DNA binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN embryonic pattern specification (ortholog); lung development (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cleft palate (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 35828250 35869067 + 102018159 AGCD01007752;AGCD01007753;GBCE01094132;GBCQ01175819;XM_013504633 XP_013360087 MODEL 39133613 snrna U4 U4 spliceosomal RNA 8990238 protein-coding LOC102020189 voltage-dependent P/Q-type calcium channel subunit alpha-1A-like NW_004955864 3995 10113 - 102020189 AGCD01078519;GBDJ01287614;XM_013510201 XP_013365655 MODEL 9003418 ncrna LOC102023063 uncharacterized LOC102023063 NW_004955432 1324294 1328134 - 102023063 AGCD01030592;GBDF01278395;XR_261499 MODEL 8740316 pseudo LOC102004485 40S ribosomal protein S14 pseudogene NW_004955484 6819345 6824612 + 102004485 AGCD01058294 MODEL 8714476 protein-coding Slc6a6 solute carrier family 6 member 6 ENCODES a protein that exhibits alanine transmembrane transporter activity (ortholog); amino acid transmembrane transporter activity (ortholog); amino acid:sodium symporter activity (ortholog); INVOLVED IN alanine transport (ortholog); amino acid import across plasma membrane (ortholog); gamma-aminobutyric acid import (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Anosmia (ortholog); cardiomyopathy (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); dendrite (ortholog) NW_004955429 17097753 17130079 + 102004955 AGCD01028845;AGCD01028846;GBBH01032840;XM_005387062;XM_005387064 XP_005387119;XP_005387121 MODEL 8972103 protein-coding Supt4h1 SPT4 homolog, DSIF elongation factor subunit ENCODES a protein that exhibits protein heterodimerization activity (ortholog); RNA polymerase inhibitor activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription, elongation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; FOUND IN DSIF complex (ortholog); nucleus (ortholog) NW_004955451 4682308 4688008 + 102027034 AGCD01043139;GBCQ01036422;XM_005394026;XM_005394027 XP_005394083;XP_005394084 MODEL 8827201 protein-coding Gsx2 GS homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN brain development (ortholog); central nervous system development (ortholog); forebrain dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Diencephalic-Mesencephalic Junction Dysplasia Syndrome 2 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955447 16714870 16715757 - 102010108 AGCD01041100;GBDF01241762;XM_013518492 XP_013373946 MODEL 8961019 protein-coding LOC102003754 olfactory receptor 2AG1-like NW_004955414 22578726 22579673 + 102003754 AGCD01015464;XM_005380177 XP_005380234 MODEL 8888068 protein-coding Sccpdh saccharopine dehydrogenase (putative) ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN lipid droplet (ortholog); midbody (ortholog); mitochondrion (ortholog) NW_004955406 9582429 9617936 + 102011502 AGCD01005828;AGCD01005829;GBCQ01062688;GBDF01007898;XM_005374793 XP_005374850 MODEL 8876819 protein-coding LOC102025218 leishmanolysin-like NW_004955409 37199857 37203329 + 102025218 AGCD01010498;GBDF01254756;XM_005377093;XM_005377094 XP_005377150;XP_005377151 MODEL 8826602 protein-coding LOC102010478 translation initiation factor IF-2-like NW_004955415 26656571 26658785 + 102010478 AGCD01016602;GBDF01082702;XM_013512111 XP_013367565 MODEL 39132205 snrna U6 U6 spliceosomal RNA 39132894 snrna U6 U6 spliceosomal RNA 8926776 protein-coding Fggy FGGY carbohydrate kinase domain containing ENCODES a protein that exhibits D-ribulokinase activity (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); neuron cellular homeostasis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955464 188037 683230 - 102013064 AGCD01049928;AGCD01049929;AGCD01049930;AGCD01049931;AGCD01049932;AGCD01049933;AGCD01049934;AGCD01049935;AGCD01049936;AGCD01049937;AGCD01049938;AGCD01049939;AGCD01049940;AGCD01049941;GBBH01150983;XM_005398479;XM_005398481;XM_013521724;XM_013521725;XM_013521726;XM_013521727;XM_013521728;XM_013521729;XM_013521730;XM_013521731 XP_005398536;XP_005398538;XP_013377178;XP_013377179;XP_013377180;XP_013377181;XP_013377182;XP_013377183;XP_013377184;XP_013377185 MODEL 39133123 snrna U6 U6 spliceosomal RNA 8865238 ncrna LOC102022020 uncharacterized LOC102022020 NW_004955440 13712668 13726570 + 102022020 AGCD01036452;GBDF01045531;XR_262020;XR_262021 MODEL 9041304 protein-coding R3hdm4 R3H domain containing 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog) NW_004955495 6926619 6936128 + 102018508 AGCD01062103;AGCD01062104;GBDJ01079366;GBDK01218961;XM_013505107 XP_013360561 MODEL 39131324 protein-coding GJC3 gap junction protein gamma 3 8979899 protein-coding CUNH8orf88 chromosome unknown C8orf88 homolog NW_004955417 7738254 7758867 - 102012962 AGCD01018014;GBDF01002053;XM_005381767;XM_013512853 XP_005381824;XP_013368307 MODEL 9014651 ncrna LOC102009719 uncharacterized LOC102009719 NW_004955482 6560784 6566698 + 102009719 AGCD01057403;GBDF01126264;XR_001230965 MODEL 8945473 protein-coding Il17ra interleukin 17 receptor A ENCODES a protein that exhibits interleukin-17 receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); defense response to fungus (ortholog); fibroblast activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955454 5230384 5252769 + 102028716 AGCD01045136;GBBH01142826;GBDK01129636;XM_005395965;XM_013520213;XM_013520214;XM_013520215 XP_005396022;XP_013375667;XP_013375668;XP_013375669 MODEL 8869393 protein-coding Tnfsf8 TNF superfamily member 8 INVOLVED IN CD8-positive, alpha-beta T cell differentiation (ortholog); defense response to Gram-positive bacterium (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog) NW_004955419 12763343 12790044 + 102006461 AGCD01019984;GBDF01227732;XM_005382620 XP_005382677 MODEL 8895275 protein-coding Lig3 DNA ligase 3 ENCODES a protein that exhibits DNA ligase (ATP) activity (ortholog); DNA ligase activity (ortholog); INVOLVED IN base-excision repair (ortholog); double-strand break repair (ortholog); double-strand break repair via alternative nonhomologous end joining (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alacrima (ortholog); anhidrosis (ortholog); FOUND IN condensed nuclear chromosome (ortholog); DNA ligase III-XRCC1 complex (ortholog); mitochondrion (ortholog) NW_004955481 9696050 9716154 + 102006246 AGCD01057112;GBCB01039491;GBDF01007194;XM_013503401 XP_013358855 MODEL 8861721 pseudo LOC102017895 protein kinase C iota type pseudogene NW_004955501 2865479 2868071 - 102017895 AGCD01064096 MODEL 8728391 protein-coding Sack1c scaffolding CK1 anchoring protein C ENCODES a protein that exhibits protein kinase binding (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung squamous cell carcinoma (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955422 26106053 26112548 + 102013731 AGCD01023275;GBBH01014061;XM_005384800 XP_005384857 MODEL 8886272 ncrna LOC102005202 uncharacterized LOC102005202 NW_004955599 391655 395193 + 102005202 AGCD01076643;AGCD01076644;GBCB01040783;XR_001232557;XR_001232558 MODEL 9057948 ncrna LOC102012541 uncharacterized LOC102012541 NW_004955420 22215125 22224734 - 102012541 AGCD01021189;GBDJ01422894;XR_260735 MODEL 8947013 ncrna LOC102014067 uncharacterized LOC102014067 NW_004955425 2457947 2463823 + 102014067 AGCD01025263;GBDF01147077;XR_261121 MODEL 39132746 snrna U6 U6 spliceosomal RNA 8811588 protein-coding Nr2f1 nuclear receptor subfamily 2 group F member 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); retinoic acid-responsive element binding (ortholog); INVOLVED IN cerebral cortex regionalization (ortholog); forebrain development (ortholog); negative regulation of neuron projection development (ortholog); ASSOCIATED WITH Arachnodactyly (ortholog); autism spectrum disorder (ortholog); Bosch-Boonstra-Schaaf optic atrophy syndrome (ortholog); FOUND IN nucleus (ortholog) NW_004955418 18615548 18622984 - 102022499 AGCD01019175;AGCD01019176;GBCE01053967;XM_005382270 XP_005382327 MODEL 9006379 protein-coding Taf5l TATA-box binding protein associated factor 5 like ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); regulation of somatic stem cell population maintenance (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); SAGA complex (ortholog) NW_004955492 8478147 8515988 + 102014793 AGCD01060812;AGCD01060813;AGCD01060814;AGCD01060815;AGCD01060816;GBBH01057779;XM_005405001;XM_005405002;XM_005405003;XM_013504717;XM_013504718 XP_005405058;XP_005405059;XP_005405060;XP_013360171;XP_013360172 MODEL 8886566 protein-coding Dusp16 dual specificity phosphatase 16 ENCODES a protein that exhibits JUN kinase binding (ortholog); mitogen-activated protein kinase binding (ortholog); mitogen-activated protein kinase p38 binding (ortholog); INVOLVED IN negative regulation of MAPK cascade (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 9404259 9481061 - 102016904 AGCD01013903;AGCD01013904;AGCD01013905;AGCD01013906;GBDF01088602;XM_013511422;XM_013511423;XM_013511424;XM_013511425 XP_013366876;XP_013366877;XP_013366878;XP_013366879 MODEL 9014005 protein-coding Xg Xg glycoprotein (Xg blood group) ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955499 1654037 1684150 + 102010921 AGCD01063377;AGCD01063378;AGCD01063379;GBDI01371761;XM_013505593;XM_013505594;XM_013505596;XM_013505597 XP_013361047;XP_013361048;XP_013361050;XP_013361051 MODEL 8874671 protein-coding Lama1 laminin subunit alpha 1 ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); glycosphingolipid binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN branching involved in salivary gland morphogenesis (ortholog); cell surface receptor signaling pathway (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; syndecan signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN basement membrane (ortholog); cell-cell junction (ortholog); extracellular matrix (ortholog) NW_004955402 4281415 4397158 + 102013130 AGCD01000118;AGCD01000119;AGCD01000120;AGCD01000121;GBCQ01099096;XM_013517659 XP_013373113 MODEL 8849411 protein-coding Tspan1 tetraspanin 1 INVOLVED IN protein stabilization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2O (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955464 12089589 12095000 - 102024321 AGCD01050180;GBBH01003796;XM_005398688 XP_005398745 MODEL 8818667 protein-coding Tulp4 TUB like protein 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955439 3935422 4121780 - 102012805 AGCD01035694;AGCD01035695;AGCD01035696;AGCD01035697;AGCD01035698;AGCD01035699;AGCD01035700;AGCD01035701;AGCD01035702;AGCD01035703;GBCQ01179666;XM_005390522;XM_005390523;XM_005390525 XP_005390579;XP_005390580;XP_005390582 MODEL 8722929 ncrna LOC102021283 uncharacterized LOC102021283 NW_004955441 9505985 9509614 + 102021283 AGCD01037022;GBCB01131781;XR_262065 MODEL 8773973 protein-coding LOC102012894 A-kinase anchor protein 17B-like NW_004955534 648006 696921 + 102012894 AGCD01070461;AGCD01070462;AGCD01070463;AGCD01070464;AGCD01070465;AGCD01070466;AGCD01070467;GBBH01217459;XM_005410447;XM_005410448 XP_005410504;XP_005410505 MODEL 8977712 protein-coding Smim29 small integral membrane protein 29 ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955437 2486918 2489003 - 102015344 AGCD01034271;GBDJ01187266;XM_005389519;XM_013517077;XM_013517078;XM_013517079;XM_013517080;XM_013517081;XM_013517082;XM_013517083 XP_005389576;XP_013372531;XP_013372532;XP_013372533;XP_013372534;XP_013372535;XP_013372536;XP_013372537 MODEL 8800425 protein-coding Evx2 even-skipped homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN limb morphogenesis (ortholog); ASSOCIATED WITH Synpolydactyly 1 (ortholog) NW_004955403 20578813 20582409 + 102006198 AGCD01002167;AGCD01002168;XM_005373888 XP_005373945 MODEL 9041558 protein-coding Gjc3 gap junction protein gamma 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN myelination (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); sensorineural hearing loss (ortholog); FOUND IN myelin sheath (ortholog) NW_004955573 944440 951440 + 102005527 AGCD01075010;GBDI01039702;XM_005413763 XP_005413820 MODEL 8756554 protein-coding Lrrc70 leucine rich repeat containing 70 INVOLVED IN positive regulation of response to cytokine stimulus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955446 6088863 6090306 - 102024859 AGCD01040087;GBDI01277956;XM_005415354 XP_005415411 MODEL 10102468 ncrna LOC106147304 uncharacterized LOC106147304 NW_004955541 490713 494881 - 106147304 AGCD01071352;GBCQ01165879;XR_001232140 MODEL 8986693 pseudo LOC102003418 neuroplastin pseudogene NW_004955409 8959472 8960507 + 102003418 AGCD01009426 MODEL 8862927 ncrna LOC102004486 uncharacterized LOC102004486 NW_004955485 7084159 7094302 - 102004486 AGCD01058634;GBBH01225878;XR_001231087;XR_001231088;XR_263915 MODEL 8959157 pseudo LOC102005203 tetraspanin-3 pseudogene NW_004955402 42278428 42282472 + 102005203 AGCD01001038 MODEL 9003751 protein-coding LOC102003755 uncharacterized LOC102003755 NW_004955470 10483806 10485953 - 102003755 AGCD01052870;GBDF01294395;XM_005400841 XP_005400898 MODEL 730469376 misc_rna DLX6-AS1_1 Embryonic ventral forebrain RNA 1 conserved region 1 8737996 ncrna LOC102007799 uncharacterized LOC102007799 NW_004955431 12189719 12210492 + 102007799 AGCD01030254;GBDF01124095;XR_261466;XR_261467 MODEL 9045788 protein-coding Bmp4 bone morphogenetic protein 4 ENCODES a protein that exhibits BMP receptor binding (ortholog); chemoattractant activity (ortholog); co-receptor binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anatomical structure regression (ortholog); angiogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; glypican signaling pathway; ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); Acute Otitis Media (ortholog); Alzheimer's disease (ortholog); FOUND IN extracellular region (ortholog); vesicle (ortholog) NW_004955409 9432835 9439680 + 102005114 AGCD01009440;AGCD01009441;GBCQ01040326;XM_005376769;XM_005376770 XP_005376826;XP_005376827 MODEL 8980202 protein-coding Tc2n tandem C2 domains, nuclear ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955438 14012199 14047174 - 102020163 AGCD01035327;GBDI01295880;XM_005390306;XM_005390307;XM_013517247 XP_005390363;XP_005390364;XP_013372701 MODEL 8987364 protein-coding Gbe1 1,4-alpha-glucan branching enzyme 1 ENCODES a protein that exhibits 1,4-alpha-glucan branching enzyme activity (ortholog); carbohydrate binding (ortholog); INVOLVED IN glycogen biosynthetic process (ortholog); negative regulation of neuron apoptotic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen biosynthetic pathway; glycogen storage disease type III pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arthrogryposis, Impaired Intellectual Development, and Seizures (ortholog); asthma (ortholog); FOUND IN cytosol (ortholog) NW_004955407 10692082 10959236 + 102028159 AGCD01007085;AGCD01007086;AGCD01007087;AGCD01007088;AGCD01007089;AGCD01007090;AGCD01007091;AGCD01007092;GBDI01173668;XM_005375541 XP_005375598 MODEL 39133614 snrna U4 U4 spliceosomal RNA 9014656 protein-coding LOC102009720 olfactory receptor 2AJ1-like NW_004955418 30036459 30037427 - 102009720 AGCD01019499;XM_005382364 XP_005382421 MODEL 8742370 protein-coding LOC102020191 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2-like NW_004956420 3401 4413 - 102020191 AGCD01079568;GBDI01258722;GBDK01028378;XM_013510226 XP_013365680 MODEL 39131509 protein-coding TEX52 testis expressed 52 8884648 protein-coding Simc1 SUMO interacting motifs containing 1 ENCODES a protein that exhibits peptidase inhibitor activity (ortholog); SUMO polymer binding (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); PML body (ortholog) NW_004955408 28562372 28630420 + 102009467 AGCD01008716;AGCD01008717;AGCD01008718;AGCD01008719;AGCD01008720;AGCD01008721;GBDF01002279;XM_005376371;XM_005376372 XP_005376428;XP_005376429 MODEL 8711088 protein-coding LOC102009319 HLA class II histocompatibility antigen, DRB1-1 beta chain-like NW_004955437 1228243 1262090 - 102009319 AGCD01034197;AGCD01034198;GBDK01061271;XM_013517040;XM_013517041 XP_013372494;XP_013372495 MODEL 8855658 ncrna LOC102019105 uncharacterized LOC102019105 NW_004955436 21653886 21682147 + 102019105 AGCD01034066;AGCD01034067;AGCD01034068;GBDF01020993;XR_001234982;XR_001234983;XR_001234984 MODEL 8993613 protein-coding LOC102018714 serine/threonine-protein kinase 33-like NW_004955414 24256281 24303682 - 102018714 AGCD01015539;AGCD01015540;AGCD01015541;GBDI01261988;XM_013511741 XP_013367195 MODEL 8768556 protein-coding Slc6a7 solute carrier family 6 member 7 ENCODES a protein that exhibits L-proline transmembrane transporter activity (ortholog); proline:sodium symporter activity (ortholog); INVOLVED IN proline transmembrane transport (ortholog); proline transport (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); presynaptic membrane (ortholog); Schaffer collateral - CA1 synapse (ortholog) NW_004955415 4314090 4332659 - 102017863 AGCD01015968;GBDJ01406870;XM_005380583;XM_005380584 XP_005380640;XP_005380641 MODEL 8927771 protein-coding Gtf2a1 general transcription factor IIA subunit 1 ENCODES a protein that exhibits DNA binding (ortholog); protein heterodimerization activity (ortholog); RNA polymerase II core promoter sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); Dandy-Walker syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955438 4787190 4825578 - 102025726 AGCD01035048;AGCD01035049;GBDJ01348599;XM_005390236;XM_005390237;XM_013517226 XP_005390293;XP_005390294;XP_013372680 MODEL 8857531 protein-coding Sack1d scaffolding CK1 anchoring protein D ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH glioblastoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) NW_004955445 17837099 17861421 - 102007604 AGCD01039896;AGCD01039897;GBDI01089938;XM_005392523 XP_005392580 MODEL 8822192 pseudo LOC102025222 luc7-like protein 3 NW_004955411 35479981 35483380 - 102025222 AGCD01012433 MODEL 8892420 protein-coding Supt5h SPT5 homolog, DSIF elongation factor subunit ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription, elongation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription, elongation (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN DSIF complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955468 95997 123005 - 102020995 AGCD01051681;AGCD01051682;GBBH01060729;XM_005399768;XM_005399769;XM_005399770;XM_013522475 XP_005399825;XP_005399826;XP_005399827;XP_013377929 MODEL 39132209 snrna U6 U6 spliceosomal RNA 9038141 protein-coding Scd5 stearoyl-CoA desaturase 5 ENCODES a protein that exhibits oxidoreductase activity (ortholog); palmitoyl-CoA 9-desaturase activity (ortholog); stearoyl-CoA 9-desaturase activity (ortholog); INVOLVED IN monounsaturated fatty acid biosynthetic process (ortholog); unsaturated fatty acid biosynthetic process (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 79 (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955433 6700616 6819782 - 102008137 AGCD01031546;AGCD01031547;AGCD01031548;GBCE01104546;XM_005388247 XP_005388304 MODEL 39132896 snrna U6 U6 spliceosomal RNA 39133124 snrna U6 U6 spliceosomal RNA 8702607 protein-coding LOC102022022 olfactory receptor 4K2-like NW_004955550 506630 507583 - 102022022 AGCD01072509;XM_005412132 XP_005412189 MODEL 408395152 protein-coding SLC1A5 8734029 protein-coding Taf6 TATA-box binding protein associated factor 6 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); DNA binding (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN DNA-templated transcription initiation (ortholog); mRNA transcription by RNA polymerase II (ortholog); negative regulation of cell cycle (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Alazami-Yuan Syndrome (ortholog); Breast Cancer, Familial (ortholog); Cornelia de Lange syndrome 1 (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955573 752646 759292 + 102003074 AGCD01075004;GBDF01052297;XM_005413754;XM_005413755 XP_005413811;XP_005413812 MODEL 8928832 protein-coding LOC102023064 asparagine synthetase [glutamine-hydrolyzing] NW_004955432 14084222 14107610 - 102023064 AGCD01031036;GBBH01144818;GBCC01041400;XM_005388086 XP_005388143 MODEL 9046023 pseudo LOC102012900 probable G-protein coupled receptor 160 NW_004955440 2492344 2496582 - 102012900 AGCD01036208 MODEL 8974849 pseudo LOC102017897 mitochondrial import inner membrane translocase subunit Tim9-like NW_004955506 1117685 1117951 - 102017897 AGCD01065246 MODEL 8899021 protein-coding Kgd4 alpha-ketoglutarate dehydrogenase subunit 4 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); tricarboxylic acid cycle (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Leigh disease (ortholog); FOUND IN mitochondrion (ortholog); oxoglutarate dehydrogenase complex (ortholog) NW_004955446 38161 50167 + 102007381 AGCD01039921;AGCD01039922;GBCQ01034871;XM_005392589;XM_005392591 XP_005392646;XP_005392648 MODEL 8824290 pseudo LOC102020193 prefoldin subunit 4 pseudogene NW_004955403 39947439 39960187 + 102020193 AGCD01002652;XM_005373866 MODEL 9028476 protein-coding Lig4 DNA ligase 4 ENCODES a protein that exhibits AMP binding (ortholog); ATP binding (ortholog); DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cell population proliferation (ortholog); cellular response to ionizing radiation (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); colorectal cancer (ortholog); FOUND IN condensed chromosome (ortholog); DNA ligase IV complex (ortholog); DNA-dependent protein kinase-DNA ligase 4 complex (ortholog) NW_004955404 3606077 3615193 + 102024416 AGCD01003279;GBDF01038894;XM_005374013;XM_005374014;XM_013515840;XM_013515843;XM_013515847;XM_013515850 XP_005374070;XP_005374071;XP_013371294;XP_013371297;XP_013371301;XP_013371304 MODEL 8956321 protein-coding Ewsr1 EWS RNA binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); cervical cancer (ortholog); FOUND IN Cajal body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955455 3571025 3599975 + 102030274 AGCD01045636;GBDF01002227;XM_005396190;XM_005396191;XM_005396193 XP_005396247;XP_005396248;XP_005396250 MODEL 10171854 ncrna LOC106147305 uncharacterized LOC106147305 NW_004955541 663371 664630 + 106147305 AGCD01071356;XR_001232141 MODEL 8853605 pseudo LOC102014068 60S ribosomal protein L12-like NW_004955425 932011 934034 - 102014068 AGCD01025206 MODEL 8774521 ncrna LOC102010491 uncharacterized LOC102010491 NW_004955486 2457928 2464475 + 102010491 AGCD01058997;GBDF01144358;XR_263941 MODEL 8778609 protein-coding Fgl1 fibrinogen like 1 ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN adipose tissue development (ortholog); cholesterol metabolic process (ortholog); hepatocyte proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955552 1784046 1813935 + 102022233 AGCD01072787;AGCD01072788;GBDF01111290;XM_005412199 XP_005412256 MODEL 8848006 protein-coding LOC102005204 PRAME family member 12-like NW_004955608 68987 90514 - 102005204 AGCD01077000;XM_013510117 XP_013365571 MODEL 730469143 misc_rna DLX6-AS1_2 Embryonic ventral forebrain RNA 1 conserved region 2 39132747 snrna U6 U6 spliceosomal RNA 8737186 ncrna LOC102007802 uncharacterized LOC102007802 NW_004955433 6683298 6685871 - 102007802 AGCD01031546;GBDF01076212;XR_261563 MODEL 8724276 protein-coding Nr2f2 nuclear receptor subfamily 2 group F member 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); blood vessel morphogenesis (ortholog); female gonad development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH 46,XX sex reversal 5 (ortholog); Adrenal Insufficiency (ortholog); autistic disorder (ortholog); FOUND IN nucleus (ortholog) NW_004955416 24148052 24154406 + 102024224 AGCD01017563;GBDF01304567;GBDI01013703;XM_005381608 XP_005381665 MODEL 8744562 protein-coding Dusp18 dual specificity phosphatase 18 ENCODES a protein that exhibits phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN negative regulation of bone resorption (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial inner membrane (ortholog); nucleoplasm (ortholog) NW_004955455 4899090 4906785 - 102027487 AGCD01045704;AGCD01045705;GBBH01110550;XM_005396282;XM_005396283;XM_013520328 XP_005396339;XP_005396340;XP_013375782 MODEL 8866356 protein-coding Tnfsf9 TNF superfamily member 9 ENCODES a protein that exhibits signaling receptor binding (ortholog); tumor necrosis factor receptor superfamily binding (ortholog); INVOLVED IN myeloid dendritic cell differentiation (ortholog); positive regulation of activated T cell proliferation (ortholog); positive regulation of cytotoxic T cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); B-cell lymphoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog) NW_004955495 3101965 3107552 - 102009959 AGCD01061823;AGCD01061824;GBBH01023646;GBDF01260918;XM_013505037 XP_013360491 MODEL 8882628 protein-coding Il17rb interleukin 17 receptor B INVOLVED IN positive regulation of inflammatory response (ortholog); positive regulation of interleukin-13 production (ortholog); positive regulation of interleukin-5 production (ortholog); ASSOCIATED WITH asthma (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955430 3831665 3847366 + 102004410 AGCD01029228;AGCD01029229;GBCQ01129637;XM_005387375 XP_005387432 MODEL 8845470 protein-coding Tspan10 tetraspanin 10 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN establishment of protein localization to organelle (ortholog); protein maturation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955506 1442378 1448726 - 102003161 AGCD01065263;AGCD01065264;GBCE01121011;XM_005407269;XM_005407270 XP_005407326;XP_005407327 MODEL 8839973 protein-coding Lama2 laminin subunit alpha 2 INVOLVED IN axon guidance (ortholog); positive regulation of synaptic transmission, cholinergic (ortholog); Schwann cell differentiation (ortholog); ASSOCIATED WITH asthma (ortholog); Ataxia (ortholog); atrial heart septal defect (ortholog); FOUND IN basement membrane (ortholog); dendritic spine (ortholog); neuromuscular junction (ortholog) NW_004955436 9829777 10400101 + 102013645 AGCD01033770;AGCD01033771;AGCD01033772;AGCD01033773;AGCD01033774;AGCD01033775;AGCD01033776;AGCD01033777;AGCD01033778;AGCD01033779;AGCD01033780;AGCD01033781;GBCE01085149;XM_005389182;XM_005389183;XM_005389185;XM_005389186 XP_005389239;XP_005389240;XP_005389242;XP_005389243 MODEL 8875293 protein-coding Bmp5 bone morphogenetic protein 5 ENCODES a protein that exhibits BMP receptor binding (ortholog); INVOLVED IN allantois development (ortholog); anterior head development (ortholog); BMP signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrioventricular septal defect (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog); vesicle (ortholog) NW_004955411 450674 557213 + 102003741 AGCD01011458;AGCD01011459;AGCD01011460;AGCD01011461;GBCE01076623;XM_005377586;XM_013510909 XP_005377643;XP_013366363 MODEL 8940998 protein-coding Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN cell activation involved in immune response (ortholog); COPI coating of Golgi vesicle (ortholog); Golgi to endosome transport (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cataract 11 multiple types (ortholog); FOUND IN cell leading edge (ortholog); cis-Golgi network (ortholog); cytoplasm (ortholog) NW_004955485 8006161 8126074 - 102018732 AGCD01058688;AGCD01058689;AGCD01058690;GBCB01020289;XM_005403846;XM_005403847;XM_005403848;XM_005403849;XM_005403850;XM_005403851 XP_005403903;XP_005403904;XP_005403905;XP_005403906;XP_005403907;XP_005403908 MODEL 8994981 protein-coding Smim3 small integral membrane protein 3 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog) NW_004955415 3789462 3817117 - 102011760 AGCD01015952;AGCD01015953;GBCE01152699;XM_005380563;XM_013512224;XM_013512225;XM_013512226 XP_005380620;XP_013367678;XP_013367679;XP_013367680 MODEL 8935810 protein-coding Lrrc71 leucine rich repeat containing 71 ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955545 2977829 2988520 + 102015350 AGCD01071930;GBDI01070693;XM_005411725;XM_005411726;XM_005411729;XM_005411730;XM_005411731;XM_013508285;XM_013508287;XM_013508288;XM_013508289;XM_013508290 XP_005411782;XP_005411783;XP_005411786;XP_005411787;XP_005411788;XP_013363739;XP_013363741;XP_013363742;XP_013363743;XP_013363744 MODEL 8766398 protein-coding Tex55 testis expressed 55 ASSOCIATED WITH uterine carcinosarcoma (ortholog); FOUND IN nucleus (ortholog); sperm flagellum (ortholog) NW_004955427 18905578 18929842 + 102014588 AGCD01027354;AGCD01027355;AGCD01027356;GBDF01049904;XM_005386429;XM_005386430;XM_005386431;XM_005386432;XM_005386433 XP_005386486;XP_005386487;XP_005386488;XP_005386489;XP_005386490 MODEL 8978234 ncrna LOC102004490 uncharacterized LOC102004490 NW_004955421 23169752 23183018 + 102004490 AGCD01022173;GBDF01042502;XR_260816 MODEL 10189816 protein-coding CUNH8orf89 chromosome unknown C8orf89 homolog ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955444 6918632 6954551 + 106149348 AGCD01038879;AGCD01038880;AGCD01038881;AGCD01038882;AGCD01038883;GBBH01016223;GBDI01028034;XM_013518128;XM_013518129;XM_013518130 XP_013373582;XP_013373583;XP_013373584 MODEL 8801982 protein-coding LOC102003756 olfactory receptor 52E8-like NW_004955414 21787675 21788613 + 102003756 AGCD01015432;XM_005380430 XP_005380487 MODEL 8917411 protein-coding Sack1e scaffolding CK1 anchoring protein E ENCODES a protein that exhibits protein kinase binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955559 1933345 1942707 + 102009231 AGCD01073682;GBBH01186442;XM_005412949;XM_013509066 XP_005413006;XP_013364520 MODEL 8993522 protein-coding Lim2 lens intrinsic membrane protein 2 INVOLVED IN camera-type eye development (ortholog); lens development in camera-type eye (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); cataract (ortholog); cataract 19 multiple types (ortholog); FOUND IN vesicle (ortholog) NW_004955558 1019709 1024375 + 102012809 AGCD01073411;GBDK01111107;XM_013508909 XP_013364363 MODEL 9061217 protein-coding Xiap X-linked inhibitor of apoptosis ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); defense response to bacterium (ortholog); DNA damage response (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; intrinsic apoptotic pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955473 10823795 10878256 - 102029504 AGCD01054116;AGCD01054117;GBBH01094341;GBCE01183072;XM_013523059 XP_013378513 MODEL 8791496 protein-coding Supt6h SPT6 homolog, histone chaperone and transcription elongation factor ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN blastocyst formation (ortholog); regulation of isotype switching (ortholog); regulation of muscle cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955481 4462270 4497364 - 102027977 AGCD01056942;GBBH01092331;XM_005402740;XM_013503386;XM_013503387;XM_013503388;XM_013503389;XM_013503390;XM_013503391 XP_005402797;XP_013358840;XP_013358841;XP_013358842;XP_013358843;XP_013358844;XP_013358845 MODEL 8862284 protein-coding LOC102010492 zinc finger protein 660 NW_004955420 26897949 26926759 - 102010492 AGCD01021435;GBDF01039917;XM_005383479;XM_013513416;XM_013513417;XM_013513418;XM_013513419;XM_013513420;XM_013513421;XM_013513422;XM_013513423 XP_005383536;XP_013368870;XP_013368871;XP_013368872;XP_013368873;XP_013368874;XP_013368875;XP_013368876;XP_013368877 MODEL 40834592 protein-coding TUNAR transmembrane neural differentiation associated intracellular calcium regulator 8732450 pseudo LOC102021286 methylosome subunit pICln pseudogene NW_004955559 1489054 1489989 + 102021286 AGCD01073647;XM_005412899 MODEL 39133615 snrna U4 U4 spliceosomal RNA 8779513 ncrna LOC102022028 uncharacterized LOC102022028 NW_004955444 6714099 6722009 - 102022028 AGCD01038874;GBBH01224885;XR_262244 MODEL 8916617 ncrna LOC102012543 uncharacterized LOC102012543 NW_004955421 4876441 4882855 + 102012543 AGCD01021704;GBCQ01090963;XR_001233851 MODEL 8728718 protein-coding Gjd2 gap junction protein delta 2 INVOLVED IN action potential (ortholog); cell-cell signaling (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH Brain Hypoxia (ortholog); myopia (ortholog); refractive error (ortholog); FOUND IN gap junction (ortholog) NW_004955416 2104985 2134937 - 102003866 AGCD01016848;AGCD01016849;XM_005381685 XP_005381742 MODEL 8924299 protein-coding Sin3a SIN3 transcription regulator family member A ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); cellular response to dopamine (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN DNA modification pathway; Hedgehog signaling pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); APLASIA/HYPOPLASIA INVOLVING BONES OF THE LOWER LIMBS (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN chromatin (ortholog); histone deacetylase complex (ortholog); kinetochore (ortholog) NW_004955450 2804551 2870450 + 102027592 AGCD01042407;AGCD01042408;AGCD01042409;AGCD01042410;GBDI01010558;XM_005393507;XM_013518961 XP_005393564;XP_013374415 MODEL 8898897 pseudo LOC102003422 40S ribosomal protein S6 pseudogene NW_004955411 36312248 36313022 - 102003422 AGCD01012470 MODEL 8833038 protein-coding LOC102012901 general transcription factor 3C polypeptide 6-like NW_004955441 6322077 6323436 - 102012901 AGCD01036912;XM_013517515 XP_013372969 MODEL 9063251 pseudo LOC102019109 mortality factor 4-like protein 1 pseudogene NW_004955439 2501307 2503035 - 102019109 AGCD01035651 MODEL 8878648 protein-coding LOC102009721 chromosome unknown open reading frame, human C6orf62 ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colon adenocarcinoma (ortholog) NW_004955483 2346246 2358156 + 102009721 AGCD01057674;AGCD01057675;GBDF01209925;XM_005403364;XM_005403365 XP_005403421;XP_005403422 MODEL 8977920 ncrna LOC102020195 uncharacterized LOC102020195 NW_004955405 35941436 35942684 - 102020195 AGCD01005405;GBDK01097372;XR_259433 MODEL 8979961 protein-coding Slc6a8 solute carrier family 6 member 8 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); creatine transmembrane transporter activity (ortholog); creatine:sodium symporter activity (ortholog); INVOLVED IN creatine transmembrane transport (ortholog); embryonic brain development (ortholog); protein catabolic process (ortholog); PARTICIPATES IN creatine metabolic pathway; ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); cardiomyopathy (ortholog); FOUND IN apical plasma membrane (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955580 419696 426727 + 102013885 AGCD01075606;GBCB01006312;GBDI01117556;XM_005414132 XP_005414189 MODEL 8875763 protein-coding LOC102017899 uncharacterized LOC102017899 NW_004955508 4019743 4057039 - 102017899 AGCD01065855;AGCD01065856;AGCD01065857;AGCD01065858;AGCD01065859;AGCD01065860;GBBH01063497;GBDJ01031312;XM_005407755 XP_005407812 MODEL 8826063 protein-coding R3hdml R3H domain containing like ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955445 12991667 13004174 - 102018663 AGCD01039766;GBCQ01049962;XM_005392473 XP_005392530 MODEL 8717640 protein-coding LOC102025226 olfactory receptor 1468-like NW_004955467 13332532 13333473 + 102025226 AGCD01051671;XM_005399734 XP_005399791 MODEL 39132210 snrna U6 U6 spliceosomal RNA 39133125 snrna U6 U6 spliceosomal RNA 9002451 pseudo LOC102015963 U6 snRNA-associated Sm-like protein LSm8 pseudogene NW_004955422 11656699 11657139 + 102015963 AGCD01022765 MODEL 8841928 protein-coding Slc1a5 solute carrier family 1 member 5 ENCODES a protein that exhibits antiporter activity (ortholog); L-aspartate transmembrane transporter activity (ortholog); L-glutamine transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); L-aspartate import across plasma membrane (ortholog); L-glutamine import across plasma membrane (ortholog); PARTICIPATES IN argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; citrullinemia pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN basal plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955574 798004 806631 - 102030015 AGCD01075130;GBDF01209889;XM_013509576 XP_013365030 MODEL 39132748 snrna U6 U6 spliceosomal RNA 8913595 pseudo LOC102018717 cullin-2 pseudogene NW_004955472 6363888 6365161 - 102018717 AGCD01053598 MODEL 8912896 protein-coding Dusp19 dual specificity phosphatase 19 ENCODES a protein that exhibits JUN kinase phosphatase activity (ortholog); MAP kinase scaffold activity (ortholog); mitogen-activated protein kinase kinase binding (ortholog); INVOLVED IN JNK cascade (ortholog); negative regulation of JNK cascade (ortholog); negative regulation of MAPK cascade (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955403 14421057 14439829 - 102016010 AGCD01081636;GBDK01039617;XM_005373344 XP_005373401 MODEL 8727798 protein-coding Taf6l TATA-box binding protein associated factor 6 like ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); regulation of somatic stem cell population maintenance (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); SAGA complex (ortholog) NW_004955599 453275 461571 - 102020863 AGCD01076649;AGCD01076650;GBCB01057066;GBDF01163264;XM_013510041 XP_013365495 MODEL 8731686 protein-coding Tnik TRAF2 and NCK interacting kinase ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cytoskeleton organization (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); autosomal recessive intellectual developmental disorder 54 (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) NW_004955420 1166340 1542712 - 102022926 AGCD01020569;AGCD01020570;AGCD01020571;AGCD01020572;AGCD01020573;AGCD01020574;GBDI01026985;XM_005382987;XM_005382988;XM_005382989;XM_005382990 XP_005383044;XP_005383045;XP_005383046;XP_005383047 MODEL 8875574 protein-coding Il17rc interleukin 17 receptor C ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-17 receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN defense response to fungus (ortholog); granulocyte chemotaxis (ortholog); interleukin-17A-mediated signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Candidiasis, Familial, 9 (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955561 1410100 1423041 + 102010952 AGCD01073855;GBCB01095866;XM_005413040;XM_005413041;XM_005413042;XM_005413044;XM_013509087;XM_013509088 XP_005413097;XP_005413098;XP_005413099;XP_005413101;XP_013364541;XP_013364542 MODEL 8853528 protein-coding Khdc4 KH domain containing 4, pre-mRNA splicing factor ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splice site recognition (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955545 2100440 2120412 - 102012806 AGCD01071884;AGCD01071885;GBDF01049228;XM_005411624;XM_005411625;XM_005411626 XP_005411681;XP_005411682;XP_005411683 MODEL 8821532 protein-coding Lama3 laminin subunit alpha 3 INVOLVED IN cell-cell adhesion (ortholog); endodermal cell differentiation (ortholog); hemidesmosome assembly (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN adherens junction (ortholog); basement membrane (ortholog); extracellular matrix (ortholog) NW_004955402 11980980 12362143 + 102020507 AGCD01000335;AGCD01000336;AGCD01000337;AGCD01000338;AGCD01000339;AGCD01000340;AGCD01000341;AGCD01000342;AGCD01000343;AGCD01000344;AGCD01000345;AGCD01000346;AGCD01000347;AGCD01000348;AGCD01000349;AGCD01000350;AGCD01000351;AGCD01000352;AGCD01000353;AGCD01000354;AGCD01000355;AGCD01000356;AGCD01000357;AGCD01000358;AGCD01000359;AGCD01000360;AGCD01000361;AGCD01000362;AGCD01000363;AGCD01000364;AGCD01000365;AGCD01000366;AGCD01000367;AGCD01000368;AGCD01000369;AGCD01000370;AGCD01000371;AGCD01000372;AGCD01000373;AGCD01000374;AGCD01000375;AGCD01000376;AGCD01000377;AGCD01000378;AGCD01000379;AGCD01000380;AGCD01000381;AGCD01000382;AGCD01000383;AGCD01000384;AGCD01000385;AGCD01000386;AGCD01000387;AGCD01000388;AGCD01000389;GBDJ01229317;GBDJ01229318;XM_013504299 XP_013359753 MODEL 39132898 snrna U6 U6 spliceosomal RNA 8973475 protein-coding Gtf2a1l general transcription factor IIA subunit 1 like INVOLVED IN cognition (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955441 15142906 15193089 + 102022021 AGCD01037242;AGCD01037243;AGCD01037244;GBDF01003920;XM_005391004;XM_005391005;XM_005391006 XP_005391061;XP_005391062;XP_005391063 MODEL 10179918 protein-coding LOC106147306 uncharacterized LOC106147306 NW_004955408 1848310 1852064 - 106147306 AGCD01007977;GBDK01269572;XM_013508005 XP_013363459 MODEL 8722000 protein-coding LOC102019110 natural resistance-associated macrophage protein 2-like NW_004955547 1413554 1447203 - 102019110 AGCD01072222;AGCD01072223;GBDJ01084229;XM_013508457 XP_013363911 MODEL 8791169 protein-coding Scel sciellin INVOLVED IN embryo development ending in birth or egg hatching (ortholog); epidermis development (ortholog); keratinocyte differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955404 29619710 29727873 - 102016555 AGCD01003980;AGCD01003981;AGCD01003982;AGCD01003983;AGCD01003984;GBDK01116262;XM_005374153;XM_005374155;XM_005374156;XM_005374157;XM_013516400;XM_013516404;XM_013516405;XM_013516410 XP_005374210;XP_005374212;XP_005374213;XP_005374214;XP_013371854;XP_013371858;XP_013371859;XP_013371864 MODEL 9015491 protein-coding Tcaf1 TRPM8 channel associated factor 1 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); positive regulation of protein targeting to membrane (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955491 178187 220993 - 102030640 AGCD01060324;GBBH01208254;XM_005404717;XM_005404718;XM_005404719;XM_013504653 XP_005404774;XP_005404775;XP_005404776;XP_013360107 MODEL 8842099 protein-coding LOC102003757 olfactory receptor 11L1-like NW_004955473 3769632 3770567 + 102003757 AGCD01053938;XM_005401224 XP_005401281 MODEL 8838703 protein-coding Nr2f6 nuclear receptor subfamily 2 group F member 6 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN detection of temperature stimulus involved in sensory perception of pain (ortholog); entrainment of circadian clock by photoperiod (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); endometriosis (ortholog); FOUND IN mitochondrion (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955524 961232 965012 + 102028458 AGCD01068731;AGCD01068732;GBCE01030882;GBCQ01005503;XM_013507252 XP_013362706 MODEL 9041603 protein-coding Sack1f scaffolding CK1 anchoring protein F ASSOCIATED WITH oligospermia (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 25775107 25807592 + 102006999 AGCD01014414;GBDF01112276;XM_005379307 XP_005379364 MODEL 8811189 protein-coding Slc6a9 solute carrier family 6 member 9 ENCODES a protein that exhibits glycine transmembrane transporter activity (ortholog); glycine:sodium symporter activity (ortholog); INVOLVED IN glycine import across plasma membrane (ortholog); glycine secretion, neurotransmission (ortholog); glycine transport (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); Edema (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955537 3520516 3549492 - 102009543 AGCD01070960;AGCD01070961;GBCE01066064;XM_005410695;XM_005410696;XM_005410698;XM_005410699;XM_005410700;XM_005410702;XM_005410704;XM_005410705;XM_013507775;XM_013507776;XM_013507777;XM_013507778;XM_013507779 XP_005410752;XP_005410753;XP_005410755;XP_005410756;XP_005410757;XP_005410759;XP_005410761;XP_005410762;XP_013363229;XP_013363230;XP_013363231;XP_013363232;XP_013363233 MODEL 8829083 pseudo LOC102023072 leucine-rich repeat transmembrane protein FLRT1-like NW_004955436 799748 800600 + 102023072 AGCD01033559 MODEL 8961531 ncrna LOC102022029 uncharacterized LOC102022029 NW_004955444 13751675 13756534 + 102022029 AGCD01039108;GBCQ01182547;XR_262269 MODEL 9055836 protein-coding Bmp6 bone morphogenetic protein 6 ENCODES a protein that exhibits BMP receptor binding (ortholog); cytokine activity (ortholog); growth factor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); bone development (ortholog); cell differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); adult T-cell leukemia/lymphoma (ortholog); allergic contact dermatitis (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog); vesicle (ortholog) NW_004955465 6053600 6201254 - 102020895 AGCD01050437;AGCD01050438;GBCE01031404;GBCQ01095928;XM_013521839 XP_013377293 MODEL 39131372 protein-coding SMIM30 small integral membrane protein 30 8889235 protein-coding Lrrc72 leucine rich repeat containing 72 ASSOCIATED WITH colon adenocarcinoma (ortholog) NW_004955410 19714223 19774630 + 102022368 AGCD01011030;GBDF01004934;XM_005377335 XP_005377392 MODEL 9009767 pseudo LOC102012546 ribosome biogenesis protein NSA2 homolog pseudogene NW_004955492 272333 273124 + 102012546 AGCD01060632 MODEL 8892055 protein-coding Exd1 exonuclease 3'-5' domain containing 1 INVOLVED IN piRNA processing (ortholog); regulatory ncRNA-mediated gene silencing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); melanoma (ortholog); FOUND IN PET complex (ortholog) NW_004955416 8032189 8089903 - 102004701 AGCD01017024;AGCD01017025;AGCD01017026;AGCD01017027;AGCD01017028;GBCQ01032561;GBDI01232396;XM_013512483 XP_013367937 MODEL 8773591 protein-coding LOC102018719 phospholipid scramblase 2-like NW_004955474 10991013 11067397 + 102018719 AGCD01054605;AGCD01054606;AGCD01054607;AGCD01054608;GBDF01044008;XM_005401433;XM_005401434;XM_005401435;XM_005401436 XP_005401490;XP_005401491;XP_005401492;XP_005401493 MODEL 8819299 pseudo LOC102003423 eukaryotic translation initiation factor 2 subunit 2 pseudogene NW_004955464 11721827 11722678 - 102003423 AGCD01050161 MODEL 9027635 ncrna LOC102005205 uncharacterized LOC102005205 NW_004955403 8964592 8970691 - 102005205 AGCD01001898;GBDF01159891;XR_001234497 MODEL 8738558 protein-coding Tex9 testis expressed 9 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centriolar satellite (ortholog) NW_004955450 17885148 17942136 - 102015795 AGCD01042891;AGCD01042892;AGCD01042893;AGCD01042894;AGCD01042895;AGCD01042896;GBBH01211747;GBDI01295788;XM_005393900 XP_005393957 MODEL 9027124 protein-coding LOC102004491 olfactory receptor 2A5 NW_004955491 387723 388640 + 102004491 AGCD01060331;XM_005404723 XP_005404780 MODEL 8775340 protein-coding CUNH9orf152 chromosome unknown C9orf152 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955419 16910030 16917851 + 102017237 AGCD01020135;GBDJ01422372;XM_005382746 XP_005382803 MODEL 10213279 ncrna LOC106147307 uncharacterized LOC106147307 NW_004955541 1304596 1309269 - 106147307 AGCD01071374;GBDI01245866;XR_001232144 MODEL 8851553 pseudo LOC102009321 MORC family CW-type zinc finger protein 2A pseudogene NW_004955438 6361423 6366279 + 102009321 AGCD01035101 MODEL 8733591 pseudo LOC102010496 normal mucosa of esophagus-specific gene 1 protein pseudogene NW_004955421 23376672 23380513 - 102010496 AGCD01022183 MODEL 8809700 protein-coding Tspan12 tetraspanin 12 ENCODES a protein that exhibits Wnt receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); maintenance of blood-brain barrier (ortholog); Norrin signaling pathway (ortholog); ASSOCIATED WITH Disease Susceptibility (ortholog); exudative vitreoretinopathy (ortholog); exudative vitreoretinopathy 5 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955479 2570937 2636884 - 102005930 AGCD01056276;AGCD01056277;GBCB01074924;GBCE01134144;XM_013503288 XP_013358742 MODEL 8934962 protein-coding Xirp1 xin actin binding repeat containing 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament organization (ortholog); cardiac muscle cell development (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hypertrophic cardiomyopathy (ortholog); melanoma (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); fascia adherens (ortholog) NW_004955427 24778157 24787691 + 102024824 AGCD01027521;GBCB01007246;XM_005386558;XM_005386559;XM_005386560;XM_005386561 XP_005386615;XP_005386616;XP_005386617;XP_005386618 MODEL 39133616 snrna U4 U4 spliceosomal RNA 9013604 pseudo LOC102021290 uncharacterized LOC102021290 NW_004955447 10934204 10968303 + 102021290 AGCD01040895 MODEL 8776221 protein-coding Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) ENCODES a protein that exhibits globoside alpha-N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN globoside metabolic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955513 2426623 2438019 - 102008134 AGCD01066880;GBBH01122771;XM_005408414;XM_005408415;XM_005408417;XM_013506552 XP_005408471;XP_005408472;XP_005408474;XP_013362006 MODEL 8717310 pseudo LOC102014069 high mobility group protein B3 pseudogene NW_004955505 5110525 5111126 + 102014069 AGCD01065145 MODEL 9028574 protein-coding Gjd4 gap junction protein delta 4 INVOLVED IN regulation of satellite cell activation involved in skeletal muscle regeneration (ortholog); FOUND IN plasma membrane (ortholog) NW_004955462 5893296 5901976 - 102029378 AGCD01049264;GBDF01182746;XM_005398156;XM_005398157 XP_005398213;XP_005398214 MODEL 8707225 pseudo LOC102012902 E3 ubiquitin-protein ligase RNF13-like NW_004955550 44557 45787 + 102012902 AGCD01072481 MODEL 8717850 protein-coding Fgl2 fibrinogen like 2 ENCODES a protein that exhibits peptidase activator activity (ortholog); INVOLVED IN negative regulation of defense response to virus (ortholog); negative regulation of dendritic cell antigen processing and presentation (ortholog); negative regulation of macrophage antigen processing and presentation (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); autoimmune glomerulonephritis (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog) NW_004955410 7899263 7903499 + 102010979 AGCD01010726;GBCE01075859;GBDF01281505;XM_005377557 XP_005377614 MODEL 8835305 protein-coding LOC102009725 sperm motility kinase Z-like NW_004955421 18237422 18307124 + 102009725 AGCD01022039;AGCD01022040;AGCD01022041;AGCD01022042;GBBH01067465;XM_005383799;XM_005383800;XM_013513643;XR_001233830 XP_005383856;XP_005383857;XP_013369097 MODEL 8763920 ncrna LOC102017904 uncharacterized LOC102017904 NW_004955431 14669607 14678845 - 102017904 AGCD01030337;GBDF01235010;XR_261473 MODEL 9001699 protein-coding LOC102015965 chromosome unknown open reading frame, human C16orf82 NW_004955493 5286875 5344419 + 102015965 AGCD01061061;AGCD01061062;GBDF01008629;XM_013504745 XP_013360199 MODEL 8843210 protein-coding Lima1 LIM domain and actin binding 1 ENCODES a protein that exhibits actin filament binding (ortholog); actin monomer binding (ortholog); microtubule stabilizing activity (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell migration (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); brush border (ortholog) NW_004955547 730152 827644 - 102015666 AGCD01072174;AGCD01072175;AGCD01072176;AGCD01072177;AGCD01072178;AGCD01072179;AGCD01072180;AGCD01072181;GBDK01135743;XM_013508484;XM_013508485;XM_013508486;XM_013508487;XM_013508488;XM_013508489 XP_013363938;XP_013363939;XP_013363940;XP_013363941;XP_013363942;XP_013363943 MODEL 9060382 protein-coding LOC102025227 cytochrome c oxidase subunit 6B1 INVOLVED IN substantia nigra development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cytochrome-c oxidase deficiency disease (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955468 2884958 2891952 - 102025227 AGCD01051842;GBDI01012604;XM_005399978 XP_005400035 MODEL 8705067 protein-coding Rab10 RAB10, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GDP-dissociation inhibitor binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); axonogenesis (ortholog); cellular response to antibiotic (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); CIC-rearranged sarcoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cilium (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network (ortholog) NW_004955469 8057235 8138983 + 102009369 AGCD01052446;AGCD01052447;AGCD01052448;AGCD01052449;AGCD01052450;AGCD01052451;AGCD01052452;GBDF01090181;XM_005400418 XP_005400475 MODEL 39133126 snrna U6 U6 spliceosomal RNA 8804004 protein-coding Tusc2 tumor suppressor 2, mitochondrial calcium regulator INVOLVED IN cell maturation (ortholog); defense response to Gram-negative bacterium (ortholog); inflammatory response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955532 2128430 2131235 - 102030564 AGCD01070219;GBDF01004498;XM_005410261 XP_005410318 MODEL 39132749 snrna U6 U6 spliceosomal RNA 8779866 protein-coding Supt7l SPT7 like, STAGA complex subunit gamma ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN maintenance of protein location in nucleus (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FISCHER-ZIRNSAK PROGEROID SYNDROME (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); SAGA complex (ortholog) NW_004955469 9584863 9617194 - 102007755 AGCD01052510;GBCE01089637;XM_005400512;XM_005400513;XR_001236980 XP_005400569;XP_005400570 MODEL 8798803 pseudo LOC102020197 KDEL motif-containing protein 2 pseudogene NW_004955405 14139351 14140744 + 102020197 AGCD01004919 MODEL 8873382 protein-coding Dusp2 dual specificity phosphatase 2 ENCODES a protein that exhibits mitogen-activated protein kinase binding (ortholog); phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955470 3735224 3737667 - 102025900 AGCD01052708;AGCD01052709;GBBH01228596;GBDI01186539;XM_013522699 XP_013378153 MODEL 8856282 protein-coding Tnip1 TNFAIP3 interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); mitogen-activated protein kinase binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); leukocyte cell-cell adhesion (ortholog); MyD88-dependent toll-like receptor signaling pathway (ortholog); ASSOCIATED WITH asthma (ortholog); Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955408 2575324 2621845 + 102018060 AGCD01008014;AGCD01008015;GBCE01023304;XM_005376061;XM_013508185;XM_013508186;XM_013508187;XM_013508191;XM_013508195 XP_005376118;XP_013363639;XP_013363640;XP_013363641;XP_013363645;XP_013363649 MODEL 8720467 protein-coding Il17rd interleukin 17 receptor D INVOLVED IN negative regulation of epithelial to mesenchymal transition (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); arteriovenous malformations of the brain (ortholog); Brain Injuries (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955430 6842756 6873195 - 102013322 AGCD01029316;GBDK01095576;GBDK01353156;XM_013515704 XP_013371158 MODEL 8915404 protein-coding Lrrc73 leucine rich repeat containing 73 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); uveal melanoma (ortholog) NW_004955437 9337538 9340360 - 102010522 AGCD01034526;GBCQ01031442;XM_005389777 XP_005389834 MODEL 39132212 snrna U6 U6 spliceosomal RNA 8756228 ncrna LOC102012550 uncharacterized LOC102012550 NW_004955422 29069963 29074568 + 102012550 AGCD01023378;GBDJ01405387;XR_260929 MODEL 39132901 snrna U6 U6 spliceosomal RNA 9004580 protein-coding Gtf2a2 general transcription factor IIA subunit 2 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); RNA polymerase II preinitiation complex assembly (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription factor TFIIA complex (ortholog) NW_004955450 15181824 15195594 + 102011929 AGCD01042784;AGCD01042785;GBDF01007153;GBDK01096337;XM_005393828 XP_005393885 MODEL 8821262 protein-coding Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 ENCODES a protein that exhibits identical protein binding (ortholog); molecular function inhibitor activity (ortholog); poly(A) binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of RNA export from nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atherosclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); Grb2-Sos complex (ortholog); membrane (ortholog) NW_004955452 10413883 10458518 + 102014204 AGCD01044275;AGCD01044276;GBDF01047207;XM_005395038;XR_001236051;XR_262674 XP_005395095 MODEL 8803489 protein-coding LOC102007803 liver carboxylesterase 1-like NW_004955433 13305854 13329280 - 102007803 AGCD01031684;GBBH01002391;XM_005388326;XM_005388327 XP_005388383;XP_005388384 MODEL 8872756 protein-coding LOC102005206 PRAME family member 20-like NW_004955615 197175 199688 + 102005206 AGCD01077251;XM_005414983 XP_005415040 MODEL 8817817 pseudo LOC102003428 40S ribosomal protein S2 pseudogene NW_004955467 3259017 3259823 - 102003428 AGCD01051332 MODEL 9041182 protein-coding Scfd1 sec1 family domain containing 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); syntaxin binding (ortholog); INVOLVED IN negative regulation of autophagosome assembly (ortholog); post-Golgi vesicle-mediated transport (ortholog); regulation of ER to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cis-Golgi network (ortholog); Golgi-associated vesicle (ortholog) NW_004955409 29805909 29903208 - 102015293 AGCD01010282;AGCD01010283;GBDJ01181170;XM_005376970;XM_005376971;XM_013510387 XP_005377027;XP_005377028;XP_013365841 MODEL 8828322 protein-coding LOC102019111 keratin, type II cytoskeletal 6A NW_004955547 2871318 2880666 - 102019111 AGCD01072300;GBDJ01268420;XM_005411965 XP_005412022 MODEL 8947506 protein-coding Slc1a6 solute carrier family 1 member 6 ENCODES a protein that exhibits glutamate:sodium symporter activity (ortholog); high-affinity L-glutamate transmembrane transporter activity (ortholog); L-aspartate transmembrane transporter activity (ortholog); INVOLVED IN L-aspartate import across plasma membrane (ortholog); L-glutamate import across plasma membrane (ortholog); L-glutamate transmembrane transport (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955495 8270601 8314874 + 102014259 AGCD01062195;AGCD01062196;AGCD01062197;AGCD01062198;GBDF01224187;XM_005406101;XM_005406102;XM_005406103;XM_005406104 XP_005406158;XP_005406159;XP_005406160;XP_005406161 MODEL 9034945 pseudo LOC102023075 casein kinase II subunit alpha pseudogene NW_004955536 314150 315348 - 102023075 AGCD01070724 MODEL 8849818 ncrna LOC102009325 uncharacterized LOC102009325 NW_004955442 15855701 15859607 - 102009325 AGCD01037883;GBDF01303907;XR_262159 MODEL 8749979 pseudo LOC102025229 small EDRK-rich factor 1 pseudogene NW_004955468 10128117 10128305 - 102025229 AGCD01052067;XM_005400310 MODEL 8875061 protein-coding Nr3c1 nuclear receptor subfamily 3 group C member 1 ENCODES a protein that exhibits chromatin binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN adrenal gland development (ortholog); associative learning (ortholog); astrocyte differentiation (ortholog); PARTICIPATES IN cortisol signaling pathway; forkhead class A signaling pathway; prednisolone pharmacodynamics pathway; ASSOCIATED WITH 46, XX Disorders of Sex Development (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955415 10494704 10585778 + 102022493 AGCD01016136;GBBH01228283;XM_005380692;XM_005380694 XP_005380749;XP_005380751 MODEL 10365417 ncrna LOC106147308 uncharacterized LOC106147308 NW_004955542 3342004 3348562 - 106147308 AGCD01071550;GBBH01052855;XR_001232145 MODEL 8751711 protein-coding Taf7 TATA-box binding protein associated factor 7 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone acetyltransferase binding (ortholog); histone H3K27me3 reader activity (ortholog); INVOLVED IN DNA-templated transcription initiation (ortholog); estrogen receptor signaling pathway (ortholog); mRNA transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN cytoplasm (ortholog); MLL1 complex (ortholog); nucleus (ortholog) NW_004955415 12453655 12456070 + 102009938 AGCD01016196;GBBH01033487;XM_005380736 XP_005380793 MODEL 8817050 protein-coding Sin3b SIN3 transcription regulator family member B ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cardiac muscle tissue development (ortholog); negative regulation of DNA-templated transcription (ortholog); skeletal muscle tissue development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); coloboma (ortholog); FOUND IN autosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955524 1049828 1067637 - 102029111 AGCD01068733;AGCD01068734;GBBH01118323;XM_013507309 XP_013362763 MODEL 9027720 protein-coding Xirp2 xin actin binding repeat containing 2 ENCODES a protein that exhibits actin filament binding (ortholog); alpha-actinin binding (ortholog); INVOLVED IN cardiac muscle tissue morphogenesis (ortholog); cell-cell junction organization (ortholog); positive regulation of protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Congenital Heart Defects, Multiple Types, 4 (ortholog); depressive disorder (ortholog); FOUND IN anchoring junction (ortholog); cell-cell junction (ortholog); focal adhesion (ortholog) NW_004955449 7054636 7131668 - 102008586 AGCD01041972;AGCD01041973;GBCB01003932;XM_013518803 XP_013374257 MODEL 8795883 ncrna LOC102022031 uncharacterized LOC102022031 NW_004955447 11648372 11723145 - 102022031 AGCD01040911;AGCD01040912;AGCD01040913;AGCD01040914;AGCD01040915;GBDF01052321;XR_001235704;XR_262421 MODEL 39131577 protein-coding SMIM32 small integral membrane protein 32 9024969 ncrna LOC102014071 uncharacterized LOC102014071 NW_004955506 4721256 4728012 - 102014071 AGCD01065342;GBDF01221712;XR_001231588;XR_264354 MODEL 9021760 protein-coding Exd2 exonuclease 3'-5' domain containing 2 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); 3'-5'-RNA exonuclease activity (ortholog); INVOLVED IN DNA double-strand break processing (ortholog); double-strand break repair (ortholog); double-strand break repair via homologous recombination (ortholog); FOUND IN chromosome (ortholog); mitochondrial matrix (ortholog); mitochondrial outer membrane (ortholog) NW_004955466 1114299 1169124 - 102029275 AGCD01050689;AGCD01050690;AGCD01050691;AGCD01050692;AGCD01050693;GBCE01153423;XM_005399039;XM_005399040 XP_005399096;XP_005399097 MODEL 8978403 protein-coding LOC102010497 chromosome unknown open reading frame, human C16orf54 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955493 7204452 7207168 + 102010497 AGCD01061164;GBCQ01165127;XM_005405245;XM_005405246;XR_264093 XP_005405302;XP_005405303 MODEL 8710522 protein-coding Tfam transcription factor A, mitochondrial ENCODES a protein that exhibits chromatin binding (ortholog); heat shock protein binding (ortholog); mitochondrial promoter sequence-specific DNA binding (ortholog); INVOLVED IN mitochondrial respiratory chain complex assembly (ortholog); mitochondrial transcription (ortholog); response to hypoxia (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); Animal Disease Models (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955425 12106506 12121625 + 102009855 AGCD01025499;GBDF01004784;XM_005385914 XP_005385971 MODEL 8961001 protein-coding Tcaf2 TRPM8 channel associated factor 2 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); positive regulation of cell migration (ortholog); positive regulation of protein targeting to membrane (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cell junction (ortholog); plasma membrane (ortholog) NW_004955491 149111 167578 - 102030324 AGCD01060323;AGCD01060324;GBDJ01385755;XM_013504665;XM_013504666 XP_013360119;XP_013360120 MODEL 8955232 ncrna LOC102009731 uncharacterized LOC102009731 NW_004955495 6647375 6652586 + 102009731 AGCD01062086;GBDK01350689;XR_264167 MODEL 8730603 ncrna LOC102003758 uncharacterized LOC102003758 NW_004955415 5445231 5497596 + 102003758 AGCD01015995;GBDK01101825;XR_260270 MODEL 8927810 protein-coding CUNH9orf43 chromosome unknown C9orf43 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955419 14067894 14086931 - 102026747 AGCD01020011;GBDF01002181;XM_013513125;XM_013513126;XM_013513127;XM_013513128;XM_013513129;XM_013513130;XM_013513132 XP_013368579;XP_013368580;XP_013368581;XP_013368582;XP_013368583;XP_013368584;XP_013368586 MODEL 9030958 protein-coding Sack1g scaffolding CK1 anchoring protein G INVOLVED IN BMP signaling pathway (ortholog); ASSOCIATED WITH palmoplantar keratosis (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955467 594921 623661 + 102005018 AGCD01051226;AGCD01051227;GBDK01060112;XM_005399278;XM_013522189 XP_005399335;XP_013377643 MODEL 8742476 protein-coding Tspan13 tetraspanin 13 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN regulation of calcium ion transmembrane transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955410 19971216 19979923 + 102021637 AGCD01011039;GBBH01095569;XM_013510494 XP_013365948 MODEL 9015041 protein-coding Rab11a RAB11A, member RAS oncogene family ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); G protein activity (ortholog); GTP binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); astral microtubule organization (ortholog); endocytic recycling (ortholog); PARTICIPATES IN autophagy pathway; eicosanoid signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Adducted Thumbs Syndrome (ortholog); anxiety disorder (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955450 9638761 9656291 - 102030586 AGCD01042594;GBCQ01006854;XM_005393706 XP_005393763 MODEL 8821186 protein-coding Limch1 LIM and calponin homology domains 1 ENCODES a protein that exhibits myosin II head/neck binding (ortholog); INVOLVED IN cytoplasmic actin-based contraction involved in cell motility (ortholog); negative regulation of cell migration (ortholog); positive regulation of stress fiber assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colorectal cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); myosin II complex (ortholog); stress fiber (ortholog) NW_004955443 5984027 6305014 - 102011054 AGCD01038245;AGCD01038246;AGCD01038247;AGCD01038248;AGCD01038249;GBCB01002554;GBDK01003882;XM_005391928;XM_005391930;XM_013518053 XP_005391985;XP_005391987;XP_013373507 MODEL 9029342 protein-coding Bmp7 bone morphogenetic protein 7 ENCODES a protein that exhibits BMP receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN allantois development (ortholog); anatomical structure formation involved in morphogenesis (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute kidney tubular necrosis (ortholog); Acute Otitis Media (ortholog); atrial heart septal defect 8 (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); vesicle (ortholog) NW_004955445 2154057 2235594 + 102006504 AGCD01039351;GBDK01182189;XM_005392260 XP_005392317 MODEL 8793455 protein-coding LOC102021298 putative V-set and immunoglobulin domain-containing-like protein IGHV4OR15-8 NW_004956458 3484 4133 + 102021298 AGCD01079630;XM_005415201 XP_005415258 MODEL 9055028 protein-coding Tusc3 tumor suppressor candidate 3 ENCODES a protein that exhibits oligosaccharyltransferase complex binding (ortholog); INVOLVED IN cognition (ortholog); magnesium ion transport (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); alternating exotropia (ortholog); astigmatism (ortholog); FOUND IN oligosaccharyltransferase complex (ortholog) NW_004955463 1633776 1848187 - 102012514 AGCD01049526;AGCD01049527;GBCQ01150942;XM_005398343 XP_005398400 MODEL 8888259 ncrna LOC102018720 uncharacterized LOC102018720 NW_004955415 16882130 16886583 - 102018720 AGCD01016404;XR_260301 MODEL 8996139 protein-coding Supv3l1 Suv3 like RNA helicase ENCODES a protein that exhibits 3'-5' RNA helicase activity (ortholog); 3'-5'-RNA exonuclease activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN DNA recombination (ortholog); mitochondrial mRNA catabolic process (ortholog); mitochondrial mRNA surveillance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial degradosome (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) NW_004955437 21880778 21905540 - 102024847 AGCD01034924;GBCQ01100665;XM_005390091;XM_005390092 XP_005390148;XP_005390149 MODEL 8907133 protein-coding Gk glycerol kinase ENCODES a protein that exhibits glycerol kinase activity (ortholog); histone binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); glycerol metabolic process (ortholog); glycerol-3-phosphate biosynthetic process (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955531 106761 183347 - 102016514 AGCD01069974;AGCD01069975;GBDI01289987;XM_005410125;XM_005410126;XM_013507561;XM_013507562;XM_013507563 XP_005410182;XP_005410183;XP_013363015;XP_013363016;XP_013363017 MODEL 8924571 protein-coding Lama4 laminin subunit alpha 4 INVOLVED IN blood vessel development (ortholog); brown fat cell differentiation (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); Bradycardia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN basement membrane (ortholog); extracellular region (ortholog); neuromuscular junction (ortholog) NW_004955526 4330388 4465810 + 102013861 AGCD01069366;AGCD01069367;GBBH01228905;GBCE01032722;XM_005409785 XP_005409842 MODEL 8981785 protein-coding Dmac1 distal membrane arm assembly component 1 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955434 11530632 11539237 - 102014280 AGCD01032379;AGCD01032380;GBBH01140816;XM_005388752 XP_005388809 MODEL 39131377 protein-coding SMIM33 small integral membrane protein 33 8899767 protein-coding LOC102004494 testis-specific Y-encoded-like protein 5 NW_004955422 306038 309442 - 102004494 AGCD01022403;AGCD01022404;XM_005384934 XP_005384991 MODEL 8939400 protein-coding Fgr FGR proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits Fc-gamma receptor I complex binding (ortholog); immunoglobulin receptor binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN bone mineralization (ortholog); defense response to Gram-positive bacterium (ortholog); integrin-mediated signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoskeleton (ortholog); plasma membrane (ortholog) NW_004955452 6840274 6863460 - 102007181 AGCD01044127;GBDJ01006866;XM_005394919;XM_005394920;XM_005394921;XM_005394922;XM_013519583;XM_013519584 XP_005394976;XP_005394977;XP_005394978;XP_005394979;XP_013375037;XP_013375038 MODEL 39132902 snrna U6 U6 spliceosomal RNA 9041316 ncrna LOC102018722 uncharacterized LOC102018722 NW_004955476 7403453 7410048 + 102018722 AGCD01055353;GBDF01016286;XR_263625 MODEL 8794434 protein-coding Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 ENCODES a protein that exhibits poly(A) binding (ortholog); poly(U) RNA binding (ortholog); SH2 domain binding (ortholog); INVOLVED IN regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); ovarian cancer (ortholog) NW_004955502 1486799 1944298 + 102025140 AGCD01064274;AGCD01064275;AGCD01064276;AGCD01064277;AGCD01064278;AGCD01064279;AGCD01064280;AGCD01064281;AGCD01064282;AGCD01064283;AGCD01064284;AGCD01064285;AGCD01064286;AGCD01064287;GBCQ01021020;XM_005406879 XP_005406936 MODEL 39133127 snrna U6 U6 spliceosomal RNA 8797367 pseudo LOC102003430 olfactory receptor 10J5-like NW_004955468 11314436 11315226 - 102003430 AGCD01052125 MODEL 39133617 snrna U4 U4 spliceosomal RNA 8957231 ncrna LOC102009732 uncharacterized LOC102009732 NW_004955424 3418563 3425506 - 102009732 AGCD01024310;GBDF01162625;XR_261036 MODEL 9055052 protein-coding Slc1a7 solute carrier family 1 member 7 ENCODES a protein that exhibits extracellularly glutamate-gated chloride channel activity (ortholog); glutamate:sodium symporter activity (ortholog); L-glutamate transmembrane transporter activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); L-glutamate transmembrane transport (ortholog); monoatomic anion transmembrane transport (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN axon terminus (ortholog); glutamatergic synapse (ortholog); photoreceptor cell terminal bouton (ortholog) NW_004955464 6032629 6069483 + 102013395 AGCD01050017;GBBH01023325;XM_005398562 XP_005398619 MODEL 8740987 protein-coding Gbp5 guanylate binding protein 5 ENCODES a protein that exhibits endopeptidase inhibitor activity (ortholog); GTPase activity (ortholog); identical protein binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); antiviral innate immune response (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); celiac disease (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955423 4914430 4926850 + 102011782 AGCD01023549;AGCD01023550;GBDJ01022960;XM_005385098 XP_005385155 MODEL 9058903 protein-coding Taf7l TATA-box binding protein associated factor 7 like INVOLVED IN flagellated sperm motility (ortholog); spermatid development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); oligospermia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955503 7429876 7451051 - 102024933 AGCD01064790;AGCD01064791;GBDK01149160;XM_005406947;XM_005406949;XM_013505851 XP_005407004;XP_005407006;XP_013361305 MODEL 9027868 ncrna LOC102020199 uncharacterized LOC102020199 NW_004955453 15979736 16061516 + 102020199 AGCD01044898;GBDI01367321;XR_262748;XR_262749 MODEL 730469457 misc_rna Xist_exon1 X-chromosome inactivation exon 1 8789675 protein-coding Dusp21 dual specificity phosphatase 21 ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); cytoplasm (ortholog); mitochondrial matrix (ortholog) NW_004955516 3369548 3370403 - 102003795 AGCD01067490;GBDF01156584;XM_005408994 XP_005409051 MODEL 8783419 protein-coding Tnip2 TNFAIP3 interacting protein 2 ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN CD40 signaling pathway (ortholog); cellular response to lipopolysaccharide (ortholog); interleukin-1-mediated signaling pathway (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955514 1682641 1687881 - 102005741 AGCD01067059;GBCE01032325;GBCQ01006867;XM_013506803 XP_013362257 MODEL 8918170 protein-coding Il17re interleukin 17 receptor E ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog) NW_004955561 1397286 1409999 + 102013018 AGCD01073855;GBDF01255893;XM_005413048;XM_005413049;XM_005413050 XP_005413105;XP_005413106;XP_005413107 MODEL 8762241 ncrna LOC102015969 uncharacterized LOC102015969 NW_004955497 3508336 3515107 + 102015969 AGCD01062543;GBDF01193122;XR_001231430;XR_264200 MODEL 8722367 protein-coding Lrrc74a leucine rich repeat containing 74A ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955438 805119 834335 + 102003283 AGCD01034963;AGCD01034964;GBDF01210386;XM_005390160;XM_005390161;XM_013517175;XM_013517176 XP_005390217;XP_005390218;XP_013372629;XP_013372630 MODEL 8828973 protein-coding Gtf2b general transcription factor IIB ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); nuclear thyroid hormone receptor binding (ortholog); INVOLVED IN chromosome organization (ortholog); gene expression (ortholog); meiotic sister chromatid cohesion (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell division site (ortholog); chromosome (ortholog); condensed chromosome (ortholog) NW_004955423 5420795 5447148 + 102016287 AGCD01023560;GBDF01128584;XM_005385113 XP_005385170 MODEL 8705676 protein-coding Slc71a1 solute carrier family 71 member 1 INVOLVED IN acrosome assembly (ortholog); sperm mitochondrion organization (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955435 4810919 4831829 + 102003580 AGCD01032855;GBCB01077165;GBDI01112507;XM_005388793;XM_013516437 XP_005388850;XP_013371891 MODEL 8724998 pseudo LOC102023080 60S ribosomal protein L13 pseudogene NW_004955443 19809334 19809985 - 102023080 AGCD01038635 MODEL 8934830 protein-coding CUNH9orf50 chromosome unknown C9orf50 homolog FOUND IN cytoplasm (ortholog) NW_004955570 1731774 1737757 - 102020729 AGCD01074826;AGCD01074827;GBDF01046864;XM_005413629 XP_005413686 MODEL 9049702 protein-coding LOC102012903 CMRF35-like molecule 4 NW_004955553 1487167 1496439 - 102012903 AGCD01072886;GBCE01119428;XM_005412249;XM_005412250 XP_005412306;XP_005412307 MODEL 8711734 pseudo LOC102025231 60S ribosomal protein L36 pseudogene NW_004955469 290871 292912 + 102025231 AGCD01052216 MODEL 8959976 protein-coding Sack1h scaffolding CK1 anchoring protein H ENCODES a protein that exhibits keratin filament binding (ortholog); protein kinase binding (ortholog); INVOLVED IN intermediate filament cytoskeleton organization (ortholog); positive regulation of cell migration (ortholog); protein localization to cytoskeleton (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 3A (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); keratin filament (ortholog) NW_004955454 2421393 2436012 - 102012607 AGCD01045020;AGCD01045021;GBCE01152697;XM_005395808;XM_005395810;XM_005395811;XM_013520054 XP_005395865;XP_005395867;XP_005395868;XP_013375508 MODEL 8878980 protein-coding LOC102022034 chromosome unknown open reading frame, human C1orf56 INVOLVED IN regulation of cell population proliferation (ortholog); ASSOCIATED WITH high grade glioma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955588 417837 421880 + 102022034 AGCD01076109;GBDF01009026;XM_005414483 XP_005414540 MODEL 8889098 protein-coding Nr3c2 nuclear receptor subfamily 3 group C member 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); histone acetyltransferase binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); cellular response to aldosterone (ortholog); intracellular sodium ion homeostasis (ortholog); PARTICIPATES IN aldosterone signaling pathway; amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955471 3059210 3397894 - 102017560 AGCD01053052;AGCD01053053;AGCD01053054;AGCD01053055;AGCD01053056;GBCB01076661;XM_005400874;XM_005400875 XP_005400931;XP_005400932 MODEL 8728818 pseudo LOC102007808 T-complex protein 1 subunit delta pseudogene NW_004955434 3956987 3963609 + 102007808 AGCD01032151;AGCD01032152;XR_261648 MODEL 8801000 protein-coding Gbx1 gastrulation brain homeobox 1 INVOLVED IN adult walking behavior (ortholog); neuron fate commitment (ortholog); proprioception (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN nucleus (ortholog) NW_004955491 5575836 5592804 - 102030540 AGCD01060490;AGCD01060491;GBDF01020669;GBDF01039541;XM_013504621 XP_013360075 MODEL 8818554 protein-coding Limd1 LIM domain containing 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); miRNA-mediated post-transcriptional gene silencing (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN adherens junction (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) NW_004955420 26290792 26328637 - 102007438 AGCD01021398;AGCD01021399;AGCD01021400;GBBH01126814;GBCE01142249;XM_005383471 XP_005383528 MODEL 8712202 ncrna LOC102020201 uncharacterized LOC102020201 NW_004955406 40111451 40112653 + 102020201 AGCD01006654;GBDF01027492;XR_259530 MODEL 9032182 protein-coding LOC102005207 tetratricopeptide repeat protein 30B NW_004955403 19185628 19196278 + 102005207 AGCD01002119;GBCE01133727;XM_005373399 XP_005373456 MODEL 8777261 protein-coding Gk2 glycerol kinase 2 INVOLVED IN flagellated sperm motility (ortholog); sperm mitochondrial sheath assembly (ortholog); spermatogenesis (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); sperm midpiece (ortholog) NW_004955433 3736428 3738360 - 102024040 AGCD01031433;GBDF01008264;XM_005388216 XP_005388273 MODEL 8763927 protein-coding LOC102017908 metallothionein-1E NW_004955433 14376480 14378539 + 102017908 AGCD01031721;AY533220;GBDF01120895;XM_005388357 AAS59423;XP_005388414 MODEL 39131480 protein-coding SMIM35 small integral membrane protein 35 8950958 protein-coding LOC102019112 olfactory receptor 11H12-like NW_004955550 163342 164301 - 102019112 AGCD01072485;XM_013508545 XP_013363999 MODEL 8856656 ncrna LOC102003760 uncharacterized LOC102003760 NW_004955475 4403226 4412590 - 102003760 AGCD01054876;AGCD01054877;GBDK01406757;XR_001230760;XR_001230761;XR_263610 MODEL 8947207 protein-coding Tfap2a transcription factor AP-2 alpha ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN anterior neuropore closure (ortholog); basement membrane organization (ortholog); bone morphogenesis (ortholog); ASSOCIATED WITH amblyopia (ortholog); branchiooculofacial syndrome (ortholog); branchiootorenal syndrome (ortholog); FOUND IN clathrin-coated pit (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955465 3877896 3900259 + 102019254 AGCD01050394;AGCD01050395;AGCD01050396;AGCD01050397;GBBH01228649;GBCQ01030706;XM_013521865;XM_013521866 XP_013377319;XP_013377320 MODEL 8934816 protein-coding Fh fumarate hydratase ENCODES a protein that exhibits fumarate hydratase activity (ortholog); histone binding (ortholog); INVOLVED IN arginine metabolic process (ortholog); DNA damage response (ortholog); fumarate metabolic process (ortholog); PARTICIPATES IN altered citric acid cycle pathway; citric acid cycle pathway; fumaric aciduria pathway; ASSOCIATED WITH Apnea (ortholog); Ataxia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955406 10535801 10558649 + 102018465 AGCD01005864;GBCB01004752;XM_005374820 XP_005374877 MODEL 8780245 protein-coding Tnip3 TNFAIP3 interacting protein 3 ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); MyD88-independent toll-like receptor signaling pathway (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Prostate Cancer (ortholog); lymphoma (ortholog) NW_004955428 19479633 19511738 + 102020468 AGCD01028092;GBDI01155280;XM_013515238;XM_013515239;XM_013515240;XM_013515241;XM_013515242;XM_013515243 XP_013370692;XP_013370693;XP_013370694;XP_013370695;XP_013370696;XP_013370697 MODEL 8775346 protein-coding LOC102018725 somatotropin-like NW_004955478 7920783 7923119 + 102018725 AGCD01055998;GBDJ01024839;XM_005402180 XP_005402237 MODEL 9060732 ncrna LOC102009328 uncharacterized LOC102009328 NW_004955558 871030 888543 + 102009328 AGCD01073396;AGCD01073397;AGCD01073398;AGCD01073399;GBDF01225099;XR_001232328;XR_001232329 MODEL 9050113 protein-coding Gk5 glycerol kinase 5 ENCODES a protein that exhibits glycerol kinase activity (ortholog); INVOLVED IN glycerol-3-phosphate biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955508 3596482 3637582 + 102028444 AGCD01065819;AGCD01065820;AGCD01065821;AGCD01065822;GBCQ01175897;GBDI01386886;XM_013506263 XP_013361717 MODEL 39132216 snrna U6 U6 spliceosomal RNA 8727981 protein-coding Tspan14 tetraspanin 14 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); tetraspanin-enriched microdomain (ortholog) NW_004955510 463548 490635 + 102028319 AGCD01066149;AGCD01066150;GBDJ01088086;XM_005407874 XP_005407931 MODEL 8935988 protein-coding Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA processing (ortholog); positive regulation of RNA splicing (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955461 9751057 9926211 + 102020536 AGCD01048952;GBCB01041798;GBCE01159678;XM_005398044 XP_005398101 MODEL 9029030 ncrna LOC102021300 uncharacterized LOC102021300 NW_004955404 13235320 13236944 - 102021300 AGCD01003481;GBDF01280967;XR_259307 MODEL 730468981 misc_rna TUSC7 Non-coding RNA LOC285194 8811337 protein-coding LOC102014076 olfactory receptor 5D18-like NW_004955511 4975490 4976440 + 102014076 AGCD01066541;XM_005408280 XP_005408337 MODEL 8928663 protein-coding Sinhcaf SIN3-HDAC complex associated factor INVOLVED IN negative regulation of cell differentiation (ortholog); negative regulation of cell migration (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN Sin3-type complex (ortholog) NW_004955505 4344465 4377463 + 102012560 AGCD01065104;AGCD01065105;AGCD01065106;AGCD01065107;GBBH01186638;XM_005407132 XP_005407189 MODEL 8835507 protein-coding Surf1 surfeit 1 ENCODES a protein that exhibits cytochrome-c oxidase activity (ortholog); INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH amblyopia (ortholog); apraxia (ortholog); astigmatism (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955513 2707877 2711606 - 102013745 AGCD01066886;GBCQ01005996;XM_005408431;XM_005408433;XM_013506695;XM_013506696 XP_005408488;XP_005408490;XP_013362149;XP_013362150 MODEL 10342817 protein-coding Exd3 exonuclease 3'-5' domain containing 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955513 5314370 5336052 - 106147039 AGCD01066967;XM_013506584 XP_013362038 MODEL 39132904 snrna U6 U6 spliceosomal RNA 8831957 protein-coding Lama5 laminin subunit alpha 5 ENCODES a protein that exhibits integrin binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); branching involved in salivary gland morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); bent bone dysplasia syndrome 1 (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular matrix of synaptic cleft (ortholog) NW_004955528 1713110 1753374 + 102029325 AGCD01069569;GBBH01032813;GBCE01053732;XM_013507490;XM_013507491;XM_013507492 XP_013362944;XP_013362945;XP_013362946 MODEL 39132750 snrna U6 U6 spliceosomal RNA 8970787 protein-coding LOC102010503 lariat debranching enzyme-like NW_004955501 822211 823819 + 102010503 AGCD01064040;GBDF01305393;XM_005406749 XP_005406806 MODEL 8860177 protein-coding Tcaim T cell activation inhibitor, mitochondrial ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955420 27014846 27046932 - 102012654 AGCD01021447;AGCD01021448;AGCD01021449;GBCQ01064220;XM_005383484;XM_013513519 XP_005383541;XP_013368973 MODEL 8807163 pseudo LOC102003433 heterogeneous nuclear ribonucleoprotein A1-like NW_004955469 9146985 9148365 + 102003433 AGCD01052493 MODEL 39133128 snrna U6 U6 spliceosomal RNA 39133619 snrna U4 U4 spliceosomal RNA 8998782 protein-coding LOC102009733 probable N-acetyltransferase CML1 NW_004955424 11899258 11900803 - 102009733 AGCD01024576;GBCQ01149453;XM_013514700 XP_013370154 MODEL 9021302 pseudo LOC102012551 leucine-rich repeat-containing protein 58 pseudogene NW_004955494 8245217 8247491 + 102012551 AGCD01061581 MODEL 9019112 protein-coding Slc20a1 solute carrier family 20 member 1 ENCODES a protein that exhibits high-affinity phosphate:sodium symporter activity (ortholog); sodium:phosphate symporter activity (ortholog); INVOLVED IN biomineral tissue development (ortholog); cell population proliferation (ortholog); phosphate ion transport (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Calcification of Aortic Valve (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955470 1634470 1649234 - 102025232 AGCD01052650;AGCD01052651;GBDF01188180;XM_005400598 XP_005400655 MODEL 8823269 protein-coding Bmpr1a bone morphogenetic protein receptor type 1A ENCODES a protein that exhibits ATP binding (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); anti-Mullerian hormone receptor signaling pathway (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma with ETV6-RUNX1 (ortholog); breast cancer (ortholog); breast carcinoma (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); dendrite (ortholog) NW_004955510 5812571 5936312 + 102011346 AGCD01066293;AGCD01066294;AGCD01066295;AGCD01066296;AGCD01066297;GBBH01207322;GBBH01207324;XM_005407907 XP_005407964 MODEL 8734323 protein-coding LOC102012904 heterogeneous nuclear ribonucleoproteins A2/B1-like NW_004955442 15309996 15311329 - 102012904 AGCD01037865;GBDF01258035;XM_005391493 XP_005391550 MODEL 8878194 protein-coding Taf8 TATA-box binding protein associated factor 8 INVOLVED IN DNA-templated transcription open complex formation (ortholog); inner cell mass cell proliferation (ortholog); maintenance of protein location in nucleus (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 8317437 8328544 + 102020049 AGCD01034485;AGCD01034486;GBDK01233514;XM_005389711;XM_005389713;XM_013516780;XM_013516781 XP_005389768;XP_005389770;XP_013372234;XP_013372235 MODEL 730469233 misc_rna Xist_exon4 X-chromosome inactivation exon 4 8981739 protein-coding Scfd2 sec1 family domain containing 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog) NW_004955447 17341990 17748735 + 102013984 AGCD01041118;AGCD01041119;AGCD01041120;AGCD01041121;AGCD01041122;AGCD01041123;AGCD01041124;AGCD01041125;AGCD01041126;AGCD01041127;AGCD01041128;AGCD01041129;AGCD01041130;AGCD01041131;AGCD01041132;AGCD01041133;AGCD01041134;GBDF01278277;XM_005392914;XM_013518524;XM_013518525;XR_001235725 XP_005392971;XP_013373978;XP_013373979 MODEL 8979472 ncrna LOC102021311 uncharacterized LOC102021311 NW_004955407 37939818 37945531 - 102021311 AGCD01007789;XR_259622 MODEL 8920172 protein-coding Dusp22 dual specificity phosphatase 22 ENCODES a protein that exhibits non-membrane spanning protein tyrosine phosphatase activity (ortholog); protein tyrosine kinase binding (ortholog); protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); intracellular signal transduction (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); filamentous actin (ortholog); leading edge of lamellipodium (ortholog) NW_004955465 12551063 12597386 - 102030165 AGCD01050550;GBCB01021922;XM_005398940;XM_013521850 XP_005398997;XP_013377304 MODEL 9007529 protein-coding Nr4a1 nuclear receptor subfamily 4 group A member 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN apoptotic process (ortholog); cell migration involved in sprouting angiogenesis (ortholog); cellular response to corticotropin-releasing hormone stimulus (ortholog); ASSOCIATED WITH Albuminuria (ortholog); blood pressure trait (ortholog); blood urea nitrogen amount (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); fibrillar center (ortholog) NW_004955547 2404532 2426882 + 102030350 AGCD01072280;GBDK01285053;XM_005411924;XM_005411925 XP_005411981;XP_005411982 MODEL 8995815 pseudo LOC102015972 calcyclin-binding protein pseudogene NW_004955506 6547195 6548094 + 102015972 AGCD01065430 MODEL 9010045 protein-coding Gtf2e1 general transcription factor IIE subunit 1 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN RNA polymerase II preinitiation complex assembly (ortholog); transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription factor TFIID complex (ortholog) NW_004955427 20242326 20273314 + 102025819 AGCD01027394;GBDK01432123;XM_005386470;XM_005386471;XM_005386472 XP_005386527;XP_005386528;XP_005386529 MODEL 9055927 protein-coding Slc71a2 solute carrier family 71 member 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955422 24000123 24061998 - 102025591 AGCD01023213;AGCD01023214;AGCD01023215;GBBH01116404;GBDK01142751;XM_013514003 XP_013369457 MODEL 8805071 protein-coding Rab11b RAB11B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); cellular response to acidic pH (ortholog); constitutive secretory pathway (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); genetic disease (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); phagocytic vesicle (ortholog) NW_004955563 1008267 1017315 - 102014839 AGCD01074102;AGCD01074103;AGCD01074104;GBBH01031204;GBCE01001173;XM_005413131 XP_005413188 MODEL 8766476 protein-coding LOC102017911 butyrophilin-like protein 1 NW_004955437 927041 935952 - 102017911 AGCD01034174;AGCD01034175;GBCQ01010671;XM_013516773 XP_013372227 MODEL 8843339 protein-coding LOC102019114 tubulin alpha-3 chain-like NW_004955442 19296034 19308163 + 102019114 AGCD01038049;AGCD01038050;AGCD01038051;GBDF01010845;GBDK01361085;XM_013517984 XP_013373438 MODEL 8779241 protein-coding Fhad1 forkhead associated phosphopeptide binding domain 1 INVOLVED IN apoptotic process (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955527 2756630 2879135 - 102014281 AGCD01069466;AGCD01069467;AGCD01069468;AGCD01069469;GBBH01127202;GBDI01262100;XM_013507414 XP_013362868 MODEL 8882591 protein-coding Tfap2b transcription factor AP-2 beta ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN aorta morphogenesis (ortholog); collecting duct development (ortholog); distal tubule development (ortholog); ASSOCIATED WITH angle-closure glaucoma (ortholog); Body Weight (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleus (ortholog) NW_004955411 7143095 7171285 - 102003421 AGCD01011697;AGCD01011698;GBCQ01004319;XM_005377662;XM_005377663;XM_013510933;XR_259924 XP_005377719;XP_005377720;XP_013366387 MODEL 8763885 protein-coding Tnk1 tyrosine kinase non receptor 1 ENCODES a protein that exhibits ATP binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of Ras protein signal transduction (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 54 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955467 9539693 9547419 - 102016463 AGCD01051516;GBDK01237114;XM_005399502;XM_013522120;XM_013522121 XP_005399559;XP_013377574;XP_013377575 MODEL 8797368 protein-coding LOC102003434 olfactory receptor 51M1-like NW_004955414 21278585 21279689 + 102003434 AGCD01015411;XM_013511772 XP_013367226 MODEL 8765206 protein-coding LOC102022035 glyoxalase domain-containing protein 4 NW_004955892 4493 13806 - 102022035 AGCD01078595;GBCB01023686;GBCE01074554;XM_005415140 XP_005415197 MODEL 8843670 ncrna LOC102004497 uncharacterized LOC102004497 NW_004955499 552253 553238 - 102004497 AGCD01063239;XR_264215 MODEL 8999420 protein-coding Gkap1 G kinase anchoring protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of insulin receptor signaling pathway (ortholog); receptor guanylyl cyclase signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955432 3459100 3532889 + 102009974 AGCD01030664;AGCD01030665;AGCD01030666;AGCD01030667;AGCD01030668;GBCE01016799;XM_005387958;XM_013515998 XP_005388015;XP_013371452 MODEL 8713631 protein-coding Tspan15 tetraspanin 15 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); late endosome membrane (ortholog); plasma membrane (ortholog) NW_004955437 21643018 21687355 - 102022633 AGCD01034919;GBDI01066539;XM_005390084;XM_013517075;XM_013517076 XP_005390141;XP_013372529;XP_013372530 MODEL 8816121 protein-coding Il18 interleukin 18 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-18 receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell population proliferation (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN apical plasma membrane (ortholog); decoy receptor complex (ortholog); extracellular region (ortholog) NW_004955412 13807361 13826007 - 102027829 AGCD01012846;GBCQ01010502;XM_005378111;XM_005378112 XP_005378168;XP_005378169 MODEL 8749874 pseudo LOC102020202 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial pseudogene NW_004955406 12166989 12168622 + 102020202 AGCD01005909 MODEL 9015553 protein-coding Slc20a2 solute carrier family 20 member 2 ENCODES a protein that exhibits sodium:phosphate symporter activity (ortholog); virus receptor activity (ortholog); INVOLVED IN positive regulation of bone mineralization (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH anxiety disorder (ortholog); aphasia (ortholog); Back Pain (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) NW_004955536 392341 496616 + 102006389 AGCD01070726;AGCD01070727;AGCD01070728;GBCQ01041012;GBDK01002048;XM_005410504 XP_005410561 MODEL 10169615 ncrna LOC106147309 uncharacterized LOC106147309 NW_004955542 2037469 2043521 + 106147309 AGCD01071510;GBDJ01268875;XR_001232147 MODEL 8803814 protein-coding Limd2 LIM domain containing 2 ASSOCIATED WITH Breast Neoplasms (ortholog); melanoma (ortholog); Neoplasm Recurrence, Local (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955478 8120405 8121826 + 102024332 AGCD01056012;GBCQ01129620;GBDI01018647;XM_005402202 XP_005402259 MODEL 8855679 protein-coding Lrrc74b leucine rich repeat containing 74B ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955442 19272350 19296090 + 102021714 AGCD01038045;AGCD01038046;AGCD01038047;AGCD01038048;AGCD01038049;GBDF01016721;XM_013517985 XP_013373439 MODEL 8830119 protein-coding Scg2 secretogranin II ENCODES a protein that exhibits chemoattractant activity (ortholog); cytokine activity (ortholog); INVOLVED IN angiogenesis (ortholog); eosinophil chemotaxis (ortholog); induction of positive chemotaxis (ortholog); ASSOCIATED WITH lung cancer (ortholog); FOUND IN dense core granule (ortholog); extracellular region (ortholog); neuronal dense core vesicle (ortholog) NW_004955453 10361440 10366956 + 102021517 AGCD01044784;GBDI01218940;XM_005395488;XM_005395489 XP_005395545;XP_005395546 MODEL 39131576 protein-coding SMIM36 small integral membrane protein 36 39132905 snrna U6 U6 spliceosomal RNA 8774641 protein-coding Exo1 exonuclease 1 ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN DNA recombination (ortholog); DNA strand resection involved in replication fork processing (ortholog); humoral immune response mediated by circulating immunoglobulin (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; mismatch repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955406 10248981 10276207 - 102016665 AGCD01005851;GBDF01014333;XM_005374813;XM_005374814;XM_005374815;XM_013520497;XM_013520501 XP_005374870;XP_005374871;XP_005374872;XP_013375951;XP_013375955 MODEL 8840530 protein-coding LOC102003764 collagen alpha-1(III) chain-like NW_004955478 11060155 11061599 - 102003764 AGCD01056157;GBCB01001731;XM_005402303 XP_005402360 MODEL 10332444 protein-coding Taf9 TATA-box binding protein associated factor 9 ENCODES a protein that exhibits ATPase binding (ortholog); C2H2 zinc finger domain binding (ortholog); DNA binding (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog); mRNA transcription by RNA polymerase II (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955575 74506 76272 - 106146233 AGCD01075200;XM_013509601 XP_013365055 MODEL 9030056 protein-coding LOC102018726 uncharacterized LOC102018726 NW_004955478 10841511 10868929 - 102018726 AGCD01056152;GBDF01195145;XM_005402275;XM_013503217;XR_001230851;XR_001230852;XR_001230853 XP_005402332;XP_013358671 MODEL 8728599 protein-coding LOC102023082 cytochrome c oxidase subunit 6B2 INVOLVED IN ATP biosynthetic process (ortholog); cell differentiation (ortholog); oxygen metabolic process (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); sarcoma (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrion (ortholog) NW_004955567 890281 891675 + 102023082 AGCD01074444;AGCD01074445;GBDF01085437;XM_005413321 XP_005413378 MODEL 8833658 protein-coding Lamb1 laminin subunit beta 1 ENCODES a protein that exhibits enzyme binding (ortholog); extracellular matrix structural constituent (ortholog); glycosphingolipid binding (ortholog); INVOLVED IN cell migration (ortholog); embryo implantation (ortholog); endodermal cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adult-onset leukoencephalopathy without lacunae (ortholog); autism spectrum disorder (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955410 12241235 12305433 - 102008605 AGCD01010850;AGCD01010851;GBCE01055047;XM_005377293 XP_005377350 MODEL 8714405 pseudo LOC102025233 olfactory receptor 52B2-like NW_004955414 20838501 20839444 - 102025233 AGCD01015390 MODEL 8756856 protein-coding CUNH9orf78 chromosome unknown C9orf78 homolog ENCODES a protein that exhibits U5 snRNA binding (ortholog); INVOLVED IN mRNA cis splicing, via spliceosome (ortholog); regulation of homologous chromosome segregation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromosome, centromeric region (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955513 38060 43450 - 102013111 AGCD01066810;GBDJ01089128;XM_005408332;XM_013506705 XP_005408389;XP_013362159 MODEL 8817217 protein-coding Sacm1l SAC1 like phosphatidylinositide phosphatase ENCODES a protein that exhibits phosphatase activity (ortholog); phosphatidylinositol-3,5-bisphosphate phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); INVOLVED IN exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); neurotransmitter receptor transport to postsynaptic membrane (ortholog); phosphatidylinositol dephosphorylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955420 26231597 26280516 - 102006918 AGCD01021396;AGCD01021397;AGCD01021398;GBDI01179708;XM_005383470 XP_005383527 MODEL 8744266 ncrna LOC102012556 uncharacterized LOC102012556 NW_004955500 5638086 5640274 - 102012556 AGCD01063847;GBDF01250373;XR_264229 MODEL 8734059 pseudo LOC102005209 peptidyl-prolyl cis-trans isomerase D pseudogene NW_004955762 7725 8459 + 102005209 AGCD01078304 MODEL 8793843 protein-coding LOC102007810 glutathione S-transferase Mu 2 NW_004955435 13099385 13175462 + 102007810 AGCD01033184;AGCD01033185;AGCD01033186;AGCD01033187;AGCD01033188;AGCD01033189;AGCD01033190;AGCD01033191;AGCD01033192;AGCD01033193;GBCE01002116;GBDI01010302;XM_005388888 XP_005388945 MODEL 8922735 protein-coding Gbx2 gastrulation brain homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II core promoter sequence-specific DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN autonomic nervous system development (ortholog); axon guidance (ortholog); branching involved in blood vessel morphogenesis (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); stomach cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955453 538066 541415 + 102029586 AGCD01044594;AGCD01044595;XM_013519759 XP_013375213 MODEL 8879707 protein-coding Dmac2 distal membrane arm assembly component 2 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Mesothelioma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955555 362287 370276 - 102018992 AGCD01073024;AGCD01073025;GBDJ01091232;XM_005412352;XM_013508782 XP_005412409;XP_013364236 MODEL 730469397 misc_rna XIST_intron XIST 3' intron conserved motif 39132751 snrna U6 U6 spliceosomal RNA 9040004 ncrna LOC102021315 uncharacterized LOC102021315 NW_004955408 24229582 24231940 - 102021315 AGCD01008604;GBDF01157222;XR_001232408;XR_001232409;XR_259709 MODEL 39133129 snrna U6 U6 spliceosomal RNA 39132218 snrna U6 U6 spliceosomal RNA 8748975 protein-coding Rab11fip1 RAB11 family interacting protein 1 INVOLVED IN negative regulation of adiponectin secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); recycling endosome (ortholog) NW_004955463 13565956 13600016 - 102013808 AGCD01049872;AGCD01049873;AGCD01049874;AGCD01049875;GBCE01186560;XM_005398418;XM_005398419 XP_005398475;XP_005398476 MODEL 9018196 protein-coding Khk ketohexokinase ENCODES a protein that exhibits ATP binding (ortholog); fructose binding (ortholog); identical protein binding (ortholog); INVOLVED IN fructose catabolic process (ortholog); fructose metabolic process (ortholog); regulation of glycogen biosynthetic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); carbohydrate metabolic disorder (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955469 9058095 9071091 + 102019905 AGCD01052488;AGCD01052489;GBCB01043782;XM_005400453;XM_005400454;XM_005400455;XM_013522609;XM_013522610 XP_005400510;XP_005400511;XP_005400512;XP_013378063;XP_013378064 MODEL 8846606 protein-coding LOC102018733 uncharacterized LOC102018733 NW_004955420 25222759 25231032 - 102018733 AGCD01021347;GBBH01116817;XM_005383418;XR_001233696;XR_260751 XP_005383475 MODEL 8959994 pseudo LOC102014078 chromobox protein homolog 3 pseudogene NW_004955433 15960858 15962895 - 102014078 AGCD01031778 MODEL 8825299 protein-coding Sipa1 signal-induced proliferation-associated 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cellular response to water deprivation (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog) NW_004955422 19615440 19627195 - 102003459 AGCD01023024;GBDJ01018460;XM_005384470;XM_013513855;XM_013513856;XM_013513857;XM_013513858 XP_005384527;XP_013369309;XP_013369310;XP_013369311;XP_013369312 MODEL 9046730 protein-coding LOC102012905 tektin-4-like NW_004955442 16149329 16154459 + 102012905 AGCD01037891;AGCD01037892;GBDF01003534;XM_005391594 XP_005391651 MODEL 8703813 protein-coding Bmpr1b bone morphogenetic protein receptor type 1B ENCODES a protein that exhibits ATP binding (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); bone development (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acromesomelic dysplasia 3 (ortholog); acromesomelic dysplasia, Hunter-Thompson type (ortholog); asthma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) NW_004955405 5408171 5784930 + 102013791 AGCD01004682;AGCD01004683;AGCD01004684;AGCD01004685;AGCD01004686;AGCD01004687;GBDI01326385;XM_013517414;XM_013517415;XM_013517416;XM_013517418;XM_013517428;XM_013517431;XM_013517434;XM_013517436;XM_013517437 XP_013372868;XP_013372869;XP_013372870;XP_013372872;XP_013372882;XP_013372885;XP_013372888;XP_013372890;XP_013372891 MODEL 9031590 protein-coding Tnk2 tyrosine kinase non receptor 2 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN regulation of clathrin-dependent endocytosis (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog) NW_004955420 12302463 12337976 - 102004391 AGCD01020860;GBDF01285573;XM_005383103;XM_005383108;XM_005383112;XM_005383114;XM_005383118;XM_013513540;XM_013513541;XM_013513542;XM_013513543;XM_013513544;XM_013513545;XM_013513546;XM_013513547;XM_013513548;XM_013513549 XP_005383160;XP_005383165;XP_005383169;XP_005383171;XP_005383175;XP_013368994;XP_013368995;XP_013368996;XP_013368997;XP_013368998;XP_013368999;XP_013369000;XP_013369001;XP_013369002;XP_013369003 MODEL 9040827 protein-coding LOC102004498 cytochrome P450 26A1 NW_004955425 371850 388364 - 102004498 AGCD01025182;GBDF01144580;XM_005385819;XM_005385820;XM_005385821;XM_013514753 XP_005385876;XP_005385877;XP_005385878;XP_013370207 MODEL 8847126 ncrna LOC102009338 uncharacterized LOC102009338 NW_004955403 20129167 20220568 - 102009338 AGCD01002154;XR_259187 MODEL 9029718 protein-coding Tcap titin-cap ENCODES a protein that exhibits BMP binding (ortholog); FATZ binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN adult heart development (ortholog); cardiac muscle cell development (ortholog); cardiac muscle contraction (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2G (ortholog); cardiomyopathy (ortholog); FOUND IN I band (ortholog); titin-telethonin complex (ortholog); Z disc (ortholog) NW_004955451 14413657 14414735 + 102028489 AGCD01043552;GBDI01008088;XM_005394314 XP_005394371 MODEL 8998755 protein-coding Slc22a11 solute carrier family 22 member 11 ENCODES a protein that exhibits prostaglandin transmembrane transporter activity (ortholog); secondary active transmembrane transporter activity (ortholog); solute:inorganic anion antiporter activity (ortholog); INVOLVED IN prostaglandin transport (ortholog); transmembrane transport (ortholog); urate metabolic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); external side of plasma membrane (ortholog) NW_004955422 20582736 20595872 - 102008741 AGCD01023084;GBCQ01008134;XM_005384592;XM_013513819 XP_005384649;XP_013369273 MODEL 8841398 protein-coding Dusp23 dual specificity phosphatase 23 ENCODES a protein that exhibits phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955468 11579624 11581975 + 102008210 AGCD01052135;GBCE01025200;XM_005400175;XM_013522499 XP_005400232;XP_013377953 MODEL 39133620 snrna U4 U4 spliceosomal RNA 8727994 protein-coding Lrrc75a leucine rich repeat containing 75A NW_004955467 1771857 1820707 - 102029844 AGCD01051287;AGCD01051288;AGCD01051289;GBDF01058932;GBDJ01016844;XM_013522211 XP_013377665 MODEL 9056842 protein-coding Gtf2e2 general transcription factor IIE subunit 2 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN RNA polymerase II preinitiation complex assembly (ortholog); transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); genetic disease (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955463 7000868 7080778 - 102025332 AGCD01049709;AGCD01049710;AGCD01049711;GBDJ01236420;GBDK01279604;XM_013521493 XP_013376947 MODEL 8862525 pseudo LOC102019115 sodium-coupled neutral amino acid transporter 5 pseudogene NW_004955559 1182193 1184912 + 102019115 AGCD01073634 MODEL 8978840 protein-coding Fhdc1 FH2 domain containing 1 ENCODES a protein that exhibits actin binding (ortholog); microtubule binding (ortholog); INVOLVED IN cilium assembly (ortholog); Golgi ribbon formation (ortholog); stress fiber assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colorectal cancer (ortholog); FOUND IN cilium (ortholog); cytoplasmic microtubule (ortholog); Golgi apparatus (ortholog) NW_004955471 7368086 7399431 + 102024000 AGCD01053147;AGCD01053148;GBBH01164761;GBDI01261606;XM_013522903 XP_013378357 MODEL 8986370 protein-coding Tut1 terminal uridylyl transferase 1, U6 snRNA-specific ENCODES a protein that exhibits enzyme binding (ortholog); enzyme-substrate adaptor activity (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); histone mRNA catabolic process (ortholog); mRNA 3'-end processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog); nuclear speck (ortholog); nucleolus (ortholog) NW_004955599 596565 606498 + 102016770 AGCD01076661;GBDJ01131428;XM_005414795 XP_005414852 MODEL 8930363 pseudo LOC102025235 DNA-(apurinic or apyrimidinic site) lyase-like NW_004955472 7626486 7627408 - 102025235 AGCD01053624 MODEL 8911348 protein-coding Surf2 surfeit 2 ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); melanoma (ortholog) NW_004955513 2711605 2715667 + 102013438 AGCD01066886;GBCQ01149172;XM_005408430 XP_005408487 MODEL 8832133 protein-coding Tfap2c transcription factor AP-2 gamma ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell differentiation (ortholog); cerebral cortex development (ortholog); dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955445 2626896 2636607 - 102007378 AGCD01039359;AGCD01039360;GBDJ01030904;XM_005392262 XP_005392319 MODEL 8891369 protein-coding Lamb2 laminin subunit beta 2 ENCODES a protein that exhibits integrin binding (ortholog); structural constituent of synapse-associated extracellular matrix (ortholog); INVOLVED IN astrocyte development (ortholog); axon extension involved in regeneration (ortholog); axon guidance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atypical hemolytic-uremic syndrome (ortholog); Breast Cancer, Familial (ortholog); FOUND IN basement membrane (ortholog); laminin trimer (ortholog); laminin-121 trimer (ortholog) NW_004955532 1115412 1127264 - 102009983 AGCD01070165;GBCC01019330;XM_005410192 XP_005410249 MODEL 8858955 protein-coding Gkn1 gastrokine 1 ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); ovarian cyst (ortholog); Stomach Neoplasms (ortholog); FOUND IN extracellular region (ortholog); secretory granule (ortholog) NW_004955424 16046662 16051235 - 102026765 AGCD01024737;XM_013514599 XP_013370053 MODEL 8883967 pseudo LOC102014079 10 kDa heat shock protein, mitochondrial pseudogene NW_004955521 2000294 2000598 + 102014079 AGCD01068200 MODEL 8723546 protein-coding Tspan16 tetraspanin 16 ASSOCIATED WITH sarcoma (ortholog) NW_004955495 2234098 2249884 + 102018409 AGCD01061756;AGCD01061757;AGCD01061758;AGCD01061759;GBDF01001019;GBDF01058236;XM_005405647;XM_005405648 XP_005405704;XP_005405705 MODEL 8962069 ncrna LOC102015974 uncharacterized LOC102015974 NW_004955430 18806239 18827763 + 102015974 AGCD01029701;GBDF01251071;XR_261430 MODEL 8839192 ncrna LOC102020203 uncharacterized LOC102020203 NW_004955407 4537146 4561971 - 102020203 AGCD01006881;AGCD01006882;AGCD01006883;GBDF01039252;XR_001230969;XR_259548 MODEL 8914888 ncrna LOC102012908 uncharacterized LOC102012908 NW_004955444 12340446 12343731 - 102012908 AGCD01039069;GBDK01125336;XR_262259 MODEL 39132907 snrna U6 U6 spliceosomal RNA 8741120 protein-coding Gc GC vitamin D binding protein ENCODES a protein that exhibits actin binding (ortholog); calcidiol binding (ortholog); vitamin D binding (ortholog); INVOLVED IN female pregnancy (ortholog); lactation (ortholog); response to estradiol (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN axon (ortholog); extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955447 1361698 1400633 + 102020622 AGCD01040519;GBDI01295719;XM_005392770;XR_262404 XP_005392827 MODEL 9017066 protein-coding Slc75a1 solute carrier family 75 member 1 ENCODES a protein that exhibits transmembrane transporter activity (ortholog); INVOLVED IN sodium-independent organic anion transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN brush border membrane (ortholog); cytoplasmic vesicle membrane (ortholog); nuclear inner membrane (ortholog) NW_004955514 1813259 1815834 - 102006063 AGCD01067064;GBCQ01003222;GBCQ01003403;XM_013506759 XP_013362213 MODEL 39131426 protein-coding SMIM39 small integral membrane protein 39 8865222 protein-coding LOC102021317 granzyme B-like NW_004955409 35631253 35633975 + 102021317 AGCD01010427;GBDJ01147919;XM_005376985 XP_005377042 MODEL 8721033 ncrna LOC102009735 uncharacterized LOC102009735 NW_004955500 4775193 4791358 - 102009735 AGCD01063811;GBDF01219713;XR_001231484;XR_001231485;XR_001231486 MODEL 8907847 protein-coding Taf9b TATA-box binding protein associated factor 9b INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell growth (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN transcription factor TFIID complex (ortholog); transcription factor TFTC complex (ortholog) NW_004955557 1607589 1617748 - 102021713 AGCD01073300;GBCQ01153750;XM_005412631 XP_005412688 MODEL 9042866 protein-coding LOC102003769 protein NipSnap homolog 3A-like NW_004955419 21692598 21700920 - 102003769 AGCD01020281;GBCB01039739;GBDK01115357;XM_013513175 XP_013368629 MODEL 8936684 protein-coding Exo5 exonuclease 5 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); single-stranded DNA 5'-3' DNA exonuclease activity (ortholog); INVOLVED IN interstrand cross-link repair (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955537 328608 334559 + 102027456 AGCD01070861;AGCD01070862;GBDF01041249;XM_005410561;XM_005410569;XM_005410570;XM_013507800;XM_013507801;XM_013507802;XM_013507803 XP_005410618;XP_005410626;XP_005410627;XP_013363254;XP_013363255;XP_013363256;XP_013363257 MODEL 39133130 snrna U6 U6 spliceosomal RNA 8908625 pseudo LOC102023088 ferritin light chain pseudogene NW_004955446 12914277 12915113 - 102023088 AGCD01040245;XM_005392715 MODEL 8724121 protein-coding LOC102022037 serine protease 55-like NW_004955403 52114823 52124047 - 102022037 AGCD01003001;AGCD01003002;GBDF01002536;XM_013514424;XM_013514426;XM_013514430 XP_013369878;XP_013369880;XP_013369884 MODEL 9023519 protein-coding LOC102010505 olfactory receptor 5A1 NW_004955511 3947526 3953543 + 102010505 AGCD01066484;XM_005408061 XP_005408118 MODEL 8831700 protein-coding Khnyn KH and NYN domain containing ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955409 35871214 35880233 - 102025660 AGCD01010435;GBBH01092218;XM_005376998;XM_005376999;XR_001232667 XP_005377055;XP_005377056 MODEL 8754508 protein-coding LOC102025236 olfactory receptor 11L1-like NW_004955473 3784391 3785317 - 102025236 AGCD01053938;XM_005401295 XP_005401352 MODEL 8865674 pseudo LOC102012558 non-histone chromosomal protein HMG-17 pseudogene NW_004955426 25793912 25801578 + 102012558 AGCD01026728 MODEL 8762274 protein-coding Nr4a2 nuclear receptor subfamily 4 group A member 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); nuclear glucocorticoid receptor binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cellular response to corticotropin-releasing hormone stimulus (ortholog); cellular response to oxidative stress (ortholog); PARTICIPATES IN Parkinson's disease pathway; ASSOCIATED WITH Animal Toxoplasmosis (ortholog); Arsenic Poisoning (ortholog); autism spectrum disorder (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955449 16928780 16944536 + 102018667 AGCD01042232;AGCD01042233;GBDK01114828;XM_005393416;XM_005393417;XM_005393418;XM_005393419;XM_013518806;XR_001235828 XP_005393473;XP_005393474;XP_005393475;XP_005393476;XP_013374260 MODEL 8753175 protein-coding Dmac2l distal membrane arm assembly component 2 like ASSOCIATED WITH lung cancer (ortholog); melanoma (ortholog); stomach cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955409 12473891 12485066 - 102024312 AGCD01009549;GBCB01056134;XM_005376828;XM_005376829;XM_013510335 XP_005376885;XP_005376886;XP_013365789 MODEL 8850610 protein-coding Lime1 Lck interacting transmembrane adaptor 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); regulation of canonical NF-kappaB signal transduction (ortholog); regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN B cell receptor complex (ortholog) NW_004955528 490319 492943 - 102006278 AGCD01069536;GBCQ01125791;XM_005409949;XM_005409950;XM_005409951;XM_013507446;XM_013507447;XM_013507448 XP_005410006;XP_005410007;XP_005410008;XP_013362900;XP_013362901;XP_013362902 MODEL 8700292 protein-coding Bmpr2 bone morphogenetic protein receptor type 2 ENCODES a protein that exhibits activin receptor activity, type II (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); aortic valve development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); Brain Injuries (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); axon (ortholog) NW_004955457 12235780 12315680 - 102004042 AGCD01047005;AGCD01047006;GBCB01060551;GBDF01280157;XM_013520738 XP_013376192 MODEL 8783750 protein-coding Gkn2 gastrokine 2 INVOLVED IN gene expression (ortholog); inflammatory response (ortholog); neutrophil activation involved in immune response (ortholog); FOUND IN basal part of cell (ortholog) NW_004955424 16071246 16078008 + 102018109 AGCD01024737;XM_005385654 XP_005385711 MODEL 8904118 pseudo LOC102017915 60S ribosomal protein L22-like NW_004955439 5269080 5272255 + 102017915 AGCD01035727 MODEL 8917671 protein-coding Scg3 secretogranin III INVOLVED IN protein localization to secretory granule (ortholog); ASSOCIATED WITH high grade glioma (ortholog); Metabolic Syndrome (ortholog); sarcoma (ortholog); FOUND IN extracellular region (ortholog); secretory granule membrane (ortholog) NW_004955409 2876355 2907363 - 102022052 AGCD01009225;GBBH01142861;GBCE01123365;XM_005376640 XP_005376697 MODEL 8954226 pseudo LOC102003435 olfactory receptor 2AG2-like NW_004955414 22564831 22565788 - 102003435 AGCD01015463 MODEL 8750168 protein-coding Rab11fip2 RAB11 family interacting protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); protein kinase binding (ortholog); INVOLVED IN establishment of cell polarity (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); phagocytosis (ortholog); PARTICIPATES IN vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN endosome (ortholog); phagocytic cup (ortholog) NW_004955431 22637605 22674107 - 102030657 AGCD01030516;GBBH01043971;GBCB01073562;XM_005387876 XP_005387933 MODEL 8906727 protein-coding Slc7a1 solute carrier family 7 member 1 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); basic amino acid transmembrane transporter activity (ortholog); L-arginine transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); L-amino acid transport (ortholog); L-arginine import across plasma membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955431 16270648 16315280 + 102025151 AGCD01030377;GBDF01154497;XM_005387753;XM_013515883;XM_013515884 XP_005387810;XP_013371337;XP_013371338 MODEL 8728732 pseudo LOC102005210 bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA pseudogene NW_004955403 36749260 36750838 + 102005210 AGCD01002547 MODEL 9060849 protein-coding Sacs sacsin molecular chaperone ENCODES a protein that exhibits Hsp70 protein binding (ortholog); identical protein binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN negative regulation of inclusion body assembly (ortholog); ASSOCIATED WITH Arachnoid Cysts (ortholog); Ataxia (ortholog); ATAXIA, SPASTIC, CHILDHOOD-ONSET, AUTOSOMAL RECESSIVE, WITH OPTIC ATROPHY AND MENTAL RETARDATION (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955497 3701515 3752627 - 102016491 AGCD01062552;AGCD01062553;GBCB01097721;GBCE01012315;XM_005406316 XP_005406373 MODEL 8824275 pseudo LOC102018737 dnaJ homolog subfamily A member 1-like NW_004955489 1322766 1323948 - 102018737 AGCD01059836 MODEL 8959132 protein-coding Tfap2d transcription factor AP-2 delta ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN inferior colliculus development (ortholog); negative regulation of neuron apoptotic process (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955411 7219474 7276350 - 102004257 AGCD01011699;AGCD01011700;XM_005377665 XP_005377722 MODEL 8750965 protein-coding Il18bp interleukin 18 binding protein ENCODES a protein that exhibits interleukin-18 binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to tumor necrosis factor (ortholog); response to lipopolysaccharide (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); allergic contact dermatitis (ortholog); arteriosclerosis (ortholog); FOUND IN decoy receptor complex (ortholog); extracellular region (ortholog) NW_004955414 19327828 19332577 - 102006332 AGCD01015312;GBDI01016320;XM_005380020;XM_005380021;XM_005380022 XP_005380077;XP_005380078;XP_005380079 MODEL 10344678 ncrna LOC106147310 uncharacterized LOC106147310 NW_004955542 1097501 1117710 - 106147310 AGCD01071489;GBBH01194362;XR_001232148 MODEL 39132752 snrna U6 U6 spliceosomal RNA 8879931 pseudo LOC102022038 nucleophosmin pseudogene NW_004955403 53663363 53664371 + 102022038 AGCD01003067 MODEL 8860210 protein-coding LOC102014081 vomeronasal type-2 receptor 116-like NW_004955524 3713189 3734931 + 102014081 AGCD01068924;AGCD01068925;XM_013507199 XP_013362653 MODEL 9064649 protein-coding LOC102015975 olfactory receptor 10AG1-like NW_004955511 5038953 5039909 - 102015975 AGCD01066544;XM_005408281 XP_005408338 MODEL 8939787 pseudo LOC102025240 ATP-binding cassette sub-family A member 8-B-like NW_004955478 3891326 3947184 + 102025240 AGCD01055834;AGCD01055835;AGCD01055836;XM_005402290 MODEL 39132222 snrna U6 U6 spliceosomal RNA 8897052 protein-coding Tcea1 transcription elongation factor A1 ENCODES a protein that exhibits transcription elongation factor activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN nucleoplasm (ortholog); transcription factor TFIID complex (ortholog) NW_004955454 13312823 13347128 - 102005666 AGCD01045432;GBCE01031806;GBDF01136217;XM_013520183;XM_013520184 XP_013375637;XP_013375638 MODEL 39132908 snrna U6 U6 spliceosomal RNA 8863922 protein-coding Dusp26 dual specificity phosphatase 26 ENCODES a protein that exhibits p53 binding (ortholog); phosphoprotein phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell adhesion (ortholog); ASSOCIATED WITH lung adenocarcinoma (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) NW_004955463 9712943 9718959 - 102008926 AGCD01049796;GBCB01005948;GBCQ01009430;XM_005398407 XP_005398464 MODEL 39133621 snrna U4 U4 spliceosomal RNA 8765834 protein-coding Gca grancalcin ENCODES a protein that exhibits calcium ion binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955449 11503201 11538809 - 102017289 AGCD01042091;GBBH01101864;XM_013518747;XM_013518748;XM_013518749;XM_013518750 XP_013374201;XP_013374202;XP_013374203;XP_013374204 MODEL 8910490 protein-coding Gtf2f1 general transcription factor IIF subunit 1 ENCODES a protein that exhibits phosphatase activator activity (ortholog); promoter-specific chromatin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); response to virus (ortholog); transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955495 3208334 3217460 + 102012335 AGCD01061837;AGCD01061838;GBDI01011557;XM_013505309 XP_013360763 MODEL 9001349 pseudo LOC102003773 60S ribosomal protein L27a pseudogene NW_004955491 6023903 6024578 + 102003773 AGCD01060512 MODEL 8858689 protein-coding Tafa1 TAFA chemokine like family member 1 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN neuroblast differentiation (ortholog); regulation of neuroblast proliferation (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog) NW_004955421 19249435 19734903 - 102014679 AGCD01022070;AGCD01022071;AGCD01022072;AGCD01022073;AGCD01022074;AGCD01022075;AGCD01022076;AGCD01022077;AGCD01022078;GBDK01272788;XM_005383817;XM_005383818 XP_005383874;XP_005383875 MODEL 8850638 ncrna LOC102007811 uncharacterized LOC102007811 NW_004955436 506358 507779 - 102007811 AGCD01033545;GBCB01129963;XR_261734 MODEL 8739035 protein-coding Tut4 terminal uridylyl transferase 4 ENCODES a protein that exhibits miRNA binding (ortholog); RNA uridylyltransferase activity (ortholog); uridylyltransferase activity (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); interleukin-6-mediated signaling pathway (ortholog); miRNA catabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) NW_004955464 6610350 6734606 + 102017754 AGCD01050035;AGCD01050036;AGCD01050037;AGCD01050038;GBDF01123217;XM_005398575;XM_005398576;XM_005398577;XM_005398578;XM_005398579;XM_013521699 XP_005398632;XP_005398633;XP_005398634;XP_005398635;XP_005398636;XP_013377153 MODEL 39132224 snrna U6 U6 spliceosomal RNA 8985349 protein-coding Sipa1l1 signal induced proliferation associated 1 like 1 ENCODES a protein that exhibits actin filament binding (ortholog); ephrin receptor binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); ephrin receptor signaling pathway (ortholog); postsynaptic actin cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) NW_004955523 3545807 3908329 - 102005837 AGCD01068616;AGCD01068617;AGCD01068618;AGCD01068619;AGCD01068620;AGCD01068621;AGCD01068622;GBDF01128061;XM_005409444;XM_005409446;XM_005409448;XM_005409449;XM_005409450;XM_013507169;XR_264641 XP_005409501;XP_005409503;XP_005409505;XP_005409506;XP_005409507;XP_013362623 MODEL 730469015 misc_rna XIST_intron XIST 3' intron conserved motif 8721093 ncrna LOC102010512 uncharacterized LOC102010512 NW_004955432 10654891 10664188 - 102010512 AGCD01030936;GBCE01078510;XR_001234668;XR_261522 MODEL 8881396 protein-coding Tspan17 tetraspanin 17 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN establishment of protein localization to organelle (ortholog); protein maturation (ortholog); regulation of membrane protein ectodomain proteolysis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955408 28914392 28924352 + 102016239 AGCD01008734;GBCQ01039281;XM_005376397;XM_013509645;XM_013509648;XM_013509649 XP_005376454;XP_013365099;XP_013365102;XP_013365103 MODEL 8705219 pseudo LOC102018738 reactive oxygen species modulator 1 pseudogene NW_004955493 7585489 7586094 - 102018738 AGCD01061202;XM_005405270 MODEL 8998229 protein-coding CUNH9orf85 chromosome unknown C9orf85 homolog ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955434 1208236 1261788 - 102020156 AGCD01032059;GBDK01324388;XM_005388520;XM_013516345 XP_005388577;XP_013371799 MODEL 8906889 protein-coding Khsrp KH-type splicing regulatory protein ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to cytokine stimulus (ortholog); miRNA metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasmic stress granule (ortholog); dendrite (ortholog); neuronal cell body (ortholog) NW_004955495 3183083 3194356 + 102005058 AGCD01061833;AGCD01061834;AGCD01061835;GBBH01090066;GBCE01075167;XM_013505308 XP_013360762 MODEL 8914562 protein-coding Sae1 SUMO1 activating enzyme subunit 1 ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); protein heterodimerization activity (ortholog); small protein activating enzyme binding (ortholog); INVOLVED IN positive regulation of protein localization to mitochondrion (ortholog); positive regulation of protein sumoylation (ortholog); protein sumoylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); SUMO activating enzyme complex (ortholog) NW_004955574 1090446 1158266 + 102005089 AGCD01075153;AGCD01075154;AGCD01075155;AGCD01075156;AGCD01075157;AGCD01075158;GBDF01002543;XM_005413849 XP_005413906 MODEL 8919715 ncrna LOC102012909 uncharacterized LOC102012909 NW_004955445 3519216 3530963 + 102012909 AGCD01039396;GBDF01083032;XR_262300 MODEL 9041985 protein-coding LOC102020204 low affinity sodium-glucose cotransporter-like NW_004955455 6532784 6667672 - 102020204 AGCD01045801;AGCD01045802;AGCD01045803;GBDF01138871;XM_013520389;XM_013520390 XP_013375843;XP_013375844 MODEL 8898464 ncrna LOC102021318 uncharacterized LOC102021318 NW_004955410 18989630 19019952 + 102021318 AGCD01011016;GBCB01067072;XR_259849 MODEL 8835872 protein-coding Gla galactosidase alpha ENCODES a protein that exhibits alpha-galactosidase activity (ortholog); catalytic activity (ortholog); galactoside binding (ortholog); INVOLVED IN aorta development (ortholog); bone mineralization (ortholog); glycosphingolipid catabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH angiokeratoma (ortholog); cardiomyopathy (ortholog); Fabry disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955503 7526077 7535817 - 102026892 AGCD01064795;GBDK01072048;XM_005406953 XP_005407010 MODEL 8799917 protein-coding Surf4 surfeit 4 ENCODES a protein that exhibits cargo receptor activity (ortholog); COPII receptor activity (ortholog); INVOLVED IN COPII-coated vesicle cargo loading (ortholog); early endosome to Golgi transport (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN COPII-coated ER to Golgi transport vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog) NW_004955513 2715638 2719537 - 102012886 AGCD01066886;GBBH01032197;GBCE01029533;XM_013506697 XP_013362151 MODEL 9060906 protein-coding Smim4 small integral membrane protein 4 ENCODES a protein that exhibits mitochondrial ribosome binding (ortholog); INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004956313 1988 5240 + 102016773 AGCD01079416;GBDI01135702;XM_005415191 XP_005415248 MODEL 8740818 pseudo LOC102003437 probable asparagine--tRNA ligase, mitochondrial pseudogene NW_004955414 18585477 18586305 + 102003437 AGCD01015285 MODEL 8939665 protein-coding LOC102017919 olfactory receptor 11G2-like NW_004955550 885332 886303 - 102017919 AGCD01072528;XM_005412039 XP_005412096 MODEL 8956289 protein-coding Exoc1 exocyst complex component 1 INVOLVED IN embryo implantation (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955447 15049087 15100628 - 102029915 AGCD01041032;GBDJ01190754;XM_005392876;XM_005392877;XM_005392879;XM_005392880;XM_005392881;XM_013518548;XM_013518549;XM_013518550 XP_005392933;XP_005392934;XP_005392936;XP_005392937;XP_005392938;XP_013374002;XP_013374003;XP_013374004 MODEL 39132912 snrna U6 U6 spliceosomal RNA 8940539 protein-coding Tcea2 transcription elongation factor A2 INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955528 186642 194058 - 102024045 AGCD01069514;GBCQ01100458;XM_005409909 XP_005409966 MODEL 8719141 protein-coding LOC102009339 netrin receptor UNC5D-like NW_004955775 2794 4739 - 102009339 AGCD01078325;GBBH01098166;XM_005415109 XP_005415166 MODEL 9067327 protein-coding LOC102005211 mRNA cap guanine-N7 methyltransferase NW_004956021 841 8406 + 102005211 AGCD01078894;GBCC01050559;XM_013510215 XP_013365669 MODEL 8939722 protein-coding Tnks tankyrase ENCODES a protein that exhibits histone binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN cellular response to nutrient (ortholog); negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric (ortholog); negative regulation of telomere maintenance via telomere lengthening (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955463 5589194 5770141 + 102020894 AGCD01049641;AGCD01049642;AGCD01049643;AGCD01049644;GBDF01044672;XM_005398362 XP_005398419 MODEL 8773541 protein-coding Nr4a3 nuclear receptor subfamily 4 group A member 3 ENCODES a protein that exhibits cAMP response element binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN adult behavior (ortholog); animal organ regeneration (ortholog); axon guidance (ortholog); ASSOCIATED WITH extraskeletal myxoid chondrosarcoma (ortholog); Hypercholesterolemia (ortholog); Insulin Resistance (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955419 25779368 25817445 - 102015014 AGCD01020392;AGCD01020393;GBDJ01217586;XM_005382819;XM_005382820;XM_013513314;XM_013513315 XP_005382876;XP_005382877;XP_013368768;XP_013368769 MODEL 8773277 protein-coding Dmap1 DNA methyltransferase 1 associated protein 1 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of protein import into nucleus (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cognitive Dysfunction (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NuA4 histone acetyltransferase complex (ortholog) NW_004955464 13984748 13993411 - 102018699 AGCD01050298;GBCQ01093703;XM_005398766 XP_005398823 MODEL 8939595 protein-coding Lrrc75b leucine rich repeat containing 75B NW_004955455 8068573 8074399 - 102015284 AGCD01045872;GBBH01208958;GBCE01155527;XM_013520451 XP_013375905 MODEL 8838914 protein-coding LOC102009342 translation initiation factor IF-2-like NW_004955404 10719070 10720405 + 102009342 AGCD01003391;GBDF01220559;XM_005374052 XP_005374109 MODEL 8716919 protein-coding LOC102019119 zinc finger protein 501-like NW_004955569 1687711 1702017 + 102019119 AGCD01074676;AGCD01074677;XM_013509378 XP_013364832 MODEL 39133131 snrna U6 U6 spliceosomal RNA 8832805 protein-coding Bms1 BMS1 ribosome biogenesis factor INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH cervical cancer (ortholog); ectodermal dysplasia (ortholog); esophageal cancer (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955546 1054208 1089048 + 102004325 AGCD01072039;AGCD01072040;GBDF01089574;XM_005411758;XM_005411759;XM_005411761 XP_005411815;XP_005411816;XP_005411818 MODEL 8885594 ncrna LOC102010513 uncharacterized LOC102010513 NW_004955518 2093768 2169658 - 102010513 AGCD01067771;GBDI01245852;XR_001231842;XR_001231843;XR_001231844;XR_001231845;XR_001231846;XR_001231847;XR_001231848;XR_264567 MODEL 9023862 protein-coding Scg5 secretogranin V ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); INVOLVED IN intracellular protein transport (ortholog); peptide hormone processing (ortholog); regulation of hormone secretion (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Colorectal Neoplasms (ortholog); medulloblastoma (ortholog); FOUND IN extracellular region (ortholog); nucleus (ortholog); secretory granule (ortholog) NW_004955416 1867848 1914505 - 102027844 AGCD01016841;GBDI01262713;XM_005381176;XM_005381177 XP_005381233;XP_005381234 MODEL 8755060 pseudo LOC102023090 protein N-terminal glutamine amidohydrolase pseudogene NW_004955449 3894076 3895493 + 102023090 AGCD01041870 MODEL 8941932 protein-coding Fhip1a FHF complex subunit HOOK interacting protein 1A INVOLVED IN protein localization to perinuclear region of cytoplasm (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog) NW_004955471 5985150 6229720 + 102024555 AGCD01053116;AGCD01053117;AGCD01053118;AGCD01053119;AGCD01053120;AGCD01053121;AGCD01053122;GBCB01023762;XM_013522889;XM_013522890;XM_013522891;XM_013522892;XM_013522893 XP_013378343;XP_013378344;XP_013378345;XP_013378346;XP_013378347 MODEL 8768729 protein-coding Slc7a10 solute carrier family 7 member 10 ENCODES a protein that exhibits neutral L-amino acid transmembrane transporter activity (ortholog); INVOLVED IN D-alanine transmembrane transport (ortholog); D-serine transmembrane transport (ortholog); glycine transport (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN apical dendrite (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) NW_004955468 2968720 2984101 - 102025896 AGCD01051849;GBDI01219332;XM_005399981;XM_005399982 XP_005400038;XP_005400039 MODEL 8814120 pseudo LOC102004499 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955500 2984102 2984589 + 102004499 AGCD01063724 MODEL 9023746 ncrna LOC102023093 uncharacterized LOC102023093 NW_004955402 46979980 47001260 + 102023093 AGCD01001170;GBDF01162629;XR_259095;XR_259096 MODEL 8853523 ncrna LOC102012559 uncharacterized LOC102012559 NW_004955427 8687167 8694960 + 102012559 AGCD01027076;GBDF01110884;XR_001234415;XR_261242 MODEL 8810142 protein-coding Lamb3 laminin subunit beta 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); endodermal cell differentiation (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1A (ortholog); autistic disorder (ortholog); FOUND IN basement membrane (ortholog); laminin-332 trimer (ortholog) NW_004955489 2547611 2603079 + 102024688 AGCD01059872;GBCQ01088494;XM_005404541;XM_005404542;XM_005404543 XP_005404598;XP_005404599;XP_005404600 MODEL 10353069 ncrna LOC106147311 uncharacterized LOC106147311 NW_004955542 985379 996371 + 106147311 AGCD01071487;GBCE01162545;XR_001232149;XR_001232150;XR_001232151;XR_001232152;XR_001232153 MODEL 39132228 snrna U6 U6 spliceosomal RNA 8924667 protein-coding Il18r1 interleukin 18 receptor 1 ENCODES a protein that exhibits interleukin-18 binding (ortholog); interleukin-18 receptor activity (ortholog); INVOLVED IN interleukin-18-mediated signaling pathway (ortholog); natural killer cell activation (ortholog); negative regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH aortic dissection (ortholog); asthma (ortholog); autoimmune disease (ortholog); FOUND IN interleukin-18 receptor complex (ortholog); membrane (ortholog) NW_004955470 7854995 7887810 + 102020793 AGCD01052814;AGCD01052815;GBBH01123228;XM_005400769;XM_005400770;XM_013522841 XP_005400826;XP_005400827;XP_013378295 MODEL 8839266 protein-coding Tut7 terminal uridylyl transferase 7 ENCODES a protein that exhibits miRNA binding (ortholog); RNA uridylyltransferase activity (ortholog); uridylyltransferase activity (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); miRNA metabolic process (ortholog); oocyte maturation (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955432 1268217 1330385 + 102023287 AGCD01030591;AGCD01030592;GBDF01085558;XM_005387913;XM_005387914;XM_005387915;XM_013516018;XM_013516019 XP_005387970;XP_005387971;XP_005387972;XP_013371472;XP_013371473 MODEL 8719339 ncrna LOC102014084 uncharacterized LOC102014084 NW_004955437 20958744 20959376 - 102014084 AGCD01034893;GBDF01307365;XR_261899 MODEL 8836229 protein-coding Xk X-linked Kx blood group antigen, Kell and VPS13A binding protein ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); intracellular magnesium ion homeostasis (ortholog); myelination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arthralgia (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955587 668871 725829 + 102011713 AGCD01076069;GBCB01097779;XM_005414450 XP_005414507 MODEL 9065987 pseudo LOC102015977 zinc finger protein 14-like NW_004955432 4626616 4648702 + 102015977 AGCD01030733 MODEL 10289125 protein-coding Tspan18 tetraspanin 18 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); calcium-mediated signaling (ortholog); hemostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cell periphery (ortholog) NW_004955422 2833124 2871460 - 106146238 AGCD01022495;XM_013514197;XM_013514198 XP_013369651;XP_013369652 MODEL 39133622 snrna U4 U4 spliceosomal RNA 8864422 protein-coding Safb scaffold attachment factor B ENCODES a protein that exhibits chromatin binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN estrogen receptor signaling pathway (ortholog); hormone metabolic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN midbody (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955495 3743673 3775073 - 102026440 AGCD01061879;GBDK01009759;XM_005405765;XM_005405766 XP_005405822;XP_005405823 MODEL 8987813 pseudo LOC102021323 BTB/POZ domain-containing protein KCTD2-like NW_004955464 12405610 12412983 - 102021323 AGCD01050195;AGCD01050196 MODEL 8908379 protein-coding Gcat glycine C-acetyltransferase PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrion (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955413 24184997 24192178 + 102011102 AGCD01014355;GBDJ01317225;XM_005379228 XP_005379285 MODEL 39133132 snrna U6 U6 spliceosomal RNA 8859453 protein-coding Gtf2f2 general transcription factor IIF subunit 2 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); RNA polymerase II preinitiation complex assembly (ortholog); transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN microtubule cytoskeleton (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955518 2912259 3064298 + 102013749 AGCD01067788;AGCD01067789;AGCD01067790;GBDK01133218;XM_005409084 XP_005409141 MODEL 8724078 protein-coding Dusp28 dual specificity phosphatase 28 ENCODES a protein that exhibits phosphatase activity (ortholog); ASSOCIATED WITH multiple sclerosis (ortholog) NW_004955542 909239 911139 - 102018333 AGCD01071484;AGCD01071485;GBBH01102815;XM_005411166 XP_005411223 MODEL 8938081 protein-coding Slc22a12 solute carrier family 22 member 12 ENCODES a protein that exhibits PDZ domain binding (ortholog); urate transmembrane transporter activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); renal urate salt excretion (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); clear cell renal cell carcinoma (ortholog); Congenital Abnormalities (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); membrane (ortholog) NW_004955422 20555458 20561818 - 102007566 AGCD01023083;GBCQ01008135;XM_005384586;XM_005384588;XM_005384590 XP_005384643;XP_005384645;XP_005384647 MODEL 8789428 protein-coding Tfap2e transcription factor AP-2 epsilon ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); carcinoma (ortholog) NW_004955452 13666712 13682063 + 102021204 AGCD01044431;GBDF01136960;XM_005395152 XP_005395209 MODEL 8851192 protein-coding Exoc2 exocyst complex component 2 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); protein kinase binding (ortholog); small GTPase binding (ortholog); INVOLVED IN Golgi to plasma membrane transport (ortholog); regulation of entry of bacterium into host cell (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amelogenesis imperfecta type 1F (ortholog); Breast Cancer, Familial (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary base (ortholog); ciliary shaft (ortholog) NW_004955465 12327423 12457171 + 102029602 AGCD01050546;AGCD01050547;AGCD01050548;GBCB01028772;XM_005398935;XM_013521838 XP_005398992;XP_013377292 MODEL 8918608 pseudo LOC102022041 eukaryotic initiation factor 4A-II pseudogene NW_004955404 24517244 24519261 + 102022041 AGCD01003820 MODEL 9042421 ncrna LOC102009736 uncharacterized LOC102009736 NW_004955425 27635177 27653923 + 102009736 AGCD01025978;GBDJ01039065;XR_001234273;XR_261177 MODEL 8732373 protein-coding Limk1 LIM domain kinase 1 ENCODES a protein that exhibits heat shock protein binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN positive regulation of actin filament bundle assembly (ortholog); positive regulation of axon extension (ortholog); positive regulation of stress fiber assembly (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN axonal growth cone (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955456 13751135 13773722 - 102020206 AGCD01046617;AGCD01046618;GBCB01130874;GBCE01065465;XM_013520581 XP_013376035 MODEL 8989693 pseudo LOC102025241 U6 snRNA-associated Sm-like protein LSm3 pseudogene NW_004955480 8692235 8697603 - 102025241 AGCD01056730 MODEL 8844985 pseudo LOC102012564 zinc finger CCHC domain-containing protein 9-like NW_004955506 4557255 4572734 + 102012564 AGCD01065339;AGCD01065340 MODEL 9043370 protein-coding Il18rap interleukin 18 receptor accessory protein ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-18 receptor activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH aortic dissection (ortholog); Bronchial Hyperreactivity (ortholog); hepatocellular carcinoma (ortholog); FOUND IN interleukin-18 receptor complex (ortholog); plasma membrane (ortholog) NW_004955470 7894900 7923653 + 102021331 AGCD01052816;GBDI01059444;XM_005400771;XM_005400772;XM_013522677 XP_005400828;XP_005400829;XP_013378131 MODEL 8708085 protein-coding Nr5a1 nuclear receptor subfamily 5 group A member 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN adrenal gland development (ortholog); calcineurin-mediated signaling (ortholog); cell differentiation (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); 46, XY Disorders of Sex Development (ortholog); 46,XX sex reversal 4 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955419 3632248 3654367 + 102023700 AGCD01019730;AGCD01019731;AGCD01019732;GBDF01156391;XM_005382492;XM_005382493 XP_005382549;XP_005382550 MODEL 8982872 protein-coding Xkr4 XK related 4 ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); INVOLVED IN phosphatidylserine exposure on apoptotic cell surface (ortholog); ASSOCIATED WITH melanoma (ortholog); Mesothelioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955454 14311466 14704334 + 102006978 AGCD01045469;AGCD01045470;AGCD01045471;AGCD01045472;AGCD01045473;AGCD01045474;AGCD01045475;AGCD01045476;GBBH01053233;XM_005396125 XP_005396182 MODEL 8774859 protein-coding Rab11fip3 RAB11 family interacting protein 3 ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN endocytic recycling (ortholog); Golgi to plasma membrane protein transport (ortholog); negative regulation of adiponectin secretion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cleavage furrow (ortholog); endocytic vesicle membrane (ortholog) NW_004955442 16678136 16760663 - 102027239 AGCD01037905;AGCD01037906;AGCD01037907;AGCD01037908;AGCD01037909;GBBH01228926;GBDJ01230394;XM_013517818;XM_013517819 XP_013373272;XP_013373273 MODEL 8953752 protein-coding Glb1 galactosidase beta 1 ENCODES a protein that exhibits beta-galactosidase activity (ortholog); galactoside binding (ortholog); hydrolase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); galactose catabolic process (ortholog); ganglioside catabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH Otitis Media with Effusion; ARTERIAL DISSECTION (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); lysosome (ortholog) NW_004955421 230957 311504 - 102016922 AGCD01021552;AGCD01021553;AGCD01021554;AGCD01021555;AGCD01021556;GBDF01080023;GBDK01129488;XM_005383635 XP_005383692 MODEL 9037096 protein-coding Scgb1a1 secretoglobin family 1A member 1 ENCODES a protein that exhibits polychlorinated biphenyl binding (ortholog); INVOLVED IN negative regulation of interleukin-13 production (ortholog); negative regulation of interleukin-4 production (ortholog); negative regulation of interleukin-5 production (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); allergic rhinitis (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nuclear envelope (ortholog) NW_004955599 688414 690644 - 102017937 AGCD01076666;GBDK01226803;XM_005414799;XM_005414800;XM_013510070 XP_005414856;XP_005414857;XP_013365524 MODEL 8784604 pseudo LOC102021324 60S ribosomal protein L23a pseudogene NW_004955411 28661333 28675617 + 102021324 AGCD01012223;AGCD01012224;AGCD01012225 MODEL 8851310 ncrna LOC102003439 uncharacterized LOC102003439 NW_004955415 12033874 12040445 - 102003439 AGCD01016183;GBDF01015290;XR_001233199 MODEL 8728497 ncrna LOC102017922 uncharacterized LOC102017922 NW_004955557 454172 479709 - 102017922 AGCD01073244;GBDI01153372;XR_001232319;XR_264980 MODEL 39132913 snrna U6 U6 spliceosomal RNA 8803378 protein-coding Sipa1l2 signal induced proliferation associated 1 like 2 INVOLVED IN presynaptic signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density, intracellular component (ortholog); presynapse (ortholog) NW_004955492 6611430 6709016 + 102004492 AGCD01060770;AGCD01060771;GBDF01252947;XM_013504726;XM_013504727;XM_013504728;XM_013504729 XP_013360180;XP_013360181;XP_013360182;XP_013360183 MODEL 10127665 ncrna LOC106147312 uncharacterized LOC106147312 NW_004955542 2001157 2015162 + 106147312 AGCD01071510;GBDJ01356675;XR_001232154 MODEL 8956589 protein-coding LOC102012915 uncharacterized LOC102012915 NW_004955450 14986194 14993012 + 102012915 AGCD01042775;GBDF01058226;XM_013518836 XP_013374290 MODEL 8977070 ncrna LOC102020209 uncharacterized LOC102020209 NW_004955457 10030162 10042819 + 102020209 AGCD01046947;GBCQ01035883;XR_262930 MODEL 8935078 protein-coding Dusp29 dual specificity phosphatase 29 ENCODES a protein that exhibits MAP kinase phosphatase activity (ortholog); protein homodimerization activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); muscle cell differentiation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955437 17002269 17037750 + 102028894 AGCD01034729;AGCD01034730;GBBH01060435;XM_013517070;XM_013517071;XM_013517072;XM_013517073;XM_013517074 XP_013372524;XP_013372525;XP_013372526;XP_013372527;XP_013372528 MODEL 9024008 pseudo LOC102009346 ribosome biogenesis protein BRX1 homolog pseudogene NW_004955453 6480308 6481349 + 102009346 AGCD01044720 MODEL 9000649 ncrna LOC102003774 uncharacterized LOC102003774 NW_004955422 13750163 13762795 - 102003774 AGCD01022838;GBCB01073765;XR_001233882;XR_001233883;XR_260871;XR_260872 MODEL 8727744 pseudo LOC102019123 arylacetamide deacetylase-like NW_004955448 3049316 3050504 + 102019123 AGCD01041301 MODEL 39131533 protein-coding TAFA2 TAFA chemokine like family member 2 9057926 ncrna LOC102010517 uncharacterized LOC102010517 NW_004955530 2532397 2639683 + 102010517 AGCD01069921;AGCD01069922;AGCD01069923;AGCD01069924;AGCD01069925;AGCD01069926;AGCD01069927;GBDF01160127;XR_001231996;XR_001231997;XR_001231998;XR_264710 MODEL 8904983 protein-coding LOC102007821 N-formyl peptide receptor 2 NW_004955558 780076 787914 - 102007821 AGCD01073389;AGCD01073390;GBDI01325712;XM_005412670;XM_013508870;XM_013508871 XP_005412727;XP_013364324;XP_013364325 MODEL 8961934 protein-coding Surf6 surfeit 6 ENCODES a protein that exhibits DNA binding (ortholog); molecular condensate scaffold activity (ortholog); RNA binding (ortholog); INVOLVED IN ribosome biogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); granular component (ortholog); nucleolus (ortholog) NW_004955513 2691648 2696018 - 102011350 AGCD01066886;GBDI01136360;XM_005408424 XP_005408481 MODEL 39132753 snrna U6 U6 spliceosomal RNA 8805108 protein-coding Fhip1b FHF complex subunit HOOK interacting protein 1B INVOLVED IN early endosome to late endosome transport (ortholog); endosome organization (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN FHF complex (ortholog) NW_004955414 21954103 21977877 - 102015503 AGCD01015438;GBBH01102313;XM_005380117;XM_005380119;XM_005380121;XM_013512031 XP_005380174;XP_005380176;XP_005380178;XP_013367485 MODEL 9023046 pseudo LOC102023096 zinc finger CCCH domain-containing protein 15 pseudogene NW_004955402 18254821 18256134 - 102023096 AGCD01000528 MODEL 9001436 protein-coding LOC102005212 regulator of G-protein signaling 12-like NW_004957078 697 1275 - 102005212 AGCD01080474;GBCE01118568;GBCE01118569;XM_005415222 XP_005415279 MODEL 8703224 pseudo LOC102018739 non-histone chromosomal protein HMG-14 pseudogene NW_004955422 17353812 17357226 + 102018739 AGCD01022920;AGCD01022921 MODEL 8791997 protein-coding Tcea3 transcription elongation factor A3 INVOLVED IN gene expression (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955452 3384424 3434182 - 102015170 AGCD01043922;AGCD01043923;AGCD01043924;AGCD01043925;AGCD01043926;GBCB01004806;XM_005394762 XP_005394819 MODEL 8946843 pseudo LOC102004504 14-3-3 protein theta pseudogene NW_004955429 23815798 23816541 + 102004504 AGCD01029080;XM_005387222 MODEL 8984354 protein-coding Scgb1c1 secretoglobin family 1C member 1 NW_004955476 11841962 11843325 - 102003864 AGCD01055475;GBBH01206760;XM_005401893 XP_005401950 MODEL 39132230 snrna U6 U6 spliceosomal RNA 9052577 protein-coding Tnks2 tankyrase 2 ENCODES a protein that exhibits enzyme binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN multicellular organism growth (ortholog); negative regulation of telomere maintenance via telomere lengthening (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nuclear envelope (ortholog); nucleus (ortholog) NW_004955425 1419013 1492267 - 102007572 AGCD01025230;AGCD01025231;GBCB01057193;XM_005385828;XM_013514874 XP_005385885;XP_013370328 MODEL 8805289 protein-coding Lamc1 laminin subunit gamma 1 ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); glycosphingolipid binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN cell adhesion (ortholog); cell migration (ortholog); chromatin organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aortic disease (ortholog); autistic disorder (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); laminin-111 trimer (ortholog) NW_004955406 21863836 21990161 + 102021624 AGCD01006149;AGCD01006150;GBBH01077450;GBCB01039166;XM_005375017 XP_005375074 MODEL 9022720 protein-coding Tvp23a trans-golgi network vesicle protein 23 homolog A ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955442 7691770 7716383 + 102006960 AGCD01037628;GBBH01007446;XM_005391182;XM_005391183;XM_013517908;XM_013517909;XM_013517910;XM_013517911;XM_013517912;XM_013517913;XM_013517914 XP_005391239;XP_005391240;XP_013373362;XP_013373363;XP_013373364;XP_013373365;XP_013373366;XP_013373367;XP_013373368 MODEL 8994435 protein-coding Sipa1l3 signal induced proliferation associated 1 like 3 INVOLVED IN cytoskeleton organization (ortholog); epithelial cell morphogenesis (ortholog); establishment of epithelial cell polarity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cataract 45 (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); glutamatergic synapse (ortholog) NW_004955468 1212102 1438527 - 102023344 AGCD01051762;AGCD01051763;AGCD01051764;AGCD01051765;AGCD01051766;AGCD01051767;AGCD01051768;GBDF01067550;XM_005399879;XM_013522426 XP_005399936;XP_013377880 MODEL 8916639 ncrna LOC102014085 uncharacterized LOC102014085 NW_004955438 12937928 12940523 - 102014085 AGCD01035276;GBDK01228462;XR_001235126;XR_261930 MODEL 8898471 protein-coding LOC102022042 chromosome unknown open reading frame, human C1orf216 ASSOCIATED WITH sarcoma (ortholog) NW_004955452 13784336 13789377 - 102022042 AGCD01044435;GBBH01204495;XM_005395155;XM_005395156 XP_005395212;XP_005395213 MODEL 8810476 protein-coding Lrrc8a leucine rich repeat containing 8 VRAC subunit A ENCODES a protein that exhibits cyclic-GMP-AMP transmembrane transporter activity (ortholog); identical protein binding (ortholog); monoatomic anion channel activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); cell volume homeostasis (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); agammaglobulinemia (ortholog); agammaglobulinemia 5 (ortholog); FOUND IN cell surface (ortholog); lysosomal membrane (ortholog); membrane (ortholog) NW_004955570 1270710 1295658 + 102010956 AGCD01074807;GBDK01143504;XM_005413593;XM_005413595;XM_005413596;XM_005413597;XM_005413598;XM_013509413 XP_005413650;XP_005413652;XP_005413653;XP_005413654;XP_005413655;XP_013364867 MODEL 9051398 protein-coding LOC102015980 vomeronasal type-2 receptor 116-like NW_004955524 4322863 4376791 - 102015980 AGCD01068967;AGCD01068968;AGCD01068969;AGCD01068970;AGCD01068971;XM_013507206 XP_013362660 MODEL 8812521 protein-coding Tspan2 tetraspanin 2 INVOLVED IN astrocyte development (ortholog); axon development (ortholog); inflammatory response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN myelin sheath (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955435 18344320 18371248 - 102003689 AGCD01033403;GBCB01057093;XM_013516547;XM_013516548 XP_013372001;XP_013372002 MODEL 8834627 ncrna LOC102012565 uncharacterized LOC102012565 NW_004955507 4294100 4350414 + 102012565 AGCD01065647;AGCD01065648;GBDF01133790;XR_001231617;XR_264382 MODEL 8756374 protein-coding Smim43 small integral membrane protein 43 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN mesendoderm development (ortholog); positive regulation of D-glucose transmembrane transport (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955428 18789746 18797027 + 102018420 AGCD01028071;GBDK01348016;XM_013515253 XP_013370707 MODEL 8784824 protein-coding Nr5a2 nuclear receptor subfamily 5 group A member 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN bile acid metabolic process (ortholog); calcineurin-mediated signaling (ortholog); cartilage development (ortholog); ASSOCIATED WITH anovulation (ortholog); Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955406 36263257 36415494 + 102029587 AGCD01006551;AGCD01006552;AGCD01006553;AGCD01006554;AGCD01006555;GBDF01014182;XM_005375135;XM_005375136;XM_005375137;XM_005375138;XM_013521988;XM_013521997 XP_005375192;XP_005375193;XP_005375194;XP_005375195;XP_013377442;XP_013377451 MODEL 8858887 protein-coding Gcc1 GRIP and coiled-coil domain containing 1 ASSOCIATED WITH cannabis abuse (ortholog); Cocaine-Related Disorders (ortholog); phencyclidine abuse (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog) NW_004955479 8636274 8642027 - 102022917 AGCD01056451;GBBH01036831;XM_005402361 XP_005402418 MODEL 10086815 protein-coding Kiaa0040 KIAA0040 ortholog ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955406 14960837 14961459 - 106149968 AGCD01005975;GBDF01021546;XM_013520951 XP_013376405 MODEL 8881600 protein-coding Slc7a11 solute carrier family 7 member 11 ENCODES a protein that exhibits cystine:glutamate antiporter activity (ortholog); L-kynurenine transmembrane transporter activity (ortholog); leak channel activity (ortholog); INVOLVED IN adult behavior (ortholog); amino acid import across plasma membrane (ortholog); brain development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); Alcohol-Related Disorders (ortholog); FOUND IN apical part of cell (ortholog); astrocyte projection (ortholog); brush border membrane (ortholog) NW_004955428 5238460 5309085 + 102024825 AGCD01027705;AGCD01027706;GBDK01303653;XM_005386709;XM_013515245 XP_005386766;XP_013370699 MODEL 8915530 protein-coding Slc22a13 solute carrier family 22 member 13 ENCODES a protein that exhibits nicotinate transmembrane transporter activity (ortholog); urate transmembrane transporter activity (ortholog); INVOLVED IN negative regulation of fatty acid metabolic process (ortholog); nicotinate transport (ortholog); positive regulation of T cell mediated cytotoxicity directed against tumor cell target (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955421 5027568 5040000 - 102015731 AGCD01021710;GBCQ01007054;XM_005383735;XM_013513635 XP_005383792;XP_013369089 MODEL 8748778 pseudo LOC102007822 60S ribosomal protein L27a pseudogene NW_004955442 13747235 13747833 + 102007822 AGCD01037787 MODEL 10099434 protein-coding Dmbt1 deleted in malignant brain tumors 1 ENCODES a protein that exhibits DNA binding (ortholog); heparan sulfate binding (ortholog); lipopolysaccharide binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); blastocyst development (ortholog); cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955477 863388 899703 + 106146406 AGCD01055495;AGCD01055496;GBCQ01031749;XM_013503090;XM_013503091;XM_013503092;XM_013503093;XM_013503094 XP_013358544;XP_013358545;XP_013358546;XP_013358547;XP_013358548 MODEL 8774400 protein-coding Limk2 LIM domain kinase 2 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN astral microtubule organization (ortholog); cornea development in camera-type eye (ortholog); establishment of vesicle localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); cis-Golgi network (ortholog); cytoplasm (ortholog) NW_004955455 5406085 5473418 + 102005894 AGCD01045726;AGCD01045727;GBCE01030826;XM_005396301;XM_005396302;XM_005396304;XM_005396305;XM_013520329 XP_005396358;XP_005396359;XP_005396361;XP_005396362;XP_013375783 MODEL 8854969 protein-coding Scgb3a1 secretoglobin family 3A member 1 INVOLVED IN positive regulation of myoblast fusion (ortholog); ASSOCIATED WITH endometriosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955408 147777 149227 + 102026395 AGCD01007909;GBDF01053406;XM_005376000 XP_005376057 MODEL 39133624 snrna U4 U4 spliceosomal RNA 8818417 protein-coding Safb2 scaffold attachment factor B2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of androgen receptor signaling pathway (ortholog); Sertoli cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955495 3775301 3802642 + 102025921 AGCD01061879;AGCD01061880;AGCD01061881;GBBH01115695;GBDK01009747;XM_005405763 XP_005405820 MODEL 8739150 protein-coding Il19 interleukin 19 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN interleukin-19-mediated signaling pathway (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); negative regulation of low-density lipoprotein particle clearance (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH asthma (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); chronic kidney disease (ortholog); FOUND IN extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955406 42376102 42384902 + 102022669 AGCD01006704;AGCD01006705;XM_013502759;XM_013502762 XP_013358213;XP_013358216 MODEL 8732067 protein-coding Dusp3 dual specificity phosphatase 3 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); MAP kinase phosphatase activity (ortholog); phosphatase activity (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); flagellated sperm motility (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); lung cancer (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN axonemal microtubule doublet inner sheath (ortholog); cytosol (ortholog); immunological synapse (ortholog) NW_004955451 17064739 17069964 - 102004773 AGCD01043716;GBCB01004598;GBDF01053135;XM_013519428 XP_013374882 MODEL 8787019 protein-coding Xkr5 XK related 5 ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); ovarian cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955403 53964767 53981549 + 102007726 AGCD01003082;AGCD01003083;GBBH01134536;XM_005373843;XM_005373845;XM_013514597;XM_013514598;XM_013514601 XP_005373900;XP_005373902;XP_013370051;XP_013370052;XP_013370055 MODEL 9008764 protein-coding Rab11fip4 RAB11 family interacting protein 4 ENCODES a protein that exhibits protein homodimerization activity (ortholog); small GTPase binding (ortholog); INVOLVED IN neural retina development (ortholog); positive regulation of G1 to G0 transition (ortholog); regulation of cytokinesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasmic vesicle (ortholog); endocytic vesicle (ortholog) NW_004955481 6501704 6554448 + 102010695 AGCD01057029;AGCD01057030;GBBH01052215;XM_013503485;XM_013503486 XP_013358939;XP_013358940 MODEL 8824225 protein-coding Tafa2 TAFA chemokine like family member 2 INVOLVED IN memory (ortholog); visual learning (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955458 8935792 9351358 - 102016133 AGCD01047627;AGCD01047628;AGCD01047629;AGCD01047630;AGCD01047631;AGCD01047632;AGCD01047633;AGCD01047634;AGCD01047635;AGCD01047636;AGCD01047637;AGCD01047638;GBCE01183273;XM_013521029;XM_013521030;XM_013521031 XP_013376483;XP_013376484;XP_013376485 MODEL 39132754 snrna U6 U6 spliceosomal RNA 8850790 protein-coding LOC102012566 fatty acid desaturase 2-like protein FADS2P1 NW_004955511 1986298 2020040 + 102012566 AGCD01066386;AGCD01066387;GBCE01044968;XM_005407981 XP_005408038 MODEL 8864964 protein-coding Tfap4 transcription factor AP-4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955442 13160467 13174288 + 102014088 AGCD01037763;AGCD01037764;GBDF01250040;GBDJ01175819;XM_005391306 XP_005391363 MODEL 8855855 pseudo LOC102003440 ankyrin repeat domain-containing protein 27 pseudogene NW_004955474 5254195 5258861 - 102003440 AGCD01054402 MODEL 8749480 protein-coding Susd1 sushi domain containing 1 ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog) NW_004955419 15153722 15287373 + 102029401 AGCD01020061;AGCD01020062;AGCD01020063;AGCD01020064;AGCD01020065;AGCD01020066;AGCD01020067;AGCD01020068;AGCD01020069;AGCD01020070;GBCB01010570;XM_013513298 XP_013368752 MODEL 8756930 ncrna LOC102017923 uncharacterized LOC102017923 NW_004955559 666827 667985 + 102017923 AGCD01073607;GBBH01083168;XR_264997 MODEL 9019866 pseudo LOC102009737 nucleophosmin pseudogene NW_004955503 3206385 3225585 - 102009737 AGCD01064619 MODEL 8769880 protein-coding Exoc3 exocyst complex component 3 PARTICIPATES IN E-cadherin signaling pathway; insulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); midbody (ortholog); presynaptic membrane (ortholog) NW_004955504 195743 223812 + 102020356 AGCD01064816;GBDF01047252;XM_005406996;XM_005406997;XM_005406998;XM_013505897 XP_005407053;XP_005407054;XP_005407055;XP_013361351 MODEL 8943440 protein-coding LOC102023098 vomeronasal type-1 receptor 2-like NW_004955604 464901 465824 + 102023098 AGCD01076908;XM_005414885 XP_005414942 MODEL 8820553 protein-coding Fhip2a FHF complex subunit HOOK interacting protein 2A ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955431 19751575 19780905 + 102018757 AGCD01030455;GBBH01186995;GBCE01153442;XM_013515880 XP_013371334 MODEL 8753232 protein-coding Tceal1 transcription elongation factor A like 1 ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia 11 (ortholog); Muscle Spasticity (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955548 655219 655671 + 102027347 AGCD01072340;XM_005411994 XP_005412051 MODEL 10313125 ncrna LOC106147313 uncharacterized LOC106147313 NW_004955542 1923448 1933779 + 106147313 AGCD01071508;GBDJ01304830;XR_001232155 MODEL 9044936 protein-coding Bmt2 base methyltransferase of 25S rRNA 2 homolog ENCODES a protein that exhibits protein-containing complex binding (ortholog); S-adenosyl-L-methionine binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to methionine (ortholog); positive regulation of TORC1 signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955432 19046121 19107178 - 102003997 AGCD01031165;AGCD01031166;AGCD01031167;GBDF01192648;GBDJ01278833;XM_013516035 XP_013371489 MODEL 39132234 snrna U6 U6 spliceosomal RNA 8837606 protein-coding Tnmd tenomodulin INVOLVED IN cellular response to BMP stimulus (ortholog); endothelial cell morphogenesis (ortholog); negative regulation of angiogenesis (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955503 6732791 6750693 + 102020142 AGCD01064767;AGCD01064768;GBBH01218483;XM_005406931 XP_005406988 MODEL 8753417 protein-coding LOC102009347 translation initiation factor IF-2-like NW_004955406 23881198 23887173 - 102009347 AGCD01006186;GBCQ01162563;XM_005375074;XM_013521722 XP_005375131;XP_013377176 MODEL 8869879 protein-coding Lamc2 laminin subunit gamma 2 ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN basement membrane (ortholog); cell cortex (ortholog); extracellular region (ortholog) NW_004955406 22020330 22074271 + 102022159 AGCD01006150;AGCD01006151;GBDI01105477;XM_005375020 XP_005375077 MODEL 8748319 pseudo LOC102015986 60S ribosomal protein L17 pseudogene NW_004955441 7018031 7018593 - 102015986 AGCD01036947 MODEL 39133133 snrna U6 U6 spliceosomal RNA 8992688 protein-coding Tspan3 tetraspanin 3 ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); lung cancer (ortholog) NW_004955450 1916067 1937364 - 102020506 AGCD01042371;GBCB01005521;XM_005393482 XP_005393539 MODEL 8775535 protein-coding CUNHXorf38 chromosome unknown CXorf38 homolog ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955565 1963195 1983171 + 102004987 AGCD01074336;GBBH01007180;XM_005413269;XM_005413270 XP_005413326;XP_005413327 MODEL 8926387 protein-coding Gtf2h1 general transcription factor IIH subunit 1 ENCODES a protein that exhibits chromatin binding (ortholog); nuclear thyroid hormone receptor binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); positive regulation of DNA-templated transcription (ortholog); transcription by RNA polymerase II (ortholog); PARTICIPATES IN nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription factor TFIIH core complex (ortholog) NW_004955414 33028701 33063233 + 102018281 AGCD01015795;GBDF01085697;XM_005380408 XP_005380465 MODEL 9003340 protein-coding LOC102021325 serpin B9-like NW_004955465 10360723 10368587 - 102021325 AGCD01050507;XM_005398914 XP_005398971 MODEL 8731598 protein-coding Glb1l galactosidase beta 1 like ASSOCIATED WITH cerebrotendinous xanthomatosis (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955453 14185582 14196779 + 102017420 AGCD01044859;GBCE01171583;XM_005395569;XM_005395570 XP_005395626;XP_005395627 MODEL 39132918 snrna U6 U6 spliceosomal RNA 8716906 ncrna LOC102018740 uncharacterized LOC102018740 NW_004955423 15350156 15352340 + 102018740 AGCD01023805;GBCB01061780;XR_260970 MODEL 9015050 ncrna LOC102004514 uncharacterized LOC102004514 NW_004955527 2177694 2179801 + 102004514 AGCD01069423;GBBH01097112;XR_264674 MODEL 8751788 protein-coding Slc22a14 solute carrier family 22 member 14 ENCODES a protein that exhibits riboflavin transmembrane transporter activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); sperm capacitation (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); sperm principal piece (ortholog) NW_004955421 5009560 5023833 - 102014789 AGCD01021710;GBDF01124260;XM_005383731;XM_005383732;XM_005383733;XM_005383734;XM_013513634 XP_005383788;XP_005383789;XP_005383790;XP_005383791;XP_013369088 MODEL 8975509 ncrna LOC102014092 uncharacterized LOC102014092 NW_004955445 4863812 4869530 + 102014092 AGCD01039433;GBDF01276591;XR_262302 MODEL 8830164 protein-coding Twf1 twinfilin actin binding protein 1 ENCODES a protein that exhibits actin binding (ortholog); actin monomer binding (ortholog); ATP binding (ortholog); INVOLVED IN barbed-end actin filament capping (ortholog); conditioned place preference (ortholog); negative regulation of actin filament polymerization (ortholog); ASSOCIATED WITH lymphoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-cell junction (ortholog); cytosol (ortholog) NW_004955500 3050028 3070799 - 102021991 AGCD01063727;AGCD01063728;AGCD01063729;AGCD01063730;GBDI01106674;GBDK01092916;XM_013505631 XP_013361085 MODEL 8720602 protein-coding Dmbx1 diencephalon/mesencephalon homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adult feeding behavior (ortholog); adult locomotory behavior (ortholog); brain development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); strabismus (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955464 11788526 11811885 - 102019153 AGCD01050161;GBDF01264890;XM_005398674 XP_005398731 MODEL 9014819 ncrna LOC102019125 uncharacterized LOC102019125 NW_004955402 25007914 25012011 + 102019125 AGCD01000650;GBDF01105810;XR_259066 MODEL 8821153 protein-coding LOC102010524 protein S100-A6-like NW_004955545 107981 108711 - 102010524 AGCD01071767;XM_005411404 XP_005411461 MODEL 8922542 protein-coding LOC102012916 tripartite motif-containing protein 60 NW_004955403 40239714 40250397 - 102012916 AGCD01002675;AGCD01002676;GBDF01161849;XM_005373589;XM_013515246;XM_013515248 XP_005373646;XP_013370700;XP_013370702 MODEL 8821644 ncrna LOC102025248 uncharacterized LOC102025248 NW_004955485 8508562 8510362 - 102025248 AGCD01058717;GBDF01051854;XR_263929 MODEL 8912186 protein-coding Nr6a1 nuclear receptor subfamily 6 group A member 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN gamete generation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of mesenchymal stem cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955419 3425406 3624315 + 102021663 AGCD01019723;AGCD01019724;AGCD01019725;AGCD01019726;AGCD01019727;AGCD01019728;AGCD01019729;AGCD01019730;GBDF01081507;XM_005382484;XM_005382490;XM_005382491;XM_013513155 XP_005382541;XP_005382547;XP_005382548;XP_013368609 MODEL 8931447 protein-coding LOC102005213 homeobox protein Hox-B6 NW_004955403 20538174 20539079 - 102005213 AGCD01002162;GBCQ01033155;GBDI01385068;XM_013512796 XP_013368250 MODEL 39132755 snrna U6 U6 spliceosomal RNA 8894794 protein-coding Kiaa0232 KIAA0232 ortholog ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955514 3581654 3630754 - 102018427 AGCD01067100;AGCD01067101;GBCQ01040836;GBCQ01040843;XM_013506822 XP_013362276 MODEL 8946911 protein-coding LOC102007826 zinc finger protein 14-like NW_004955569 1580699 1628988 + 102007826 AGCD01074671;AGCD01074672;AGCD01074673;GBDI01333117;XM_005413504 XP_005413561 MODEL 9015618 protein-coding Gcc2 GRIP and coiled-coil domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN Golgi ribbon formation (ortholog); Golgi to plasma membrane protein transport (ortholog); late endosome to Golgi transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog); trans-Golgi network (ortholog) NW_004955470 12011606 12053625 + 102007649 AGCD01052917;AGCD01052918;GBBH01118856;GBDF01123288;XM_005400800;XM_013522791;XM_013522792 XP_005400857;XP_013378245;XP_013378246 MODEL 8909135 ncrna LOC102020211 uncharacterized LOC102020211 NW_004955408 24110038 24115850 + 102020211 AGCD01008594;GBDF01118248;XR_001232406 MODEL 9003855 ncrna LOC102009738 uncharacterized LOC102009738 NW_004955504 990784 1006063 + 102009738 AGCD01064834;GBDI01386594;XR_001231555;XR_001231556;XR_001231557;XR_001231558;XR_001231559;XR_001231560;XR_001231561;XR_001231562;XR_001231563;XR_001231564;XR_001231565;XR_001231566;XR_001231567;XR_001231568;XR_264274;XR_264276 MODEL 8770273 protein-coding Tceal7 transcription elongation factor A like 7 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); uterine carcinosarcoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955548 467664 470196 + 102008355 AGCD01072332;XM_005412018 XP_005412075 MODEL 8795351 protein-coding LOC102003778 cationic trypsin-3-like NW_004955494 1217574 1223680 + 102003778 AGCD01061392;XM_013504918 XP_013360372 MODEL 39133625 snrna U4 U4 spliceosomal RNA 8798320 protein-coding Lrrc8b leucine rich repeat containing 8 VRAC subunit B ENCODES a protein that exhibits volume-sensitive anion channel activity (ortholog); INVOLVED IN monoatomic anion transmembrane transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); monoatomic ion channel complex (ortholog); plasma membrane (ortholog) NW_004955423 4585902 4612008 - 102008550 AGCD01023540;GBDF01083900;XM_005385088;XM_005385091;XM_013514456;XM_013514457;XM_013514458 XP_005385145;XP_005385148;XP_013369910;XP_013369911;XP_013369912 MODEL 10143955 protein-coding LOC106147314 protein FAM220A-like NW_004955542 1202754 1203438 - 106147314 AGCD01071493;XM_013508011 XP_013363465 MODEL 39132236 snrna U6 U6 spliceosomal RNA 8744069 ncrna LOC102009348 uncharacterized LOC102009348 NW_004955455 11123017 11124542 - 102009348 AGCD01045984;GBDF01074169;XR_262855;XR_262856 MODEL 9009561 protein-coding Sag S-antigen visual arrestin ENCODES a protein that exhibits opsin binding (ortholog); phosphoprotein binding (ortholog); protein sequestering activity (ortholog); PARTICIPATES IN altered visual phototransduction pathway; retinitis pigmentosa pathway; visual phototransduction pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cone-rod dystrophy (ortholog); congenital stationary night blindness (ortholog); FOUND IN membrane (ortholog); photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog) NW_004955453 2845561 2878342 - 102009796 AGCD01044642;AGCD01044643;AGCD01044644;AGCD01044645;GBDK01342716;XM_005395351;XM_005395352;XM_013519856;XM_013519857 XP_005395408;XP_005395409;XP_013375310;XP_013375311 MODEL 8794402 protein-coding Il1a interleukin 1 alpha ENCODES a protein that exhibits copper ion binding (ortholog); cytokine activity (ortholog); INVOLVED IN cellular response to heat (ortholog); connective tissue replacement involved in inflammatory response wound healing (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); allergic bronchopulmonary aspergillosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955470 1527710 1538418 + 102024893 AGCD01052644;AGCD01052645;GBDK01021553;XM_005400596 XP_005400653 MODEL 8947861 protein-coding Xkr6 XK related 6 ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955403 52410318 52636952 - 102025203 AGCD01003003;AGCD01003004;AGCD01003005;AGCD01003006;AGCD01003007;AGCD01003008;AGCD01003009;AGCD01003010;AGCD01003011;GBDJ01373326;XM_005373810 XP_005373867 MODEL 8739725 protein-coding Dusp4 dual specificity phosphatase 4 ENCODES a protein that exhibits MAP kinase serine/threonine phosphatase activity (ortholog); MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); phosphatase activity (ortholog); INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); protein dephosphorylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); systemic juvenile rheumatoid arthritis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955463 5778945 5794282 - 102021217 AGCD01049644;GBCE01111467;XM_005398363 XP_005398420 MODEL 8951159 protein-coding Slc7a13 solute carrier family 7 member 13 ENCODES a protein that exhibits L-amino acid transmembrane transporter activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); L-cystine transport (ortholog); L-glutamate transmembrane transport (ortholog); FOUND IN apical plasma membrane (ortholog) NW_004955417 3882910 3897753 - 102005591 AGCD01017931;GBCB01068798;XM_005381746;XM_005381747 XP_005381803;XP_005381804 MODEL 8900974 protein-coding Rab11fip5 RAB11 family interacting protein 5 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to type II interferon (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN early endosome (ortholog); Golgi apparatus (ortholog); mitochondrial outer membrane (ortholog) NW_004955424 12506738 12544284 + 102019291 AGCD01024613;AGCD01024614;GBBH01155266;GBDF01046089;XM_005385572;XM_005385573;XM_005385574 XP_005385629;XP_005385630;XP_005385631 MODEL 8750554 pseudo LOC102012567 transcription initiation factor TFIID subunit 2 pseudogene NW_004955511 981095 984836 - 102012567 AGCD01066350 MODEL 8878242 protein-coding Tfb1m transcription factor B1, mitochondrial ENCODES a protein that exhibits rRNA (adenine-N6,N6-)-dimethyltransferase activity (ortholog); S-adenosyl-L-methionine binding (ortholog); INVOLVED IN mitochondrial small ribosomal subunit assembly (ortholog); rRNA methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955439 6889432 6943152 + 102021047 AGCD01035762;GBDF01155564;XM_005390549;XM_005390550 XP_005390606;XP_005390607 MODEL 8974371 ncrna LOC102022044 uncharacterized LOC102022044 NW_004955406 5152131 5165702 - 102022044 AGCD01005714;GBDF01220762;XR_001236233 MODEL 8796283 protein-coding Fhip2b FHF complex subunit HOOK interacting protein 2B INVOLVED IN gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955403 45587970 45597700 + 102015591 AGCD01002824;GBCQ01092807;GBDF01049517;XM_013513731;XM_013513735 XP_013369185;XP_013369189 MODEL 8796947 pseudo LOC102017926 40S ribosomal protein S20 pseudogene NW_004955574 1288578 1289272 - 102017926 AGCD01075172 MODEL 8877461 protein-coding Slc7a14 solute carrier family 7 member 14 ENCODES a protein that exhibits gamma-aminobutyric acid transmembrane transporter activity (ortholog); INVOLVED IN gamma-aminobutyric acid import (ortholog); ASSOCIATED WITH blindness (ortholog); fundus dystrophy (ortholog); retinitis pigmentosa 68 (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955420 624929 732108 - 102021769 AGCD01020550;AGCD01020551;GBCE01181118;XM_005382983 XP_005383040 MODEL 8790078 ncrna LOC102020215 uncharacterized LOC102020215 NW_004955409 2720168 2720429 + 102020215 AGCD01009216;GBBH01139966;XR_259746 MODEL 8955768 protein-coding Bmx BMX non-receptor tyrosine kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN signal transduction (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog); ruffle membrane (ortholog) NW_004955519 2638081 2689601 - 102015230 AGCD01067937;GBDI01107256;XM_005409162;XM_005409163;XM_013507003;XM_013507004 XP_005409219;XP_005409220;XP_013362457;XP_013362458 MODEL 8981791 protein-coding Tnn tenascin N ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN axonogenesis (ortholog); cell-matrix adhesion (ortholog); dendrite self-avoidance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN CA3 pyramidal cell dendrite (ortholog); cell surface (ortholog); extracellular matrix (ortholog) NW_004955406 14882414 14950572 + 102015073 AGCD01005975;GBDI01261146;XM_005374897;XM_005374898;XM_013520939 XP_005374954;XP_005374955;XP_013376393 MODEL 8961360 protein-coding LOC102015988 olfactory receptor 4M1 ENCODES a protein that exhibits olfactory receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); glucose homeostasis (ortholog); positive regulation of appetite (ortholog); FOUND IN plasma membrane (ortholog) NW_004955550 587951 588914 - 102015988 AGCD01072511;GBDF01020840;XM_005412034 XP_005412091 MODEL 39133134 snrna U6 U6 spliceosomal RNA 9058986 protein-coding Siral1 SIR2 antiphage like 1 ENCODES a protein that exhibits identical protein binding (ortholog); NAD+ nucleosidase activity (ortholog); INVOLVED IN immune response (ortholog); regulation of toll-like receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955412 27239420 27287097 + 102029063 AGCD01013232;AGCD01013233;GBDK01318709;XM_005378495;XM_013511028;XM_013511029 XP_005378552;XP_013366482;XP_013366483 MODEL 8788406 protein-coding Tspan31 tetraspanin 31 ASSOCIATED WITH cholangiocarcinoma (ortholog); familial melanoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955458 5455012 5457912 + 102010452 AGCD01047493;GBDI01358535;XM_005397412 XP_005397469 MODEL 8735776 protein-coding Gtf2h3 general transcription factor IIH subunit 3 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN core TFIIH complex portion of holo TFIIH complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955482 5365669 5380047 - 102014667 AGCD01057326;GBDI01067699;XM_005403024 XP_005403081 MODEL 39132919 snrna U6 U6 spliceosomal RNA 8901969 protein-coding Lamc3 laminin subunit gamma 3 INVOLVED IN astrocyte development (ortholog); cell morphogenesis (ortholog); retina development in camera-type eye (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); brain disease (ortholog); FOUND IN basement membrane (ortholog) NW_004955513 872301 934234 + 102021586 AGCD01066834;AGCD01066835;AGCD01066836;AGCD01066837;GBCE01021711;XM_005408636 XP_005408693 MODEL 9063476 protein-coding Glcci1 glucocorticoid induced 1 INVOLVED IN cellular response to glucose stimulus (ortholog); ASSOCIATED WITH asthma (ortholog); childhood-onset asthma (ortholog); Chronic Lung Allograft Dysfunction (ortholog); FOUND IN cytoplasm (ortholog); podocyte foot (ortholog) NW_004955432 15060239 15112545 + 102028326 AGCD01031059;GBBH01208644;GBDF01279147;XM_013516043 XP_013371497 MODEL 8801421 protein-coding LOC102021328 alpha-2-macroglobulin-like NW_004955413 5885352 5996030 - 102021328 AGCD01013695;AGCD01013696;AGCD01013697;GBDI01211358;XM_005378888;XM_013511450;XM_013511451;XM_013511453;XR_260065 XP_005378945;XP_013366904;XP_013366905;XP_013366907 MODEL 8741352 pseudo LOC102003443 mitochondrial fission factor pseudogene NW_004955416 13475518 13476401 - 102003443 AGCD01017224;XM_005381465 MODEL 8957853 protein-coding Susd2 sushi domain containing 2 INVOLVED IN negative regulation of cell cycle G1/S phase transition (ortholog); negative regulation of cell division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955455 8151199 8159018 - 102007510 AGCD01045880;GBDJ01020256;XM_005396406 XP_005396463 MODEL 8812330 pseudo LOC102023099 olfactory receptor 7A17-like NW_004955626 111700 112600 + 102023099 AGCD01077468 MODEL 8756050 ncrna LOC102004516 uncharacterized LOC102004516 NW_004955436 16301782 16314045 + 102004516 AGCD01033912;GBDF01159287;XR_261792 MODEL 8778310 protein-coding Scgb3a2 secretoglobin family 3A member 2 ASSOCIATED WITH allergic rhinitis (ortholog); asthma (ortholog); Lung Neoplasms (ortholog); FOUND IN extracellular region (ortholog) NW_004955415 6332121 6335474 - 102010993 AGCD01016014;GBDK01002570;XM_005380654;XM_013512103 XP_005380711;XP_013367557 MODEL 8888443 protein-coding Gcdh glutaryl-CoA dehydrogenase ENCODES a protein that exhibits fatty-acyl-CoA binding (ortholog); flavin adenine dinucleotide binding (ortholog); glutaryl-CoA dehydrogenase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); congenital dyserythropoietic anemia type IVa (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleus (ortholog) NW_004955415 31952400 31958067 + 102025456 AGCD01016704;GBDI01005012;XM_005381040 XP_005381097 MODEL 8969322 protein-coding Lims1 LIM zinc finger domain containing 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-containing complex binding (ortholog); zinc ion binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament network formation (ortholog); cell-cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cell-cell junction (ortholog); focal adhesion (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955470 12142997 12158273 + 102008399 AGCD01052919;GBBH01209486;GBCQ01093053;XM_013522811 XP_013378265 MODEL 8942349 protein-coding LOC102014103 cytochrome P450 2B5-like NW_004955813 9300 18593 - 102014103 AGCD01078398;AGCD01078399;AGCD01078400;XM_005415120;XM_005415121 XP_005415177;XP_005415178 MODEL 8710237 protein-coding Twf2 twinfilin actin binding protein 2 ENCODES a protein that exhibits actin monomer binding (ortholog); ATP binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN barbed-end actin filament capping (ortholog); cellular response to growth factor stimulus (ortholog); cellular response to retinoic acid (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); filopodium (ortholog); growth cone (ortholog) NW_004955532 3835620 3844760 - 102027109 AGCD01070299;GBBH01064145;XM_013507654;XM_013507655 XP_013363108;XP_013363109 MODEL 8864234 protein-coding LOC102020216 olfactory receptor 6C76 NW_004955458 2704483 2705460 - 102020216 AGCD01047240;XM_013520799 XP_013376253 MODEL 8857570 ncrna LOC102010525 uncharacterized LOC102010525 NW_004955440 3346013 3352979 + 102010525 AGCD01036240;GBBH01169042;XR_262002 MODEL 8937108 protein-coding LOC102019130 uncharacterized protein CXorf22-like NW_004955674 10208 53094 + 102019130 AGCD01077956;AGCD01077957;AGCD01077958;AGCD01077959;AGCD01077960;GBCE01169748;XM_005415069 XP_005415126 MODEL 8989543 protein-coding Dmc1 DNA meiotic recombinase 1 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); DNA strand exchange activity (ortholog); identical protein binding (ortholog); INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); double-strand break repair via homologous recombination (ortholog); female meiosis I (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); azoospermia (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); condensed nuclear chromosome (ortholog) NW_004955413 24685311 24724269 - 102020645 AGCD01014374;AGCD01014375;AGCD01014376;AGCD01014377;AGCD01014378;GBDF01224109;XM_005379261 XP_005379318 MODEL 39132240 snrna U6 U6 spliceosomal RNA 9007183 protein-coding CUNHXorf58 chromosome unknown CXorf58 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955509 4325198 4347495 + 102015332 AGCD01066064;GBCQ01050996;XM_005407834;XM_005407835 XP_005407891;XP_005407892 MODEL 8922235 protein-coding LOC102012918 atherin-like NW_004955452 3351568 3354575 - 102012918 AGCD01043921;GBDF01123090;XM_005394752;XM_013519519 XP_005394809;XP_013374973 MODEL 39133135 snrna U6 U6 spliceosomal RNA 8795136 ncrna LOC102025249 uncharacterized LOC102025249 NW_004955420 13631690 13636547 + 102025249 AGCD01020925;GBDF01082247;XR_260714 MODEL 9043286 ncrna LOC102018745 uncharacterized LOC102018745 NW_004955425 3755805 3770222 - 102018745 AGCD01025296;AGCD01025297;GBDF01112248;XR_261124 MODEL 8712693 protein-coding Exoc3l1 exocyst complex component 3 like 1 INVOLVED IN exocytosis (ortholog); peptide hormone secretion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN exocyst (ortholog); secretory granule (ortholog) NW_004955484 9429578 9434982 + 102013087 AGCD01058415;GBDJ01264398;XM_005403687;XM_013503982;XM_013503983;XM_013503984 XP_005403744;XP_013359436;XP_013359437;XP_013359438 MODEL 8955140 protein-coding LOC102007827 UDP-glucuronosyltransferase 2B17-like NW_004955447 4402579 4413284 - 102007827 AGCD01040717;GBCB01083295;XM_005392819;XM_013518535 XP_005392876;XP_013373989 MODEL 8849007 protein-coding Kiaa0319 KIAA0319 ortholog INVOLVED IN central nervous system neuron development (ortholog); multicellular organismal response to stress (ortholog); negative regulation of axon extension (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); plasma membrane (ortholog) NW_004955483 2404061 2463210 + 102011123 AGCD01057676;AGCD01057677;AGCD01057678;GBDF01262006;XM_005403369;XM_005403370;XM_013503840 XP_005403426;XP_005403427;XP_013359294 MODEL 8962038 pseudo LOC102012571 peptidyl-prolyl cis-trans isomerase A pseudogene NW_004955434 15042346 15042821 - 102012571 AGCD01032459 MODEL 9055997 protein-coding Rab12 RAB12, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); endosome to lysosome transport (ortholog); positive regulation of macroautophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN autophagosome (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) NW_004955402 3102709 3109701 - 102028917 AGCD01000096;GBCB01005815;GBDK01084463;XM_013516234 XP_013371688 MODEL 9037413 pseudo LOC102003782 solute carrier organic anion transporter family member 4C1 pseudogene NW_004955496 8201732 8203098 - 102003782 AGCD01062392 MODEL 39133626 snrna U4 U4 spliceosomal RNA 8781009 protein-coding Tceal8 transcription elongation factor A like 8 ASSOCIATED WITH autistic disorder (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955548 391202 393533 - 102022126 AGCD01072331;GBCC01040897;XM_005411975;XM_005411976;XM_005411977;XM_013508537;XM_013508538 XP_005412032;XP_005412033;XP_005412034;XP_013363991;XP_013363992 MODEL 9043692 protein-coding Tafa3 TAFA chemokine like family member 3 INVOLVED IN negative regulation of microglial cell activation (ortholog); positive regulation of microglial cell activation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN extracellular region (ortholog) NW_004955435 16132345 16142291 + 102006816 AGCD01033296;GBCB01120795;GBDI01094729;XM_005388970 XP_005389027 MODEL 8701672 protein-coding LOC102009351 olfactory receptor 1361-like NW_004955408 1568710 1569651 + 102009351 AGCD01007965;XM_005376033 XP_005376090 MODEL 8703235 protein-coding Sall1 spalt like transcription factor 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN adrenal gland development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); embryonic digestive tract development (ortholog); ASSOCIATED WITH Arachnoid Cysts (ortholog); Bone Fractures (ortholog); brachydactyly (ortholog); FOUND IN chromocenter (ortholog); cytoplasm (ortholog); heterochromatin (ortholog) NW_004955433 9146074 9161171 - 102019424 AGCD01031610;GBDI01327095;XM_005388281 XP_005388338 MODEL 8717128 ncrna LOC102005214 uncharacterized LOC102005214 NW_004955451 1877295 1878130 - 102005214 AGCD01042992;GBDF01085621;XR_001235999 MODEL 8805605 protein-coding Nrap nebulin related anchoring protein ENCODES a protein that exhibits actin binding (ortholog); muscle alpha-actinin binding (ortholog); vinculin binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); dilated cardiomyopathy (ortholog); FOUND IN fascia adherens (ortholog); muscle tendon junction (ortholog); myofibril (ortholog) NW_004955431 18604508 18669853 - 102006060 AGCD01030431;GBDJ01240186;XM_005387782;XM_005387785 XP_005387839;XP_005387842 MODEL 8988587 protein-coding Gtf2h4 general transcription factor IIH subunit 4 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN core TFIIH complex portion of holo TFIIH complex (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955583 842750 847575 + 102021293 AGCD01075869;GBBH01207878;GBDJ01180987;XM_005414324 XP_005414381 MODEL 8928062 protein-coding Dusp5 dual specificity phosphatase 5 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of vasoconstriction (ortholog); positive regulation of cerebral blood circulation (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); Brain Injuries (ortholog); Cardiac Fibrosis (ortholog) NW_004955485 914250 927640 - 102016273 AGCD01058466;AGCD01058467;GBBH01223883;GBDF01144994;XM_013504121 XP_013359575 MODEL 9021137 pseudo LOC102003444 vesicle transport through interaction with t-SNAREs homolog 1B pseudogene NW_004955478 11045244 11049588 + 102003444 AGCD01056157 MODEL 8818994 pseudo LOC102022047 centromere protein Q-like NW_004955456 231873 232590 - 102022047 AGCD01046201 MODEL 8856874 protein-coding Tfb2m transcription factor B2, mitochondrial ENCODES a protein that exhibits mitochondrial transcription factor activity (ortholog); INVOLVED IN mitochondrial transcription (ortholog); transcription initiation at mitochondrial promoter (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955406 9424329 9441212 - 102011173 AGCD01005819;AGCD01005820;GBCB01073815;XM_005374792 XP_005374849 MODEL 8733485 protein-coding Lamp1 lysosomal associated membrane protein 1 ENCODES a protein that exhibits enzyme binding (ortholog); ion channel inhibitor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN autophagic cell death (ortholog); establishment of protein localization to organelle (ortholog); Golgi to lysosome transport (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN alveolar lamellar body (ortholog); autolysosome (ortholog); autophagosome membrane (ortholog) NW_004955404 557090 573532 - 102005766 AGCD01003203;GBBH01004584;XM_005373950;XM_005373951 XP_005374007;XP_005374008 MODEL 8855712 protein-coding Slc7a2 solute carrier family 7 member 2 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); high-affinity L-arginine transmembrane transporter activity (ortholog); high-affinity L-ornithine transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); L-alpha-amino acid transmembrane transport (ortholog); L-amino acid transport (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; glutaric aciduria type I pathway; hyperlysinemia pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell junction (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955552 2117972 2141144 - 102023960 AGCD01072802;GBCB01039132;GBDK01322143;XM_013508606 XP_013364060 MODEL 8847004 protein-coding LOC102004517 trace amine-associated receptor 7a-like NW_004955436 13040357 13041557 - 102004517 AGCD01033852;XM_013516593 XP_013372047 MODEL 8721613 ncrna LOC102003450 uncharacterized LOC102003450 NW_004955485 6812985 6814556 - 102003450 AGCD01058629;GBDF01041975;XR_263914 MODEL 8748498 protein-coding Susd3 sushi domain containing 3 ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN plasma membrane (ortholog) NW_004955515 4929803 4949374 - 102024716 AGCD01067333;GBCQ01007351;XM_005408898;XM_013506901 XP_005408955;XP_013362355 MODEL 8775019 protein-coding Lrrc8c leucine rich repeat containing 8 VRAC subunit C ENCODES a protein that exhibits volume-sensitive anion channel activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); cellular response to osmotic stress (ortholog); cyclic-GMP-AMP transmembrane import across plasma membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); multiple sclerosis (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); monoatomic ion channel complex (ortholog) NW_004955423 4460212 4494317 - 102006788 AGCD01023535;GBDI01105547;XM_005385085;XM_013514541 XP_005385142;XP_013369995 MODEL 9052854 ncrna LOC102014104 uncharacterized LOC102014104 NW_004955403 40326703 40371419 - 102014104 AGCD01002681;AGCD01002682;AGCD01002683;GBBH01144739;XR_259234 MODEL 9027402 protein-coding Tnnc1 troponin C1, slow skeletal and cardiac type ENCODES a protein that exhibits actin filament binding (ortholog); calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN cardiac muscle cell contraction (ortholog); cardiac muscle contraction (ortholog); diaphragm contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH cardiomyopathy (ortholog); clear cell renal cell carcinoma (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cardiac Troponin complex (ortholog); contractile muscle fiber (ortholog); troponin complex (ortholog) NW_004955430 2438644 2441596 - 102017148 AGCD01029166;GBDJ01349702;XM_005387319 XP_005387376 MODEL 8767810 protein-coding LOC102015989 olfactory receptor 4E2 ENCODES a protein that exhibits copper ion binding (ortholog); odorant binding (ortholog); olfactory receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception (ortholog); detection of chemical stimulus involved in sensory perception of smell (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955550 2352164 2353090 + 102015989 AGCD01072625;XM_013508556 XP_013364010 MODEL 8999705 ncrna LOC102019134 uncharacterized LOC102019134 NW_004955405 28220948 28224636 + 102019134 AGCD01005233;GBDF01177491;XR_259406 MODEL 39132921 snrna U6 U6 spliceosomal RNA 8999086 protein-coding Il1b interleukin 1 beta ENCODES a protein that exhibits cytokine activity (ortholog); integrin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN astrocyte activation (ortholog); cellular response to antibiotic (ortholog); cellular response to fatty acid (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH otitis media; Otitis Media with Effusion; abdominal aortic aneurysm (ortholog); FOUND IN extracellular region (ortholog); interleukin-1 receptor complex (ortholog); lysosome (ortholog) NW_004955470 1486936 1491888 + 102024552 AGCD01052642;GBCE01179444;XM_005400595 XP_005400652 MODEL 39132756 snrna U6 U6 spliceosomal RNA 39133627 snrna U4 U4 spliceosomal RNA 8893738 protein-coding Tspan32 tetraspanin 32 INVOLVED IN blood coagulation (ortholog); cytoskeleton organization (ortholog); defense response to protozoan (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cell surface (ortholog); integrin alphaIIb-beta3 complex (ortholog) NW_004955422 14101833 14121784 + 102008544 AGCD01022852;GBDK01393243;XM_005384201;XM_005384202 XP_005384258;XP_005384259 MODEL 8784554 protein-coding Glce glucuronic acid epimerase ENCODES a protein that exhibits calcium ion binding (ortholog); heparosan-N-sulfate-glucuronate 5-epimerase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); heparin proteoglycan biosynthetic process (ortholog); negative regulation of cell projection organization (ortholog); ASSOCIATED WITH cerebrovascular disease (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955450 7149721 7226835 - 102017082 AGCD01042533;AGCD01042534;GBDF01051553;XM_005393663;XM_005393664;XM_005393665;XM_005393666 XP_005393720;XP_005393721;XP_005393722;XP_005393723 MODEL 8994646 protein-coding Slc22a15 solute carrier family 22 member 15 ENCODES a protein that exhibits amino-acid betaine transmembrane transporter activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955435 19183832 19260412 + 102028228 AGCD01033422;AGCD01033423;AGCD01033424;GBBH01127158;GBCE01159916;XM_005389035 XP_005389092 MODEL 8838594 protein-coding LOC102021330 olfactory receptor 51A4-like NW_004955414 20549923 20550842 - 102021330 AGCD01015380;XM_013511771 XP_013367225 MODEL 8893761 pseudo LOC102009739 ubiquitin-conjugating enzyme E2 E3 pseudogene NW_004955427 22033843 22034577 - 102009739 AGCD01027464 MODEL 39133136 snrna U6 U6 spliceosomal RNA 8976129 protein-coding LOC102012925 myotubularin-related protein 3 NW_004955455 4120714 4264635 + 102012925 AGCD01045667;AGCD01045668;AGCD01045669;AGCD01045670;AGCD01045671;AGCD01045672;AGCD01045673;GBDF01118467;XM_005396228;XM_005396229;XM_005396230;XM_005396231;XM_005396232;XM_005396233;XM_005396234;XM_005396235;XM_005396237;XM_005396238;XM_005396239 XP_005396285;XP_005396286;XP_005396287;XP_005396288;XP_005396289;XP_005396290;XP_005396291;XP_005396292;XP_005396294;XP_005396295;XP_005396296 MODEL 8928724 pseudo LOC102017928 cyclin-G1 pseudogene NW_004955448 7013104 7014073 + 102017928 AGCD01041398 MODEL 10189012 protein-coding LOC106147315 uncharacterized LOC106147315 NW_004955542 3307426 3324003 - 106147315 AGCD01071550;XM_013508012 XP_013363466 MODEL 8700742 protein-coding LOC102023101 uncharacterized LOC102023101 NW_004955403 1477883 1487353 + 102023101 AGCD01001723;GBDJ01318496;XM_013514706 XP_013370160 MODEL 9039046 pseudo LOC102012573 40S ribosomal protein S11-like NW_004955526 2916961 2917447 + 102012573 AGCD01069324 MODEL 8866090 protein-coding Rab13 RAB13, member RAS oncogene family ENCODES a protein that exhibits cAMP-dependent protein kinase inhibitor activity (ortholog); G protein activity (ortholog); GTP binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); cellular response to insulin stimulus (ortholog); cortical actin cytoskeleton organization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell junction (ortholog); cytoplasmic vesicle (ortholog) NW_004955545 590021 594191 - 102026260 AGCD01071802;GBDJ01137960;XM_005411465;XM_013508365 XP_005411522;XP_013363819 MODEL 8718917 protein-coding Lims2 LIM zinc finger domain containing 2 INVOLVED IN cell-cell adhesion (ortholog); cell-cell junction organization (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2W (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN focal adhesion (ortholog) NW_004955459 2874282 2913956 + 102027722 AGCD01048004;GBCB01111199;XM_005397601;XM_005397602;XM_005397604;XM_013521048 XP_005397658;XP_005397659;XP_005397661;XP_013376502 MODEL 9061955 protein-coding Twist1 twist family bHLH transcription factor 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); bone development (ortholog); cardiac neural crest cell development involved in outflow tract morphogenesis (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acrocephalosyndactylia (ortholog); anaplastic large cell lymphoma (ortholog); breast cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955410 22003981 22005483 - 102027824 AGCD01011066;GBCE01029839;GBDI01384605;XM_005377354 XP_005377411 MODEL 39131560 protein-coding XKR7 XK related 7 8790082 ncrna LOC102020220 uncharacterized LOC102020220 NW_004955409 35001455 35033359 + 102020220 AGCD01010413;GBDF01248623;XR_001232614;XR_259803 MODEL 39132242 snrna U6 U6 spliceosomal RNA 9015682 ncrna LOC102010530 uncharacterized LOC102010530 NW_004955446 355157 517018 + 102010530 AGCD01039940;AGCD01039941;AGCD01039942;AGCD01039943;AGCD01039944;GBDF01235331;XR_001235683;XR_262362 MODEL 8872806 pseudo LOC102009352 DCN1-like protein 5 pseudogene NW_004955456 8139806 8140820 + 102009352 AGCD01046454 MODEL 9067286 protein-coding CUNHXorf65 chromosome unknown CXorf65 homolog ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN gene expression (ortholog); transcription by RNA polymerase II (ortholog); ASSOCIATED WITH high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955475 10674333 10676485 - 102029508 AGCD01055108;GBDF01250388;XM_005401644;XM_005401645;XM_005401646;XM_005401647 XP_005401701;XP_005401702;XP_005401703;XP_005401704 MODEL 8940002 protein-coding Fhit fragile histidine triad diadenosine triphosphatase ENCODES a protein that exhibits adenosine 5'-monophosphoramidase activity (ortholog); adenylylsulfatase activity (ortholog); adenylylsulfate-ammonia adenylyltransferase activity (ortholog); INVOLVED IN diadenosine triphosphate catabolic process (ortholog); DNA replication (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); ASSOCIATED WITH amenorrhea (ortholog); amphetamine abuse (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955430 221518 508094 + 102030107 AGCD01029093;AGCD01029094;AGCD01029095;GBDJ01064341;XM_005387532 XP_005387589 MODEL 8966762 protein-coding Sall2 spalt like transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); protein-containing complex binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN eye development (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH coloboma (ortholog) NW_004955550 2236129 2250829 - 102014613 AGCD01072615;AGCD01072616;GBDF01045984;XM_005412122 XP_005412179 MODEL 8765301 protein-coding LOC102025254 olfactory receptor 2A1/2A42-like NW_004955491 466262 467182 + 102025254 AGCD01060336;XM_005404883 XP_005404940 MODEL 9065567 protein-coding Scgn secretagogin, EF-hand calcium binding protein ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955483 1392772 1429563 - 102003448 AGCD01057645;AGCD01057646;GBDI01027898;XM_005403346 XP_005403403 MODEL 9061414 protein-coding Exoc3l2 exocyst complex component 3 like 2 INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH BRAIN MALFORMATION RENAL SYNDROME (ortholog); Breast Cancer, Familial (ortholog); clubfoot (ortholog) NW_004955555 2260885 2281784 - 102007818 AGCD01073142;AGCD01073143;GBCE01100000;GBCQ01063072;XM_005412504 XP_005412561 MODEL 9045305 protein-coding Gcfc2 GC-rich sequence DNA-binding factor 2 INVOLVED IN spliceosomal complex assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955424 10174291 10202201 + 102015216 AGCD01024507;AGCD01024508;GBDF01307374;XM_005385461;XM_013514701 XP_005385518;XP_013370155 MODEL 8965573 protein-coding LOC102022048 uncharacterized LOC102022048 NW_004955407 40772585 40774323 - 102022048 AGCD01007850;GBCQ01148300;XM_013506362;XR_259635 XP_013361816 MODEL 8879327 pseudo LOC102003785 translocation protein SEC62-like NW_004955426 65589 86951 + 102003785 AGCD01025993 MODEL 155888855 protein-coding SMIM45 small integral membrane protein 45 9000519 protein-coding Tceal9 transcription elongation factor A like 9 ENCODES a protein that exhibits WW domain binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955548 505524 507210 + 102024954 AGCD01072333;GBCQ01122077;XM_005411986;XM_005411987 XP_005412043;XP_005412044 MODEL 8883968 protein-coding Tafa4 TAFA chemokine like family member 4 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN macrophage chemotaxis (ortholog); phagocytosis (ortholog); regulation of membrane potential (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); synaptic vesicle membrane (ortholog) NW_004955421 18920551 19083792 + 102014368 AGCD01022061;GBBH01123399;XM_005383816;XM_013513639;XM_013513640 XP_005383873;XP_013369093;XP_013369094 MODEL 8978065 protein-coding Dmd dystrophin ENCODES a protein that exhibits actin binding (ortholog); dystroglycan binding (ortholog); integrin binding (ortholog); INVOLVED IN apoptotic process (ortholog); bone development (ortholog); cardiac muscle cell action potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); Animal Disease Models (ortholog); FOUND IN astrocyte projection (ortholog); axon (ortholog); cell junction (ortholog) NW_004955535 1283084 3297015 + 102027455 AGCD01070649;AGCD01070650;AGCD01070651;AGCD01070652;AGCD01070653;AGCD01070654;AGCD01070655;AGCD01070656;AGCD01070657;AGCD01070658;AGCD01070659;AGCD01070660;AGCD01070661;AGCD01070662;AGCD01070663;AGCD01070664;AGCD01070665;AGCD01070666;AGCD01070667;AGCD01070668;AGCD01070669;AGCD01070670;AGCD01070671;AGCD01070672;AGCD01070673;AGCD01070674;AGCD01070675;AGCD01070676;AGCD01070677;AGCD01070678;AGCD01070679;AGCD01070680;AGCD01070681;AGCD01070682;AGCD01070683;AGCD01070684;AGCD01070685;AGCD01070686;AGCD01070687;AGCD01070688;AGCD01070689;AGCD01070690;GBCB01005432;XM_005410485;XM_005410486;XM_005410487;XM_005410488;XM_005410489;XM_013507710 XP_005410542;XP_005410543;XP_005410544;XP_005410545;XP_005410546;XP_013363164 MODEL 8811003 protein-coding Siral2 SIR2 antiphage like 2 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955413 29685697 29707860 + 102003643 AGCD01014592;GBDF01193282;GBDJ01075980;XM_013511625;XM_013511626 XP_013367079;XP_013367080 MODEL 8805567 ncrna LOC102005221 uncharacterized LOC102005221 NW_004955454 2294868 2299079 + 102005221 AGCD01045015;GBDI01003932;XR_262766;XR_262767 MODEL 8844224 ncrna LOC102018746 uncharacterized LOC102018746 NW_004955426 16039687 16052875 + 102018746 AGCD01026457;AGCD01026458;AGCD01026459;GBDF01075223;XR_261198 MODEL 8800471 protein-coding LOC102007836 uncharacterized LOC102007836 NW_004955599 462585 469137 + 102007836 AGCD01076650;AGCD01076651;GBDJ01147444;XM_005414765;XR_265153 XP_005414822 MODEL 8823749 protein-coding Bnc1 basonuclin zinc finger protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); rDNA binding (ortholog); INVOLVED IN chromosome organization (ortholog); positive regulation of epithelial cell proliferation (ortholog); positive regulation of oocyte maturation (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); cervical cancer (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955416 13428760 13440837 + 102003125 AGCD01017223;GBBH01128516;XM_005381464 XP_005381521 MODEL 9003061 protein-coding LOC102015992 mesothelin NW_004955442 16439935 16447814 - 102015992 AGCD01037900;GBDK01016442;XM_005391605;XM_013517948;XM_013517949;XM_013517950;XM_013517951;XM_013517952 XP_005391662;XP_013373402;XP_013373403;XP_013373404;XP_013373405;XP_013373406 MODEL 9014741 protein-coding Gtf2h5 general transcription factor IIH subunit 5 INVOLVED IN cellular response to gamma radiation (ortholog); maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); nucleotide-excision repair (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955439 4226530 4234390 - 102014494 AGCD01035706;GBDF01189978;XM_005390529;XM_005390530;XM_013517395 XP_005390586;XP_005390587;XP_013372849 MODEL 8767706 ncrna LOC102012930 uncharacterized LOC102012930 NW_004955408 11342486 11344637 + 102012930 AGCD01008307;GBDF01286807;XR_259678 MODEL 9015681 pseudo LOC102009740 aldose reductase-related protein 2 pseudogene NW_004955428 145019 146060 + 102009740 AGCD01027566 MODEL 8725502 protein-coding Slc22a2 solute carrier family 22 member 2 ENCODES a protein that exhibits acetylcholine transmembrane transporter activity (ortholog); amine transmembrane transporter activity (ortholog); choline transmembrane transporter activity (ortholog); INVOLVED IN acetylcholine transport (ortholog); amine transport (ortholog); amino acid import across plasma membrane (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); clear cell renal cell carcinoma (ortholog); end stage renal disease (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955439 20567241 20608281 + 102012688 AGCD01036118;AGCD01036119;GBCQ01009150;XM_005390703;XM_005390704 XP_005390760;XP_005390761 MODEL 9050514 protein-coding Dusp6 dual specificity phosphatase 6 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of MAPK cascade (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); brain ischemia (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955405 26662018 26666314 - 102014004 AGCD01005204;GBDK01000937;XM_005374434 XP_005374491 MODEL 8718317 pseudo LOC102004518 microfibrillar-associated protein 1 pseudogene NW_004955437 7042525 7045014 + 102004518 AGCD01034448 MODEL 8891028 protein-coding Slc7a3 solute carrier family 7 member 3 ENCODES a protein that exhibits basic amino acid transmembrane transporter activity (ortholog); L-arginine transmembrane transporter activity (ortholog); L-lysine transmembrane transporter activity (ortholog); INVOLVED IN L-arginine import across plasma membrane (ortholog); L-arginine transmembrane transport (ortholog); L-lysine import across plasma membrane (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955475 10457859 10463828 - 102026632 AGCD01055096;GBDJ01316302;XM_005401634 XP_005401691 MODEL 8913213 protein-coding Lamp2 lysosomal associated membrane protein 2 ENCODES a protein that exhibits enzyme binding (ortholog); ion channel inhibitor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN autophagy pathway; chaperone mediated autophagy pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute myeloid leukemia (ortholog); astigmatism (ortholog); FOUND IN autolysosome (ortholog); autophagosome membrane (ortholog); chaperone-mediated autophagy translocation complex (ortholog) NW_004955572 1423048 1464443 + 102004760 AGCD01074953;GBDF01195104;XM_005413661;XM_005413662 XP_005413718;XP_005413719 MODEL 8807488 pseudo LOC102014108 40S ribosomal protein SA-like NW_004955405 2910163 2917915 + 102014108 AGCD01004627 MODEL 8808000 protein-coding Lrrc8d leucine rich repeat containing 8 VRAC subunit D ENCODES a protein that exhibits volume-sensitive anion channel activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); cellular response to osmotic stress (ortholog); cyclic-GMP-AMP transmembrane import across plasma membrane (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955423 4237263 4360352 - 102006476 AGCD01023529;AGCD01023530;AGCD01023531;AGCD01023532;AGCD01023533;GBBH01077207;GBDI01223844;XM_013514441 XP_013369895 MODEL 8903999 protein-coding Susd4 sushi domain containing 4 INVOLVED IN negative regulation of complement activation, alternative pathway (ortholog); negative regulation of complement activation, classical pathway (ortholog); regulation of complement activation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN parallel fiber to Purkinje cell synapse (ortholog); postsynaptic membrane (ortholog) NW_004955520 1444618 1523214 + 102012570 AGCD01068055;AGCD01068056;GBBH01172452;GBDI01353955;XM_005409236;XM_005409237;XM_005409238;XM_005409239 XP_005409293;XP_005409294;XP_005409295;XP_005409296 MODEL 8820574 protein-coding LOC102019137 bcl-2-binding component 3-like NW_004955406 10664969 10668486 - 102019137 AGCD01005868;GBCE01089598;GBCQ01113563;XM_013520537 XP_013375991 MODEL 8989057 protein-coding Xkr7 XK related 7 FOUND IN plasma membrane (ortholog) NW_004955422 29015901 29024414 - 102006042 AGCD01023377;GBDF01135049;XM_013513843 XP_013369297 MODEL 8919417 protein-coding Tnnc2 troponin C2, fast skeletal type ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN regulation of muscle contraction (ortholog); skeletal muscle contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); congenital myopathy 15 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN troponin complex (ortholog) NW_004955445 11466579 11469123 + 102028244 AGCD01039695;GBDJ01423779;XM_005392409 XP_005392466 MODEL 39133628 snrna U4 U4 spliceosomal RNA 8796510 protein-coding Nras NRAS proto-oncogene, GTPase ENCODES a protein that exhibits GTPase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN defense response to protozoan (ortholog); myoblast differentiation (ortholog); negative regulation of skeletal muscle tissue development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); membrane (ortholog) NW_004955435 18001517 18009105 - 102022222 AGCD01033381;GBCC01015651;XM_005389014;XM_013516464;XM_013516465 XP_005389071;XP_013371918;XP_013371919 MODEL 8735886 protein-coding Il1f10 interleukin 1 family member 10 ASSOCIATED WITH stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955470 1198185 1206032 - 102021648 AGCD01052630;GBCC01028004;XM_005400587;XM_013522701 XP_005400644;XP_013378155 MODEL 8993397 protein-coding Tspan33 tetraspanin 33 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN pore complex assembly (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955479 9920192 9941395 + 102007766 AGCD01056508;AGCD01056509;GBCQ01004646;XM_005402406;XM_005402407 XP_005402463;XP_005402464 MODEL 39133137 snrna U6 U6 spliceosomal RNA 8973116 protein-coding Gldc glycine decarboxylase ENCODES a protein that exhibits enzyme binding (ortholog); glycine binding (ortholog); glycine dehydrogenase (decarboxylating) activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); glycine catabolic process (ortholog); glycine decarboxylation via glycine cleavage system (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; ASSOCIATED WITH Apnea (ortholog); benign neonatal seizures (ortholog); cerebral palsy (ortholog); FOUND IN glycine cleavage complex (ortholog); mitochondrion (ortholog) NW_004955434 10431434 10533118 - 102013644 AGCD01032345;AGCD01032346;AGCD01032347;AGCD01032348;AGCD01032349;AGCD01032350;GBCQ01036197;GBDF01249012;XM_005388751 XP_005388808 MODEL 8918502 protein-coding Kiaa0319l KIAA0319 like INVOLVED IN acrosome assembly (ortholog); flagellated sperm motility (ortholog); neuron migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955452 13538524 13649823 - 102019019 AGCD01044421;AGCD01044422;AGCD01044423;AGCD01044424;AGCD01044425;AGCD01044426;AGCD01044427;AGCD01044428;AGCD01044429;GBBH01115551;XM_005395143;XM_005395144;XM_005395145 XP_005395200;XP_005395201;XP_005395202 MODEL 8952288 pseudo LOC102018749 serine/threonine-protein kinase WNK1-like NW_004955427 10801144 10809468 - 102018749 AGCD01027157 MODEL 8792324 pseudo LOC102007837 28S ribosomal protein S31, mitochondrial pseudogene NW_004955402 45114932 45115802 - 102007837 AGCD01001130 MODEL 8791447 ncrna LOC102023102 uncharacterized LOC102023102 NW_004955404 2801452 2805235 - 102023102 AGCD01003265;GBDF01287830;XR_259294 MODEL 8979305 protein-coding Fhl1 four and a half LIM domains 1 ENCODES a protein that exhibits channel activator activity (ortholog); potassium channel activator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); centronuclear myopathy (ortholog); diastolic heart failure (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955489 8888845 8944778 - 102014909 AGCD01060024;GBCQ01006174;XM_005404596;XM_005404598;XM_013504495;XM_013504496 XP_005404653;XP_005404655;XP_013359949;XP_013359950 MODEL 8714317 protein-coding Tfcp2 transcription factor CP2 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955547 1608631 1675331 - 102021920 AGCD01072234;AGCD01072235;AGCD01072236;AGCD01072237;AGCD01072238;AGCD01072239;GBDI01324425;GBDJ01132761;XM_005411895 XP_005411952 MODEL 8902431 ncrna LOC102017938 uncharacterized LOC102017938 NW_004955667 50137 52914 - 102017938 AGCD01077927;AGCD01077928;GBDI01252369;XR_265181 MODEL 10280164 ncrna LOC106147316 uncharacterized LOC106147316 NW_004955542 2439850 2442344 + 106147316 AGCD01071522;GBDJ01383621;XR_001232157 MODEL 8840939 protein-coding Gcg glucagon ENCODES a protein that exhibits gastric inhibitory polypeptide receptor binding (ortholog); glucagon receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN positive regulation of adenylate cyclase activity; adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN forkhead class A signaling pathway; glucagon signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); Alzheimer's disease (ortholog); Anorexia (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955449 11708152 11716429 + 102018785 AGCD01042092;XM_005393317;XM_013518788 XP_005393374;XP_013374242 MODEL 8825900 protein-coding Gtf2i general transcription factor IIi ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); mitogen-activated protein kinase binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of angiogenesis (ortholog); negative regulation of cytosolic calcium ion concentration (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); autism spectrum disorder (ortholog); FOUND IN neuronal cell body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955456 13371306 13461846 - 102015286 AGCD01046587;AGCD01046588;AGCD01046589;AGCD01046590;GBCC01021827;XM_005396738;XM_005396739;XM_005396740;XM_005396741;XM_005396742;XM_005396743;XM_005396744;XM_005396746;XM_013520536 XP_005396795;XP_005396796;XP_005396797;XP_005396798;XP_005396799;XP_005396800;XP_005396801;XP_005396803;XP_013375990 MODEL 8719548 protein-coding Twist2 twist family bHLH transcription factor 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN cornea development in camera-type eye (ortholog); embryonic cranial skeleton morphogenesis (ortholog); face morphogenesis (ortholog); ASSOCIATED WITH ablepharon macrostomia syndrome (ortholog); Barber-Say syndrome (ortholog); Focal Facial Dermal Dysplasia (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955542 1959765 2000665 - 102023744 AGCD01071509;GBBH01091431;GBCE01029840;XM_005411181 XP_005411238 MODEL 9013525 protein-coding LOC102020223 speedy protein E4-like NW_004955460 10642484 10644532 - 102020223 AGCD01048597;XM_005397967 XP_005398024 MODEL 8886161 pseudo LOC102010531 60S ribosomal protein L37 pseudogene NW_004955446 2571700 2571990 + 102010531 AGCD01039985 MODEL 39132922 snrna U6 U6 spliceosomal RNA 39132757 snrna U6 U6 spliceosomal RNA 39132246 snrna U6 U6 spliceosomal RNA 8928427 protein-coding LOC102004531 uncharacterized LOC102004531 NW_004955447 9636461 9712154 + 102004531 AGCD01040865;AGCD01040866;XM_005392954 XP_005393011 MODEL 9035010 ncrna LOC102025255 uncharacterized LOC102025255 NW_004955422 16465199 16472125 + 102025255 AGCD01022898;GBCE01047979;XR_260891 MODEL 8920562 protein-coding Xkr8 XK related 8 ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); INVOLVED IN engulfment of apoptotic cell (ortholog); neutrophil clearance (ortholog); phosphatidylserine exposure on apoptotic cell surface (ortholog); ASSOCIATED WITH lung cancer (ortholog); thymoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955452 7141088 7148571 + 102018681 AGCD01044136;AGCD01044137;GBBH01041411;GBDF01195794;XM_013519543 XP_013374997 MODEL 8970631 ncrna LOC102003456 uncharacterized LOC102003456 NW_004955492 6404109 6413616 + 102003456 AGCD01060766;GBDF01016640;XR_001231259;XR_001231260;XR_264055 MODEL 8834957 protein-coding Bnc2 basonuclin zinc finger protein 2 ENCODES a protein that exhibits DNA binding (ortholog); rDNA binding (ortholog); INVOLVED IN endochondral bone growth (ortholog); mesenchyme development (ortholog); roof of mouth development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); fibrillar center (ortholog); nuclear body (ortholog) NW_004955434 19156746 19568983 - 102021793 AGCD01032583;AGCD01032584;AGCD01032585;AGCD01032586;AGCD01032587;AGCD01032588;AGCD01032589;GBDJ01273240;XM_005388715;XM_005388716;XM_005388717;XM_005388718;XM_005388719;XM_013516364;XM_013516365 XP_005388772;XP_005388773;XP_005388774;XP_005388775;XP_005388776;XP_013371818;XP_013371819 MODEL 8835764 protein-coding LOC102022049 uncharacterized LOC102022049 NW_004955407 41023365 41029770 - 102022049 AGCD01007854;XM_005375988 XP_005376045 MODEL 9058092 pseudo LOC102018751 protein DBF4 homolog A pseudogene NW_004955428 18917893 18919918 - 102018751 AGCD01028074 MODEL 8953899 protein-coding Rab14 RAB14, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN apical protein localization (ortholog); body fluid secretion (ortholog); early endosome to Golgi transport (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN alveolar lamellar body (ortholog); apical plasma membrane (ortholog); cilium (ortholog) NW_004955419 6790110 6812870 + 102018832 AGCD01019864;AGCD01019865;GBDF01058003;XM_005382571;XM_005382572 XP_005382628;XP_005382629 MODEL 8920724 protein-coding Tceanc transcription elongation factor A N-terminal and central domain containing ASSOCIATED WITH acute myeloid leukemia (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955519 4532687 4537928 - 102027446 AGCD01067985;GBDI01161967;XM_005409207 XP_005409264 MODEL 8755020 pseudo LOC102021335 interferon alpha-4-like NW_004955472 12915361 12916194 + 102021335 AGCD01053825 MODEL 8906171 protein-coding CUNHXorf66 chromosome unknown CXorf66 homolog ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955489 5318531 5327883 + 102030639 AGCD01059934;AGCD01059935;GBDF01195698;XM_005404549 XP_005404606 MODEL 8923676 protein-coding Dmgdh dimethylglycine dehydrogenase ENCODES a protein that exhibits dimethylglycine dehydrogenase activity (ortholog); flavin adenine dinucleotide binding (ortholog); folic acid binding (ortholog); INVOLVED IN choline catabolic process (ortholog); tetrahydrofolate interconversion (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); dimethylglycine dehydrogenase deficiency (ortholog); FOUND IN mitochondrion (ortholog) NW_004955425 22045977 22103381 + 102025029 AGCD01025813;AGCD01025814;AGCD01025815;GBCQ01038360;XM_013514886 XP_013370340 MODEL 9005190 protein-coding Twnk twinkle mtDNA helicase ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); DNA helicase activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); DNA replication (ortholog); DNA-templated DNA replication (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); Ataxia (ortholog); Auditory Neuropathy (ortholog); FOUND IN mitochondrial chromosome (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955485 9193838 9198697 - 102030199 AGCD01058752;GBBH01101422;XM_005403885;XM_005403886 XP_005403942;XP_005403943 MODEL 8750630 pseudo LOC102015996 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like pseudogene NW_004955446 17831268 17845230 - 102015996 AGCD01040386;XM_005392759 MODEL 8767685 protein-coding Sirpa signal regulatory protein alpha ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); GTPase regulator activity (ortholog); protein antigen binding (ortholog); INVOLVED IN actin filament organization (ortholog); cell migration (ortholog); cell motility (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955415 13030752 13072735 + 102011533 AGCD01016239;AGCD01016240;AGCD01016241;AGCD01016242;GBBH01061866;XM_005380740;XM_005380741;XM_005380742;XM_013512244;XM_013512245 XP_005380797;XP_005380798;XP_005380799;XP_013367698;XP_013367699 MODEL 8979015 protein-coding Il1r1 interleukin 1 receptor type 1 ENCODES a protein that exhibits interleukin-1 binding (ortholog); interleukin-1 receptor activity (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); heat acclimation (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); aortic dissection (ortholog); Bacterial Keratitis (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955470 7685498 7703374 + 102029851 AGCD01052803;GBDJ01419739;XM_005400837 XP_005400894 MODEL 9014372 protein-coding Lin28a lin-28 RNA binding posttranscriptional regulator A ENCODES a protein that exhibits G-quadruplex RNA binding (ortholog); miRNA binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); germ cell development (ortholog); miRNA catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); disease of cellular proliferation (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955452 5793583 5808662 + 102017624 AGCD01044055;GBDF01079508;XM_005394857 XP_005394914 MODEL 8823883 protein-coding Exoc3l4 exocyst complex component 3 like 4 ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog) NW_004955538 2140599 2155781 + 102006709 AGCD01071101;AGCD01071102;GBDI01338301;XM_005410766;XM_005410767;XM_005410768;XM_005410769;XM_005410770;XM_005410771 XP_005410823;XP_005410824;XP_005410825;XP_005410826;XP_005410827;XP_005410828 MODEL 8719926 pseudo LOC102012938 60S ribosomal protein L37a-like NW_004955464 13764223 13764774 + 102012938 AGCD01050293 MODEL 8970117 protein-coding Kiaa0408 KIAA0408 ortholog NW_004955436 8452558 8471086 - 102008977 AGCD01033742;GBCB01089871;XM_005389171;XM_013516630 XP_005389228;XP_013372084 MODEL 8757043 ncrna LOC102023105 uncharacterized LOC102023105 NW_004955405 9650121 9655145 - 102023105 AGCD01004786;GBDF01146714;XR_001235294 MODEL 8984666 protein-coding Slc22a20 solute carrier family 22 member 20 NW_004955422 19979250 20005115 - 102013181 AGCD01023052;AGCD01023053;AGCD01023054;AGCD01023055;AGCD01023056;AGCD01023057;GBDF01294741;XM_005384507 XP_005384564 MODEL 8860222 pseudo LOC102014111 ribosome biogenesis protein BRX1 homolog NW_004955454 15678137 15679272 - 102014111 AGCD01045496 MODEL 8744555 protein-coding Dusp7 dual specificity phosphatase 7 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955532 3685137 3691933 - 102026152 AGCD01070294;GBCB01023261;GBCE01096661;XM_005410343 XP_005410400 MODEL 8703281 protein-coding Slc7a4 solute carrier family 7 member 4 ENCODES a protein that exhibits L-leucine transmembrane transporter activity (ortholog); INVOLVED IN L-leucine import across plasma membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955442 19258901 19263317 + 102020617 AGCD01038045;GBDF01126826;XM_005391817;XM_005391818 XP_005391874;XP_005391875 MODEL 10138066 ncrna LOC106147317 uncharacterized LOC106147317 NW_004955542 2525563 2527248 + 106147317 AGCD01071524;XR_001232159 MODEL 8974723 ncrna LOC102009353 uncharacterized LOC102009353 NW_004955408 30404465 30505925 + 102009353 AGCD01008807;AGCD01008808;AGCD01008809;GBDI01286730;XR_001231749;XR_001231750;XR_259727 MODEL 8740610 protein-coding Lrrc8e leucine rich repeat containing 8 VRAC subunit E ENCODES a protein that exhibits volume-sensitive anion channel activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); cell volume homeostasis (ortholog); cellular response to osmotic stress (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog) NW_004955563 1362266 1370221 - 102020297 AGCD01074144;GBDK01117974;XM_005413146;XM_005413147;XM_013509174 XP_005413203;XP_005413204;XP_013364628 MODEL 8807977 protein-coding Lamp3 lysosome associated membrane protein 3 INVOLVED IN lipid metabolic process (ortholog); negative regulation of proteasomal protein catabolic process (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); Funnel Chest (ortholog); FOUND IN alveolar lamellar body membrane (ortholog); cell surface (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955420 24155793 24185366 + 102005941 AGCD01021276;AGCD01021277;AGCD01021278;AGCD01021279;AGCD01021280;AGCD01021281;AGCD01021282;GBDK01015482;XM_005383369;XM_005383370;XM_005383371 XP_005383426;XP_005383427;XP_005383428 MODEL 8931661 pseudo LOC102020227 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955465 4834420 4837196 - 102020227 AGCD01050417 MODEL 9019269 protein-coding LOC102005225 SEC14-like protein 4 NW_004955455 4754888 4766499 - 102005225 AGCD01045688;GBDK01339586;XM_013520306 XP_013375760 MODEL 39133629 snrna U4 U4 spliceosomal RNA 9030839 protein-coding Susd5 sushi domain containing 5 INVOLVED IN Notch signaling pathway (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955421 417061 475387 - 102027077 AGCD01021560;AGCD01021561;GBCE01120145;XM_013513642 XP_013369096 MODEL 9009179 protein-coding Sall3 spalt like transcription factor 3 INVOLVED IN forelimb morphogenesis (ortholog); hindlimb morphogenesis (ortholog); negative regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Burkitt lymphoma (ortholog); cervical cancer (ortholog) NW_004955402 62157988 62163977 + 102022445 AGCD01001636;GBCQ01019586;XM_005373104 XP_005373161 MODEL 9026073 ncrna LOC102004534 uncharacterized LOC102004534 NW_004955402 4403382 4407335 + 102004534 AGCD01000122;GBCQ01155602;XR_259024;XR_259025 MODEL 8757824 protein-coding Rab15 RAB15, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN positive regulation of regulated secretory pathway (ortholog); receptor-mediated endocytosis (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); endosome membrane (ortholog) NW_004955466 4958414 4981464 + 102025224 AGCD01050864;GBBH01091286;XM_005399114;XR_001236781 XP_005399171 MODEL 8710924 protein-coding Schip1 schwannomin interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN estrogen metabolic process (ortholog); face morphogenesis (ortholog); female gonad development (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955448 10364261 10502799 + 102029245 AGCD01041490;AGCD01041491;AGCD01041492;AGCD01041493;GBDK01070603;XM_005393115;XM_005393116;XM_005393117 XP_005393172;XP_005393173;XP_005393174 MODEL 39133139 snrna U6 U6 spliceosomal RNA 8976681 ncrna LOC102003787 uncharacterized LOC102003787 NW_004955505 1073276 1075559 - 102003787 AGCD01064967;GBDF01042900;XR_264300 MODEL 8812279 protein-coding LOC102020241 olfactory receptor 52B4-like NW_004955414 20006584 20007528 + 102020241 AGCD01015350;XM_005380461 XP_005380518 MODEL 8792457 ncrna LOC102012575 uncharacterized LOC102012575 NW_004955437 2310695 2312191 + 102012575 AGCD01034263;XR_261833 MODEL 8763593 ncrna LOC102009741 uncharacterized LOC102009741 NW_004955509 2061123 2079468 + 102009741 AGCD01065988;XR_001231659;XR_264399 MODEL 8951256 protein-coding LOC102007838 vomeronasal type-1 receptor 2-like NW_004955603 405739 406635 + 102007838 AGCD01076843;XM_005414838 XP_005414895 MODEL 8939963 protein-coding Fhl2 four and a half LIM domains 2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); identical protein binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN atrial cardiac muscle cell development (ortholog); heart trabecula formation (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Cardiomegaly (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) NW_004955470 10240117 10286117 - 102028405 AGCD01052859;AGCD01052860;GBCQ01085852;XM_005400786;XM_005400787;XM_005400788;XM_013522764;XM_013522765 XP_005400843;XP_005400844;XP_005400845;XP_013378218;XP_013378219 MODEL 8718174 protein-coding Xkr9 XK related 9 ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); INVOLVED IN phosphatidylserine exposure on apoptotic cell surface (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955444 9027662 9059911 - 102029130 AGCD01038953;AGCD01038954;AGCD01038955;AGCD01038956;GBCQ01014012;XM_005392101;XM_005392102;XM_013518143;XM_013518144;XM_013518145 XP_005392158;XP_005392159;XP_013373597;XP_013373598;XP_013373599 MODEL 8766123 protein-coding Sirt1 sirtuin 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); caspase binding (ortholog); deacetylase activity (ortholog); INVOLVED IN angiogenesis (ortholog); behavioral response to starvation (ortholog); cardiac muscle cell apoptotic process (ortholog); PARTICIPATES IN histone modification pathway; hypoxia inducible factor pathway; p53 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN axon (ortholog); chromatin (ortholog); chromatin silencing complex (ortholog) NW_004955425 20280725 20307663 + 102003783 AGCD01025726;AGCD01025727;AGCD01025728;GBCE01123136;GBDF01081323;XM_013514840 XP_013370294 MODEL 8787493 protein-coding Bnip1 BCL2 interacting protein 1 ENCODES a protein that exhibits calcium-induced calcium release activity (ortholog); SNAP receptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic process in response to mitochondrial fragmentation (ortholog); endoplasmic reticulum membrane fusion (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Down syndrome (ortholog); FOUND IN COPI-coated vesicle (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955408 25774305 25788802 + 102029267 AGCD01008652;GBDF01126859;XM_005376349 XP_005376406 MODEL 9027570 protein-coding Gcgr glucagon receptor ENCODES a protein that exhibits glucagon receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cellular response to glucagon stimulus (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; glucagon signaling pathway; ASSOCIATED WITH ACTH-independent macronodular adrenal hyperplasia 1 (ortholog); Mahvash disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) NW_004955506 1340410 1348028 - 102027766 AGCD01065257;GBDK01432119;XM_013506127;XM_013506128;XM_013506129;XM_013506131;XM_013506132;XM_013506133;XM_013506134;XM_013506135;XM_013506136;XM_013506137 XP_013361581;XP_013361582;XP_013361583;XP_013361585;XP_013361586;XP_013361587;XP_013361588;XP_013361589;XP_013361590;XP_013361591 MODEL 8826011 protein-coding Gtf2ird1 GTF2I repeat domain containing 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); transition between slow and fast fiber (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Childhood Schizophrenia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955456 13494644 13564826 - 102017305 AGCD01046599;AGCD01046600;AGCD01046601;GBBH01062345;XM_005396750;XM_013520578;XM_013520579;XM_013520580 XP_005396807;XP_013376032;XP_013376033;XP_013376034 MODEL 8998209 pseudo LOC102019143 ubiquitin-60S ribosomal protein L40 pseudogene NW_004955407 36420998 36445058 - 102019143 AGCD01007767;AGCD01007768 MODEL 8866504 protein-coding Tnni1 troponin I1, slow skeletal type INVOLVED IN transition between fast and slow fiber (ortholog); ventricular cardiac muscle tissue morphogenesis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN troponin complex (ortholog) NW_004955406 37535397 37554868 - 102015690 AGCD01006576;GBCB01024722;XM_013522223;XM_013522227 XP_013377677;XP_013377681 MODEL 8747177 protein-coding Nrbf2 nuclear receptor binding factor 2 ENCODES a protein that exhibits nuclear receptor binding (ortholog); INVOLVED IN autophagy (ortholog); positive regulation of DNA-templated transcription (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); phosphatidylinositol 3-kinase complex, class III (ortholog) NW_004955425 16330115 16336798 + 102020464 AGCD01025600;GBBH01032280;GBCQ01000405;XM_013514912 XP_013370366 MODEL 8905333 ncrna LOC102021336 uncharacterized LOC102021336 NW_004955415 19026977 19033625 - 102021336 AGCD01016460;GBDF01278713;XR_260302 MODEL 8833633 protein-coding Tspan4 tetraspanin 4 ENCODES a protein that exhibits antigen binding (ortholog); integrin binding (ortholog); INVOLVED IN mitocytosis (ortholog); protein-containing complex assembly (ortholog); regulation of mitochondrial membrane potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN migrasome (ortholog); plasma membrane (ortholog); vesicle (ortholog) NW_004955476 11277881 11291008 - 102007656 AGCD01055446;AGCD01055447;GBDK01000814;XM_005401804;XM_005401805;XM_013502958 XP_005401861;XP_005401862;XP_013358412 MODEL 8739921 protein-coding Cuta cutA divalent cation tolerance homolog ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog) NW_004955437 1947139 1948657 - 102005747 AGCD01034245;GBDK01069771;XM_005389493;XM_005389494;XM_013516769 XP_005389550;XP_005389551;XP_013372223 MODEL 8886609 protein-coding Dmkn dermokine INVOLVED IN cornified envelope assembly (ortholog); establishment of skin barrier (ortholog); gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955468 4724652 4738556 - 102019377 AGCD01051919;GBDI01255898;XM_005400058;XM_013522526;XM_013522527;XM_013522528;XM_013522529;XM_013522530 XP_005400115;XP_013377980;XP_013377981;XP_013377982;XP_013377983;XP_013377984 MODEL 8895018 protein-coding Gldn gliomedin ENCODES a protein that exhibits protein binding involved in heterotypic cell-cell adhesion (ortholog); INVOLVED IN clustering of voltage-gated sodium channels (ortholog); microvillus organization (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955409 3128718 3179083 - 102023122 AGCD01009235;GBCE01009115;GBDJ01030054;XM_013510288 XP_013365742 MODEL 9008564 pseudo LOC102003467 laccase domain-containing protein 1 pseudogene NW_004955425 25984730 25986065 - 102003467 AGCD01025940 MODEL 8890070 pseudo LOC102022051 methionine aminopeptidase 2-like NW_004955408 16895723 16898339 + 102022051 AGCD01008448 MODEL 39131454 protein-coding LIN28B lin-28 homolog B 8749244 protein-coding LOC102018754 vomeronasal type-1 receptor 90-like NW_004955429 12434233 12435165 + 102018754 AGCD01028716;XM_005387250 XP_005387307 MODEL 8753054 protein-coding Tfcp2l1 transcription factor CP2 like 1 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cytoplasm organization (ortholog); determination of adult lifespan (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic kidney disease (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); nucleus (ortholog) NW_004955459 8657188 8716878 + 102015292 AGCD01048145;GBCQ01006055;XM_005397647;XM_005397648 XP_005397704;XP_005397705 MODEL 8858898 pseudo LOC102023107 corepressor interacting with RBPJ 1 pseudogene NW_004955405 17684218 17787002 - 102023107 AGCD01005002;AGCD01005003;AGCD01005004;AGCD01005005;AGCD01005006;AGCD01005007;AGCD01005008 MODEL 39132758 snrna U6 U6 spliceosomal RNA 9066213 ncrna LOC102010532 uncharacterized LOC102010532 NW_004955447 16858642 16860472 - 102010532 AGCD01041110;GBDF01286927;XR_001235700 MODEL 9008872 protein-coding Kiaa0513 KIAA0513 ortholog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955541 437106 476131 + 102016197 AGCD01071352;GBDF01280306;XM_005410968;XM_005410969 XP_005411025;XP_005411026 MODEL 8975162 protein-coding Dusp8 dual specificity phosphatase 8 ENCODES a protein that exhibits phosphatase activity (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway NW_004955476 10816647 10826787 + 102029618 AGCD01055431;GBCE01057397;GBDF01144903;XM_013503009 XP_013358463 MODEL 8903857 ncrna LOC102005231 uncharacterized LOC102005231 NW_004955458 14978213 15025603 - 102005231 AGCD01047858;AGCD01047859;AGCD01047860;GBDF01226889;XR_001236482;XR_263001 MODEL 9020399 protein-coding LOC102025258 taste receptor type 2 member 143-like NW_004955494 228691 229575 - 102025258 AGCD01061370;XM_005405524 XP_005405581 MODEL 9027800 protein-coding Tafa5 TAFA chemokine like family member 5 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); negative regulation of vascular associated smooth muscle cell migration (ortholog); negative regulation of vascular associated smooth muscle cell proliferation (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955413 32094438 32200276 + 102015305 AGCD01014637;AGCD01014638;GBCE01064957;GBDJ01030688;XM_005379522;XM_013511696 XP_005379579;XP_013367150 MODEL 8781685 ncrna LOC102021338 uncharacterized LOC102021338 NW_004955478 2711040 2718852 + 102021338 AGCD01055802;GBDF01209257;XR_001230835;XR_263687 MODEL 9057252 protein-coding Sall4 spalt like transcription factor 4 INVOLVED IN embryonic limb morphogenesis (ortholog); gene expression (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); congenital heart disease (ortholog); FOUND IN heterochromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955445 6824797 6841141 + 102017823 AGCD01039521;AGCD01039522;GBDF01028383;XM_005392290 XP_005392347 MODEL 9032521 protein-coding Il1r2 interleukin 1 receptor type 2 ENCODES a protein that exhibits interleukin-1 binding (ortholog); interleukin-1 receptor activity (ortholog); INVOLVED IN negative regulation of cytokine production involved in inflammatory response (ortholog); negative regulation of interleukin-1 alpha production (ortholog); negative regulation of interleukin-1-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); aggressive periodontitis (ortholog); allergic disease (ortholog); FOUND IN cytoplasm (ortholog); interleukin-1 receptor complex (ortholog) NW_004955470 7518565 7562219 + 102018381 AGCD01052798;AGCD01052799;AGCD01052800;GBBH01144026;XM_005400763;XM_005400764;XM_005400766;XM_013522801;XM_013522802;XM_013522803;XR_001237023 XP_005400820;XP_005400821;XP_005400823;XP_013378255;XP_013378256;XP_013378257 MODEL 8959313 ncrna LOC102012948 uncharacterized LOC102012948 NW_004955469 10456258 10462046 - 102012948 AGCD01052535;GBCE01121126;XR_001236982;XR_001236983;XR_263447 MODEL 39132256 snrna U6 U6 spliceosomal RNA 39132924 snrna U6 U6 spliceosomal RNA 9051090 protein-coding LOC102007845 cadherin-4 NW_004956069 2464 8492 + 102007845 AGCD01078992;GBDF01207475;XM_005415167 XP_005415224 MODEL 8865495 ncrna LOC102014112 uncharacterized LOC102014112 NW_004955455 1017376 1026939 - 102014112 AGCD01045567;GBDF01192295;XR_262807 MODEL 8910150 protein-coding Smim48 small integral membrane protein 48 FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955467 10845588 10847304 - 102029492 AGCD01051586;GBDK01281126;XM_005399651;XM_013522024 XP_005399708;XP_013377478 MODEL 8863519 protein-coding Slc22a23 solute carrier family 22 member 23 ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); esophageal cancer (ortholog) NW_004955465 9840017 10006114 + 102024102 AGCD01050496;AGCD01050497;AGCD01050498;GBBH01214447;GBDF01050917;XM_005398990;XR_001236751;XR_001236752 XP_005399047 MODEL 9036708 protein-coding Tceanc2 transcription elongation factor A N-terminal and central domain containing 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955464 5151999 5193217 - 102005683 AGCD01049999;AGCD01050000;AGCD01050001;GBCB01059793;XM_013521708;XM_013521709;XM_013521710 XP_013377162;XP_013377163;XP_013377164 MODEL 8787312 protein-coding Slc7a5 solute carrier family 7 member 5 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); antiporter activity (ortholog); aromatic amino acid transmembrane transporter activity (ortholog); INVOLVED IN alanine transport (ortholog); amino acid import across plasma membrane (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); allergic contact dermatitis (ortholog); autism spectrum disorder (ortholog); FOUND IN amino acid transport complex (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) NW_004955541 2103437 2129668 - 102024849 AGCD01071400;GBBH01118047;GBDF01126154;XM_013508008 XP_013363462 MODEL 8877928 protein-coding Bnip2 BCL2 interacting protein 2 INVOLVED IN blastocyst development (ortholog); centrosome cycle (ortholog); positive regulation of MAPK cascade (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); Mesothelioma (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 15157411 15180069 + 102011383 AGCD01042782;AGCD01042783;GBDF01002691;XM_005393826;XM_005393827 XP_005393883;XP_005393884 MODEL 8792267 protein-coding Lrrcc1 leucine rich repeat and coiled-coil centrosomal protein 1 ASSOCIATED WITH basal cell carcinoma (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN centrosome (ortholog) NW_004955417 3082821 3115136 + 102029623 AGCD01017904;GBDF01044023;XM_005381735;XM_005381737;XM_005381738;XM_013512797;XM_013512798 XP_005381792;XP_005381794;XP_005381795;XP_013368251;XP_013368252 MODEL 8733166 protein-coding Lamp5 lysosomal associated membrane protein family member 5 INVOLVED IN presynaptic modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); developmental and epileptic encephalopathy 12 (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); dendrite membrane (ortholog); early endosome membrane (ortholog) NW_004955415 19488533 19502599 + 102022494 AGCD01016470;GBDJ01037029;XM_005380867 XP_005380924 MODEL 9002653 protein-coding Twsg1 twisted gastrulation BMP signaling modulator 1 ENCODES a protein that exhibits heparin binding (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); camera-type eye development (ortholog); cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); holoprosencephaly (ortholog); Jaw Abnormalities (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955402 2652020 2685350 - 102024864 AGCD01000086;GBCE01001631;GBDK01185816;XM_013515722 XP_013371176 MODEL 8959390 ncrna LOC102016000 uncharacterized LOC102016000 NW_004955449 11115326 11118395 - 102016000 AGCD01042083;GBDF01178343;XR_262497 MODEL 8896992 protein-coding Rab17 RAB17, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTPase activity (ortholog); INVOLVED IN anterograde dendritic transport (ortholog); cilium assembly (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); dendrite (ortholog) NW_004955542 2751953 2759661 + 102016749 AGCD01071536;AGCD01071537;XM_005411250 XP_005411307 MODEL 8701106 protein-coding Scimp SLP adaptor and CSK interacting membrane protein ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN cellular response to molecule of fungal origin (ortholog); positive regulation of cytokine production involved in immune response (ortholog); positive regulation of dendritic cell cytokine production (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN filopodium (ortholog); immunological synapse (ortholog); leading edge membrane (ortholog) NW_004955467 10547706 10578355 - 102012180 AGCD01051575;AGCD01051576;AGCD01051577;GBDI01384955;XM_013522267;XM_013522268 XP_013377721;XP_013377722 MODEL 8744866 protein-coding Slc22a3 solute carrier family 22 member 3 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); dopamine:sodium symporter activity (ortholog); monoamine transmembrane transporter activity (ortholog); INVOLVED IN catecholamine uptake (ortholog); cellular detoxification (ortholog); choline transport (ortholog); PARTICIPATES IN lamivudine pharmacokinetics pathway; metformin pharmacokinetics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Coxsackievirus Infections (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); endomembrane system (ortholog) NW_004955439 20367324 20476891 - 102012365 AGCD01036111;AGCD01036112;AGCD01036113;AGCD01036114;GBBH01205688;GBDJ01352885;XM_005390702 XP_005390759 MODEL 8755437 protein-coding Nrbp1 nuclear receptor binding protein 1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); epithelial cell differentiation (ortholog); epithelial cell proliferation (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); endomembrane system (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955469 9396464 9416569 + 102006017 AGCD01052501;AGCD01052502;AGCD01052503;GBDF01003891;XM_005400506 XP_005400563 MODEL 10303346 ncrna LOC102004537 uncharacterized LOC102004537 NW_004955450 329137 331150 - 102004537 AGCD01042328;GBDF01061386;XR_001235908;XR_001235909 MODEL 8727687 protein-coding LOC102017939 olfactory receptor 6C75-like NW_004956324 2385 3341 + 102017939 AGCD01079433;XM_005415195 XP_005415252 MODEL 8874955 pseudo LOC102020243 40S ribosomal protein SA-like NW_004955475 371163 378458 + 102020243 AGCD01054687 MODEL 8826450 protein-coding Exoc4 exocyst complex component 4 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); PDZ domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); cilium assembly (ortholog); establishment of cell polarity (ortholog); PARTICIPATES IN E-cadherin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Colorectal Cancer 10 (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); cell leading edge (ortholog); centrosome (ortholog) NW_004955410 33937825 34672790 - 102005013 AGCD01011393;AGCD01011394;AGCD01011395;AGCD01011396;AGCD01011397;AGCD01011398;AGCD01011399;AGCD01011400;AGCD01011401;AGCD01011402;AGCD01011403;GBCE01044996;XM_005377540;XM_013510636 XP_005377597;XP_013366090 MODEL 8805200 protein-coding Cutc cutC copper transporter ENCODES a protein that exhibits copper ion binding (ortholog); INVOLVED IN protein tetramerization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955507 5617595 5664131 + 102016622 AGCD01065680;AGCD01065681;AGCD01065682;AGCD01065683;AGCD01065684;GBDF01308367;XM_005407673;XM_005407674;XM_005407675;XM_005407676;XM_013506197;XM_013506198;XR_001231629;XR_001231630 XP_005407730;XP_005407731;XP_005407732;XP_005407733;XP_013361651;XP_013361652 MODEL 8757427 ncrna LOC102012577 uncharacterized LOC102012577 NW_004955437 7996387 8008061 - 102012577 AGCD01034476;GBDF01158367;XR_261866 MODEL 8865511 pseudo LOC102003469 integrator complex subunit 10-like NW_004955426 26056064 26062306 + 102003469 AGCD01026736;AGCD01026737 MODEL 10339733 ncrna LOC106147318 uncharacterized LOC106147318 NW_004955542 2633777 2644461 + 106147318 AGCD01071530;GBDF01208959;XR_001232161 MODEL 9036914 pseudo LOC102009355 transcription elongation factor B polypeptide 1 pseudogene NW_004955459 15151409 15153569 + 102009355 AGCD01048312 MODEL 9022110 protein-coding Fhl3 four and a half LIM domains 3 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); stress fiber (ortholog) NW_004955452 15718832 15721697 - 102016662 AGCD01044495;GBDF01276712;GBDK01320683;XM_013519692 XP_013375146 MODEL 9032618 pseudo LOC102021342 60S ribosomal protein L7 pseudogene NW_004955416 31233424 31238297 + 102021342 AGCD01017729 MODEL 8927624 protein-coding Samd1 sterile alpha motif domain containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); low-density lipoprotein particle binding (ortholog); INVOLVED IN foam cell differentiation (ortholog); lipoprotein lipid oxidation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN chromosome (ortholog); extracellular region (ortholog); nucleus (ortholog) NW_004955415 32789937 32791421 - 102016804 AGCD01016733;GBCB01057825;GBCQ01129414;XM_013512353 XP_013367807 MODEL 8939234 protein-coding Lin28b lin-28 RNA binding posttranscriptional regulator B ENCODES a protein that exhibits RNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN miRNA catabolic process (ortholog); negative regulation of pre-miRNA processing (ortholog); negative regulation of primary miRNA processing (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); lung cancer (ortholog); Neoplastic Cell Transformation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955411 30381208 30499678 + 102029161 AGCD01012257;GBDF01020583;XM_013510789 XP_013366243 MODEL 39132759 snrna U6 U6 spliceosomal RNA 8711925 pseudo LOC102010533 olfactory receptor 2B6-like NW_004955576 1225109 1226068 - 102010533 AGCD01075364;XM_005413950 MODEL 8976208 protein-coding Gtf3a general transcription factor IIIA ENCODES a protein that exhibits 5S rRNA binding (ortholog); DNA binding (ortholog); RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN ribosomal large subunit biogenesis (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955497 6836568 6852177 + 102015124 AGCD01062650;AGCD01062651;GBCQ01069312;XM_013505454 XP_013360908 MODEL 8912504 protein-coding Kiaa0586 KIAA0586 ortholog INVOLVED IN cilium assembly (ortholog); regulation of establishment of protein localization (ortholog); smoothened signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); photoreceptor inner segment (ortholog) NW_004955466 12125559 12240991 + 102005127 AGCD01051113;AGCD01051114;AGCD01051115;GBDF01053235;XM_005399217;XM_013521975;XM_013521976 XP_005399274;XP_013377429;XP_013377430 MODEL 10140531 protein-coding Tnni2 troponin I2, fast skeletal type ENCODES a protein that exhibits actin binding (ortholog); troponin T binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); relaxation of skeletal muscle (ortholog); skeletal muscle contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Breast Cancer, Familial (ortholog); distal arthrogryposis (ortholog); FOUND IN nucleus (ortholog); troponin complex (ortholog) NW_004955422 13649827 13652342 + 106146249 AGCD01022837;GBDI01010093;XM_005384181 XP_005384238 MODEL 8866976 protein-coding LOC102003791 olfactory receptor 5D18-like NW_004955511 564979 565959 - 102003791 AGCD01066333;XM_005408200 XP_005408257 MODEL 8897145 pseudo LOC102009743 tubulin alpha-3E chain pseudogene NW_004955429 3059738 3060342 - 102009743 AGCD01028454 MODEL 8891740 ncrna LOC102022053 uncharacterized LOC102022053 NW_004955459 2657683 2664979 - 102022053 AGCD01047994;GBDF01086385;XR_263008 MODEL 8981862 pseudo LOC102016001 transcription elongation factor B polypeptide 2 pseudogene NW_004955584 879232 879656 + 102016001 AGCD01075967 MODEL 9061084 protein-coding Xkrx XK related X-linked ASSOCIATED WITH acute myeloid leukemia (ortholog); lung cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955503 7037200 7066070 - 102023378 AGCD01064776;AGCD01064777;AGCD01064778;GBDI01286611;XM_005406943 XP_005407000 MODEL 8961488 ncrna LOC102018759 uncharacterized LOC102018759 NW_004955434 343225 349646 + 102018759 AGCD01032022;AGCD01032023;AGCD01032024;GBDK01384477;XR_261606 MODEL 8909393 protein-coding Tfdp1 transcription factor Dp-1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anoikis (ortholog); epidermis development (ortholog); negative regulation of fat cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); Rb-E2F complex (ortholog) NW_004955404 371905 408441 - 102030377 AGCD01003199;GBDJ01355231;XM_005373938;XM_013515501 XP_005373995;XP_013370955 MODEL 8822272 protein-coding Susd6 sushi domain containing 6 INVOLVED IN DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog) NW_004955466 681701 734797 - 102027626 AGCD01050673;GBCE01099041;XM_013521965;XM_013521966;XM_013521967 XP_013377419;XP_013377420;XP_013377421 MODEL 39132925 snrna U6 U6 spliceosomal RNA 39133630 snrna U4 U4 spliceosomal RNA 39133140 snrna U6 U6 spliceosomal RNA 8858849 pseudo LOC102021348 prefoldin subunit 1 pseudogene NW_004955482 4817894 4819362 - 102021348 AGCD01057311 MODEL 8881196 protein-coding Slc7a6 solute carrier family 7 member 6 ENCODES a protein that exhibits arginine binding (ortholog); basic amino acid transmembrane transporter activity (ortholog); L-arginine transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); glycine betaine transport (ortholog); L-arginine transmembrane transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN plasma membrane (ortholog); transmembrane transporter complex (ortholog) NW_004955484 8335508 8383814 - 102009185 AGCD01058376;AGCD01058377;XM_005403582;XM_013503921;XM_013503922;XM_013503923;XM_013503924;XM_013503925;XM_013503926;XM_013503927;XM_013503928 XP_005403639;XP_013359375;XP_013359376;XP_013359377;XP_013359378;XP_013359379;XP_013359380;XP_013359381;XP_013359382 MODEL 8701340 protein-coding Tspan5 tetraspanin 5 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955405 8725761 8759784 - 102020520 AGCD01004751;GBCQ01094713;GBDF01221548;XM_013517460 XP_013372914 MODEL 9003567 protein-coding Slc22a31 solute carrier family 22 member 31 ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog) NW_004955541 2894053 2897032 - 102028132 AGCD01071430;GBCQ01164308;XM_013507988 XP_013363442 MODEL 8891548 protein-coding Dusp9 dual specificity phosphatase 9 PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); thymoma (ortholog); urinary bladder cancer (ortholog) NW_004955580 388277 392269 + 102013565 AGCD01075602;AGCD01075603;GBCQ01088638;XM_013509676 XP_013365130 MODEL 8961855 protein-coding LOC102009744 lipocalin-1-like NW_004955513 2591903 2597295 + 102009744 AGCD01066882;GBBH01003724;XM_005408420 XP_005408477 MODEL 8963181 protein-coding Sirt2 sirtuin 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); histone acetyltransferase binding (ortholog); INVOLVED IN cellular response to caloric restriction (ortholog); cellular response to epinephrine stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); chromosome (ortholog) NW_004955468 626365 644441 + 102005244 AGCD01051719;GBDF01006521;XM_005399813;XM_005399815;XM_005399816;XM_005399817;XM_005399818;XM_005399819;XM_005399820 XP_005399870;XP_005399872;XP_005399873;XP_005399874;XP_005399875;XP_005399876;XP_005399877 MODEL 9004802 protein-coding Nrbp2 nuclear receptor binding protein 2 INVOLVED IN negative regulation of neuron apoptotic process (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955454 2500360 2507372 - 102014109 AGCD01045022;GBDJ01131870;XM_005395814;XM_013520061 XP_005395871;XP_013375515 MODEL 8806961 ncrna LOC102023108 uncharacterized LOC102023108 NW_004955453 16715278 16718568 + 102023108 AGCD01044910;GBDF01285863;XR_262757 MODEL 8938303 pseudo LOC102017941 L-lactate dehydrogenase A chain pseudogene NW_004955403 58774316 58775377 - 102017941 AGCD01003191;XR_259281 MODEL 8846111 protein-coding Gch1 GTP cyclohydrolase 1 ENCODES a protein that exhibits calcium ion binding (ortholog); GTP binding (ortholog); GTP cyclohydrolase I activity (ortholog); INVOLVED IN dihydrobiopterin metabolic process (ortholog); dopamine biosynthetic process (ortholog); negative regulation of blood pressure (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; Segawa syndrome pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955409 8624225 8670436 + 102029271 AGCD01009423;GBDF01115282;XM_005376759 XP_005376816 MODEL 8733870 pseudo LOC102019148 60S ribosomal protein L26 pseudogene NW_004955409 36742477 36744893 + 102019148 AGCD01010480 MODEL 8768761 protein-coding Exoc5 exocyst complex component 5 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN apoptotic process (ortholog); establishment of planar polarity (ortholog); kidney development (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary base (ortholog); midbody (ortholog) NW_004955466 11115902 11191353 - 102026304 AGCD01051084;AGCD01051085;GBDF01013286;XM_005399204;XM_013521923;XM_013521924 XP_005399261;XP_013377377;XP_013377378 MODEL 8852997 protein-coding Cux1 cut like homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN inner ear auditory receptor cell differentiation (ortholog); kidney development (ortholog); lung development (ortholog); ASSOCIATED WITH apraxia (ortholog); attention deficit hyperactivity disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955456 15292562 15636835 - 102018803 AGCD01046667;AGCD01046668;AGCD01046669;AGCD01046670;AGCD01046671;GBCB01021487;GBDJ01094797;XM_013520550 XP_013376004 MODEL 10270001 ncrna LOC106147319 uncharacterized LOC106147319 NW_004955542 1571190 1574724 - 106147319 AGCD01071505;GBDJ01346676;XR_001232166 MODEL 9010490 protein-coding Smim5 small integral membrane protein 5 NW_004955506 6595977 6607264 - 102014590 AGCD01065432;GBCQ01122299;XM_005407487;XM_013505978;XR_001231589 XP_005407544;XP_013361432 MODEL 8823183 pseudo LOC102005232 keratinocyte-associated protein 2-like NW_004955458 7970440 7970901 - 102005232 AGCD01047597 MODEL 39132760 snrna U6 U6 spliceosomal RNA 8994561 protein-coding LOC102025259 spermatogenesis-associated protein 31E1-like NW_004955422 23945051 23950044 - 102025259 AGCD01023211;GBDF01157943;GBDF01250244;XM_005384977 XP_005385034 MODEL 8784937 pseudo LOC102003470 L-lactate dehydrogenase A chain pseudogene NW_004955505 1011597 1012538 + 102003470 AGCD01064964 MODEL 8731175 protein-coding Bnip3 BCL2 interacting protein 3 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN autophagic cell death (ortholog); brown fat cell differentiation (ortholog); cardiac muscle cell apoptotic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; intrinsic apoptotic pathway; mitochondrial autophagy pathway; ASSOCIATED WITH Chronic Intermittent Hypoxia (ortholog); chronic obstructive pulmonary disease (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955477 9621812 9630406 - 102022813 AGCD01055677;GBCQ01005103;GBDI01001865;XM_005402035 XP_005402092 MODEL 8919443 protein-coding Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 ENCODES a protein that exhibits GTPase binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to nutrient levels (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955414 19228615 19235523 + 102029849 AGCD01015308;GBBH01062278;XM_005380006 XP_005380063 MODEL 8853961 protein-coding Txk TXK tyrosine kinase ENCODES a protein that exhibits protein tyrosine kinase activity (ortholog); INVOLVED IN adaptive immune response (ortholog); NK T cell differentiation (ortholog); positive regulation of cytokine production (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955443 474099 556697 + 102024387 AGCD01038111;AGCD01038112;AGCD01038113;AGCD01038114;AGCD01038115;AGCD01038116;GBDJ01052835;XM_005391880;XM_005391882;XM_005391883;XM_005391884;XR_262172;XR_262173 XP_005391937;XP_005391939;XP_005391940;XP_005391941 MODEL 8967318 protein-coding Gtf3c1 general transcription factor IIIC subunit 1 ENCODES a protein that exhibits RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN transcription initiation at RNA polymerase III promoter (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); ribonucleoprotein complex (ortholog) NW_004955493 5651841 5724426 - 102007782 AGCD01061073;AGCD01061074;AGCD01061075;GBCQ01067197;GBDI01215880;XM_005405141 XP_005405198 MODEL 8850047 protein-coding Scin scinderin INVOLVED IN actin filament capping (ortholog); actin filament severing (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN brush border (ortholog); protein-containing complex (ortholog) NW_004955410 16286131 16358286 + 102016989 AGCD01010956;AGCD01010957;AGCD01010958;GBBH01031222;GBDJ01084886;XM_005377322 XP_005377379 MODEL 8771618 protein-coding Rab18 RAB18, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTPase activity (ortholog); INVOLVED IN endoplasmic reticulum tubular network organization (ortholog); lipid droplet organization (ortholog); sterol homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cis-Golgi network membrane (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955462 1380158 1411804 + 102025662 AGCD01049116;AGCD01049117;GBDF01088111;GBDF01088112;XM_013521463 XP_013376917 MODEL 8911864 protein-coding Tnni3 troponin I3, cardiac type ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); calcium channel inhibitor activity (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); heart contraction (ortholog); heart development (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2L (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cardiac myofibril (ortholog); cardiac Troponin complex (ortholog); contractile muscle fiber (ortholog) NW_004955567 1037325 1042102 + 102004865 AGCD01074455;GBDK01181107;XM_005413355 XP_005413412 MODEL 8934245 ncrna LOC102020247 uncharacterized LOC102020247 NW_004955484 5704110 5713900 + 102020247 AGCD01058267;AGCD01058268;GBDF01205030;XR_263889 MODEL 8991222 protein-coding Suv39h1 SUV39H1 histone lysine methyltransferase ENCODES a protein that exhibits histone H3K14ub reader activity (ortholog); histone H3K9 methyltransferase activity (ortholog); histone H3K9 trimethyltransferase activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); cellular response to glucose starvation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chromosome Breakage (ortholog); Ependymomas (ortholog); FOUND IN chromatin (ortholog); chromatin silencing complex (ortholog); chromosome (ortholog) NW_004955543 258479 271128 + 102023953 AGCD01071569;GBBH01222285;XM_005411276 XP_005411333 MODEL 9028218 protein-coding LOC102012951 olfactory receptor 52N2 NW_004955414 21777014 21940262 - 102012951 AGCD01015432;AGCD01015433;AGCD01015434;AGCD01015435;AGCD01015436;AGCD01015437;AGCD01015438;GBDF01075977;XM_005380109;XM_005380110;XM_005380111;XM_005380112;XM_013511697 XP_005380166;XP_005380167;XP_005380168;XP_005380169;XP_013367151 MODEL 8801313 protein-coding Il1rap interleukin 1 receptor accessory protein ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-1 receptor activity (ortholog); interleukin-1 receptor binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-1-mediated signaling pathway (ortholog); interleukin-33-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); Disease Progression (ortholog); FOUND IN glutamatergic synapse (ortholog); interleukin-1 receptor complex (ortholog); protein-containing complex (ortholog) NW_004955420 17463493 17591054 - 102014674 AGCD01021022;AGCD01021023;AGCD01021024;GBDK01278591;XM_005383222;XM_013513507;XM_013513508;XM_013513509;XM_013513510 XP_005383279;XP_013368961;XP_013368962;XP_013368963;XP_013368964 MODEL 8822606 pseudo LOC102014117 calcium uptake protein 3, mitochondrial pseudogene NW_004955458 1985879 1991150 + 102014117 AGCD01047209 MODEL 8861575 pseudo LOC102012580 SPRY domain-containing protein 4 pseudogene NW_004955538 3531985 3536331 - 102012580 AGCD01071169 MODEL 8989903 protein-coding LOC102007848 olfactory receptor 4D1-like NW_004955451 4849254 4855277 - 102007848 AGCD01043143;AGCD01043144;GBDF01064574;XM_005394585 XP_005394642 MODEL 8799074 ncrna LOC102009360 uncharacterized LOC102009360 NW_004955410 29294602 29317106 + 102009360 AGCD01011281;AGCD01011282;GBCQ01057489;XR_001232714 MODEL 8843167 protein-coding Tcerg1 transcription elongation regulator 1 ENCODES a protein that exhibits identical protein binding (ortholog); proline-rich region binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN mRNA processing (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955415 7597557 7665215 - 102014557 AGCD01016046;AGCD01016047;AGCD01016048;GBDF01085501;XM_005380669;XM_005380670;XM_005380671;XM_005380672;XM_005380673 XP_005380726;XP_005380727;XP_005380728;XP_005380729;XP_005380730 MODEL 8745055 protein-coding Fhl5 four and a half LIM domains 5 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH migraine (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955411 22583314 22619281 + 102018370 AGCD01012095;GBDF01008124;XM_005377785;XM_005377787;XM_013510707 XP_005377842;XP_005377844;XP_013366161 MODEL 8725372 protein-coding Samd10 sterile alpha motif domain containing 10 ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog) NW_004955528 279481 284386 + 102010090 AGCD01069523;AGCD01069524;GBCE01142429;GBDK01284591;XM_013507483 XP_013362937 MODEL 8790126 protein-coding Lin37 lin-37 DREAM MuvB core complex component ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN G0 to G1 transition (ortholog); gene expression (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955468 2799641 2803880 - 102021431 AGCD01051838;GBBH01119468;XM_005399965;XM_005399966;XM_005399968;XM_013522390;XM_013522391;XM_013522392 XP_005400022;XP_005400023;XP_005400025;XP_013377844;XP_013377845;XP_013377846 MODEL 8832926 protein-coding LOC102010535 protein FAM47A-like NW_004955587 258217 259881 - 102010535 AGCD01076061;GBDF01017135;XM_005414446 XP_005414503 MODEL 9031553 protein-coding Tafazzin tafazzin, phospholipid-lysophospholipid transacylase ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); INVOLVED IN cardiolipin acyl-chain remodeling (ortholog); cardiolipin metabolic process (ortholog); cristae formation (ortholog); PARTICIPATES IN cardiolipin metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); Barth syndrome (ortholog); cardiomyopathy (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955580 915668 921703 + 102029680 AGCD01075630;GBCQ01125460;XM_005414194;XR_001232478 XP_005414251 MODEL 9012290 protein-coding Gle1 GLE1 RNA export mediator ENCODES a protein that exhibits identical protein binding (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); cervical cancer (ortholog); Congenital Arthrogryposis with Anterior Horn Cell Disease (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955570 970267 1004525 + 102029913 AGCD01074778;AGCD01074779;AGCD01074780;AGCD01074781;GBDF01046533;XM_005413557;XM_005413558 XP_005413614;XP_005413615 MODEL 8878040 protein-coding Tfdp2 transcription factor Dp-2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN heart development (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955508 3722412 3844340 + 102015031 AGCD01065832;AGCD01065833;AGCD01065834;AGCD01065835;AGCD01065836;AGCD01065837;AGCD01065838;AGCD01065839;GBBH01207991;XM_005407749;XM_005407752;XM_013506253;XM_013506254;XM_013506255;XM_013506256;XM_013506257 XP_005407806;XP_005407809;XP_013361707;XP_013361708;XP_013361709;XP_013361710;XP_013361711 MODEL 8893515 pseudo LOC102004538 nuclease-sensitive element-binding protein 1 pseudogene NW_004955591 118340 236564 + 102004538 AGCD01076245;AGCD01076246;AGCD01076247;AGCD01076248;AGCD01076249;AGCD01076250 MODEL 8791067 protein-coding Slc7a6os solute carrier family 7 member 6 opposite strand INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Progressive Myoclonus Epilepsy 12 (ortholog) NW_004955484 8340059 8348776 + 102009505 AGCD01058376;GBDF01221281;XM_005403583 XP_005403640 MODEL 39132761 snrna U6 U6 spliceosomal RNA 8837689 protein-coding Xpa XPA, DNA damage recognition and repair factor ENCODES a protein that exhibits damaged DNA binding (ortholog); protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN DNA repair (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); multicellular organism growth (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); DNA replication factor A complex (ortholog); nuclear body (ortholog) NW_004955419 27751042 27774917 + 102023038 AGCD01020448;GBDJ01229564;XM_005382841;XR_260670 XP_005382898 MODEL 8797232 protein-coding Lrrd1 leucine rich repeats and death domain containing 1 NW_004955432 9132229 9166690 - 102027442 AGCD01030894;AGCD01030895;AGCD01030896;AGCD01030897;AGCD01030898;GBDF01082957;XM_013515909;XM_013515910 XP_013371363;XP_013371364 MODEL 9055830 pseudo LOC102019150 ribosome biogenesis protein BRX1 homolog pseudogene NW_004955411 12654807 12655867 + 102019150 AGCD01011851 MODEL 39133631 snrna U4 U4 spliceosomal RNA 8838828 pseudo LOC102003793 R-spondin-3 pseudogene NW_004955514 156613 206653 - 102003793 AGCD01066997;AGCD01066998;AGCD01066999;AGCD01067000;AGCD01067001 MODEL 8810943 protein-coding Gchfr GTP cyclohydrolase I feedback regulator ENCODES a protein that exhibits amino acid binding (ortholog); enzyme inhibitor activity (ortholog); GTP cyclohydrolase binding (ortholog); INVOLVED IN protein-containing complex assembly (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; Segawa syndrome pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); intracellular protein-containing complex (ortholog) NW_004955416 7617333 7620455 + 102026106 AGCD01016995;GBDK01091172;XM_005381258 XP_005381315 MODEL 8729417 protein-coding Kiaa0753 KIAA0753 ortholog INVOLVED IN cilium assembly (ortholog); cytosolic ciliogenesis (ortholog); protein localization to centrosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog) NW_004955467 12074413 12144672 - 102006760 AGCD01051625;GBDJ01018170;XM_013522135;XM_013522136;XM_013522137;XM_013522138;XM_013522140 XP_013377589;XP_013377590;XP_013377591;XP_013377592;XP_013377594 MODEL 9049067 protein-coding Smim7 small integral membrane protein 7 ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955773 11432 22562 - 102008368 AGCD01078319;GBCB01023831;XM_005415106 XP_005415163 MODEL 39132257 snrna U6 U6 spliceosomal RNA 8807722 protein-coding Tcerg1l transcription elongation regulator 1 like ASSOCIATED WITH cervical cancer (ortholog); Colorectal Neoplasms (ortholog); stomach cancer (ortholog) NW_004955477 8652282 8850439 - 102021121 AGCD01055648;AGCD01055649;AGCD01055650;AGCD01055651;GBCB01036009;XM_005402032 XP_005402089 MODEL 8971799 pseudo LOC102016011 microfibrillar-associated protein 1 pseudogene NW_004955662 2333 3692 - 102016011 AGCD01077893 MODEL 8889132 protein-coding Tspan6 tetraspanin 6 INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of cytoplasmic pattern recognition receptor signaling pathway (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog) NW_004955503 6782264 6788533 - 102020466 AGCD01064769;AGCD01064770;GBBH01229992;XM_005406932 XP_005406989 MODEL 8785512 protein-coding Bnip3l BCL2 interacting protein 3 like ENCODES a protein that exhibits identical protein binding (ortholog); lamin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); defense response to virus (ortholog); mitochondrial protein catabolic process (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; mitochondrial autophagy pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Cerebral Hemorrhage (ortholog); Chronic Cerebral Hypoperfusion (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955403 49122408 49144162 + 102027479 AGCD01002935;GBDF01047886;XM_005373726 XP_005373783 MODEL 8888627 ncrna LOC102009749 uncharacterized LOC102009749 NW_004955519 2189856 2320813 - 102009749 AGCD01067917;AGCD01067918;AGCD01067919;AGCD01067920;AGCD01067921;AGCD01067922;AGCD01067923;AGCD01067924;GBDK01382059;XR_001231859;XR_001231860;XR_001231861 MODEL 8786056 protein-coding Sclt1 sodium channel and clathrin linker 1 ENCODES a protein that exhibits clathrin binding (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN cilium assembly (ortholog); clustering of voltage-gated sodium channels (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); astigmatism (ortholog); autosomal recessive polycystic kidney disease (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955428 12583203 12753577 + 102027432 AGCD01027931;AGCD01027932;AGCD01027933;GBDF01159365;XM_005386718;XM_013515272;XM_013515273;XM_013515274 XP_005386775;XP_013370726;XP_013370727;XP_013370728 MODEL 8781001 protein-coding Rab19 RAB19, member RAS oncogene family ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955494 2878562 2885766 - 102021776 AGCD01061452;AGCD01061453;AGCD01061454;GBCQ01072981;XM_005405422 XP_005405479 MODEL 9040519 protein-coding LOC102020250 cocaine esterase-like NW_004955484 9650749 9665513 - 102020250 AGCD01058424;GBCQ01000107;XM_005403714;XM_013504010;XM_013504011;XM_013504012;XM_013504013;XM_013504014;XM_013504015 XP_005403771;XP_013359464;XP_013359465;XP_013359466;XP_013359467;XP_013359468;XP_013359469 MODEL 8997239 protein-coding Suv39h2 SUV39H2 histone lysine methyltransferase ENCODES a protein that exhibits chromatin binding (ortholog); histone H3 methyltransferase activity (ortholog); histone H3K14ub reader activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); chromatin organization (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Parakeratosis (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); heterochromatin (ortholog) NW_004955429 19503197 19526454 - 102007577 AGCD01028963;GBCE01165428;GBDF01082638;XM_013515371 XP_013370825 MODEL 39131375 protein-coding DMP1 dentin matrix acidic phosphoprotein 1 8972605 ncrna LOC102017945 uncharacterized LOC102017945 NW_004955405 7621676 7626930 + 102017945 AGCD01004721;GBDF01304497;XR_001236107;XR_259363 MODEL 9053416 ncrna LOC102007849 uncharacterized LOC102007849 NW_004955452 2488589 2501328 + 102007849 AGCD01043896;GBDJ01336024;XR_001236017 MODEL 8988265 protein-coding Nrcam neuronal cell adhesion molecule ENCODES a protein that exhibits ankyrin binding (ortholog); protein binding involved in heterotypic cell-cell adhesion (ortholog); INVOLVED IN angiogenesis (ortholog); axon guidance (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); cilium (ortholog) NW_004955410 12437248 12518083 - 102008923 AGCD01010858;AGCD01010859;GBDF01057730;XM_005377294;XM_005377295;XM_005377296;XM_013510541;XM_013510542;XM_013510543;XM_013510544;XM_013510545;XM_013510546;XM_013510547;XM_013510548;XM_013510549;XM_013510550;XM_013510551;XM_013510552;XM_013510553;XM_013510554;XM_013510555;XM_013510557;XM_013510558;XM_013510559;XM_013510560;XM_013510561;XM_013510562;XM_013510563 XP_005377351;XP_005377352;XP_005377353;XP_013365995;XP_013365996;XP_013365997;XP_013365998;XP_013365999;XP_013366000;XP_013366001;XP_013366002;XP_013366003;XP_013366004;XP_013366005;XP_013366006;XP_013366007;XP_013366008;XP_013366009;XP_013366011;XP_013366012;XP_013366013;XP_013366014;XP_013366015;XP_013366016;XP_013366017 MODEL 8775130 protein-coding LOC102012581 uncharacterized LOC102012581 NW_004955437 3361650 3366877 + 102012581 AGCD01034309;GBDF01223138;XM_013516728 XP_013372182 MODEL 9012459 protein-coding Bnip5 BCL2 interacting protein 5 ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal cancer (ortholog); prostate cancer (ortholog) NW_004955437 4049113 4067150 - 102009216 AGCD01034359;GBCQ01139589;XM_005389589;XM_005389590;XM_005389591 XP_005389646;XP_005389647;XP_005389648 MODEL 8999372 ncrna LOC102005233 uncharacterized LOC102005233 NW_004955460 10800696 10803686 + 102005233 AGCD01048610;XR_001236511;XR_263052 MODEL 8963881 protein-coding Cux2 cut like homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cognition (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955482 7783483 8045808 + 102005380 AGCD01057490;AGCD01057491;AGCD01057492;AGCD01057493;AGCD01057494;AGCD01057495;AGCD01057496;AGCD01057497;AGCD01057498;AGCD01057499;GBDF01087934;GBDF01087936;XM_013503646 XP_013359100 MODEL 8835382 ncrna LOC102010538 uncharacterized LOC102010538 NW_004955403 1911461 1914126 - 102010538 AGCD01001726;GBDF01042347;XR_259133 MODEL 8738402 protein-coding Samd11 sterile alpha motif domain containing 11 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); PH domain binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); retinal rod cell development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN nucleus (ortholog); PRC1 complex (ortholog) NW_004955486 9763704 9781132 - 102007238 AGCD01059198;AGCD01059199;GBDI01105768;XM_005404271 XP_005404328 MODEL 8857761 protein-coding Txlna taxilin alpha INVOLVED IN B cell activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); lymphoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955452 10548858 10565996 + 102016125 AGCD01044280;GBBH01062319;XM_005395044;XM_005395045;XM_005395046;XM_005395048 XP_005395101;XP_005395102;XP_005395103;XP_005395105 MODEL 8797631 protein-coding Dut deoxyuridine triphosphatase ENCODES a protein that exhibits dUTP diphosphatase activity (ortholog); identical protein binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); INVOLVED IN dTMP biosynthetic process (ortholog); dUMP biosynthetic process (ortholog); dUTP catabolic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; mitochondrial neurogastrointestinal encephalopathy syndrome pathway; ASSOCIATED WITH Bone Marrow Failure and Diabetes Mellitus Syndrome (ortholog); Brain Neoplasms (ortholog); High Myopia (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955409 5574810 5584135 - 102012506 AGCD01009319;AGCD01009320;GBDF01000559;XM_005376703;XM_005376704;XM_013510306 XP_005376760;XP_005376761;XP_013365760 MODEL 8973677 protein-coding Gtf3c2 general transcription factor IIIC subunit 2 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN transcription by RNA polymerase III (ortholog); transcription initiation at RNA polymerase III promoter (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription factor TFIIIC complex (ortholog) NW_004955469 9295189 9324171 - 102027061 AGCD01052498;GBCE01134567;XM_005400480 XP_005400537 MODEL 8763331 protein-coding Sirt3 sirtuin 3 ENCODES a protein that exhibits enzyme binding (ortholog); histone H3K14 deacetylase activity, NAD-dependent (ortholog); NAD-dependent protein lysine deacetylase activity (ortholog); INVOLVED IN aerobic respiration (ortholog); mitochondrial fusion (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); mitochondrial inner membrane (ortholog) NW_004955476 11794951 11826244 + 102028186 AGCD01055474;AGCD01055475;GBBH01140166;XM_005401880;XM_005401881;XM_005401882;XM_005401884;XM_005401885;XM_013502916 XP_005401937;XP_005401938;XP_005401939;XP_005401941;XP_005401942;XP_013358370 MODEL 9067309 protein-coding Tnnt1 troponin T1, slow skeletal type ENCODES a protein that exhibits tropomyosin binding (ortholog); troponin T binding (ortholog); INVOLVED IN negative regulation of muscle contraction (ortholog); skeletal muscle contraction (ortholog); slow-twitch skeletal muscle fiber contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); dilated cardiomyopathy (ortholog); FOUND IN troponin complex (ortholog) NW_004955567 1039625 1050581 + 102004337 AGCD01074455;AGCD01074456;XM_005413353;XM_005413354;XM_013509279;XM_013509280 XP_005413410;XP_005413411;XP_013364733;XP_013364734 MODEL 39132762 snrna U6 U6 spliceosomal RNA 39131297 protein-coding IL1RAPL1 interleukin 1 receptor accessory protein like 1 9031681 protein-coding Slc7a7 solute carrier family 7 member 7 ENCODES a protein that exhibits basic amino acid transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); L-arginine transmembrane transport (ortholog); L-leucine transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amino acid metabolic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN basolateral plasma membrane (ortholog); transmembrane transporter complex (ortholog) NW_004955409 37467151 37513533 + 102005677 AGCD01010521;AGCD01010522;AGCD01010523;GBBH01229030;XM_005377122;XM_005377123;XM_005377124;XM_005377126;XM_005377127;XM_013510452 XP_005377179;XP_005377180;XP_005377181;XP_005377183;XP_005377184;XP_013365906 MODEL 39132927 snrna U6 U6 spliceosomal RNA 8952206 protein-coding LOC102014118 serine protease 40-like NW_004955459 210829 216046 - 102014118 AGCD01047928;GBDF01008590;XM_005397546 XP_005397603 MODEL 39133142 snrna U6 U6 spliceosomal RNA 8873709 protein-coding Txlnb taxilin beta ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); ovarian cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955436 20442605 20481758 + 102012471 AGCD01034024;GBCB01005309;XM_005389259 XP_005389316 MODEL 8935443 protein-coding Xpc XPC complex subunit, DNA damage recognition and repair factor ENCODES a protein that exhibits damaged DNA binding (ortholog); DNA damage sensor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); mitotic intra-S DNA damage checkpoint signaling (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); amino acid metabolic disorder (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) NW_004955429 16935901 16968285 - 102023284 AGCD01028842;AGCD01028843;GBBH01000085;GBCQ01035510;XM_005387261 XP_005387318 MODEL 8978886 protein-coding LOC102025261 olfactory receptor 7C1-like NW_004955495 785679 795701 - 102025261 AGCD01061653;XM_013505047 XP_013360501 MODEL 8749257 pseudo LOC102020251 arylacetamide deacetylase-like 4 NW_004955486 740749 753796 - 102020251 AGCD01058878;AGCD01058879;AGCD01058880;AGCD01058881;AGCD01058882 MODEL 8740620 protein-coding Lin52 lin-52 DREAM MuvB core complex component ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955523 1250551 1344434 - 102022007 AGCD01068512;AGCD01068513;AGCD01068514;GBCB01055923;XM_005409403;XM_005409404;XM_005409405 XP_005409460;XP_005409461;XP_005409462 MODEL 39133632 snrna U4 U4 spliceosomal RNA 8720045 protein-coding Slc22a4 solute carrier family 22 member 4 ENCODES a protein that exhibits acetylcholine transmembrane transporter activity (ortholog); amino acid transmembrane transporter activity (ortholog); amino-acid betaine transmembrane transporter activity (ortholog); INVOLVED IN acetylcholine uptake (ortholog); amino acid import across plasma membrane (ortholog); carnitine metabolic process (ortholog); PARTICIPATES IN cisplatin response pathway; ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); clear cell renal cell carcinoma (ortholog); Coxsackievirus Infections (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); mitochondrial membrane (ortholog) NW_004955408 3671772 3737946 + 102014984 AGCD01008071;AGCD01008072;AGCD01008073;GBDI01289956;XM_013508300 XP_013363754 MODEL 8961815 protein-coding Tagap T cell activation RhoGTPase activating protein INVOLVED IN defense response to virus (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Crohn's disease (ortholog); lymphoma (ortholog) NW_004955439 3479041 3488403 + 102009422 AGCD01035678;GBCB01086817;XM_005390512 XP_005390569 MODEL 8839415 protein-coding Glg1 golgi glycoprotein 1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); negative regulation of protein processing (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN extracellular matrix (ortholog); Golgi apparatus (ortholog); Golgi medial cisterna (ortholog) NW_004955484 2871390 2987913 + 102026426 AGCD01058144;AGCD01058145;AGCD01058146;AGCD01058147;AGCD01058148;GBDJ01011078;XM_005403463 XP_005403520 MODEL 8938032 ncrna LOC102003796 uncharacterized LOC102003796 NW_004955433 12458790 12516903 - 102003796 AGCD01031664;GBBH01126520;XR_001234747;XR_001234748;XR_001234749;XR_001234750;XR_001234751;XR_001234752;XR_261587 MODEL 8785200 protein-coding LOC102018763 uncharacterized LOC102018763 NW_004955527 8085 9252 + 102018763 AGCD01069371;GBDF01002839;XM_013507372 XP_013362826 MODEL 8814808 protein-coding Smim9 small integral membrane protein 9 NW_004955594 803406 816735 + 102029923 AGCD01076442;AGCD01076443;GBDK01096360;XM_005414667 XP_005414724 MODEL 9044765 protein-coding Gck glucokinase ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); D-glucose binding (ortholog); INVOLVED IN calcium ion import (ortholog); carbohydrate phosphorylation (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; forkhead class A signaling pathway; galactokinase deficiency pathway; ASSOCIATED WITH Abdominal Pain (ortholog); absence epilepsy (ortholog); anxiety disorder (ortholog); FOUND IN actin filament (ortholog); basal cortex (ortholog); cell cortex (ortholog) NW_004955456 7784269 7838260 + 102021313 AGCD01046432;AGCD01046433;AGCD01046434;AGCD01046435;GBDI01283119;XM_013520657 XP_013376111 MODEL 8911095 protein-coding Tfe3 transcription factor binding to IGHM enhancer 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN humoral immune response (ortholog); lysosome organization (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lysosomal membrane (ortholog) NW_004955543 547037 561073 - 102004521 AGCD01071591;GBDK01017184;XM_005411307;XM_005411309;XM_005411310 XP_005411364;XP_005411366;XP_005411367 MODEL 8861185 protein-coding LOC102023109 cytochrome c1, heme protein, mitochondrial INVOLVED IN response to glucagon (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); anxiety disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955454 2758935 2760569 + 102023109 AGCD01045033;GBCQ01008022;GBDF01045160;XM_013520268 XP_013375722 MODEL 8983906 protein-coding LOC102010539 T-complex protein 1 subunit alpha-like NW_004957703 193 1109 - 102010539 AGCD01081099;GBCC01015007;GBDI01244130;XM_005415234 XP_005415291 MODEL 8933081 protein-coding Exoc6 exocyst complex component 6 INVOLVED IN erythrocyte differentiation (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955425 389940 560683 - 102005729 AGCD01025182;AGCD01025183;AGCD01025184;AGCD01025185;AGCD01025186;GBDF01195546;GBDK01316958;XM_013514880 XP_013370334 MODEL 10209726 ncrna LOC106147320 uncharacterized LOC106147320 NW_004955542 1525388 1525997 - 106147320 AGCD01071505;XR_001232167 MODEL 9014295 protein-coding LOC102009370 protein FAM69A NW_004955469 9920282 9922602 + 102009370 AGCD01052521;GBCB01040907;GBDJ01083890;XM_005400517 XP_005400574 MODEL 8834951 protein-coding LOC102021350 histone H3 NW_004955483 969514 970652 - 102021350 AGCD01057638;GBDF01240962;XM_013503791 XP_013359245 MODEL 39132763 snrna U6 U6 spliceosomal RNA 8858834 protein-coding LOC102019158 glyceraldehyde-3-phosphate dehydrogenase-like NW_004955413 9642246 9643405 - 102019158 AGCD01013908;XM_013511580 XP_013367034 MODEL 9050829 protein-coding Lrrfip1 LRR binding FLII interacting protein 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955542 2632933 2737922 - 102003380 AGCD01071530;AGCD01071531;AGCD01071532;AGCD01071533;GBBH01034483;XM_005411206;XM_005411212;XM_005411213;XM_013508023;XM_013508025;XM_013508026;XM_013508027;XM_013508028;XM_013508029;XM_013508030;XM_013508031;XM_013508032;XM_013508033;XM_013508034;XM_013508036;XM_013508037;XM_013508038;XM_013508039;XM_013508040;XM_013508041;XM_013508042;XM_013508043;XM_013508044;XM_013508045;XM_013508046;XM_013508047;XM_013508048;XM_013508049;XM_013508050;XM_013508051;XM_013508052;XM_013508053;XM_013508054;XM_013508055 XP_005411263;XP_005411269;XP_005411270;XP_013363477;XP_013363479;XP_013363480;XP_013363481;XP_013363482;XP_013363483;XP_013363484;XP_013363485;XP_013363486;XP_013363487;XP_013363488;XP_013363490;XP_013363491;XP_013363492;XP_013363493;XP_013363494;XP_013363495;XP_013363496;XP_013363497;XP_013363498;XP_013363499;XP_013363500;XP_013363501;XP_013363502;XP_013363503;XP_013363504;XP_013363505;XP_013363506;XP_013363507;XP_013363508;XP_013363509 MODEL 8897956 pseudo LOC102007851 cyclin-G1 pseudogene NW_004955404 47890555 47891422 - 102007851 AGCD01004488 MODEL 8928672 protein-coding Tnnt2 troponin T2, cardiac type ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); microfilament motor activity (ortholog); INVOLVED IN actin crosslink formation (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); cardiac muscle contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Ataxia (ortholog); autosomal recessive congenital ichthyosis 1 (ortholog); FOUND IN cardiac myofibril (ortholog); cardiac Troponin complex (ortholog); cytoplasm (ortholog) NW_004955406 37491462 37507360 - 102012924 AGCD01006576;GBDJ01136129;XM_005375170;XM_005375171;XM_005375172;XM_005375175;XM_005375176;XM_005375177;XM_005375179;XM_005375180;XM_013522177;XM_013522187;XM_013522212 XP_005375227;XP_005375228;XP_005375229;XP_005375232;XP_005375233;XP_005375234;XP_005375236;XP_005375237;XP_013377631;XP_013377641;XP_013377666 MODEL 8874336 ncrna LOC102003471 uncharacterized LOC102003471 NW_004955428 13113557 13178517 - 102003471 AGCD01027942;AGCD01027943;AGCD01027944;GBDI01311971;XR_001234449;XR_001234450;XR_261299 MODEL 9018174 protein-coding Lamtor2 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to nutrient levels (ortholog); fibroblast migration (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Immunodeficiency due to Defect in MAPBP-Interacting Protein (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); late endosome membrane (ortholog) NW_004955545 2237506 2242070 + 102018226 AGCD01071891;GBCE01030998;XM_005411645 XP_005411702 MODEL 8873755 protein-coding Kiaa0825 KIAA0825 ortholog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog) NW_004955418 17818641 18203402 + 102017877 AGCD01019158;AGCD01019159;AGCD01019160;AGCD01019161;AGCD01019162;AGCD01019163;AGCD01019164;AGCD01019165;GBBH01015832;XM_005382250;XM_005382253;XM_005382254;XM_005382255;XM_005382256;XM_005382257;XM_005382258;XM_013512985 XP_005382307;XP_005382310;XP_005382311;XP_005382312;XP_005382313;XP_005382314;XP_005382315;XP_013368439 MODEL 39132258 snrna U6 U6 spliceosomal RNA 8717872 protein-coding LOC102012953 olfactory receptor 491-like NW_004955414 23663348 23664286 - 102012953 AGCD01015514;XM_013511761 XP_013367215 MODEL 8779027 protein-coding LOC102004541 aldehyde oxidase 4 NW_004955403 694922 799923 - 102004541 AGCD01001705;AGCD01001706;AGCD01001707;AGCD01001708;GBBH01002989;XM_005373240;XM_005373242;XM_013511853;XM_013511857 XP_005373297;XP_005373299;XP_013367307;XP_013367311 MODEL 8782951 ncrna LOC102016013 uncharacterized LOC102016013 NW_004955405 34954226 34974683 + 102016013 AGCD01005388;AGCD01005389;GBDF01253664;XR_259432 MODEL 8704332 pseudo LOC102009750 H-2 class II histocompatibility antigen, E-S beta chain pseudogene NW_004955433 10616032 10617329 + 102009750 AGCD01031633 MODEL 8732879 protein-coding Tspan7 tetraspanin 7 INVOLVED IN axonogenesis (ortholog); regulation of postsynaptic neurotransmitter receptor internalization (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); cervical cancer (ortholog); Dwarfism (ortholog); FOUND IN postsynapse (ortholog) NW_004955566 75576 203512 + 102007825 AGCD01074344;GBBH01119190;XM_005413275 XP_005413332 MODEL 8836577 protein-coding Scly selenocysteine lyase ENCODES a protein that exhibits amino acid binding (ortholog); protein homodimerization activity (ortholog); selenocysteine lyase activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); negative regulation of cellular response to oxidative stress (ortholog); response to insulin (ortholog); PARTICIPATES IN selenoamino acid metabolic pathway; FOUND IN catalytic complex (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955542 2453826 2472951 - 102027902 AGCD01071522;AGCD01071523;GBBH01065161;XM_005411197;XM_013508017 XP_005411254;XP_013363471 MODEL 9061361 protein-coding Fhod1 formin homology 2 domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN establishment of centrosome localization (ortholog); nuclear migration (ortholog); positive regulation of stress fiber assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); intercalated disc (ortholog); nucleus (ortholog) NW_004955484 9380202 9396400 + 102007435 AGCD01058415;GBDK01073619;XM_005403665;XM_005403666 XP_005403722;XP_005403723 MODEL 8743414 protein-coding Rab1a RAB1A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cell migration (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); dilated cardiomyopathy (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) NW_004955424 19393589 19421373 + 102004180 AGCD01024821;AGCD01024822;AGCD01024823;AGCD01024824;AGCD01024825;GBDF01051813;XM_005385692 XP_005385749 MODEL 10341818 protein-coding Smkr1 small lysine rich protein 1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955479 10288231 10288701 + 106146451 AGCD01056534;GBDF01008125;GBDI01069663;XM_013503303 XP_013358757 MODEL 39132767 snrna U6 U6 spliceosomal RNA 8804555 protein-coding LOC102022056 olfactory receptor 49 NW_004955409 37608279 37609402 - 102022056 AGCD01010531;XM_005377185 XP_005377242 MODEL 8789422 pseudo LOC102017946 cytochrome c oxidase subunit 7B, mitochondrial pseudogene NW_004955452 16315978 16316312 + 102017946 AGCD01044505 MODEL 39133014 snrna U6 U6 spliceosomal RNA 8843157 protein-coding Dmp1 dentin matrix acidic phosphoprotein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); extracellular matrix binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); regulation of enamel mineralization (ortholog); ASSOCIATED WITH autosomal recessive hypophosphatemic rickets (ortholog); Hypophosphatemic Rickets, Autosomal Recessive, 1 (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); non-collagenous component of interstitial matrix (ortholog) NW_004955474 2188090 2200284 - 102014350 AGCD01054281;AGCD01054282;GBCE01002429;JN414501;XM_005401334 AEP17666;XP_005401391 MODEL 8782665 pseudo LOC102005234 tRNA pseudouridine(38/39) synthase pseudogene NW_004955409 17845827 17846565 - 102005234 AGCD01009800 MODEL 8864018 protein-coding LOC102012583 putative alpha-1-antitrypsin-related protein NW_004955438 14225509 14229594 + 102012583 AGCD01035332;XM_005390440 XP_005390497 MODEL 9053215 protein-coding Nrdc nardilysin convertase ENCODES a protein that exhibits endopeptidase activator activity (ortholog); peptidase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); positive regulation of axonogenesis (ortholog); positive regulation of membrane protein ectodomain proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955464 7222948 7298234 + 102024101 AGCD01050055;AGCD01050056;AGCD01050057;GBDF01007160;XM_005398598;XM_005398599 XP_005398655;XP_005398656 MODEL 9016356 protein-coding LOC102025265 melanoma-associated antigen 10-like NW_004955498 4274086 4299079 - 102025265 AGCD01062986;AGCD01062987;AGCD01062988;AGCD01062989;AGCD01062990;AGCD01062991;AGCD01062992;GBDF01077002;XM_013505527 XP_013360981 MODEL 8845168 protein-coding Tcf12 transcription factor 12 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); cAMP response element binding (ortholog); DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of gene expression (ortholog); positive regulation of neuron differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955450 16979990 17375264 - 102021505 AGCD01042860;AGCD01042861;AGCD01042862;AGCD01042863;AGCD01042864;AGCD01042865;AGCD01042866;AGCD01042867;AGCD01042868;GBBH01209044;GBDI01188039;XM_005393856;XM_013518905 XP_005393913;XP_013374359 MODEL 8994755 protein-coding Samd12 sterile alpha motif domain containing 12 ASSOCIATED WITH colon adenocarcinoma (ortholog); familial adult myoclonic epilepsy 1 (ortholog); genetic disease (ortholog) NW_004955417 24137340 24541572 - 102003765 AGCD01018453;AGCD01018454;AGCD01018455;AGCD01018456;AGCD01018457;AGCD01018458;AGCD01018459;AGCD01018460;AGCD01018461;AGCD01018462;AGCD01018463;GBDJ01028414;XM_005381901;XM_005381902;XM_005381903;XM_005381904;XM_013512785;XM_013512787;XM_013512788 XP_005381958;XP_005381959;XP_005381960;XP_005381961;XP_013368239;XP_013368241;XP_013368242 MODEL 8860198 pseudo LOC102012954 SAP domain-containing ribonucleoprotein pseudogene NW_004955472 1335239 1335980 - 102012954 AGCD01053386 MODEL 8886605 ncrna LOC102018765 uncharacterized LOC102018765 NW_004955533 928041 929816 - 102018765 AGCD01070335;GBCB01020311;XR_264741 MODEL 8805423 protein-coding Tagln transgelin INVOLVED IN cellular response to platelet-derived growth factor stimulus (ortholog); cytoskeleton organization (ortholog); epithelial cell differentiation (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); aortic dissection (ortholog); Carotid Artery Injuries (ortholog) NW_004955412 18523469 18529285 + 102025667 AGCD01012944;GBCE01122330;XM_005378201;XM_005378202 XP_005378258;XP_005378259 MODEL 8950005 pseudo LOC102010540 Golgi apparatus membrane protein TVP23 homolog B pseudogene NW_004955403 54262808 54264290 + 102010540 AGCD01003090 MODEL 8848541 protein-coding Slc7a8 solute carrier family 7 member 8 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); antiporter activity (ortholog); glycine transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); amino acid transport (ortholog); glycine transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH cataract (ortholog); colorectal cancer (ortholog); Dwarfism (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955409 37119189 37171300 + 102023671 AGCD01010497;AGCD01010498;GBDJ01075034;XM_013510441;XM_013510442;XM_013510443 XP_013365895;XP_013365896;XP_013365897 MODEL 10378150 ncrna LOC106147321 uncharacterized LOC106147321 NW_004955542 2085018 2106649 - 106147321 AGCD01071511;XR_001232168 MODEL 8974797 pseudo LOC102014125 bleomycin hydrolase pseudogene NW_004955467 12359001 12362302 + 102014125 AGCD01051631 MODEL 8926409 protein-coding Bnipl BCL2 interacting protein like ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); negative regulation of cell population proliferation (ortholog); regulation of growth rate (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955588 409509 417825 + 102021295 AGCD01076109;GBCC01012774;XM_005414480;XM_005414481;XM_005414482;XR_001232525 XP_005414537;XP_005414538;XP_005414539 MODEL 8938063 protein-coding Txlng taxilin gamma ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); INVOLVED IN regulation of bone mineralization (ortholog); regulation of cell cycle (ortholog); regulation of cell cycle process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); high grade glioma (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog); nuclear membrane (ortholog) NW_004955519 1484782 1536278 - 102007266 AGCD01067894;AGCD01067895;AGCD01067896;AGCD01067897;GBDK01432088;XM_005409145;XM_005409146;XM_013506995 XP_005409202;XP_005409203;XP_013362449 MODEL 8937771 protein-coding Cuzd1 CUB and zona pellucida like domains 1 INVOLVED IN hormone-mediated signaling pathway (ortholog); trypsinogen activation (ortholog); FOUND IN membrane (ortholog); zymogen granule (ortholog); zymogen granule membrane (ortholog) NW_004955477 1055245 1067702 - 102023588 AGCD01055502;GBDF01014874;XM_005401950 XP_005402007 MODEL 9043291 protein-coding Xpnpep1 X-prolyl aminopeptidase 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); manganese ion binding (ortholog); metalloaminopeptidase activity (ortholog); INVOLVED IN bradykinin catabolic process (ortholog); negative regulation of programmed cell death (ortholog); proteolysis (ortholog); PARTICIPATES IN kallikrein-kinin cascade pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955485 1436834 1501408 + 102019066 AGCD01058479;AGCD01058480;AGCD01058481;AGCD01058482;GBDI01236003;XM_005403764;XM_005403767;XM_005403768;XM_013504117;XM_013504118;XM_013504119;XM_013504120 XP_005403821;XP_005403824;XP_005403825;XP_013359571;XP_013359572;XP_013359573;XP_013359574 MODEL 39133633 snrna U4 U4 spliceosomal RNA 39133015 snrna U6 U6 spliceosomal RNA 8753395 protein-coding LOC102007853 uncharacterized LOC102007853 NW_004955406 41658569 41676699 + 102007853 AGCD01006688;GBDK01152399;XM_005375483 XP_005375540 MODEL 8820864 protein-coding LOC102003475 olfactory receptor 5D18-like NW_004955511 551616 552566 - 102003475 AGCD01066333;XM_005408199 XP_005408256 MODEL 9025630 protein-coding Slc22a6 solute carrier family 22 member 6 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); antiporter activity (ortholog); prostaglandin transmembrane transporter activity (ortholog); INVOLVED IN alpha-ketoglutarate transport (ortholog); metanephric proximal tubule development (ortholog); monoatomic anion transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH calcinosis (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) NW_004955599 302026 307503 + 102003713 AGCD01076637;GBCQ01008752;XM_005414753;XM_013510035 XP_005414810;XP_013365489 MODEL 39132259 snrna U6 U6 spliceosomal RNA 8996269 pseudo LOC102003803 calmodulin-like NW_004955437 19660488 19661153 + 102003803 AGCD01034865 MODEL 8851393 protein-coding Lrrfip2 LRR binding FLII interacting protein 2 ENCODES a protein that exhibits LRR domain binding (ortholog); INVOLVED IN MyD88-dependent toll-like receptor 4 signaling pathway (ortholog); MyD88-independent toll-like receptor signaling pathway (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955421 3938054 4066701 - 102005383 AGCD01021673;AGCD01021674;AGCD01021675;AGCD01021676;GBDI01358248;XM_005383693;XM_005383702;XM_013513681;XM_013513682;XM_013513683;XM_013513684;XM_013513685;XM_013513686;XM_013513687;XM_013513688;XM_013513689;XM_013513690;XM_013513691 XP_005383750;XP_005383759;XP_013369135;XP_013369136;XP_013369137;XP_013369138;XP_013369139;XP_013369140;XP_013369141;XP_013369142;XP_013369143;XP_013369144;XP_013369145 MODEL 8755299 protein-coding Gli1 GLI family zinc finger 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cerebellar cortex morphogenesis (ortholog); dorsal/ventral pattern formation (ortholog); epidermal cell differentiation (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); ciliary tip (ortholog) NW_004955458 5181761 5193500 + 102028271 AGCD01047467;GBDF01103894;XM_005397375;XM_013520876;XM_013520877;XM_013520878 XP_005397432;XP_013376330;XP_013376331;XP_013376332 MODEL 8998286 protein-coding Lamtor3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); kinase activator activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to nutrient levels (ortholog); intracellular protein localization (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); late endosome membrane (ortholog) NW_004955496 7789210 7809143 + 102022618 AGCD01062385;GBDF01086384;XM_005406266;XM_013505384;XM_013505385 XP_005406323;XP_013360838;XP_013360839 MODEL 8994049 protein-coding Sirt4 sirtuin 4 ENCODES a protein that exhibits lipoamidase activity (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein-cysteine ADP-ribosyltransferase activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); DNA damage response (ortholog); L-glutamine metabolic process (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Cardiomegaly (ortholog); endomyocardial fibrosis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955455 11322812 11334786 - 102013381 AGCD01045997;GBCB01086523;XM_005396513;XM_005396514 XP_005396570;XP_005396571 MODEL 8951968 protein-coding Tnnt3 troponin T3, fast skeletal type ENCODES a protein that exhibits actin binding (ortholog); calcium-dependent protein binding (ortholog); tropomyosin binding (ortholog); INVOLVED IN regulation of striated muscle contraction (ortholog); skeletal muscle contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH congenital myopathy (ortholog); distal arthrogryposis type 2B (ortholog); distal arthrogryposis type 2B1 (ortholog); FOUND IN troponin complex (ortholog) NW_004955422 13702015 13718915 + 102029522 AGCD01022838;GBCB01024288;XM_013514170;XM_013514171;XM_013514172;XM_013514173;XM_013514174;XM_013514175;XM_013514176;XM_013514177;XM_013514178;XM_013514179;XM_013514180;XM_013514181;XM_013514182;XM_013514183 XP_013369624;XP_013369625;XP_013369626;XP_013369627;XP_013369628;XP_013369629;XP_013369630;XP_013369631;XP_013369632;XP_013369633;XP_013369634;XP_013369635;XP_013369636;XP_013369637 MODEL 8774020 protein-coding Tfeb transcription factor EB ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); cellular response to amino acid starvation (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lysosomal membrane (ortholog) NW_004955437 8102241 8141001 - 102013864 AGCD01034478;AGCD01034479;GBDF01156776;XM_005389689;XM_005389690 XP_005389746;XP_005389747 MODEL 8768510 ncrna LOC102016016 uncharacterized LOC102016016 NW_004955406 28620517 28625780 - 102016016 AGCD01006300;XR_259507 MODEL 8755527 pseudo LOC102009751 pre-mRNA-splicing factor RBM22 pseudogene NW_004955434 8957904 8962702 + 102009751 AGCD01032281;AGCD01032282 MODEL 9067450 protein-coding Suz12 SUZ12 polycomb repressive complex 2 subunit ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); enzyme activator activity (ortholog); INVOLVED IN chromatin organization (ortholog); facultative heterochromatin formation (ortholog); gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin silencing complex (ortholog); ESC/E(Z) complex (ortholog); nuclear body (ortholog) NW_004955481 6867175 6917548 + 102011314 AGCD01057041;AGCD01057042;GBCB01099124;GBDJ01279425;XM_013503467;XM_013503468 XP_013358921;XP_013358922 MODEL 8955391 ncrna LOC102020252 uncharacterized LOC102020252 NW_004955486 7287493 7296193 + 102020252 AGCD01059128;GBDF01248533;XR_263960 MODEL 8711447 protein-coding Rab1b RAB1B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); establishment of endothelial intestinal barrier (ortholog); Golgi organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955422 19039741 19047088 - 102017133 AGCD01022973;GBDJ01003487;XM_005384425 XP_005384482 MODEL 39132764 snrna U6 U6 spliceosomal RNA 8937117 protein-coding LOC102019162 protein FAM205A NW_004955472 1398923 1404948 + 102019162 AGCD01053390;GBDF01003693;XM_005401041 XP_005401098 MODEL 8763414 protein-coding Lin54 lin-54 DREAM MuvB core complex component ENCODES a protein that exhibits minor groove of adenine-thymine-rich DNA binding (ortholog); transcription regulatory region nucleic acid binding (ortholog); INVOLVED IN nucleosome organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN RNA polymerase II transcription repressor complex (ortholog) NW_004955474 6600766 6660904 + 102003017 AGCD01054482;AGCD01054483;GBBH01221828;GBDF01220818;XM_005401388;XM_005401389 XP_005401445;XP_005401446 MODEL 10350235 protein-coding Duxb double homeobox B NW_004955510 120981 140525 + 106146973 AGCD01066138;AGCD01066139;GBDF01221746;XM_013506306 XP_013361760 MODEL 9056656 protein-coding Gtf3c3 general transcription factor IIIC subunit 3 ENCODES a protein that exhibits RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN transcription initiation at RNA polymerase III promoter (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN fibrillar center (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) NW_004955403 3610938 3637893 + 102017729 AGCD01001770;GBCQ01004554;XM_005373273 XP_005373330 MODEL 9010803 protein-coding Gckr glucokinase regulator ENCODES a protein that exhibits carbohydrate binding (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN intracellular glucose homeostasis (ortholog); negative regulation of glucokinase activity (ortholog); protein import into nucleus (ortholog); PARTICIPATES IN glycogen metabolic pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); end stage renal disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955469 9461541 9485034 + 102004056 AGCD01052504;XM_005400572 XP_005400629 MODEL 8762401 ncrna LOC102023113 uncharacterized LOC102023113 NW_004955407 27659467 27670297 + 102023113 AGCD01007555;GBCQ01144581;XR_259591 MODEL 8715284 pseudo LOC102004542 zinc finger protein 14-like NW_004955607 5112 93169 + 102004542 AGCD01076967;AGCD01076968;AGCD01076969;AGCD01076970;AGCD01076971;AGCD01076972;AGCD01076973;AGCD01076974;XM_005414908 MODEL 8778790 protein-coding Tcf15 transcription factor 15 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); ear development (ortholog); establishment of epithelial cell apical/basal polarity (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955597 446489 452003 - 102026494 AGCD01076556;AGCD01076557;GBCB01098835;GBDJ01246848;XM_013510023 XP_013365477 MODEL 8711659 protein-coding Exoc6b exocyst complex component 6B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955424 12777638 13308358 + 102021892 AGCD01024619;AGCD01024620;AGCD01024621;AGCD01024622;AGCD01024623;AGCD01024624;AGCD01024625;AGCD01024626;AGCD01024627;AGCD01024628;AGCD01024629;AGCD01024630;GBDF01252038;XM_005385581;XM_005385582;XM_005385583;XM_013514675;XM_013514676;XM_013514677 XP_005385638;XP_005385639;XP_005385640;XP_013370129;XP_013370130;XP_013370131 MODEL 8952705 ncrna LOC102009372 uncharacterized LOC102009372 NW_004955470 3387443 3399619 - 102009372 AGCD01052700;GBDF01014209;XR_263462 MODEL 8973463 ncrna LOC102021351 uncharacterized LOC102021351 NW_004955485 4631152 4633682 - 102021351 AGCD01058572;GBDF01010932;XR_263905 MODEL 8979708 protein-coding Tspan8 tetraspanin 8 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN negative regulation of blood coagulation (ortholog); regulation of gene expression (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Arterial Occlusive Diseases (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955405 11200290 11233094 - 102030592 AGCD01004827;GBBH01001841;XM_005374318 XP_005374375 MODEL 9032128 protein-coding Smlr1 small leucine rich protein 1 ASSOCIATED WITH sarcoma (ortholog); stomach cancer (ortholog) NW_004955436 11639564 11647131 + 102029996 AGCD01033818;GBCQ01129815;XM_013516680 XP_013372134 MODEL 8869787 ncrna LOC102018766 uncharacterized LOC102018766 NW_004955437 5832129 5834651 + 102018766 AGCD01034403;GBDF01189685;XR_261858 MODEL 39132768 snrna U6 U6 spliceosomal RNA 9046786 protein-coding Gli2 GLI family zinc finger 2 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); axon guidance (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Animal Disease Models (ortholog); Anorectal Malformations (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955459 8892917 9124672 - 102015812 AGCD01048146;AGCD01048147;AGCD01048148;AGCD01048149;AGCD01048150;AGCD01048151;GBBH01168983;GBDJ01388667;XM_013521092 XP_013376546 MODEL 8881983 protein-coding Fhod3 formin homology 2 domain containing 3 INVOLVED IN actin filament network formation (ortholog); cardiac myofibril assembly (ortholog); negative regulation of actin filament polymerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN sarcomere (ortholog); striated muscle thin filament (ortholog) NW_004955402 22822060 23277993 + 102011489 AGCD01000613;AGCD01000614;AGCD01000615;AGCD01000616;AGCD01000617;AGCD01000618;AGCD01000619;AGCD01000620;AGCD01000621;GBCQ01095975;XM_005372817;XM_005372818;XM_005372820;XM_005372821;XM_005372822;XM_005372823;XM_005372824;XM_013510258;XM_013510260 XP_005372874;XP_005372875;XP_005372877;XP_005372878;XP_005372879;XP_005372880;XP_005372881;XP_013365712;XP_013365714 MODEL 8772923 protein-coding Slc7a9 solute carrier family 7 member 9 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); antiporter activity (ortholog); broad specificity neutral L-amino acid:basic L-amino acid antiporter activity (ortholog); INVOLVED IN amino acid transport (ortholog); L-cystine transport (ortholog); neutral amino acid transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH Abdominal Pain (ortholog); atrial heart septal defect (ortholog); Back Pain (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) NW_004955468 5112057 5201272 + 102027509 AGCD01051949;AGCD01051950;AGCD01051951;AGCD01051952;AGCD01051953;AGCD01051954;AGCD01051955;AGCD01051956;AGCD01051957;AGCD01051958;AGCD01051959;GBCQ01035248;GBDF01209757;XM_005400078 XP_005400135 MODEL 8765735 pseudo LOC102012585 cytochrome c oxidase protein 20 homolog pseudogene NW_004955441 6084988 6089834 + 102012585 AGCD01036899;XM_005391041 MODEL 8888554 protein-coding Kiaa0930 KIAA0930 ortholog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog) NW_004955413 29622818 29654493 - 102028403 AGCD01014588;GBCE01054386;GBDF01002364;XM_005379479 XP_005379536 MODEL 8924399 protein-coding Boc BOC cell adhesion associated, oncogene regulated ENCODES a protein that exhibits protein carrier activity (ortholog); INVOLVED IN axon guidance (ortholog); positive regulation of myoblast differentiation (ortholog); positive regulation of smoothened signaling pathway (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); growth cone (ortholog) NW_004955427 13424478 13492527 + 102003160 AGCD01027249;AGCD01027250;AGCD01027251;GBDJ01189062;XM_005386397;XM_005386398;XM_013515110;XM_013515111;XM_013515112 XP_005386454;XP_005386455;XP_013370564;XP_013370565;XP_013370566 MODEL 8770695 protein-coding Cwc15 CWC15 spliceosome associated protein homolog INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955605 32721 42981 + 102023419 AGCD01076929;GBCQ01062528;XM_005414886 XP_005414943 MODEL 8960637 protein-coding Nrde2 NRDE-2, necessary for RNA interference, domain containing INVOLVED IN DNA damage response (ortholog); mitotic cell cycle (ortholog); mRNA stabilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrion (ortholog); nuclear speck (ortholog); nucleolus (ortholog) NW_004955438 12726206 12780364 - 102013008 AGCD01035267;AGCD01035268;AGCD01035269;AGCD01035270;AGCD01035271;GBDK01357328;XM_005390282 XP_005390339 MODEL 39133634 snrna U4 U4 spliceosomal RNA 8839737 protein-coding LOC102007856 uncharacterized protein C3orf26 homolog NW_004955407 20972503 20976017 - 102007856 AGCD01007347;XM_013505935 XP_013361389 MODEL 8952717 pseudo LOC102012956 septin-2 pseudogene NW_004955474 8331644 8332821 - 102012956 AGCD01054549 MODEL 8900255 pseudo LOC102017947 sorting nexin-6 pseudogene NW_004955405 9414066 9415333 + 102017947 AGCD01004772 MODEL 8805941 ncrna LOC102022060 uncharacterized LOC102022060 NW_004955464 3304287 3323290 - 102022060 AGCD01049973;GBCB01109756;XR_001236673 MODEL 8732609 protein-coding Tcf19 transcription factor 19 INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); regulation of gene expression (ortholog); type B pancreatic cell proliferation (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955583 989388 994180 + 102025193 AGCD01075876;GBDF01304795;XM_005414334 XP_005414391 MODEL 10092732 pseudo LOC106147322 zinc finger protein 655-like NW_004955408 2254152 2256074 + 106147322 AGCD01008001 MODEL 8834922 protein-coding Dmpk DM1 protein kinase ENCODES a protein that exhibits ATP binding (ortholog); myosin phosphatase regulator activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); muscle cell apoptotic process (ortholog); nuclear envelope organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955574 225615 237526 - 102020856 AGCD01075093;GBBH01011956;XM_005413811;XM_005413812;XM_005413813;XM_013509518;XM_013509519;XM_013509520;XM_013509521;XM_013509522;XM_013509523;XM_013509524;XM_013509525;XM_013509526 XP_005413868;XP_005413869;XP_005413870;XP_013364972;XP_013364973;XP_013364974;XP_013364975;XP_013364976;XP_013364977;XP_013364978;XP_013364979;XP_013364980 MODEL 8951860 protein-coding LOC102025273 olfactory receptor 4C16-like NW_004955511 350502 351545 + 102025273 AGCD01066328;XM_005407942 XP_005407999 MODEL 8762306 protein-coding Txn2 thioredoxin 2 ENCODES a protein that exhibits oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor (ortholog); peptide-methionine (R)-S-oxide reductase activity (ortholog); peptide-methionine (S)-S-oxide reductase activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); response to axon injury (ortholog); response to glucose (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); combined oxidative phosphorylation deficiency 29 (ortholog); FOUND IN dendrite (ortholog); mitochondrion (ortholog); neuronal cell body (ortholog) NW_004955413 23044866 23056017 - 102019493 AGCD01014325;GBDF01052906;XM_005379160;XM_005379161 XP_005379217;XP_005379218 MODEL 8773708 protein-coding Tspan9 tetraspanin 9 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN collagen-activated tyrosine kinase receptor signaling pathway (ortholog); mitocytosis (ortholog); neutrophil homeostasis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN extracellular matrix (ortholog); membrane (ortholog); migrasome (ortholog) NW_004955429 18696528 18772593 + 102026660 AGCD01028921;GBDF01307566;XM_005387133 XP_005387190 MODEL 39133016 snrna U6 U6 spliceosomal RNA 8781993 protein-coding Slc22a7 solute carrier family 22 member 7 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); prostaglandin transmembrane transporter activity (ortholog); secondary active transmembrane transporter activity (ortholog); INVOLVED IN alpha-ketoglutarate transport (ortholog); prostaglandin transport (ortholog); response to stilbenoid (ortholog); PARTICIPATES IN multispecific organic anion transporter mediated transport pathway; ASSOCIATED WITH Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955437 9204414 9210350 + 102007276 AGCD01034522;GBDJ01341934;XM_005389765 XP_005389822 MODEL 8756733 protein-coding Il1rapl2 interleukin 1 receptor accessory protein like 2 INVOLVED IN regulation of presynapse assembly (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog) NW_004955548 1462746 2623622 + 102005640 AGCD01072376;AGCD01072377;AGCD01072378;AGCD01072379;AGCD01072380;AGCD01072381;AGCD01072382;AGCD01072383;AGCD01072384;AGCD01072385;AGCD01072386;AGCD01072387;AGCD01072388;AGCD01072389;AGCD01072390;AGCD01072391;AGCD01072392;AGCD01072393;AGCD01072394;AGCD01072395;AGCD01072396;AGCD01072397;AGCD01072398;AGCD01072399;AGCD01072400;AGCD01072401;AGCD01072402;AGCD01072403;AGCD01072404;AGCD01072405;AGCD01072406;AGCD01072407;XM_005412011 XP_005412068 MODEL 39132260 snrna U6 U6 spliceosomal RNA 8914520 ncrna LOC102003476 uncharacterized LOC102003476 NW_004955431 22858925 22862195 + 102003476 AGCD01030524;GBDJ01402645;XR_261494 MODEL 8846217 protein-coding Samd13 sterile alpha motif domain containing 13 ASSOCIATED WITH high grade glioma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955423 9531538 9574312 - 102003979 AGCD01023662;GBDF01083942;XM_005385162;XM_005385163;XM_005385164;XM_013514573;XM_013514574 XP_005385219;XP_005385220;XP_005385221;XP_013370027;XP_013370028 MODEL 8820164 pseudo LOC102003804 thyrotropin-releasing hormone receptor-like NW_004955541 2505471 2509425 - 102003804 AGCD01071413 MODEL 9066078 protein-coding Bod1 biorientation of chromosomes in cell division 1 ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN mitotic metaphase chromosome alignment (ortholog); mitotic sister chromatid biorientation (ortholog); mitotic sister chromatid cohesion, centromeric (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Arachnoid Cysts (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); outer kinetochore (ortholog); Set1C/COMPASS complex (ortholog) NW_004955408 26235229 26242576 - 102025658 AGCD01008665;GBDF01008932;XM_005376586 XP_005376643 MODEL 8933938 protein-coding Lrriq1 leucine rich repeats and IQ motif containing 1 INVOLVED IN apoptotic process (ortholog); gene expression (ortholog); single fertilization (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955405 23004726 23245774 + 102004886 AGCD01005116;AGCD01005117;AGCD01005118;AGCD01005119;AGCD01005120;AGCD01005121;AGCD01005122;GBDF01120031;XM_013518073;XM_013518074;XM_013518081;XM_013518086;XM_013518087;XM_013518090;XM_013518092;XM_013518100;XM_013518105;XM_013518106;XM_013518110 XP_013373527;XP_013373528;XP_013373535;XP_013373540;XP_013373541;XP_013373544;XP_013373546;XP_013373554;XP_013373559;XP_013373560;XP_013373564 MODEL 8921275 protein-coding Scmh1 Scm polycomb group protein homolog 1 INVOLVED IN anterior/posterior pattern specification (ortholog); chromatin remodeling (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromocenter (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955537 819209 971297 - 102006390 AGCD01070875;AGCD01070876;AGCD01070877;AGCD01070878;AGCD01070879;AGCD01070880;AGCD01070881;XM_005410586;XM_013507788;XM_013507789;XM_013507790;XM_013507791;XM_013507792 XP_005410643;XP_013363242;XP_013363243;XP_013363244;XP_013363245;XP_013363246 MODEL 8851566 protein-coding LOC102010542 toll-like receptor 12 NW_004955452 11635179 11638291 + 102010542 AGCD01044342;GBDK01385301;XM_013519712 XP_013375166 MODEL 8746919 protein-coding Tagln2 transgelin 2 INVOLVED IN epithelial cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); esophageal cancer (ortholog) NW_004955468 11713809 11721125 - 102009367 AGCD01052137;AY533232;GBBH01003714;XM_005400179;XM_005400180 XP_005400236;XP_005400237 MODEL 8737456 protein-coding Lamtor4 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to nutrient levels (ortholog); positive regulation of TOR signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) NW_004955573 649604 653185 - 102027244 AGCD01074996;GBCB01103131;XM_005413740;XM_013509468 XP_005413797;XP_013364922 MODEL 8986325 pseudo LOC102016019 receptor-interacting serine/threonine-protein kinase 1 pseudogene NW_004955406 7239021 7248768 + 102016019 AGCD01005767 MODEL 8981763 ncrna LOC102014127 uncharacterized LOC102014127 NW_004955468 11890174 11900706 - 102014127 AGCD01052139;GBDF01260300;XR_001236905;XR_001236906;XR_263416 MODEL 8709530 protein-coding Tnp1 transition protein 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); flagellated sperm motility (ortholog); heterochromatin formation (ortholog); FOUND IN chromosome (ortholog); male germ cell nucleus (ortholog); nucleosome (ortholog) NW_004955453 16387897 16388513 + 102021623 AGCD01044902;GBDF01007631;XM_005395680 XP_005395737 MODEL 8764207 protein-coding LOC102005239 vomeronasal type-1 receptor 4-like NW_004955465 13086650 13087604 + 102005239 AGCD01050584;XM_005398946 XP_005399003 MODEL 8904727 protein-coding LOC102021360 heat shock transcription factor, Y-linked-like NW_004955494 8274458 8275841 - 102021360 AGCD01061582;GBDF01086027;XM_005405513 XP_005405570 MODEL 8713459 protein-coding Rab20 RAB20, member RAS oncogene family INVOLVED IN cellular response to type II interferon (ortholog); phagosome acidification (ortholog); phagosome-lysosome fusion (ortholog); ASSOCIATED WITH COVID-19 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); phagocytic vesicle (ortholog) NW_004955404 2087580 2088545 + 102014972 AGCD01003250;GBCQ01098101;GBDK01193260;XM_013515757 XP_013371211 MODEL 39132765 snrna U6 U6 spliceosomal RNA 8812226 protein-coding LOC102019163 uncharacterized LOC102019163 NW_004955414 24573632 24634114 + 102019163 AGCD01015548;AGCD01015549;AGCD01015550;XM_005380524 XP_005380581 MODEL 8886991 ncrna LOC102005243 uncharacterized LOC102005243 NW_004955467 11763835 11774999 + 102005243 AGCD01051617;GBDF01234200;XR_263363 MODEL 8801573 protein-coding Dvl1 dishevelled segment polarity protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); enzyme binding (ortholog); frizzled binding (ortholog); INVOLVED IN axon extension (ortholog); axon guidance (ortholog); axonogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); autosomal dominant Robinow syndrome 2 (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN axon (ortholog); clathrin-coated vesicle (ortholog); cytoplasm (ortholog) NW_004955486 9464390 9469984 + 102024343 AGCD01059187;GBBH01061708;GBBH01061716;XM_013504189 XP_013359643 MODEL 10184180 protein-coding LOC106147323 uncharacterized LOC106147323 NW_004955542 1950634 1959869 + 106147323 AGCD01071509;GBCE01111548;XM_013508128;XM_013508129;XM_013508130;XM_013508131;XM_013508132;XR_001232171 XP_013363582;XP_013363583;XP_013363584;XP_013363585;XP_013363586 MODEL 8720314 protein-coding Gtf3c4 general transcription factor IIIC subunit 4 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); protein-lysine-acetyltransferase activity (ortholog); RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN transcription initiation at RNA polymerase III promoter (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); high grade glioma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription factor TFIIIC complex (ortholog) NW_004955513 2037312 2054451 + 102027560 AGCD01066868;GBDI01019040;GBDI01019069;XM_005408381 XP_005408438 MODEL 39133635 snrna U4 U4 spliceosomal RNA 8955236 protein-coding Gclc glutamate-cysteine ligase catalytic subunit ENCODES a protein that exhibits ADP binding (ortholog); glutamate binding (ortholog); glutamate-cysteine ligase activity (ortholog); INVOLVED IN response to auditory stimulus; blood vessel diameter maintenance (ortholog); cell redox homeostasis (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; cysteine metabolic pathway; glutamic acid/glutamate metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amino acid metabolic disorder (ortholog); cataract (ortholog); FOUND IN cytosol (ortholog); glutamate-cysteine ligase complex (ortholog) NW_004955411 2593523 2617553 + 102009808 AGCD01011514;GBCE01117484;XM_005377605 XP_005377662 MODEL 8971778 protein-coding Nrep neuronal regeneration related protein INVOLVED IN axon regeneration (ortholog); regulation of neuron differentiation (ortholog); regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955418 3435784 3464667 + 102014781 AGCD01018791;GBDF01041120;XM_005382159 XP_005382216 MODEL 8814121 protein-coding LOC102004544 histone H3-like NW_004955403 18749690 18755615 - 102004544 AGCD01002110;GBDI01222345;XM_005373397 XP_005373454 MODEL 9000101 protein-coding Tfec transcription factor EC ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to heat (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955432 21751697 21813199 - 102009642 AGCD01031233;AGCD01031234;GBCQ01150400;XM_005388113;XM_005388115;XM_013516081;XM_013516082 XP_005388170;XP_005388172;XP_013371535;XP_013371536 MODEL 8832580 protein-coding Sv2a synaptic vesicle glycoprotein 2A ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); modulation of inhibitory postsynaptic potential (ortholog); negative regulation of excitatory postsynaptic potential (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); developmental and epileptic encephalopathy 113 (ortholog); esophageal cancer (ortholog); FOUND IN cell-cell junction (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) NW_004955413 834743 849176 + 102022270 AGCD01013491;GBCQ01143514;XM_005378709 XP_005378766 MODEL 8871207 protein-coding LOC102009752 glutathione S-transferase Mu 2 NW_004955435 13200085 13206236 + 102009752 AGCD01033197;GBCQ01122645;XM_013516459;XM_013516460 XP_013371913;XP_013371914 MODEL 8852622 ncrna LOC102009373 uncharacterized LOC102009373 NW_004955471 267562 303293 + 102009373 AGCD01052952;AGCD01052953;AGCD01052954;GBDK01102526;XR_001237060;XR_263510 MODEL 8732681 protein-coding Exoc7 exocyst complex component 7 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of mitotic cytokinetic process (ortholog); protein localization to ciliary membrane (ortholog); protein transmembrane transport (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centriolar satellite (ortholog); ciliary basal body (ortholog) NW_004955506 6150297 6166920 + 102030652 AGCD01065402;GBDF01049891;XM_005407446;XM_005407447;XM_005407448;XM_005407449;XM_005407450;XM_005407451;XM_005407452;XM_005407453 XP_005407503;XP_005407504;XP_005407505;XP_005407506;XP_005407507;XP_005407508;XP_005407509;XP_005407510 MODEL 9035524 pseudo LOC102020254 cytochrome c oxidase subunit 7C, mitochondrial pseudogene NW_004955489 2304498 2305186 + 102020254 AGCD01059864;XM_005404523 MODEL 9066614 pseudo LOC102018769 zinc finger CCHC-type and RNA-binding motif-containing protein 1 pseudogene NW_004955439 2361444 2362083 + 102018769 AGCD01035643 MODEL 39132769 snrna U6 U6 spliceosomal RNA 8833944 protein-coding Smndc1 survival motor neuron domain containing 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nuclear body (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955485 1070596 1081979 + 102016920 AGCD01058470;GBCQ01149251;XM_005403757;XM_005403758 XP_005403814;XP_005403815 MODEL 8710025 ncrna LOC102017953 uncharacterized LOC102017953 NW_004955455 12326192 12375978 + 102017953 AGCD01046033;AGCD01046034;AGCD01046035;AGCD01046036;GBCB01036113;XR_262857 MODEL 9011118 protein-coding Gli3 GLI family zinc finger 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anterior semicircular canal development (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); anodontia (ortholog); Anorectal Malformations (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955460 1528457 1805584 + 102014330 AGCD01048376;AGCD01048377;AGCD01048378;AGCD01048379;GBCE01181687;XM_013521254;XM_013521255;XM_013521256 XP_013376708;XP_013376709;XP_013376710 MODEL 9030715 protein-coding Lin7a lin-7 cell polarity scaffold A ENCODES a protein that exhibits L27 domain binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN inner ear development (ortholog); neurotransmitter secretion (ortholog); synaptic vesicle transport (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); synapse (ortholog) NW_004955405 19403002 19548716 - 102023106 AGCD01005035;AGCD01005036;AGCD01005037;AGCD01005038;GBDJ01263209;XM_005374368;XM_005374369;XM_005374370;XM_013517946 XP_005374425;XP_005374426;XP_005374427;XP_013373400 MODEL 8892923 protein-coding Tnp2 transition protein 2 ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN acrosome reaction (ortholog); binding of sperm to zona pellucida (ortholog); flagellated sperm motility (ortholog); FOUND IN chromosome (ortholog); nucleosome (ortholog); nucleus (ortholog) NW_004955442 7311826 7314046 + 102005850 AGCD01037623;GBDK01130457;XM_013517647 XP_013373101 MODEL 9043884 protein-coding Dmrt1 doublesex and mab-3 related transcription factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell morphogenesis (ortholog); developmental process involved in reproduction (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH 46,XY complete gonadal dysgenesis (ortholog); 46,XY sex reversal 4 (ortholog); Adrenal Insufficiency (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955434 5341519 5448049 + 102014704 AGCD01032188;AGCD01032189;GBDF01118169;XM_005388599;XM_013516377 XP_005388656;XP_013371831 MODEL 8951864 protein-coding Kiaa1107 KIAA1107 ortholog NW_004955423 2291192 2379556 - 102025476 AGCD01023472;GBCB01100877;XM_005385055;XM_005385056;XM_013514536;XM_013514537 XP_005385112;XP_005385113;XP_013369990;XP_013369991 MODEL 8869109 protein-coding LOC102023118 olfactory receptor 6C2-like NW_004955458 2974880 2975827 + 102023118 AGCD01047263;XM_005397505 XP_005397562 MODEL 8901704 protein-coding Slc22a8 solute carrier family 22 member 8 ENCODES a protein that exhibits antiporter activity (ortholog); prostaglandin transmembrane transporter activity (ortholog); protein kinase C binding (ortholog); INVOLVED IN glutathione transport (ortholog); prostaglandin transport (ortholog); quaternary ammonium group transport (ortholog); PARTICIPATES IN ibuprofen pharmacodynamics pathway; ibuprofen pharmacokinetics pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); Human Influenza (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955599 284038 299603 + 102002974 AGCD01076637;GBDF01062374;XM_005414750;XM_005414751;XM_005414752 XP_005414807;XP_005414808;XP_005414809 MODEL 39132261 snrna U6 U6 spliceosomal RNA 8974694 protein-coding LOC102007857 gamma-crystallin A NW_004955457 6963680 6966414 + 102007857 AGCD01046861;XM_005396969 XP_005397026 MODEL 9063370 protein-coding LOC102022061 cytochrome b-c1 complex subunit 6, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); quinol-cytochrome-c reductase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) NW_004955464 11963706 11975959 - 102022061 AGCD01050169;GBCC01028028;XM_005398683 XP_005398740 MODEL 8764787 protein-coding Lrriq3 leucine rich repeats and IQ motif containing 3 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955423 18438848 18585627 + 102029411 AGCD01023873;AGCD01023874;AGCD01023875;AGCD01023876;GBDF01053937;XM_013514453;XM_013514454 XP_013369907;XP_013369908 MODEL 8964926 pseudo LOC102014128 tetraspanin-11-like NW_004955413 1127662 1159892 - 102014128 AGCD01013511 MODEL 8723404 protein-coding Xpnpep2 X-prolyl aminopeptidase 2 ENCODES a protein that exhibits aminopeptidase activity (ortholog); PARTICIPATES IN kallikrein-kinin cascade pathway; ASSOCIATED WITH acquired angioedema (ortholog); acute myeloid leukemia (ortholog); angioedema (ortholog); FOUND IN extracellular exosome (ortholog) NW_004955473 5248065 5274469 - 102013166 AGCD01053973;GBCQ01010121;XM_005401259 XP_005401316 MODEL 8895764 protein-coding LOC102016025 chromosome unknown open reading frame, human C5orf58 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955408 23186712 23197682 + 102016025 AGCD01008584;GBBH01090853;XM_013507057;XM_013507065;XM_013507066;XM_013507072;XM_013507076;XM_013507077;XM_013507079 XP_013362511;XP_013362519;XP_013362520;XP_013362526;XP_013362530;XP_013362531;XP_013362533 MODEL 8766958 ncrna LOC102012592 uncharacterized LOC102012592 NW_004955583 223012 224427 - 102012592 AGCD01075806;GBDF01221589;XR_001232492 MODEL 8714406 protein-coding LOC102025274 olfactory receptor 9I1-like NW_004955511 2929294 2930226 + 102025274 AGCD01066436;XM_005408021 XP_005408078 MODEL 9023679 protein-coding Rab21 RAB21, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); positive regulation of dendrite morphogenesis (ortholog); positive regulation of early endosome to late endosome transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasmic side of early endosome membrane (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955405 11766674 11778637 + 102019564 AGCD01004842;GBCB01003208;GBCE01134842;XM_013517632 XP_013373086 MODEL 8914094 protein-coding Sirt5 sirtuin 5 ENCODES a protein that exhibits NAD+ binding (ortholog); protein-glutaryllysine deglutarylase activity (ortholog); protein-malonyllysine demalonylase activity (ortholog); INVOLVED IN negative regulation of cardiac muscle cell apoptotic process (ortholog); negative regulation of reactive oxygen species metabolic process (ortholog); regulation of ketone biosynthetic process (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; ASSOCIATED WITH anxiety disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955465 1129217 1167604 - 102011419 AGCD01050331;AGCD01050332;AGCD01050333;AGCD01050334;AGCD01050335;AGCD01050336;GBDJ01185808;XM_005398799 XP_005398856 MODEL 39133017 snrna U6 U6 spliceosomal RNA 8995004 pseudo LOC102012958 retinol dehydrogenase 14 pseudogene NW_004955476 11736864 11740171 - 102012958 AGCD01055474 MODEL 9005382 ncrna LOC102005245 uncharacterized LOC102005245 NW_004955468 5664674 5675915 + 102005245 AGCD01051973;GBDF01154207;XR_001236889;XR_263388;XR_263389;XR_263390 MODEL 8776911 pseudo LOC102003478 pre-mRNA-splicing regulator WTAP-like NW_004955514 116863 117609 + 102003478 AGCD01066997 MODEL 10093922 protein-coding LOC106147324 melanoma-associated antigen D4-like NW_004955543 3289159 3291441 + 106147324 AGCD01071679;GBBH01180294;GBDK01358192;XM_013508136 XP_013363590 MODEL 8920577 protein-coding Il1rl1 interleukin 1 receptor like 1 ENCODES a protein that exhibits interleukin-33 binding (ortholog); interleukin-33 receptor activity (ortholog); INVOLVED IN cellular response to endothelin (ortholog); cellular response to mechanical stimulus (ortholog); inflammatory response (ortholog); ASSOCIATED WITH acute asthma (ortholog); Acute Lung Injury (ortholog); acute myocardial infarction (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular matrix (ortholog) NW_004955470 7779828 7849157 + 102020238 AGCD01052809;AGCD01052810;AGCD01052811;AGCD01052812;GBCE01046532;XM_005400767;XM_005400768;XM_013522847;XM_013522848;XM_013522849;XM_013522850;XM_013522851;XM_013522852;XM_013522853;XM_013522854 XP_005400824;XP_005400825;XP_013378301;XP_013378302;XP_013378303;XP_013378304;XP_013378305;XP_013378306;XP_013378307;XP_013378308 MODEL 8763015 protein-coding Samd14 sterile alpha motif domain containing 14 ASSOCIATED WITH Breast Cancer, Familial (ortholog); hereditary breast ovarian cancer syndrome (ortholog); lung cancer (ortholog) NW_004955451 11536639 11547402 + 102016012 AGCD01043358;AGCD01043359;GBDF01240504;GBDJ01056730;XM_013519104 XP_013374558 MODEL 9053756 protein-coding Tagln3 transgelin 3 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); FOUND IN nucleus (ortholog); synapse (ortholog) NW_004955427 12412959 12426400 + 102024031 AGCD01027213;AGCD01027214;GBCB01053023;XM_013515214 XP_013370668 MODEL 8753086 protein-coding Fibcd1 fibrinogen C domain containing 1 ENCODES a protein that exhibits chitin binding (ortholog); ASSOCIATED WITH lung cancer (ortholog); lung squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN membrane (ortholog) NW_004955513 810927 835106 - 102018210 AGCD01066832;XM_005408350;XM_013506563 XP_005408407;XP_013362017 MODEL 8963158 pseudo LOC102004548 60S ribosomal protein L32 pseudogene NW_004957060 748 1529 + 102004548 AGCD01080456 MODEL 8950722 protein-coding Tcf20 transcription factor 20 ENCODES a protein that exhibits minor groove of adenine-thymine-rich DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Anorectal Malformations (ortholog); anxiety disorder (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955413 27677377 27726990 - 102009489 AGCD01014530;GBCB01100250;XM_005379412;XM_005379413;XM_005379414 XP_005379469;XP_005379470;XP_005379471 MODEL 8827418 ncrna LOC102021362 uncharacterized LOC102021362 NW_004955423 24524994 24528461 + 102021362 AGCD01024036;GBCB01042350;XR_260993 MODEL 9036209 protein-coding Slc8a1 solute carrier family 8 member A1 ENCODES a protein that exhibits ankyrin binding (ortholog); calcium ion binding (ortholog); calcium:monoatomic cation antiporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration (ortholog); INVOLVED IN calcium ion export (ortholog); calcium ion homeostasis (ortholog); calcium ion import (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); basolateral plasma membrane (ortholog) NW_004955441 7653107 8037784 - 102017708 AGCD01036968;AGCD01036969;AGCD01036970;AGCD01036971;AGCD01036972;AGCD01036973;AGCD01036974;GBCQ01100771;XM_005390909;XM_005390910;XM_005390911;XM_005390912;XM_013517578;XM_013517579;XM_013517580;XM_013517581;XM_013517582 XP_005390966;XP_005390967;XP_005390968;XP_005390969;XP_013373032;XP_013373033;XP_013373034;XP_013373035;XP_013373036 MODEL 8852981 protein-coding LOC102018771 ETS translocation variant 3 NW_004955545 3146221 3160533 - 102018771 AGCD01071933;GBDK01237418;XM_005411739;XM_005411741 XP_005411796;XP_005411798 MODEL 8840078 protein-coding Sv2b synaptic vesicle glycoprotein 2B INVOLVED IN regulation of presynaptic cytosolic calcium ion concentration (ortholog); regulation of synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); kidney disease (ortholog); lung cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); synaptic vesicle (ortholog); synaptic vesicle membrane (ortholog) NW_004955416 19456414 19650782 + 102014894 AGCD01017426;AGCD01017427;AGCD01017428;AGCD01017429;AGCD01017430;AGCD01017431;AGCD01017432;AGCD01017433;AGCD01017434;AGCD01017435;AGCD01017436;AGCD01017437;GBDJ01295745;XM_005381593;XM_005381594;XM_013512679;XM_013512680;XM_013512681;XM_013512682 XP_005381650;XP_005381651;XP_013368133;XP_013368134;XP_013368135;XP_013368136 MODEL 8887315 protein-coding LOC102020260 malignant T-cell-amplified sequence 1-like NW_004955422 29383965 29386096 - 102020260 AGCD01023393;GBCE01028271;XM_005384907 XP_005384964 MODEL 8836963 protein-coding LOC102019169 translation initiation factor IF-2-like NW_004955417 15890315 15897505 + 102019169 AGCD01018246;GBDF01147172;XM_013512712 XP_013368166 MODEL 39132766 snrna U6 U6 spliceosomal RNA 8816859 protein-coding Cwc22 CWC22 spliceosome associated protein homolog ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955403 17070588 17125918 + 102021297 AGCD01002070;GBCE01007893;XM_005373357;XM_013512563 XP_005373414;XP_013368017 MODEL 8786703 protein-coding Smo smoothened, frizzled class receptor ENCODES a protein that exhibits cholesterol binding (ortholog); G protein-coupled receptor activity (ortholog); oxysterol binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); anterior/posterior pattern specification (ortholog); apoptotic process (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Adenomatous Polyps (ortholog); ameloblastoma (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); axonal growth cone (ortholog); caveola (ortholog) NW_004955479 9963377 9991670 + 102024563 AGCD01056511;AGCD01056512;AGCD01056513;GBBH01143091;GBDF01304674;XM_013503270 XP_013358724 MODEL 8759728 protein-coding Tspear thrombospondin type laminin G domain and EAR repeats INVOLVED IN hair cycle process (ortholog); Notch signaling pathway (ortholog); regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH anhidrosis (ortholog); anodontia (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); ciliary membrane (ortholog); extracellular region (ortholog) NW_004955407 41513538 41566931 - 102009147 AGCD01007870;GBDJ01386456;XM_013506099 XP_013361553 MODEL 8969200 protein-coding Scml1 Scm polycomb group protein like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955519 578343 591299 - 102003576 AGCD01067878;GBDJ01403258;XM_013507015 XP_013362469 MODEL 8721051 protein-coding Tnpo1 transportin 1 INVOLVED IN protein import into nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955425 27666091 27748920 - 102009966 AGCD01025978;AGCD01025979;AGCD01025980;AGCD01025981;AGCD01025982;GBCB01061676;XM_005386079;XM_005386080;XM_005386081;XM_005386082;XM_013514849 XP_005386136;XP_005386137;XP_005386138;XP_005386139;XP_013370303 MODEL 8929279 pseudo LOC102010543 ferritin light chain pseudogene NW_004955405 19953476 19961761 - 102010543 AGCD01005050 MODEL 8820173 protein-coding Gtf3c5 general transcription factor IIIC subunit 5 ENCODES a protein that exhibits RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN skeletal muscle cell differentiation (ortholog); transcription initiation at RNA polymerase III promoter (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); infantile-onset myofibrillar myopathy 12 with cardiomyopathy (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription factor TFIIIC complex (ortholog) NW_004955513 2304133 2320977 + 102005163 AGCD01066872;GBDI01386679;XM_005408403 XP_005408460 MODEL 8750443 protein-coding Gclm glutamate-cysteine ligase modifier subunit ENCODES a protein that exhibits glutamate-cysteine ligase activity (ortholog); glutamate-cysteine ligase catalytic subunit binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); blood vessel diameter maintenance (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; cysteine metabolic pathway; glutamic acid/glutamate metabolic pathway; ASSOCIATED WITH berylliosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); esophageal cancer (ortholog); FOUND IN glutamate-cysteine ligase complex (ortholog) NW_004955423 782468 805384 + 102011455 AGCD01023420;AGCD01023421;GBBH01187846;XM_005385004 XP_005385061 MODEL 8736748 protein-coding Nrf1 nuclear respiratory factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); mitochondrion organization (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Bowen's Disease (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955479 10325214 10471421 + 102010801 AGCD01056534;AGCD01056535;AGCD01056536;AGCD01056537;AGCD01056538;AGCD01056539;GBDJ01273820;XM_005402417;XM_013503276;XM_013503277;XM_013503278;XM_013503279;XM_013503280;XM_013503281;XM_013503282;XM_013503283;XM_013503284 XP_005402474;XP_013358730;XP_013358731;XP_013358732;XP_013358733;XP_013358734;XP_013358735;XP_013358736;XP_013358737;XP_013358738 MODEL 8827324 protein-coding Tff1 trefoil factor 1 INVOLVED IN cell differentiation (ortholog); maintenance of gastrointestinal epithelium (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH Achlorhydria (ortholog); Acute Lung Injury (ortholog); Breast Cancer, Familial (ortholog); FOUND IN extracellular region (ortholog) NW_004955407 39363693 39365724 + 102014322 AGCD01007824;XM_005375829;XM_013506349 XP_005375886;XP_013361803 MODEL 9001508 pseudo LOC102009753 ADP-ribosylation factor-like protein 15 pseudogene NW_004955436 1336836 1341038 - 102009753 AGCD01033575 MODEL 8744471 protein-coding Slc23a1 solute carrier family 23 member 1 ENCODES a protein that exhibits dehydroascorbic acid transmembrane transporter activity (ortholog); L-ascorbate:sodium symporter activity (ortholog); L-ascorbic acid transmembrane transporter activity (ortholog); INVOLVED IN brain development (ortholog); dehydroascorbic acid transport (ortholog); L-ascorbic acid transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholestasis (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); brush border (ortholog) NW_004955418 1176390 1192270 + 102019599 AGCD01018712;GBDJ01116644;XM_005382074;XM_005382075;XM_005382076;XM_005382077;XM_013512911 XP_005382131;XP_005382132;XP_005382133;XP_005382134;XP_013368365 MODEL 8933501 pseudo LOC102007860 60S ribosomal protein L5-like NW_004955408 33188427 33213642 + 102007860 AGCD01008863 MODEL 10100051 pseudo LOC106147325 transmembrane protein 59-like NW_004955543 1110698 1120290 - 106147325 AGCD01071613 MODEL 8979412 pseudo LOC102017959 olfactory receptor 6C3-like NW_004955458 2571769 2572702 + 102017959 AGCD01047237 MODEL 8891127 protein-coding Txndc11 thioredoxin domain containing 11 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955442 6887538 6959324 + 102004525 AGCD01037603;AGCD01037604;AGCD01037605;AGCD01037606;AGCD01037607;AGCD01037608;GBBH01093706;GBCQ01140909;XM_013517809 XP_013373263 MODEL 8976980 protein-coding Lrriq4 leucine rich repeats and IQ motif containing 4 ASSOCIATED WITH high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955420 66770 100154 + 102013613 AGCD01020530;AGCD01020531;AGCD01020532;GBDF01225997;XM_005382953;XM_005382955;XM_013513525;XM_013513526 XP_005383010;XP_005383012;XP_013368979;XP_013368980 MODEL 8842626 protein-coding Lin7b lin-7 cell polarity scaffold B ENCODES a protein that exhibits PDZ domain binding (ortholog); protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN neurotransmitter secretion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell-cell junction (ortholog); plasma membrane (ortholog) NW_004955559 1610924 1613736 - 102020061 AGCD01073653;GBCB01002101;XM_013509002;XM_013509003 XP_013364456;XP_013364457 MODEL 9043841 ncrna LOC102012598 uncharacterized LOC102012598 NW_004955403 57139269 57141788 + 102012598 AGCD01003149;GBBH01126380;XR_001234448;XR_259277;XR_259278 MODEL 39131392 protein-coding DMRT2 doublesex and mab-3 related transcription factor 2 8912971 protein-coding Bod1l1 biorientation of chromosomes in cell division 1 like 1 INVOLVED IN DNA damage response (ortholog); replication fork processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); Set1C/COMPASS complex (ortholog) NW_004955480 10143053 10189194 + 102025577 AGCD01056757;GBCE01104986;GBDF01162845;XM_013503319 XP_013358773 MODEL 8872467 pseudo LOC102025275 heterogeneous nuclear ribonucleoprotein H3-like NW_004955429 20021277 20022100 - 102025275 AGCD01028976 MODEL 39133636 snrna U4 U4 spliceosomal RNA 8915499 pseudo LOC102012960 E3 ubiquitin-protein ligase Mdm2 pseudogene NW_004955416 14407621 14422095 - 102012960 AGCD01017262;AGCD01017263;AGCD01017264 MODEL 8799521 protein-coding Lamtor5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to nutrient levels (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); glucose intolerance (ortholog); FOUND IN cytosol (ortholog); FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog) NW_004955435 13896320 13900742 - 102026466 AGCD01033212;GBCB01000421;XM_013516568 XP_013372022 MODEL 39132262 snrna U6 U6 spliceosomal RNA 9037698 protein-coding Samd15 sterile alpha motif domain containing 15 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); pheochromocytoma/paraganglioma syndrome 1 (ortholog) NW_004955438 1273054 1283424 + 102014947 AGCD01034977;GBDF01081089;XM_005390196;XM_005390199;XM_013517155 XP_005390253;XP_005390256;XP_013372609 MODEL 8901558 pseudo LOC102022062 aldose reductase-related protein 2 pseudogene NW_004955412 7565711 7566629 - 102022062 AGCD01012701 MODEL 8859232 protein-coding Exoc8 exocyst complex component 8 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); small GTPase binding (ortholog); INVOLVED IN endosome organization (ortholog); exocytosis (ortholog); extracellular matrix disassembly (ortholog); ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, SEIZURES, AND BRAIN ATROPHY (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); cell leading edge (ortholog); ciliary base (ortholog) NW_004955492 7476866 7481186 + 102008633 AGCD01060798;GBCE01166882;XM_005404976 XP_005405033 MODEL 8786141 protein-coding Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); astrocyte fate commitment (ortholog); basophil differentiation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); lymphoid leukemia (ortholog); T-cell acute lymphoblastic leukemia (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955464 11304611 11317420 + 102030163 AGCD01050143;AGCD01050144;GBBH01209848;XM_013521747;XM_013521748;XM_013521749 XP_013377201;XP_013377202;XP_013377203 MODEL 8930534 protein-coding Tcf21 transcription factor 21 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); branchiomeric skeletal muscle development (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Paroxysmal Atrial Fibrillation (ortholog); ventricular septal defect (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) NW_004955439 2617562 2620613 - 102008261 AGCD01035655;GBCQ01062210;XM_005390510 XP_005390567 MODEL 9001965 protein-coding Gli4 GLI family zinc finger 4 ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955454 1996256 2004848 + 102022565 AGCD01044998;GBDI01207968;XM_013520033;XM_013520034;XM_013520035 XP_013375487;XP_013375488;XP_013375489 MODEL 9049670 protein-coding Xpnpep3 X-prolyl aminopeptidase 3 ENCODES a protein that exhibits aminopeptidase activity (ortholog); manganese ion binding (ortholog); metalloaminopeptidase activity (ortholog); INVOLVED IN glomerular filtration (ortholog); protein processing (ortholog); proteolysis (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955413 26507860 26564105 + 102012848 AGCD01014446;AGCD01014447;AGCD01014448;AGCD01014449;AGCD01014450;GBDF01158243;XM_005379329;XM_005379330;XM_005379334;XM_013511350;XM_013511351 XP_005379386;XP_005379387;XP_005379391;XP_013366804;XP_013366805 MODEL 8702178 ncrna LOC102003807 uncharacterized LOC102003807 NW_004955546 1036841 1042659 - 102003807 AGCD01072038;GBDF01208163;XR_264887 MODEL 9016936 protein-coding Dvl2 dishevelled segment polarity protein 2 ENCODES a protein that exhibits frizzled binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cochlea morphogenesis (ortholog); convergent extension involved in neural plate elongation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); dextro-looped transposition of the great arteries (ortholog); FOUND IN apical part of cell (ortholog); clathrin-coated vesicle (ortholog); cytoplasm (ortholog) NW_004955467 9675912 9683996 + 102027735 AGCD01051521;GBDF01125281;XM_005399545;XM_005399546 XP_005399602;XP_005399603 MODEL 8822557 protein-coding Slc8a2 solute carrier family 8 member A2 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); calcium:monoatomic cation antiporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration (ortholog); calcium:sodium antiporter activity (ortholog); INVOLVED IN calcium ion export across plasma membrane (ortholog); calcium ion import across plasma membrane (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); basolateral plasma membrane (ortholog) NW_004955574 1290907 1315399 - 102010647 AGCD01075172;AGCD01075173;GBDF01287717;GBDJ01063990;XM_005413871 XP_005413928 MODEL 39132631 snrna U6 U6 spliceosomal RNA 9028107 protein-coding Kiaa1143 KIAA1143 ortholog ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN intercellular bridge (ortholog); nucleoplasm (ortholog) NW_004955420 26827888 26831967 + 102007775 AGCD01021433;GBDF01187457;GBDF01187461;XM_005383472 XP_005383529 MODEL 8814664 protein-coding LOC102023119 granzyme B(G,H)-like NW_004955409 35492731 35496027 + 102023119 AGCD01010424;GBDK01074388;XM_005376991 XP_005377048 MODEL 39133018 snrna U6 U6 spliceosomal RNA 8876239 protein-coding LOC102005247 apolipoprotein L6-like NW_004955413 21930891 21954562 + 102005247 AGCD01014275;AGCD01014276;AGCD01014277;GBDJ01276595;XM_005379645 XP_005379702 MODEL 8732730 pseudo LOC102003479 tumor susceptibility gene 101 protein pseudogene NW_004955515 383004 383850 - 102003479 AGCD01067198;XR_264530 MODEL 8740920 protein-coding LOC102009376 olfactory receptor 13J1 NW_004955472 452846 454056 + 102009376 AGCD01053339;XM_005401175 XP_005401232 MODEL 8916529 protein-coding Il1rl2 interleukin 1 receptor like 2 INVOLVED IN cytokine-mediated signaling pathway (ortholog); inflammatory response (ortholog); positive regulation of interleukin-6 production (ortholog); ASSOCIATED WITH aortic dissection (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN signaling receptor complex (ortholog) NW_004955470 7703369 7742058 + 102030184 AGCD01052803;AGCD01052804;GBDI01346727;XM_013522820;XM_013522821;XM_013522822 XP_013378274;XP_013378275;XP_013378276 MODEL 39132770 snrna U6 U6 spliceosomal RNA 8904568 pseudo LOC102010545 COP9 signalosome complex subunit 8-like NW_004955406 37300353 37301399 - 102010545 AGCD01006573 MODEL 8907705 ncrna LOC102014129 uncharacterized LOC102014129 NW_004955469 10523201 10529646 + 102014129 AGCD01052536;GBDF01279244;XR_263448 MODEL 8962167 protein-coding Tnpo2 transportin 2 INVOLVED IN negative regulation of muscle cell differentiation (ortholog); protein import into nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955415 31807701 31826938 - 102019909 AGCD01016698;GBDJ01136647;XM_005381021;XM_013512350;XM_013512351;XM_013512352 XP_005381078;XP_013367804;XP_013367805;XP_013367806 MODEL 8888362 pseudo LOC102021363 olfactory receptor 7D4-like NW_004955495 413973 415050 + 102021363 AGCD01061628;XM_005406119 MODEL 8986326 pseudo LOC102016027 olfactory receptor 10C1-like NW_004955458 2404491 2405434 - 102016027 AGCD01047232 MODEL 8993993 protein-coding Slc23a2 solute carrier family 23 member 2 ENCODES a protein that exhibits L-ascorbate:sodium symporter activity (ortholog); L-ascorbic acid transmembrane transporter activity (ortholog); INVOLVED IN blood circulation (ortholog); cellular response to ethanol (ortholog); L-ascorbic acid metabolic process (ortholog); ASSOCIATED WITH Binge Drinking (ortholog); cervical cancer (ortholog); cholestasis (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955415 15565344 15677935 - 102009494 AGCD01016349;AGCD01016350;AGCD01016351;AGCD01016352;AGCD01016353;GBCE01023386;XM_005380822;XM_005380823 XP_005380879;XP_005380880 MODEL 8964897 pseudo LOC102010546 ras-related protein Rab-5A-like NW_004955455 241706 244246 - 102010546 AGCD01045555 MODEL 9019013 protein-coding Sv2c synaptic vesicle glycoprotein 2C INVOLVED IN negative regulation of excitatory postsynaptic potential (ortholog); regulation of synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH spinal muscular atrophy (ortholog); FOUND IN dopaminergic synapse (ortholog); nucleoplasm (ortholog); synaptic vesicle (ortholog) NW_004955425 24489304 24682555 - 102022203 AGCD01025889;AGCD01025890;AGCD01025891;AGCD01025892;GBDJ01307116;XM_005386041;XM_013514921 XP_005386098;XP_013370375 MODEL 8813809 protein-coding Rab22a RAB22A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN endocytosis (ortholog); endosomal transport (ortholog); endosome organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasmic vesicle (ortholog); early endosome (ortholog) NW_004955445 1167941 1224932 - 102021493 AGCD01039330;AGCD01039331;AGCD01039332;AGCD01039333;AGCD01039334;GBBH01076597;GBDK01284734;XM_013518261 XP_013373715 MODEL 8808390 protein-coding LOC102020261 uncharacterized LOC102020261 NW_004955423 1597231 1611521 - 102020261 AGCD01023443;GBDF01176402;XM_005385350 XP_005385407 MODEL 8785975 protein-coding Txndc12 thioredoxin domain containing 12 ENCODES a protein that exhibits protein-disulfide reductase (glutathione) activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955464 7070555 7094991 + 102022479 AGCD01050053;GBDF01177293;XM_005398592 XP_005398649 MODEL 9035323 protein-coding Sirt6 sirtuin 6 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); damaged DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cardiac muscle cell differentiation (ortholog); cellular response to angiotensin (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); Cardiotoxicity (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, subtelomeric region (ortholog) NW_004955495 4641883 4650518 + 102011999 AGCD01061938;GBDI01262314;XM_013505251;XM_013505252 XP_013360705;XP_013360706 MODEL 8962076 protein-coding Lin7c lin-7 cell polarity scaffold C ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); L27 domain binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN morphogenesis of an epithelial sheet (ortholog); neurotransmitter secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955476 6650539 6658811 - 102016379 AGCD01055339;GBDF01088577;XM_005401750 XP_005401807 MODEL 8816187 protein-coding Scml2 Scm polycomb group protein like 2 INVOLVED IN anatomical structure morphogenesis (ortholog); apoptotic process (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); PcG protein complex (ortholog) NW_004955519 16839 84226 + 102029780 AGCD01067854;GBDF01157400;XM_005409124;XM_005409125 XP_005409181;XP_005409182 MODEL 8909017 pseudo LOC102012961 reactive oxygen species modulator 1 pseudogene NW_004955479 10848845 10849614 + 102012961 AGCD01056562 MODEL 8852868 protein-coding Tspo translocator protein ENCODES a protein that exhibits androgen binding (ortholog); benzodiazepine receptor activity (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN adrenal gland development (ortholog); behavioral response to pain (ortholog); C21-steroid hormone biosynthetic process (ortholog); PARTICIPATES IN heme biosynthetic pathway; ASSOCIATED WITH cholesterol ester storage disease (ortholog); clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955413 28309105 28315075 + 102016254 AGCD01014556;GBDK01018713;XM_005379436;XM_005379437;XM_005379438 XP_005379493;XP_005379494;XP_005379495 MODEL 8972781 protein-coding Gtf3c6 general transcription factor IIIC subunit 6 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN transcription by RNA polymerase III (ortholog); transcription initiation at RNA polymerase III promoter (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955411 35609772 35619448 + 102025886 AGCD01012446;AGCD01012447;AGCD01012448;GBCQ01033703;GBCQ01033706;XM_013510831 XP_013366285 MODEL 8933937 pseudo LOC102004550 ubiquitin-like protein FUBI pseudogene NW_004955403 20036621 20037044 + 102004550 AGCD01002152 MODEL 8970579 protein-coding Lancl1 LanC like glutathione S-transferase 1 ENCODES a protein that exhibits glutathione binding (ortholog); glutathione transferase activity (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN cellular detoxification (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955457 5055774 5087570 + 102028058 AGCD01046806;GBDF01003643;GBDF01003644;XM_013520773 XP_013376227 MODEL 8744929 protein-coding Fibin fin bud initiation factor homolog ENCODES a protein that exhibits protein homodimerization activity (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955476 6325492 6327075 + 102014775 AGCD01055328;GBDK01432398;XM_005401745 XP_005401802 MODEL 9032962 protein-coding LOC102007872 olfactory receptor 2B6-like NW_004955465 13408100 13409973 - 102007872 AGCD01050608;XM_005398953 XP_005399010 MODEL 8722430 protein-coding Nrg1 neuregulin 1 ENCODES a protein that exhibits chemorepellent activity (ortholog); ErbB-2 class receptor binding (ortholog); ErbB-3 class receptor binding (ortholog); INVOLVED IN cardiac conduction system development (ortholog); cardiac muscle cell apoptotic process (ortholog); cardiac muscle cell differentiation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; glypican signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN apical part of cell; basal part of cell; cell projection NW_004955463 8009436 9037116 + 102004046 AGCD01049752;AGCD01049753;AGCD01049754;AGCD01049755;AGCD01049756;AGCD01049757;AGCD01049758;AGCD01049759;AGCD01049760;AGCD01049761;AGCD01049762;AGCD01049763;AGCD01049764;AGCD01049765;AGCD01049766;AGCD01049767;AGCD01049768;AGCD01049769;AGCD01049770;AGCD01049771;GBDK01157880;XM_005398392;XM_005398394;XM_005398395;XM_005398397;XM_005398399;XM_005398400;XM_013521518;XM_013521519;XM_013521520;XM_013521521;XM_013521522 XP_005398449;XP_005398451;XP_005398452;XP_005398454;XP_005398456;XP_005398457;XP_013376972;XP_013376973;XP_013376974;XP_013376975;XP_013376976 MODEL 8850879 protein-coding Samd3 sterile alpha motif domain containing 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955436 11017336 11074020 - 102016743 AGCD01033804;AGCD01033805;AGCD01033806;AGCD01033807;GBDF01114641;XM_005389195 XP_005389252 MODEL 8759902 ncrna LOC102017963 uncharacterized LOC102017963 NW_004955463 4854737 4856857 - 102017963 AGCD01049619;GBCQ01156510;XR_263147 MODEL 8855693 protein-coding Tcf23 transcription factor 23 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription regulator inhibitor activity (ortholog); INVOLVED IN decidualization (ortholog); negative regulation of muscle cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN euchromatin (ortholog) NW_004955469 9123987 9130728 + 102022487 AGCD01052491;GBDF01307222;XM_005400463;XM_005400464 XP_005400520;XP_005400521 MODEL 9004427 ncrna LOC102003811 uncharacterized LOC102003811 NW_004955442 15113086 15113646 + 102003811 AGCD01037859;GBBH01035320;XR_262150 MODEL 9026452 protein-coding Dmrt2 doublesex and mab-3 related transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN embryonic skeletal system development (ortholog); positive regulation of myotome development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH 46,XY complete gonadal dysgenesis (ortholog); amenorrhea (ortholog); Dwarfism (ortholog); FOUND IN nucleus (ortholog) NW_004955434 5528625 5535783 + 102008765 AGCD01032192;AGCD01032193;GBCE01077894;GBDF01176827;XM_013516376 XP_013371830 MODEL 9062298 protein-coding Smoc1 SPARC related modular calcium binding 1 ENCODES a protein that exhibits extracellular matrix binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); eye development (ortholog); limb development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN basement membrane (ortholog) NW_004955466 378277 528260 - 102013810 AGCD01050660;AGCD01050661;AGCD01050662;GBDI01264757;GBDJ01174419;XM_005399241;XM_013521998;XM_013521999 XP_005399298;XP_013377452;XP_013377453 MODEL 39132632 snrna U6 U6 spliceosomal RNA 8990424 protein-coding LOC102025276 olfactory receptor 4C15-like NW_004955511 248515 251927 + 102025276 AGCD01066325;XM_013506350 XP_013361804 MODEL 8922294 protein-coding Tff2 trefoil factor 2 ENCODES a protein that exhibits CXCR4 chemokine receptor binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); chemokine-mediated signaling pathway (ortholog); negative regulation of gastric acid secretion (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Helicobacter Infections (ortholog); Hookworm Infections (ortholog); FOUND IN extracellular region (ortholog) NW_004955407 39379669 39382367 + 102014980 AGCD01007825;GBDI01010717;XM_005375830 XP_005375887 MODEL 39132263 snrna U6 U6 spliceosomal RNA 8810341 protein-coding LOC102005250 olfactory receptor 51L1-like NW_004955414 21095282 21096259 - 102005250 AGCD01015407;XM_005380492 XP_005380549 MODEL 8940705 protein-coding LOC102009755 pre-mRNA-processing factor 6 NW_004955528 243869 278279 - 102009755 AGCD01069519;AGCD01069520;AGCD01069521;AGCD01069522;AGCD01069523;GBCQ01156965;XM_013507476;XM_013507477;XM_013507478;XM_013507479;XM_013507480;XM_013507481 XP_013362930;XP_013362931;XP_013362932;XP_013362933;XP_013362934;XP_013362935 MODEL 8966838 ncrna LOC102019181 uncharacterized LOC102019181 NW_004955422 2137150 2166560 + 102019181 AGCD01022480;AGCD01022481;GBDK01327229;XR_001234010;XR_001234011;XR_001234012 MODEL 9062225 protein-coding Glipr1 GLI pathogenesis related 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); nephroblastoma (ortholog) NW_004955405 14840731 14851111 + 102009571 AGCD01004933;GBCB01098958;XM_005374335 XP_005374392 MODEL 10327777 pseudo LOC106147326 60S ribosomal protein L21-like NW_004955543 844063 844544 - 106147326 AGCD01071602 MODEL 8781905 protein-coding Exog exo/endonuclease G ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); endonuclease activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Brugada syndrome (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) NW_004955427 25394019 25426930 - 102004733 AGCD01027539;AGCD01027540;GBBH01172707;XM_005386588 XP_005386645 MODEL 8868743 protein-coding Lrrk1 leucine rich repeat kinase 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN bone resorption (ortholog); osteoclast development (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955416 27860934 27988279 + 102009943 AGCD01017622;AGCD01017623;GBDI01187263;XM_013512546;XM_013512547 XP_013368000;XP_013368001 MODEL 8814696 protein-coding Tal2 TAL bHLH transcription factor 2 INVOLVED IN midbrain development (ortholog); multicellular organism growth (ortholog); post-embryonic development (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog) NW_004955419 20899292 20907288 - 102027073 AGCD01020257;GBDI01174310;XM_005382772;XM_005382773;XM_005382774;XM_005382775;XM_013513293 XP_005382829;XP_005382830;XP_005382831;XP_005382832;XP_013368747 MODEL 8912229 protein-coding Xpo1 exportin 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); nuclear export signal receptor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN cellular response to salt (ortholog); cellular response to triglyceride (ortholog); mRNA export from nucleus (ortholog); PARTICIPATES IN CRM1 export pathway; Hedgehog signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); atrial fibrillation (ortholog); FOUND IN annulate lamellae (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955424 22370006 22420568 + 102022407 AGCD01024966;AGCD01024967;GBDF01082052;XM_005385738;XM_005385739 XP_005385795;XP_005385796 MODEL 8748366 protein-coding Cwc25 CWC25 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955451 13867570 13884433 - 102019657 AGCD01043509;AGCD01043510;AGCD01043511;AGCD01043512;GBDJ01004357;XM_005394284 XP_005394341 MODEL 8713883 protein-coding Tnpo3 transportin 3 ENCODES a protein that exhibits identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN protein import into nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant limb-girdle muscular dystrophy type 2 (ortholog); cervical cancer (ortholog); FOUND IN annulate lamellae (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955479 9739927 9831276 - 102007011 AGCD01056494;AGCD01056495;AGCD01056496;AGCD01056497;GBDK01146655;XM_005402403;XM_005402405 XP_005402460;XP_005402462 MODEL 39133637 snrna U4 U4 spliceosomal RNA 8997832 protein-coding Dvl3 dishevelled segment polarity protein 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); frizzled binding (ortholog); protease binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cochlea morphogenesis (ortholog); heart morphogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); autosomal dominant Robinow syndrome 2 (ortholog); autosomal dominant Robinow syndrome 3 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955420 23291650 23301695 - 102030085 AGCD01021240;AGCD01021241;GBDI01077356;GBDK01277196;XM_013513361 XP_013368815 MODEL 8992604 protein-coding Svbp small vasohibin binding protein ENCODES a protein that exhibits microtubule binding (ortholog); peptidase activator activity (ortholog); INVOLVED IN axon development (ortholog); brain development (ortholog); negative regulation of endothelial cell migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955537 2333657 2337012 - 102016517 AGCD01070924;GBCE01074353;GBDF01044148;XM_005410622 XP_005410679 MODEL 8751688 protein-coding Kiaa1191 KIAA1191 ortholog ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955408 28631523 28645882 - 102008702 AGCD01008721;GBDJ01006796;XM_005376368;XM_005376369;XM_005376370;XM_013509541;XM_013509546 XP_005376425;XP_005376426;XP_005376427;XP_013364995;XP_013365000 MODEL 39133019 snrna U6 U6 spliceosomal RNA 8712262 protein-coding LOC102023128 cytochrome c oxidase assembly protein COX16 homolog, mitochondrial INVOLVED IN mitochondrial respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 22 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955466 130341 142969 + 102023128 AGCD01050650;AGCD01050651;GBCQ01038746;XM_005399020 XP_005399077 MODEL 8726903 protein-coding LOC102020262 olfactory receptor 10T2-like NW_004955495 8104546 8109731 + 102020262 AGCD01062183;AGCD01062184;XM_013505150 XP_013360604 MODEL 9026560 protein-coding LOC102018772 keratin, type II cytoskeletal 6C-like NW_004955547 2822399 2871054 - 102018772 AGCD01072294;AGCD01072295;AGCD01072296;AGCD01072297;AGCD01072298;AGCD01072299;GBDI01355999;XM_013508446 XP_013363900 MODEL 8736685 pseudo LOC102003482 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 pseudogene NW_004955535 3151906 3152089 + 102003482 AGCD01070687 MODEL 9042453 protein-coding Gcm1 GCM transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN astrocyte fate commitment (ortholog); branching involved in labyrinthine layer morphogenesis (ortholog); cell differentiation involved in embryonic placenta development (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); melanoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955411 2872758 2917154 + 102011634 AGCD01011521;AGCD01011522;AGCD01011523;AGCD01011524;GBDF01057346;XM_005377607;XM_005377608;XM_005377609 XP_005377664;XP_005377665;XP_005377666 MODEL 8818995 ncrna LOC102022063 uncharacterized LOC102022063 NW_004955466 4134667 4136679 - 102022063 AGCD01050819;AGCD01050820;GBDF01115192;XR_263288 MODEL 39132771 snrna U6 U6 spliceosomal RNA 8880640 ncrna LOC102012964 uncharacterized LOC102012964 NW_004955418 2720066 2727457 + 102012964 AGCD01018774;GBDF01250695;XR_001233484;XR_001233485 MODEL 8998018 protein-coding LOC102014132 vomeronasal type-1 receptor 90-like NW_004955414 15099427 15100413 - 102014132 AGCD01015176;XM_005380445 XP_005380502 MODEL 8763134 protein-coding Il1rn interleukin 1 receptor antagonist ENCODES a protein that exhibits interleukin-1 receptor antagonist activity (ortholog); interleukin-1 receptor binding (ortholog); interleukin-1 type I receptor antagonist activity (ortholog); INVOLVED IN acute-phase response (ortholog); carboxylic acid metabolic process (ortholog); cellular response to norepinephrine stimulus (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH Abscess (ortholog); acute kidney failure (ortholog); Acute Liver Failure (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); vesicle (ortholog) NW_004955470 1145022 1159413 - 102020903 AGCD01052627;GBDJ01263056;XM_005400584;XM_005400585;XM_005400586;XM_013522846 XP_005400641;XP_005400642;XP_005400643;XP_013378300 MODEL 8990640 pseudo LOC102004551 small nuclear ribonucleoprotein-associated protein B pseudogene NW_004955451 1697358 1700887 - 102004551 AGCD01042977;AGCD01042978 MODEL 8819354 protein-coding Tspo2 translocator protein 2 ENCODES a protein that exhibits 5-aminolevulinic acid transmembrane transporter activity (ortholog); cholesterol binding (ortholog); INVOLVED IN 5-aminolevulinic acid import across plasma membrane (ortholog); enucleate erythrocyte differentiation (ortholog); import across plasma membrane (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); lymphoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955437 7714107 7715796 + 102005506 AGCD01034465;GBBH01126606;XM_005389665;XM_005389666 XP_005389722;XP_005389723 MODEL 8803637 protein-coding LOC102016028 phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like NW_004955409 22116214 22117258 - 102016028 AGCD01010017;GBDF01002616;XM_005376887 XP_005376944 MODEL 8985441 protein-coding LOC102012606 dual specificity protein phosphatase 18-like NW_004955453 12279178 12280813 + 102012606 AGCD01044830;XM_013519757 XP_013375211 MODEL 9034902 protein-coding Slc23a3 solute carrier family 23 member 3 INVOLVED IN hypoxanthine transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebrotendinous xanthomatosis (ortholog); cervical cancer (ortholog) NW_004955453 14271343 14278233 + 102022157 AGCD01044861;GBCQ01068748;XM_005395589;XM_005395590 XP_005395646;XP_005395647 MODEL 8932546 protein-coding Slc8a3 solute carrier family 8 member A3 ENCODES a protein that exhibits calcium:monoatomic cation antiporter activity (ortholog); calcium:monoatomic cation antiporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration (ortholog); calcium:sodium antiporter activity (ortholog); INVOLVED IN calcium ion export across plasma membrane (ortholog); calcium ion import across plasma membrane (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); brain ischemia (ortholog); FOUND IN anchoring junction (ortholog); axon (ortholog); axon terminus (ortholog) NW_004955466 220346 359627 + 102023887 AGCD01050656;AGCD01050657;AGCD01050658;AGCD01050659;GBCB01020048;XM_005399022;XM_005399024;XM_005399025;XM_005399027;XM_013522004 XP_005399079;XP_005399081;XP_005399082;XP_005399084;XP_013377458 MODEL 8880610 protein-coding LOC102010548 keratin-associated protein 20-2-like NW_004955407 30234861 30239217 - 102010548 AGCD01007628;AGCD01007629;XM_005375651;XM_013506303 XP_005375708;XP_013361757 MODEL 10190579 protein-coding LOC106147327 PDZ domain-containing protein MAGIX-like NW_004955543 644921 652487 - 106147327 AGCD01071596;GBDK01285488;XM_013508150;XM_013508151 XP_013363604;XP_013363605 MODEL 9041456 protein-coding Rab23 RAB23, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular defense response (ortholog); cilium assembly (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); arthrogryposis multiplex congenita (ortholog); atrial heart septal defect (ortholog); FOUND IN autophagosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955502 2947170 2980634 + 102026236 AGCD01064306;AGCD01064307;GBBH01102042;XM_005406882 XP_005406939 MODEL 8974637 protein-coding Bok BCL2 family apoptosis regulator BOK ENCODES a protein that exhibits BH domain binding (ortholog); protein dimerization activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular component disassembly involved in execution phase of apoptosis (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); hydrocephalus (ortholog); FOUND IN cis-Golgi network membrane (ortholog); cytoplasm (ortholog); early endosome membrane (ortholog) NW_004955542 224471 232401 - 102007278 AGCD01071464;GBCQ01010517;GBDI01072356;XM_005411124 XP_005411181 MODEL 8779886 protein-coding Dmrt3 doublesex and mab-3 related transcription factor 3 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN adult walking behavior (ortholog); male sex differentiation (ortholog); regulation of odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955434 5455449 5470343 + 102008450 AGCD01032190;GBBH01113534;XM_013516294 XP_013371748 MODEL 8821895 protein-coding Xpo4 exportin 4 ENCODES a protein that exhibits nuclear export signal receptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN positive regulation of protein export from nucleus (ortholog); protein export from nucleus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955497 1562945 1661379 - 102012451 AGCD01062465;AGCD01062466;GBDJ01386012;XM_005406312;XM_005406313;XM_013505464 XP_005406369;XP_005406370;XP_013360918 MODEL 8717564 protein-coding Sirt7 sirtuin 7 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K18 deacetylase activity, NAD-dependent (ortholog); NAD-dependent protein lysine deacetylase activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair-dependent chromatin remodeling (ortholog); homologous chromosome pairing at meiosis (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase I transcription pathway; Sirtuin mediated pathway; ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955506 1252271 1258728 + 102021374 AGCD01065252;GBDF01192905;XM_005407236;XM_005407237;XM_005407238;XM_005407239;XM_005407240;XM_013506059;XM_013506060 XP_005407293;XP_005407294;XP_005407295;XP_005407296;XP_005407297;XP_013361513;XP_013361514 MODEL 8811919 ncrna LOC102009377 uncharacterized LOC102009377 NW_004955474 7388629 7400816 + 102009377 AGCD01054519;GBDF01303398;XR_001230720;XR_263601 MODEL 8818567 protein-coding Scml4 Scm polycomb group protein like 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955411 32940367 33036779 - 102009810 AGCD01012340;AGCD01012341;AGCD01012342;GBDK01071981;XM_005377840;XM_013510901;XM_013510902 XP_005377897;XP_013366355;XP_013366356 MODEL 8802901 protein-coding Lin9 lin-9 DREAM MuvB core complex component ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955489 431063 491729 - 102010701 AGCD01059804;AGCD01059805;AGCD01059806;GBDK01263599;XM_005404493;XM_013504504;XM_013504505 XP_005404550;XP_013359958;XP_013359959 MODEL 39132265 snrna U6 U6 spliceosomal RNA 40834590 protein-coding GTF3C6 general transcription factor IIIC subunit 6 8996816 protein-coding Fibp FGF1 intracellular binding protein ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN platelet aggregation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); genetic disease (ortholog); FOUND IN membrane (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955422 19435528 19440095 + 102025589 AGCD01023006;GBDF01048191;XM_005384449;XM_005384450;XM_005384451 XP_005384506;XP_005384507;XP_005384508 MODEL 8882147 pseudo LOC102019186 zinc finger protein 280D pseudogene NW_004955501 4636880 4667130 + 102019186 AGCD01064133;AGCD01064134;AGCD01064135;AGCD01064136 MODEL 8820537 protein-coding LOC102017970 zinc finger protein 624 NW_004955467 1957286 2017814 - 102017970 AGCD01051298;AGCD01051299;GBDI01212656;XM_005399322 XP_005399379 MODEL 8813137 protein-coding Nrg2 neuregulin 2 ENCODES a protein that exhibits epidermal growth factor receptor activity (ortholog); epidermal growth factor receptor binding (ortholog); ErbB-3 class receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); ERBB2-ERBB3 signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955418 548624 793861 + 102023361 AGCD01018680;AGCD01018681;AGCD01018682;AGCD01018683;AGCD01018684;AGCD01018685;AGCD01018686;AGCD01018687;AGCD01018688;AGCD01018689;AGCD01018690;AGCD01018691;GBDF01000028;GBDF01158810;XM_013512931 XP_013368385 MODEL 39131337 protein-coding TCF24 transcription factor 24 9003796 protein-coding Txndc15 thioredoxin domain containing 15 INVOLVED IN cilium assembly (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); genetic disease (ortholog); FOUND IN cilium (ortholog) NW_004955408 30067455 30087095 + 102007516 AGCD01008794;AGCD01008795;GBDK01192967;XM_005376469 XP_005376526 MODEL 39133638 snrna U4 U4 spliceosomal RNA 8714532 protein-coding Dxo decapping exoribonuclease ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); magnesium ion binding (ortholog); mRNA 5'-diphosphatase activity (ortholog); INVOLVED IN mRNA catabolic process (ortholog); NAD-cap decapping (ortholog); nuclear mRNA surveillance (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955437 482866 484989 - 102007366 AGCD01034137;GBBH01005656;XM_005389406 XP_005389463 MODEL 39133020 snrna U6 U6 spliceosomal RNA 8839260 ncrna LOC102023133 uncharacterized LOC102023133 NW_004955467 9636220 9637414 + 102023133 AGCD01051520;GBCB01098743;XR_263355 MODEL 8843964 protein-coding Svep1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); integrin binding (ortholog); integrin binding involved in cell-matrix adhesion (ortholog); INVOLVED IN epidermis development (ortholog); gene expression (ortholog); lymph circulation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); membrane (ortholog) NW_004955419 16589811 16773425 + 102015013 AGCD01020119;AGCD01020120;AGCD01020121;AGCD01020122;AGCD01020123;AGCD01020124;GBCE01076180;XM_005382738 XP_005382795 MODEL 9004868 protein-coding Tff3 trefoil factor 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of glucose metabolic process (ortholog); response to peptide hormone (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; interleukin-4 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Animal Hepatitis (ortholog); colon cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); secretory granule (ortholog) NW_004955407 39398534 39401085 + 102015285 AGCD01007825;GBDF01114936;XM_005375831 XP_005375888 MODEL 9064255 ncrna LOC102005254 uncharacterized LOC102005254 NW_004955417 12247480 12249907 + 102005254 AGCD01018159;GBDF01276663;XR_260475 MODEL 8890008 protein-coding LOC102021365 histone H2A.Z ENCODES a protein that exhibits chromatin DNA binding (ortholog); nucleosomal DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to insulin stimulus (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN Barr body (ortholog); chromosome (ortholog); euchromatin (ortholog) NW_004955496 7733910 7735525 + 102021365 AGCD01062383;AGCD01062384;GBDF01006515;XM_005406261;XM_005406262 XP_005406318;XP_005406319 MODEL 8863892 pseudo LOC102007875 AP-3 complex subunit sigma-1 pseudogene NW_004955412 13389131 13390789 - 102007875 AGCD01012835 MODEL 8762834 ncrna LOC102009756 uncharacterized LOC102009756 NW_004955437 596440 600236 + 102009756 AGCD01034150;AGCD01034151;GBDF01305486;XR_261820 MODEL 9011802 protein-coding Il2 interleukin 2 ENCODES a protein that exhibits carbohydrate binding (ortholog); cytokine activity (ortholog); glycosphingolipid binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); extrinsic apoptotic signaling pathway in absence of ligand (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Acute Lung Injury (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN extracellular region (ortholog); interleukin-2 receptor complex (ortholog) NW_004955428 18163010 18168157 + 102015133 AGCD01028056;AGCD01028057;GBBH01190198;XM_005386770 XP_005386827 MODEL 8942715 protein-coding Exosc1 exosome component 1 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN RNA catabolic process (ortholog); RNA processing (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); exosome (RNase complex) (ortholog); nucleolus (ortholog) NW_004955507 3576555 3583183 - 102024828 AGCD01065631;GBDJ01181029;XM_005407601 XP_005407658 MODEL 8735913 protein-coding Gtpbp1 GTP binding protein 1 ENCODES a protein that exhibits alpha-aminoacyl-tRNA binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN cytoplasmic translation (ortholog); GTP metabolic process (ortholog); positive regulation of mRNA catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic exosome (RNase complex) (ortholog); cytosol (ortholog) NW_004955413 24823113 24849522 + 102023248 AGCD01014381;AGCD01014382;AGCD01014383;GBDF01052404;XM_005379270 XP_005379327 MODEL 9015211 pseudo LOC102016030 cyclin-Y-like protein 1 NW_004955460 81107 101125 - 102016030 AGCD01048333 MODEL 8732503 protein-coding Cwc27 CWC27 spliceosome associated cyclophilin ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955446 4032493 4230444 - 102022030 AGCD01040031;AGCD01040032;AGCD01040033;AGCD01040034;GBDI01292969;XM_005392634;XM_013518444 XP_005392691;XP_013373898 MODEL 9052141 protein-coding Tnr tenascin R ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN associative learning (ortholog); extracellular matrix organization (ortholog); locomotory exploration behavior (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); genetic disease (ortholog); Gliosis (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); glutamatergic synapse (ortholog) NW_004955406 15007248 15512219 - 102015803 AGCD01005975;AGCD01005976;AGCD01005977;AGCD01005978;AGCD01005979;AGCD01005980;AGCD01005981;GBDI01106197;XM_013520943;XR_001236463;XR_001236464 XP_013376397 MODEL 10361912 protein-coding LOC106147328 endogenous retrovirus group K member 24 Gag polyprotein-like NW_004955543 55855 58418 - 106147328 AGCD01071555;GBDK01060559;XM_013508160 XP_013363614 MODEL 8786245 protein-coding Smoc2 SPARC related modular calcium binding 2 ENCODES a protein that exhibits calcium ion binding (ortholog); glycosaminoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN basement membrane (ortholog); cell periphery (ortholog); extracellular matrix (ortholog) NW_004955411 4729753 4822140 - 102010981 AGCD01011588;GBCE01004050;XM_005377922 XP_005377979 MODEL 9037805 pseudo LOC102018774 epidermal growth factor receptor substrate 15-like NW_004955550 90761 93344 - 102018774 AGCD01072481 MODEL 8736602 protein-coding Bola1 bolA family member 1 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN iron-sulfur cluster assembly complex (ortholog); mitochondrion (ortholog) NW_004955413 850781 851887 - 102022579 AGCD01013491;GBCE01167501;XM_005378710 XP_005378767 MODEL 8952952 protein-coding Dmrta1 DMRT like family A1 ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN male mating behavior (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955472 11923796 11925127 - 102020002 AGCD01053777;GBDI01136394;XM_013523045 XP_013378499 MODEL 8815011 pseudo LOC102009380 40S ribosomal protein S8 pseudogene NW_004955415 27385133 27385744 + 102009380 AGCD01016630 MODEL 41410893 protein-coding LINC00672 long intergenic non-protein coding RNA 672 39132266 snrna U6 U6 spliceosomal RNA 8894356 protein-coding LOC102022067 putative olfactory receptor 10D4 NW_004955412 24714814 24715746 + 102022067 AGCD01013123;XM_005378635 XP_005378692 MODEL 8969156 protein-coding Scn10a sodium voltage-gated channel alpha subunit 10 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN AV node cell action potential (ortholog); behavioral response to pain (ortholog); bundle of His cell action potential (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH asthma (ortholog); atrial fibrillation (ortholog); autistic disorder (ortholog); FOUND IN axon (ortholog); C-fiber (ortholog); clathrin complex (ortholog) NW_004955427 25157179 25244020 + 102029206 AGCD01027535;AGCD01027536;AGCD01027537;GBDF01255242;XM_005386574;XM_005386575;XM_005386576;XM_005386577;XM_013515027 XP_005386631;XP_005386632;XP_005386633;XP_005386634;XP_013370481 MODEL 39132772 snrna U6 U6 spliceosomal RNA 8972209 protein-coding Glipr1l1 GLIPR1 like 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); protein localization involved in acrosome reaction (ortholog); FOUND IN acrosomal vesicle (ortholog); extracellular region (ortholog); membrane raft (ortholog) NW_004955405 14710789 14755709 + 102007500 AGCD01004932;AGCD01004933;GBDF01047635;XM_005374327;XM_005374328 XP_005374384;XP_005374385 MODEL 8789680 pseudo LOC102003813 small nuclear ribonucleoprotein Sm D2 pseudogene NW_004955561 1082911 1083548 - 102003813 AGCD01073830 MODEL 8825728 protein-coding Taldo1 transaldolase 1 ENCODES a protein that exhibits carbohydrate binding (ortholog); identical protein binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN fructose 6-phosphate metabolic process (ortholog); glyceraldehyde-3-phosphate metabolic process (ortholog); pentose-phosphate shunt (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - non-oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); carbohydrate metabolic disorder (ortholog); cataract (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955476 11356601 11364573 - 102011536 AGCD01055453;AGCD01055454;GBDI01015937;XM_005401818;XM_013502979 XP_005401875;XP_013358433 MODEL 8778824 protein-coding Lrrk2 leucine rich repeat kinase 2 ENCODES a protein that exhibits actin binding (ortholog); beta-catenin destruction complex binding (ortholog); clathrin binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to curcumin (ortholog); cellular response to dopamine (ortholog); PARTICIPATES IN Parkinson's disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN amphisome (ortholog); autolysosome (ortholog); axon (ortholog) NW_004955505 84324 216923 - 102028660 AGCD01064948;AGCD01064949;AGCD01064950;GBBH01075475;GBDK01182204;XM_013505951 XP_013361405 MODEL 8888258 pseudo LOC102017979 NAD-dependent malic enzyme, mitochondrial pseudogene NW_004955475 5686616 5688181 + 102017979 AGCD01054925 MODEL 8872046 protein-coding Slc24a1 solute carrier family 24 member 1 ENCODES a protein that exhibits calcium, potassium:sodium antiporter activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); intracellular calcium ion homeostasis (ortholog); potassium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; visual phototransduction pathway; ASSOCIATED WITH Cerebral Hemorrhage (ortholog); congenital stationary night blindness (ortholog); congenital stationary night blindness 1D (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); rod photoreceptor outer segment (ortholog) NW_004955450 9850170 9881172 - 102005093 AGCD01042600;GBBH01101110;XM_005393714;XM_005393715;XM_005393716;XM_013518968;XM_013518969 XP_005393771;XP_005393772;XP_005393773;XP_013374422;XP_013374423 MODEL 8933251 protein-coding Kiaa1210 KIAA1210 ortholog ASSOCIATED WITH asthma (ortholog); cerebral palsy (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); basal ectoplasmic specialization (ortholog) NW_004955534 815636 873969 + 102013758 AGCD01070472;AGCD01070473;AGCD01070474;AGCD01070475;AGCD01070476;GBDF01154450;XM_005410451;XM_013507699;XM_013507700 XP_005410508;XP_013363153;XP_013363154 MODEL 8716687 protein-coding LOC102010566 olfactory receptor 151-like NW_004955412 25630768 25631700 + 102010566 AGCD01013166;XM_005378428 XP_005378485 MODEL 8857232 ncrna LOC102025278 uncharacterized LOC102025278 NW_004955513 3497931 3501438 - 102025278 AGCD01066906;GBDF01195803;XR_264468 MODEL 8787980 protein-coding Slc8b1 solute carrier family 8 member B1 ENCODES a protein that exhibits calcium:sodium antiporter activity (ortholog); calcium:sodium antiporter activity involved in regulation of cardiac muscle cell membrane potential (ortholog); identical protein binding (ortholog); INVOLVED IN calcium export from the mitochondrion (ortholog); calcium ion transmembrane transport (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Cerebral Hemorrhage (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955482 9594872 9617136 - 102017019 AGCD01057574;GBBH01102174;XM_013503592;XM_013503593;XM_013503594 XP_013359046;XP_013359047;XP_013359048 MODEL 8726571 pseudo LOC102003484 RNA-binding protein 25 pseudogene NW_004955437 14612893 14618799 - 102003484 AGCD01034678 MODEL 8719523 protein-coding Rab24 RAB24, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); autophagy (ortholog); meiotic nuclear division (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); clear cell renal cell carcinoma (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN autophagosome (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) NW_004955408 29548839 29551184 - 102023117 AGCD01008762;GBCB01023942;XM_005376424 XP_005376481 MODEL 8845608 protein-coding Txndc16 thioredoxin domain containing 16 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); extracellular region (ortholog) NW_004955409 10593693 10680381 + 102010233 AGCD01009478;AGCD01009479;AGCD01009480;AGCD01009481;GBCQ01000790;GBCQ01094913;XM_005376781;XM_013510324 XP_005376838;XP_013365778 MODEL 8952402 protein-coding LOC102020263 complement C1q and tumor necrosis factor-related protein 9 NW_004955497 4205700 4224087 - 102020263 AGCD01062569;GBBH01119189;XM_005406320;XM_005406321;XM_005406323;XM_013505469;XM_013505470;XM_013505471;XM_013505472;XM_013505473;XM_013505474;XM_013505475;XM_013505476;XM_013505477;XM_013505478;XM_013505479 XP_005406377;XP_005406378;XP_005406380;XP_013360923;XP_013360924;XP_013360925;XP_013360926;XP_013360927;XP_013360928;XP_013360929;XP_013360930;XP_013360931;XP_013360932;XP_013360933 MODEL 8752979 protein-coding LOC102012965 uncharacterized LOC102012965 NW_004955481 9182564 9207329 + 102012965 AGCD01057096;AGCD01057097;GBDF01015936;XM_005402931 XP_005402988 MODEL 9031508 protein-coding Dydc1 DPY30 domain containing 1 ASSOCIATED WITH melanoma (ortholog); FOUND IN radial spoke (ortholog) NW_004955510 319535 337268 - 102027211 AGCD01066145;GBDF01043580;XM_005407870 XP_005407927 MODEL 8894735 pseudo LOC102014133 lysocardiolipin acyltransferase 1 pseudogene NW_004955472 3041379 3042600 - 102014133 AGCD01053499 MODEL 9059923 pseudo LOC102004556 chromatin target of PRMT1 protein pseudogene NW_004955454 5724497 5725303 + 102004556 AGCD01045185 MODEL 8757250 protein-coding Samd4a sterile alpha motif domain containing 4A ENCODES a protein that exhibits translation repressor activity (ortholog); INVOLVED IN positive regulation of translation (ortholog); regulation of postsynapse assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955409 8716432 8916398 - 102029594 AGCD01009424;AGCD01009425;GBCB01020589;XM_005376760 XP_005376817 MODEL 8767672 ncrna LOC102007879 uncharacterized LOC102007879 NW_004955413 30303353 30306413 - 102007879 AGCD01014605;GBDJ01200944;XR_260137 MODEL 8833033 protein-coding LOC102012609 ras-related protein Rap-1A NW_004955407 658498 659795 + 102012609 AGCD01006756;XM_005375497 XP_005375554 MODEL 8938336 protein-coding LOC102019190 nascent polypeptide-associated complex subunit alpha, muscle-specific form-like NW_004955510 397595 407996 - 102019190 AGCD01066147;AGCD01066148;XM_013506307 XP_013361761 MODEL 8915093 protein-coding Lancl2 LanC like glutathione S-transferase 2 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of abscisic acid-activated signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955456 204434 250143 - 102022358 AGCD01046201;AGCD01046202;GBBH01188059;GBDF01001312;XM_013520628 XP_013376082 MODEL 8733562 protein-coding LOC102009757 ubiquinol-cytochrome-c reductase complex assembly factor 2 INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); positive regulation of mitochondrial translation (ortholog); regulation of insulin secretion (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 7 (ortholog); FOUND IN Cbp3p-Cbp6 complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955437 2107475 2119892 - 102009757 AGCD01034260;GBDF01065831;XM_005389507 XP_005389564 MODEL 39132633 snrna U6 U6 spliceosomal RNA 8958550 protein-coding Tcf24 transcription factor 24 ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955444 12305496 12318230 + 102013352 AGCD01039067;AGCD01039068;GBDF01007071;XM_013518148 XP_013373602 MODEL 8969656 protein-coding Nrg3 neuregulin 3 ENCODES a protein that exhibits chemorepellent activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN chemorepulsion involved in interneuron migration from the subpallium to the cortex (ortholog); ERBB4 signaling pathway (ortholog); ERBB4-ERBB4 signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Hirschsprung's disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) NW_004955510 1615316 2620031 + 102019829 AGCD01066202;AGCD01066203;AGCD01066204;AGCD01066205;AGCD01066206;AGCD01066207;AGCD01066208;AGCD01066209;AGCD01066210;AGCD01066211;AGCD01066212;AGCD01066213;GBDF01205703;XM_013506309 XP_013361763 MODEL 8880698 pseudo LOC102016033 nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 pseudogene NW_004955464 11739354 11741775 + 102016033 AGCD01050161 MODEL 8995972 protein-coding Gcm2 GCM transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell differentiation (ortholog); intracellular calcium ion homeostasis (ortholog); intracellular phosphate ion homeostasis (ortholog); ASSOCIATED WITH familial isolated hypoparathyroidism (ortholog); familial isolated hypoparathyroidism 1 (ortholog); familial isolated hypoparathyroidism 2 (ortholog); FOUND IN nucleus (ortholog) NW_004955465 3523029 3530342 + 102019373 AGCD01050381;GBDI01283548;XM_005398830 XP_005398887 MODEL 8773472 protein-coding Sit1 signaling threshold regulating transmembrane adaptor 1 ENCODES a protein that exhibits kinase binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN regulation of T cell activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955472 643923 645802 + 102010991 AGCD01053344;AGCD01053345;GBBH01063625;GBCE01055336;XM_005401179 XP_005401236 MODEL 39133021 snrna U6 U6 spliceosomal RNA 9030734 ncrna LOC102023135 uncharacterized LOC102023135 NW_004955413 10767169 10776931 + 102023135 AGCD01013937;GBDF01016432;XR_260075 MODEL 8886290 ncrna LOC102005256 uncharacterized LOC102005256 NW_004955481 2964634 3031561 - 102005256 AGCD01056891;GBDF01045486;XR_001230937;XR_263772 MODEL 8942660 pseudo LOC102021368 ferritin light chain pseudogene NW_004955500 1650018 1650857 + 102021368 AGCD01063669 MODEL 8827441 protein-coding Svil supervillin ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN muscle cell differentiation (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); cell periphery (ortholog); costamere (ortholog) NW_004955429 22339739 22465471 + 102022315 AGCD01029025;AGCD01029026;AGCD01029027;AGCD01029028;GBBH01090392;XM_005387196;XM_005387198;XM_005387200;XM_013515379;XM_013515380;XM_013515381;XM_013515382;XM_013515383;XM_013515384;XM_013515385;XM_013515386;XM_013515387;XM_013515388 XP_005387253;XP_005387255;XP_005387257;XP_013370833;XP_013370834;XP_013370835;XP_013370836;XP_013370837;XP_013370838;XP_013370839;XP_013370840;XP_013370841;XP_013370842 MODEL 39132270 snrna U6 U6 spliceosomal RNA 8996270 ncrna LOC102003814 uncharacterized LOC102003814 NW_004955444 9445917 9463729 - 102003814 AGCD01038970;GBDF01128007;XR_262253;XR_262254 MODEL 8845578 protein-coding Glipr1l2 GLIPR1 like 2 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955405 14761839 14796335 + 102009008 AGCD01004933;GBDF01224215;XM_005374333 XP_005374390 MODEL 8776970 protein-coding Il20 interleukin 20 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-20 receptor binding (ortholog); interleukin-22 receptor binding (ortholog); INVOLVED IN positive regulation of osteoclast differentiation (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); cervical cancer (ortholog); end stage renal disease (ortholog); FOUND IN extracellular region (ortholog); interleukin-20 receptor complex (ortholog) NW_004955406 42398510 42401561 + 102008495 AGCD01006706;XM_005375485 XP_005375542 MODEL 39133639 snrna U4 U4 spliceosomal RNA 8732988 protein-coding Xpo5 exportin 5 ENCODES a protein that exhibits mRNA binding (ortholog); nuclear export signal receptor activity (ortholog); pre-miRNA binding (ortholog); INVOLVED IN pre-miRNA export from nucleus (ortholog); protein export from nucleus (ortholog); PARTICIPATES IN microRNA pathway; ribosome biogenesis pathway; ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955437 9351045 9392396 - 102011478 AGCD01034527;AGCD01034528;GBDF01048032;XM_005389780;XM_013516820;XM_013516821 XP_005389837;XP_013372274;XP_013372275 MODEL 8763983 protein-coding Lrrn1 leucine rich repeat neuronal 1 INVOLVED IN positive regulation of synapse assembly (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); stomach cancer (ortholog) NW_004955421 9519468 9558038 - 102020922 AGCD01021850;AGCD01021851;GBDJ01307945;XM_005383746 XP_005383803 MODEL 9042228 protein-coding Tnrc18 trinucleotide repeat containing 18 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); histone H3K9me2/3 reader activity (ortholog); INVOLVED IN protein localization to chromatin (ortholog); transposable element silencing by heterochromatin formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytosol (ortholog) NW_004955460 10183836 10270626 - 102028832 AGCD01048575;AGCD01048576;GBBH01088705;GBDI01074607;XM_013521119;XM_013521120;XM_013521121;XM_013521122;XM_013521123;XM_013521124;XM_013521125 XP_013376573;XP_013376574;XP_013376575;XP_013376576;XP_013376577;XP_013376578;XP_013376579 MODEL 8768030 protein-coding Gtpbp10 GTP binding protein 10 NW_004955432 7600128 7625230 + 102022005 AGCD01030852;AGCD01030853;GBDF01160150;XM_005387991 XP_005388048 MODEL 8756219 ncrna LOC102010568 uncharacterized LOC102010568 NW_004955413 250256 256400 + 102010568 AGCD01013452;AGCD01013453;GBDF01303978;XR_260042 MODEL 8787441 protein-coding Slc24a2 solute carrier family 24 member 2 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium, potassium:sodium antiporter activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion import across plasma membrane (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; visual phototransduction pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cone photoreceptor outer segment (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955434 21871319 22091125 - 102028225 AGCD01032658;AGCD01032659;AGCD01032660;GBCB01100094;GBCQ01087320;XM_013516390 XP_013371844 MODEL 8933336 protein-coding LOC102018778 tubulin alpha-3 chain NW_004955442 19231448 19233877 - 102018778 AGCD01038042;AGCD01038043;GBBH01211441;XM_005391874 XP_005391931 MODEL 8739858 protein-coding LOC102003491 U3 small nucleolar RNA-associated protein 14 homolog A-like NW_004955546 975313 987398 + 102003491 AGCD01072034;GBBH01046731;XM_005411756 XP_005411813 MODEL 8859754 protein-coding Tfg trafficking from ER to golgi regulator ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Charcot-Marie-Tooth disease type 2 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog) NW_004955427 2328676 2362050 + 102023936 AGCD01026895;AGCD01026896;AGCD01026897;GBBH01060487;GBDF01082468;XM_005386305 XP_005386362 MODEL 8726326 protein-coding Bola2b bolA family member 2B INVOLVED IN [2Fe-2S] cluster assembly (ortholog); cell redox homeostasis (ortholog); intracellular iron ion homeostasis (ortholog); FOUND IN cytoplasm (ortholog); iron-sulfur cluster assembly complex (ortholog); nucleus (ortholog) NW_004955493 6812208 6812932 + 102020575 AGCD01061141;GBDF01002632;XM_005405183 XP_005405240 MODEL 8709027 protein-coding Smox spermine oxidase ENCODES a protein that exhibits polyamine oxidase activity (ortholog); spermine oxidase activity (ortholog); INVOLVED IN polyamine catabolic process (ortholog); spermine catabolic process (ortholog); PARTICIPATES IN polyamine metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); middle cerebral artery infarction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) NW_004955415 14937438 14971874 + 102005704 AGCD01016319;AGCD01016320;GBDF01089694;XM_005380812;XM_005380813;XM_005380814;XM_005380815;XM_005380816;XM_013512389;XM_013512390 XP_005380869;XP_005380870;XP_005380871;XP_005380872;XP_005380873;XP_013367843;XP_013367844 MODEL 8765183 protein-coding LOC102020265 melanoma-associated antigen 8-like NW_004955498 2915975 2916949 - 102020265 AGCD01062848;XM_005406474 XP_005406531 MODEL 8740154 protein-coding Rab25 RAB25, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); myosin V binding (ortholog); INVOLVED IN epithelial cell morphogenesis (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of epithelial cell migration (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2 (ortholog); clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog); pseudopodium (ortholog) NW_004955545 2243237 2250507 + 102020487 AGCD01071891;GBDI01021690;XM_005411651;XM_013508333 XP_005411708;XP_013363787 MODEL 8834386 protein-coding Txndc17 thioredoxin domain containing 17 ENCODES a protein that exhibits protein-disulfide reductase [NAD(P)H] activity (ortholog); INVOLVED IN tumor necrosis factor-mediated signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955467 12144928 12146999 + 102006442 AGCD01051625;GBDF01160110;XM_005399665 XP_005399722 MODEL 8747659 protein-coding LOC102012966 olfactory receptor 13G1 NW_004955418 30326157 30327080 - 102012966 AGCD01019513;XM_005382372 XP_005382429 MODEL 39132773 snrna U6 U6 spliceosomal RNA 8765971 ncrna LOC102021370 uncharacterized LOC102021370 NW_004955426 17761060 17765467 - 102021370 AGCD01026506;GBDK01047985;XR_261199 MODEL 8920249 protein-coding LOC102005257 zinc finger protein 14-like NW_004955417 31483286 31502861 - 102005257 AGCD01018652;AGCD01018653;GBBH01203101;XM_005381973 XP_005382030 MODEL 9040095 protein-coding Scn11a sodium voltage-gated channel alpha subunit 11 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN action potential (ortholog); action potential initiation (ortholog); acute inflammatory response (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); autosomal dominant distal hereditary motor neuronopathy 14 (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); C-fiber (ortholog) NW_004955427 24917709 25109499 + 102028878 AGCD01027525;AGCD01027526;AGCD01027527;AGCD01027528;AGCD01027529;AGCD01027530;AGCD01027531;AGCD01027532;GBDF01016590;XM_013515078;XM_013515079 XP_013370532;XP_013370533 MODEL 8791098 protein-coding Exosc10 exosome component 10 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); RNA exonuclease activity (ortholog); telomerase RNA binding (ortholog); INVOLVED IN CUT catabolic process (ortholog); histone mRNA catabolic process (ortholog); maturation of 5.8S rRNA (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) NW_004955486 2601362 2626451 + 102011668 AGCD01058999;AGCD01059000;GBDF01048997;XM_005404005;XR_263942 XP_005404062 MODEL 8938220 ncrna LOC102012610 uncharacterized LOC102012610 NW_004955407 39310523 39313107 + 102012610 AGCD01007824;GBBH01151673;XR_259626 MODEL 8908461 pseudo LOC102017980 60S ribosomal protein L37 pseudogene NW_004955478 84577 84852 + 102017980 AGCD01055731 MODEL 8967697 protein-coding Cwf19l1 CWF19 like cell cycle control factor 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); autosomal recessive spinocerebellar ataxia 17 (ortholog); FOUND IN nucleus (ortholog) NW_004955507 6106245 6136305 - 102021153 AGCD01065697;GBCQ01175305;XM_005407687;XM_005407688;XM_013506212;XM_013506213 XP_005407744;XP_005407745;XP_013361666;XP_013361667 MODEL 10324220 ncrna LOC106147329 uncharacterized LOC106147329 NW_004955544 224030 229312 - 106147329 AGCD01071698;GBDK01104411;XR_001232172 MODEL 8893359 pseudo LOC102025284 NAD-dependent malic enzyme, mitochondrial pseudogene NW_004955525 4345346 4349829 + 102025284 AGCD01069189 MODEL 730469117 misc_rna LINC00901 Non-coding RNA BC040587 8760666 protein-coding Gcn1 GCN1 activator of EIF2AK4 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein serine/threonine kinase activator activity (ortholog); stalled ribosome sensor activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); GCN2-mediated signaling (ortholog); protein-RNA covalent cross-linking repair (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arthrogryposis multiplex congenita (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) NW_004955455 11416222 11474791 + 102019773 AGCD01046004;AGCD01046005;AGCD01046006;GBDF01085355;XM_013520334 XP_013375788 MODEL 8765380 protein-coding Dmrta2 DMRT like family A2 ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cerebral cortex regionalization (ortholog); dopaminergic neuron differentiation (ortholog); neuron fate specification (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN nucleus (ortholog) NW_004955464 8493392 8498007 + 102028840 AGCD01050088;AGCD01050089;GBBH01118181;GBBH01182835;XM_013521761 XP_013377215 MODEL 8727950 protein-coding Lrrn2 leucine rich repeat neuronal 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog) NW_004955406 40442680 40499945 - 102026715 AGCD01006661;GBCE01162909;XM_005375318 XP_005375375 MODEL 8772405 protein-coding LOC102022072 collagen alpha-1(I) chain-like NW_004955471 2601321 2604050 + 102022072 AGCD01053023;AGCD01053024;GBDF01078910;XM_013522883 XP_013378337 MODEL 39133022 snrna U6 U6 spliceosomal RNA 8729616 protein-coding LOC102014140 olfactory receptor 4C12-like NW_004955422 189242 205026 - 102014140 AGCD01022401;GBDF01176192;XM_005383941;XM_013514328 XP_005383998;XP_013369782 MODEL 8729759 protein-coding LOC102018782 zinc finger protein 709-like NW_004955569 1517762 1537562 + 102018782 AGCD01074661;AGCD01074662;AGCD01074663;AGCD01074664;GBDF01080575;XM_013509365 XP_013364819 MODEL 8820253 protein-coding LOC102007886 putative olfactory receptor 52P1 NW_004955414 21670016 21670951 - 102007886 AGCD01015426;XM_005380499 XP_005380556 MODEL 8920570 ncrna LOC102019194 uncharacterized LOC102019194 NW_004955513 2803458 2806011 + 102019194 AGCD01066890;GBDK01230384;XR_001231760;XR_264459 MODEL 10304093 protein-coding Svip small VCP interacting protein ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN negative regulation of ERAD pathway (ortholog); negative regulation of protein-containing complex assembly (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog); lysosomal membrane (ortholog) NW_004955476 3231789 3236602 - 106146384 AGCD01055239;GBDF01010152;GBDF01010167;XM_013502978 XP_013358432 MODEL 8994793 protein-coding Rab26 RAB26, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GMP binding (ortholog); GTP binding (ortholog); INVOLVED IN exocrine system development (ortholog); Golgi to plasma membrane protein transport (ortholog); regulated exocytosis (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN Golgi membrane (ortholog); plasma membrane (ortholog); secretory granule membrane (ortholog) NW_004955442 15114333 15119481 - 102004014 AGCD01037859;GBBH01180568;XM_005391459;XM_005391461;XM_005391463;XM_005391464;XM_013517638 XP_005391516;XP_005391518;XP_005391520;XP_005391521;XP_013373092 MODEL 8727472 protein-coding LOC102009764 keratin, type II cytoskeletal 75 NW_004955547 2773524 2784448 - 102009764 AGCD01072294;GBCB01107480;XM_005411943 XP_005412000 MODEL 9022696 ncrna LOC102005258 uncharacterized LOC102005258 NW_004955481 9167420 9182478 - 102005258 AGCD01057096;GBDF01041181;XR_263795 MODEL 8911733 protein-coding Slc9a1 solute carrier family 9 member A1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN cardiac muscle cell contraction (ortholog); cardiac muscle cell differentiation (ortholog); cell differentiation (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 19 (ortholog); Barrett's esophagus (ortholog); brain disease (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cation-transporting ATPase complex (ortholog) NW_004955452 6409833 6467841 - 102028491 AGCD01044109;AGCD01044110;AGCD01044111;GBDJ01128349;XM_005394895 XP_005394952 MODEL 8742731 protein-coding LOC102003815 vomeronasal type-2 receptor 116-like NW_004955563 73850 94496 - 102003815 AGCD01074040;AGCD01074041;AGCD01074042;XM_005413096 XP_005413153 MODEL 8809753 protein-coding Glipr2 GLI pathogenesis related 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN positive regulation of epithelial cell migration (ortholog); positive regulation of epithelial to mesenchymal transition (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955472 191886 201551 - 102008400 AGCD01053321;GBCE01004076;GBCE01004077;XM_013523014 XP_013378468 MODEL 8858992 protein-coding Tspoap1 TSPO associated protein 1 ENCODES a protein that exhibits benzodiazepine receptor binding (ortholog); voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels (ortholog); INVOLVED IN regulation of neurotransmitter secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Bardet-Biedl syndrome (ortholog); FOUND IN calyx of Held (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955451 4707440 4733179 + 102027599 AGCD01043140;GBDK01066816;XM_013519267;XM_013519268;XM_013519269;XM_013519270;XM_013519271;XM_013519272 XP_013374721;XP_013374722;XP_013374723;XP_013374724;XP_013374725;XP_013374726 MODEL 8915738 ncrna LOC102023136 uncharacterized LOC102023136 NW_004955413 23428407 23438675 - 102023136 AGCD01014331;GBDK01268729;XR_001233012;XR_001233013 MODEL 126903041 protein-coding DYDC2 DPY30 domain containing 2 8796694 protein-coding LOC102009384 galectin-5-like NW_004955481 5414837 5422402 - 102009384 AGCD01056977;GBBH01036969;XM_013503347 XP_013358801 MODEL 10231724 ncrna LOC106147330 uncharacterized LOC106147330 NW_004955544 3147637 3168448 - 106147330 AGCD01071749;GBCE01066292;XR_001232173;XR_001232174 MODEL 8785719 protein-coding Gtpbp2 GTP binding protein 2 ENCODES a protein that exhibits alpha-aminoacyl-tRNA binding (ortholog); GTP binding (ortholog); identical protein binding (ortholog); INVOLVED IN nuclear-transcribed mRNA catabolic process, no-go decay (ortholog); rescue of stalled cytosolic ribosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholestasis (ortholog) NW_004955437 9414128 9425671 - 102012126 AGCD01034530;AGCD01034531;GBCE01024134;XM_005389782;XM_005389784;XM_013516822;XM_013516823 XP_005389839;XP_005389841;XP_013372276;XP_013372277 MODEL 8881798 pseudo LOC102004558 U1 small nuclear ribonucleoprotein C-like NW_004955406 37620864 37621806 - 102004558 AGCD01006576 MODEL 8812040 protein-coding Lrrn3 leucine rich repeat neuronal 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN positive regulation of protein phosphorylation (ortholog); positive regulation of synapse assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN clathrin adaptor complex (ortholog) NW_004955410 14954301 14986896 + 102013699 AGCD01010916;GBDI01298022;XM_005377312 XP_005377369 MODEL 39132634 snrna U6 U6 spliceosomal RNA 39132774 snrna U6 U6 spliceosomal RNA 8915005 protein-coding Tcf25 transcription factor 25 INVOLVED IN regulation of protein K48-linked ubiquitination (ortholog); rescue of stalled cytosolic ribosome (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleus (ortholog); RQC complex (ortholog) NW_004955541 3362665 3387506 + 102018530 AGCD01071442;GBDF01044094;XM_005411068;XM_005411069 XP_005411125;XP_005411126 MODEL 8929673 protein-coding Txndc2 thioredoxin domain containing 2 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); thioredoxin-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); outer dense fiber (ortholog); sperm flagellum (ortholog) NW_004955402 2339130 2341283 - 102020396 AGCD01000075;AGCD01000076;GBDF01006901;XM_005372590;XM_013514956;XM_013514988;XM_013515047 XP_005372647;XP_013370410;XP_013370442;XP_013370501 MODEL 8788533 protein-coding Nrg4 neuregulin 4 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN ERBB4-ERBB4 signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955450 1174131 1243040 - 102015068 AGCD01042355;AGCD01042356;AGCD01042357;GBDK01176733;XM_005393466;XM_013518947;XM_013518948 XP_005393523;XP_013374401;XP_013374402 MODEL 8759889 protein-coding Tamalin trafficking regulator and scaffold protein tamalin ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); small GTPase binding (ortholog); INVOLVED IN regulation of postsynaptic neurotransmitter receptor internalization (ortholog); signal transduction (ortholog); ASSOCIATED WITH high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic density (ortholog) NW_004955547 2377612 2385918 + 102017509 AGCD01072277;AGCD01072278;AGCD01072279;GBBH01150769;GBDK01141280;XM_013508501;XM_013508503 XP_013363955;XP_013363957 MODEL 8815275 pseudo LOC102019195 60S ribosomal protein L23a pseudogene NW_004955515 3451273 3452933 - 102019195 AGCD01067286 MODEL 8883098 protein-coding LOC102016034 coiled-coil domain-containing protein 162-like NW_004955411 34332752 34419714 + 102016034 AGCD01012397;AGCD01012398;AGCD01012399;GBCB01021639;XM_013510808;XM_013510809;XM_013510811;XM_013510812;XM_013510813;XM_013510814;XM_013510815 XP_013366262;XP_013366263;XP_013366265;XP_013366266;XP_013366267;XP_013366268;XP_013366269 MODEL 39133640 snrna U4 U4 spliceosomal RNA 8826103 protein-coding Il20ra interleukin 20 receptor subunit alpha ENCODES a protein that exhibits interleukin-20 binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-19-mediated signaling pathway (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN interleukin-20 receptor complex (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955436 22281422 22323242 + 102020707 AGCD01034089;AGCD01034090;AGCD01034091;AGCD01034092;AGCD01034093;GBBH01193661;XM_005389282;XM_005389283;XM_005389284;XM_013516702 XP_005389339;XP_005389340;XP_005389341;XP_013372156 MODEL 8765662 protein-coding Xpo6 exportin 6 ENCODES a protein that exhibits nuclear export signal receptor activity (ortholog); INVOLVED IN protein export from nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955493 6172860 6265269 - 102009620 AGCD01061085;GBBH01033663;XM_005405146;XM_005405147;XM_005405149;XM_013504862;XM_013504863 XP_005405203;XP_005405204;XP_005405206;XP_013360316;XP_013360317 MODEL 8755577 protein-coding Rab27a RAB27A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); blood coagulation (ortholog); complement-dependent cytotoxicity (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Chediak-Higashi syndrome (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); dendrite (ortholog); exocytic vesicle (ortholog) NW_004955409 588725 621874 + 102012406 AGCD01009156;AGCD01009157;AGCD01009158;GBCQ01179256;XM_005376611;XM_005376612;XM_005376613;XM_005376614 XP_005376668;XP_005376669;XP_005376670;XP_005376671 MODEL 8788760 protein-coding Ficd FIC domain protein adenylyltransferase ENCODES a protein that exhibits AMPylase activity (ortholog); ATP binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN regulation of IRE1-mediated unfolded protein response (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); hereditary spastic paraplegia 92 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955455 9794919 9799006 + 102023776 AGCD01045930;GBDF01086000;XM_005396460;XM_005396461;XM_005396462;XM_013520486 XP_005396517;XP_005396518;XP_005396519;XP_013375940 MODEL 8890981 protein-coding Tnrc6a trinucleotide repeat containing adaptor 6A INVOLVED IN cellular response to starvation (ortholog); endoderm development (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN P-body (ortholog); RISC complex (ortholog) NW_004955493 3057035 3243668 + 102025809 AGCD01060978;AGCD01060979;AGCD01060980;AGCD01060981;AGCD01060982;AGCD01060983;GBDF01014716;XM_005405109;XM_005405110;XM_005405111;XM_013504798;XM_013504799;XM_013504800;XM_013504801;XM_013504802;XM_013504803 XP_005405166;XP_005405167;XP_005405168;XP_013360252;XP_013360253;XP_013360254;XP_013360255;XP_013360256;XP_013360257 MODEL 8725810 protein-coding LOC102025288 A-kinase anchor protein 5-like NW_004955543 2222873 2226189 + 102025288 AGCD01071648;AGCD01071649;XM_013508141 XP_013363595 MODEL 8923561 protein-coding Slc24a3 solute carrier family 24 member 3 ENCODES a protein that exhibits calcium, potassium:sodium antiporter activity (ortholog); INVOLVED IN bone mineralization (ortholog); calcium ion transmembrane transport (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell periphery (ortholog); plasma membrane (ortholog) NW_004955415 27477801 27930108 + 102019800 AGCD01016632;AGCD01016633;AGCD01016634;AGCD01016635;AGCD01016636;GBCE01151533;GBDK01146008;XM_005380939 XP_005380996 MODEL 8879934 protein-coding Samd4b sterile alpha motif domain containing 4B ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN cerebellar neuron development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955468 172331 199230 - 102023572 AGCD01051684;GBDJ01084508;XM_005399777;XM_005399779;XM_013522377;XM_013522378 XP_005399834;XP_005399836;XP_013377831;XP_013377832 MODEL 8897070 protein-coding Bola3 bolA family member 3 INVOLVED IN adaptive thermogenesis (ortholog); energy homeostasis (ortholog); glucose metabolic process (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH genetic disease (ortholog); multiple mitochondrial dysfunctions syndrome 2 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN iron-sulfur cluster assembly complex (ortholog); mitochondrion (ortholog) NW_004955424 11583508 11590626 + 102005818 AGCD01024571;GBCB01006087;GBCE01055358;XM_005385527 XP_005385584 MODEL 8938453 pseudo LOC102022076 serine/arginine-rich splicing factor 10 pseudogene NW_004955415 23017572 23021966 + 102022076 AGCD01016549 MODEL 8991735 protein-coding Linc02874 long intergenic non-protein coding RNA 2874 NW_004955547 2545043 2551414 - 102017816 AGCD01072283;XM_013508444 XP_013363898 MODEL 9053486 protein-coding LOC102012969 uncharacterized LOC102012969 NW_004955486 114376 172776 - 102012969 AGCD01058804;AGCD01058805;AGCD01058806;AGCD01058807;AGCD01058808;AGCD01058809;AGCD01058810;AGCD01058811;AGCD01058812;AGCD01058813;AGCD01058814;AGCD01058815;AGCD01058816;GBDF01153096;XM_013504134 XP_013359588 MODEL 9064024 protein-coding LOC102021376 LIM zinc-binding domain-containing Nebulette-like NW_004955429 7358758 7369645 + 102021376 AGCD01028590;AGCD01028591;GBBH01110887;GBCQ01178173;XM_005386937 XP_005386994 MODEL 8800821 protein-coding LOC102018784 arylacetamide deacetylase-like NW_004955448 2910775 2917084 - 102018784 AGCD01041293;GBDJ01157315;XM_013518615 XP_013374069 MODEL 39133023 snrna U6 U6 spliceosomal RNA 9002569 protein-coding LOC102020267 chromosome unknown open reading frame, human C5orf22 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955426 17505273 17521743 + 102020267 AGCD01026502;GBCB01058741;XM_005386150 XP_005386207 MODEL 8958487 protein-coding Kiaa1217 KIAA1217 ortholog INVOLVED IN embryonic skeletal system development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) NW_004955429 4587329 5064712 - 102011566 AGCD01028494;AGCD01028495;AGCD01028496;AGCD01028497;AGCD01028498;AGCD01028499;AGCD01028500;AGCD01028501;AGCD01028502;AGCD01028503;GBDK01092702;XM_005386916;XM_005386920;XM_005386924;XM_005386925;XM_005386926;XM_013515407;XM_013515408;XM_013515409;XM_013515410;XM_013515411;XM_013515412;XM_013515413;XM_013515414;XM_013515415;XM_013515416;XM_013515417;XM_013515418;XM_013515419;XM_013515420;XM_013515421 XP_005386973;XP_005386977;XP_005386981;XP_005386982;XP_005386983;XP_013370861;XP_013370862;XP_013370863;XP_013370864;XP_013370865;XP_013370866;XP_013370867;XP_013370868;XP_013370869;XP_013370870;XP_013370871;XP_013370872;XP_013370873;XP_013370874;XP_013370875 MODEL 39131343 protein-coding SIT1 signaling threshold regulating transmembrane adaptor 1 8720560 protein-coding Exosc2 exosome component 2 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN positive regulation of cell growth (ortholog); RNA catabolic process (ortholog); RNA processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); fundus dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); exosome (RNase complex) (ortholog) NW_004955513 639798 648360 + 102017042 AGCD01066829;GBCE01033210;XM_005408346 XP_005408403 MODEL 8825686 pseudo LOC102010572 methionine adenosyltransferase 2 subunit beta pseudogene NW_004955467 10161772 10163152 + 102010572 AGCD01051547 MODEL 8858743 protein-coding Lrrn4 leucine rich repeat neuronal 4 INVOLVED IN long-term memory (ortholog); visual learning (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955415 16413666 16423605 - 102017449 AGCD01016379;AGCD01016380;GBDK01362649;XM_005380853;XM_005380854 XP_005380910;XP_005380911 MODEL 8884389 protein-coding Siva1 SIVA1 apoptosis inducing factor ENCODES a protein that exhibits CD27 receptor binding (ortholog); tumor necrosis factor receptor binding (ortholog); virus receptor activity (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); extrinsic apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH Coxsackievirus Infections (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955538 3197983 3202782 + 102027012 AGCD01071153;GBCB01000476;XM_005410841 XP_005410898 MODEL 8908136 ncrna LOC102003492 uncharacterized LOC102003492 NW_004955442 7304160 7304657 + 102003492 AGCD01037623;GBDF01000001;XR_262125 MODEL 8767453 protein-coding LOC102023139 taste receptor type 2 member 125-like NW_004955413 8005210 8006148 - 102023139 AGCD01013841;XM_005379626 XP_005379683 MODEL 39132273 snrna U6 U6 spliceosomal RNA 8908110 protein-coding Gcna germ cell nuclear acidic peptidase ENCODES a protein that exhibits SUMO polymer binding (ortholog); INVOLVED IN protein-DNA covalent cross-linking repair (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); PML body (ortholog) NW_004955475 11111151 11145474 + 102029073 AGCD01055142;AGCD01055143;GBDF01007488;XM_005401708 XP_005401765 MODEL 8839115 protein-coding Smpd1 sphingomyelin phosphodiesterase 1 ENCODES a protein that exhibits acid sphingomyelin phosphodiesterase activity (ortholog); phosphatidylcholine phospholipase C activity (ortholog); sphingomyelin phosphodiesterase activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to UV (ortholog); ceramide biosynthetic process (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; Trail mediated signaling pathway; ASSOCIATED WITH anemia (ortholog); Blue Nevus (ortholog); Cognitive Dysfunction (ortholog); FOUND IN endolysosome (ortholog); endosome (ortholog); extracellular region (ortholog) NW_004955414 22117929 22121744 + 102019263 AGCD01015443;GBDF01251766;XM_005380132;XM_005380133;XM_005380134 XP_005380189;XP_005380190;XP_005380191 MODEL 8802055 protein-coding Lancl3 LanC like family member 3 ASSOCIATED WITH colon adenocarcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955587 556105 658735 + 102011159 AGCD01076067;AGCD01076068;AGCD01076069;GBDJ01162414;XM_005414448 XP_005414505 MODEL 8860223 pseudo LOC102014141 transmembrane protein 183A-like NW_004955422 11446152 11447336 - 102014141 AGCD01022757 MODEL 8867094 protein-coding Tnrc6b trinucleotide repeat containing adaptor 6B INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); positive regulation of nuclear-transcribed mRNA poly(A) tail shortening (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog) NW_004955413 25820428 26060681 + 102007325 AGCD01014414;AGCD01014415;AGCD01014416;AGCD01014417;AGCD01014418;AGCD01014419;AGCD01014420;AGCD01014421;AGCD01014422;GBDF01248877;XM_005379308;XM_013511418;XM_013511419;XM_013511420 XP_005379365;XP_013366872;XP_013366873;XP_013366874 MODEL 8977287 protein-coding Gtpbp3 GTP binding protein 3, mitochondrial ENCODES a protein that exhibits GTPase activity (ortholog); tRNA 5-taurinomethyluridine synthase activity (ortholog); INVOLVED IN mitochondrial tRNA wobble uridine modification (ortholog); ASSOCIATED WITH anemia (ortholog); autosomal recessive intellectual developmental disorder 53 (ortholog); bilirubin metabolic disorder (ortholog); FOUND IN cytoplasm (ortholog); GTPBP3-MTO1 complex (ortholog); mitochondrion (ortholog) NW_004955524 899475 903168 - 102027106 AGCD01068724;AGCD01068725;GBBH01002959;GBCQ01006793;XM_005409671 XP_005409728 MODEL 8796089 protein-coding Scn1a sodium voltage-gated channel alpha subunit 1 ENCODES a protein that exhibits voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN action potential (ortholog); adult walking behavior (ortholog); cardiac muscle cell action potential involved in contraction (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); intercalated disc (ortholog) NW_004955449 8072910 8220763 + 102009237 AGCD01042008;XM_005393285;XM_005393286;XM_005393287;XM_013518812 XP_005393342;XP_005393343;XP_005393344;XP_013374266 MODEL 8773909 protein-coding LOC102009769 olfactory receptor 7G2-like NW_004955563 256431 260592 + 102009769 AGCD01074056;AGCD01074057;XM_005413198 XP_005413255 MODEL 8920749 protein-coding Svop SV2 related protein FOUND IN synaptic vesicle (ortholog); synaptic vesicle membrane (ortholog) NW_004955455 10131846 10215296 - 102029151 AGCD01045946;AGCD01045947;AGCD01045948;AGCD01045949;GBDJ01093857;XM_005396479 XP_005396536 MODEL 8773622 protein-coding LOC102019201 olfactory receptor 2D2-like NW_004955537 2630803 2631741 - 102019201 AGCD01070933;XM_005410628 XP_005410685 MODEL 8961065 protein-coding LOC102005261 olfactory receptor 1L6 NW_004955419 5210223 5211170 - 102005261 AGCD01019789;XM_005382522 XP_005382579 MODEL 9031589 pseudo LOC102003820 40S ribosomal protein S16 pseudogene NW_004955579 331808 332248 - 102003820 AGCD01075545 MODEL 8961409 protein-coding Tamm41 TAM41 mitochondrial translocator assembly and maintenance homolog ENCODES a protein that exhibits phosphatidate cytidylyltransferase activity (ortholog); PARTICIPATES IN cardiolipin biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955429 14452473 14500441 - 102016831 AGCD01028783;GBDI01325805;XM_005387013;XM_005387014;XM_013515554 XP_005387070;XP_005387071;XP_013371008 MODEL 8709419 pseudo LOC102016036 gamma-secretase subunit APH-1A pseudogene NW_004955465 10446172 10447450 - 102016036 AGCD01050510 MODEL 8729780 protein-coding LOC102020272 olfactory receptor 1044-like NW_004955511 1485460 1486416 + 102020272 AGCD01066369;XM_005408232 XP_005408289 MODEL 9008316 protein-coding Dmrtb1 DMRT like family B with proline rich C-terminal 1 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog) NW_004955464 5719916 5726768 - 102025221 AGCD01050011;AGCD01050012;GBDF01080541;XM_013521575 XP_013377029 MODEL 8956543 protein-coding Glis1 GLIS family zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of cell fate commitment (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955464 5495528 5680114 + 102010980 AGCD01050009;AGCD01050010;GBDF01040036;XM_005398558;XM_013521759 XP_005398615;XP_013377213 MODEL 8854225 protein-coding LOC102003495 protein PBDC1-like NW_004955562 2207581 2209840 + 102003495 AGCD01074028;GBCE01099202;GBDI01000979;XM_005413095 XP_005413152 MODEL 8997933 protein-coding LOC102007889 isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like NW_004955476 1983725 1985174 + 102007889 AGCD01055217;GBDF01044591;XM_005401726 XP_005401783 MODEL 39132635 snrna U6 U6 spliceosomal RNA 8872539 protein-coding Txndc5 thioredoxin domain containing 5 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); protein-disulfide reductase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Arthritis (ortholog); Neoplasm Metastasis (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) NW_004955465 6034006 6053779 + 102027055 AGCD01050437;GBBH01001031;GBCE01006975;XM_005398850 XP_005398907 MODEL 8865005 protein-coding Nrgn neurogranin ENCODES a protein that exhibits calmodulin binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN associative learning (ortholog); positive regulation of long-term synaptic potentiation (ortholog); postsynaptic modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Experimental Seizures (ortholog); hypothyroidism (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendritic spine head (ortholog) NW_004955412 25809512 25818237 + 102014545 AGCD01013174;GBDK01432636;XM_005378442 XP_005378499 MODEL 8767519 protein-coding Tcf3 transcription factor 3 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN B cell lineage commitment (ortholog); cell development (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); agammaglobulinemia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955495 6337311 6365193 + 102027318 AGCD01062073;GBDF01158262;XM_005405953;XM_005405954;XM_005405955;XM_005405956;XM_013505276 XP_005406010;XP_005406011;XP_005406012;XP_005406013;XP_013360730 MODEL 8866487 protein-coding Tfip11 tuftelin interacting protein 11 INVOLVED IN negative regulation of protein-containing complex assembly (ortholog); spliceosomal complex disassembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromosome, telomeric region (ortholog); extracellular matrix (ortholog) NW_004955455 1083816 1097233 - 102015479 AGCD01045568;GBDK01232399;XM_005396148 XP_005396205 MODEL 8845911 protein-coding Slc9a2 solute carrier family 9 member A2 ENCODES a protein that exhibits sodium:proton antiporter activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); intracellular protein localization (ortholog); regulation of intracellular pH (ortholog); ASSOCIATED WITH acute megakaryocytic leukemia (ortholog); aortic dissection (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cell junction (ortholog) NW_004955470 8083737 8137372 + 102022379 AGCD01052819;GBCE01186945;XM_005400774 XP_005400831 MODEL 39131356 protein-coding IL20RB interleukin 20 receptor subunit beta 8725832 protein-coding Dydc2 DPY30 domain containing 2 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955510 337286 348640 + 102026895 AGCD01066145;GBDF01053016;XM_013506330 XP_013361784 MODEL 9006740 protein-coding Xpo7 exportin 7 ENCODES a protein that exhibits nuclear export signal receptor activity (ortholog); INVOLVED IN protein export from nucleus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); nuclear pore (ortholog); nucleus (ortholog) NW_004955403 45470932 45508691 + 102029143 AGCD01002816;GBBH01206500;XM_005373641;XM_005373642 XP_005373698;XP_005373699 MODEL 8917995 protein-coding LOC102004559 chromosome unknown open reading frame, human C12orf43 ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); thymoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955455 10684757 10693511 + 102004559 AGCD01045961;GBDF01224343;XM_005396486;XM_005396487;XM_005396488;XM_005396489 XP_005396543;XP_005396544;XP_005396545;XP_005396546 MODEL 8831464 protein-coding Fig4 FIG4 phosphoinositide 5-phosphatase ENCODES a protein that exhibits phosphatidylinositol bisphosphate phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process (ortholog); locomotory behavior (ortholog); myelin assembly (ortholog); PARTICIPATES IN inositol metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 11 (ortholog); FOUND IN endosome membrane (ortholog); PAS complex (ortholog); recycling endosome (ortholog) NW_004955411 3135752 3217891 - 102015087 AGCD01011539;AGCD01011540;AGCD01011541;AGCD01011542;GBDF01046654;GBDF01121439;XM_005377617 XP_005377674 MODEL 8934546 protein-coding LOC102005263 E3 ubiquitin-protein ligase TRIM38-like NW_004955483 1063852 1071092 + 102005263 AGCD01057639;XM_013503764 XP_013359218 MODEL 8699839 protein-coding Six1 SIX homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN aorta morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); cellular response to 3,3',5-triiodo-L-thyronine (ortholog); ASSOCIATED WITH 22q11 Deletion Syndrome (ortholog); autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 23 (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955466 8961597 8966069 + 102016994 AGCD01051010;AGCD01051011;GBDI01084435;XM_005399176 XP_005399233 MODEL 8821925 pseudo LOC102012616 phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-like NW_004955410 34241134 34241470 - 102012616 AGCD01011399 MODEL 39132276 snrna U6 U6 spliceosomal RNA 8908573 ncrna LOC102022080 uncharacterized LOC102022080 NW_004955480 10241219 10313855 - 102022080 AGCD01056760;AGCD01056761;AGCD01056762;AGCD01056763;GBDF01121481;XR_263752 MODEL 9018351 protein-coding Slc24a4 solute carrier family 24 member 4 ENCODES a protein that exhibits calcium, potassium:sodium antiporter activity (ortholog); calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); INVOLVED IN amelogenesis (ortholog); calcium ion export across plasma membrane (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amelogenesis imperfecta (ortholog); amelogenesis imperfecta hypomaturation type 2A5 (ortholog); FOUND IN apical plasma membrane (ortholog); cone photoreceptor outer segment (ortholog); cytoplasm (ortholog) NW_004955438 14609779 14765516 + 102026477 AGCD01035347;AGCD01035348;AGCD01035349;AGCD01035350;GBDI01034773;XM_005390329;XM_013517214 XP_005390386;XP_013372668 MODEL 8899142 protein-coding Boll boule RNA binding protein ENCODES a protein that exhibits identical protein binding (ortholog); translation activator activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); positive regulation of translational initiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) NW_004955403 2917694 2963470 + 102012820 AGCD01001740;AGCD01001741;AGCD01001742;GBDF01004912;XM_005373262;XM_013512039;XM_013512041 XP_005373319;XP_013367493;XP_013367495 MODEL 8788617 protein-coding LOC102017983 histone H3 NW_004955483 832295 834112 - 102017983 AGCD01057632;XM_013503790 XP_013359244 MODEL 8797070 protein-coding Samd5 sterile alpha motif domain containing 5 ASSOCIATED WITH Familial Prostate Cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955867 2559 3237 - 102020516 AGCD01078524;GBCQ01114304;GBDK01194475;XM_005415139 XP_005415196 MODEL 9018083 ncrna LOC102012970 uncharacterized LOC102012970 NW_004955420 29437923 29445279 + 102012970 AGCD01021502;GBDJ01336190;XR_001233709;XR_001233710 MODEL 9026225 protein-coding Smpd2 sphingomyelin phosphodiesterase 2 ENCODES a protein that exhibits phosphoric diester hydrolase activity (ortholog); sphingomyelin phosphodiesterase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); ceramide metabolic process (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN caveola (ortholog); plasma membrane (ortholog) NW_004955411 34481431 34484423 + 102019678 AGCD01012401;AGCD01012402;GBCE01076449;GBDF01046449;XM_005377875 XP_005377932 MODEL 9035453 ncrna LOC102018786 uncharacterized LOC102018786 NW_004955589 799399 809196 + 102018786 AGCD01076183;GBCQ01013843;XR_001232533;XR_001232534 MODEL 39133641 snrna U4 U4 spliceosomal RNA 8750555 protein-coding Kiaa1328 KIAA1328 ortholog ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955402 23298244 23591420 + 102013887 AGCD01000621;AGCD01000622;AGCD01000623;AGCD01000624;AGCD01000625;AGCD01000626;AGCD01000627;AGCD01000628;AGCD01000629;GBDF01084579;XM_005372825;XM_005372826;XM_005372827;XM_005372829;XM_005372830;XM_005372832;XM_013510276;XM_013510283;XM_013510287;XM_013510296 XP_005372882;XP_005372883;XP_005372884;XP_005372886;XP_005372887;XP_005372889;XP_013365730;XP_013365737;XP_013365741;XP_013365750 MODEL 8797586 protein-coding Lap3 leucine aminopeptidase 3 ENCODES a protein that exhibits aminopeptidase activity (ortholog); carboxypeptidase activity (ortholog); peptidase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); trans-Golgi network (ortholog) NW_004955480 6565071 6588682 - 102008625 AGCD01056686;GBDF01080531;XM_005402497 XP_005402554 MODEL 8733326 protein-coding Exosc3 exosome component 3 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN CUT catabolic process (ortholog); DNA deamination (ortholog); isotype switching (ortholog); ASSOCIATED WITH cerebellar hypoplasia (ortholog); cervical cancer (ortholog); congenital myopathy (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic exosome (RNase complex) (ortholog); cytosol (ortholog) NW_004955419 28683896 28692006 + 102028969 AGCD01020473;GBCQ01174458;XM_005382860 XP_005382917 MODEL 9031152 protein-coding Gtpbp4 GTP binding protein 4 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); preribosome binding (ortholog); INVOLVED IN maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); negative regulation of cell migration (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955492 5594 33558 - 102010814 AGCD01060626;GBDJ01135226;XM_005404907 XP_005404964 MODEL 8962666 ncrna LOC102010573 uncharacterized LOC102010573 NW_004955468 2472919 2491755 + 102010573 AGCD01051821;AGCD01051822;AGCD01051823;GBDF01158088;XR_263379 MODEL 8701178 protein-coding Lrrn4cl LRRN4 C-terminal like ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955599 514328 516684 + 102012387 AGCD01076654;GBDI01220215;XM_005414782 XP_005414839 MODEL 8708121 pseudo LOC102025302 zinc finger protein 791 pseudogene NW_004955448 14214649 14216042 - 102025302 AGCD01041628 MODEL 10089843 ncrna LOC106147331 uncharacterized LOC106147331 NW_004955544 369012 369739 + 106147331 AGCD01071704;GBDK01042139;XR_001232175 MODEL 8713993 protein-coding LOC102009385 olfactory receptor 2T27-like NW_004955418 29991095 30001887 - 102009385 AGCD01019496;XM_005382363 XP_005382420 MODEL 8836408 pseudo LOC102020273 tripartite motif-containing protein 59-like NW_004955513 5722667 5726079 + 102020273 AGCD01066981 MODEL 8965813 ncrna Linc02915 long independently transcribed non-coding RNA 2915 NW_004955416 6178585 6178974 + 102005140 AGCD01016933;XM_005415397 XP_005415454 MODEL 8915665 protein-coding Slc9a3 solute carrier family 9 member A3 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN circadian rhythm (ortholog); intracellular sodium ion homeostasis (ortholog); receptor-mediated endocytosis (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cholangiocarcinoma (ortholog); chronic kidney disease (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) NW_004955504 226192 260632 - 102021372 AGCD01064816;GBCQ01005944;XM_005407000;XM_005407001 XP_005407057;XP_005407058 MODEL 8937933 protein-coding Cwf19l2 CWF19 like cell cycle control factor 2 INVOLVED IN mRNA splicing, via spliceosome (ortholog); single fertilization (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog); post-mRNA release spliceosomal complex (ortholog); spliceosomal complex (ortholog) NW_004955412 9758751 9861019 - 102027957 AGCD01012746;AGCD01012747;AGCD01012748;AGCD01012749;GBDK01116496;XM_005378021 XP_005378078 MODEL 39132775 snrna U6 U6 spliceosomal RNA 8947267 protein-coding LOC102023141 interleukin-36 gamma NW_004955470 1330732 1339123 - 102023141 AGCD01052634;GBCC01001156;XM_013522843;XM_013522844 XP_013378297;XP_013378298 MODEL 39132279 snrna U6 U6 spliceosomal RNA 8839929 protein-coding Tnrc6c trinucleotide repeat containing adaptor 6C INVOLVED IN embryonic hemopoiesis (ortholog); embryonic organ development (ortholog); endoderm development (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955506 4440555 4579642 - 102011463 AGCD01065338;AGCD01065339;AGCD01065340;AGCD01065341;GBBH01102456;GBDJ01083074;XM_005407391 XP_005407448 MODEL 8883745 ncrna LOC102007891 uncharacterized LOC102007891 NW_004955417 4393900 4397203 + 102007891 AGCD01017946;GBDF01263566;XR_260459 MODEL 8906414 protein-coding Tspyl1 TSPY like 1 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); gonadal dysgenesis (ortholog); sudden infant death syndrome (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955526 539178 552120 + 102011239 AGCD01069240;GBDI01081447;XM_013507351 XP_013362805 MODEL 8963119 ncrna LOC102003499 uncharacterized LOC102003499 NW_004955446 7604429 7625603 + 102003499 AGCD01040126;GBDF01002983;XR_262378;XR_262379 MODEL 8841268 protein-coding Svopl SVOP like ASSOCIATED WITH acute myeloid leukemia (ortholog); Hydrops Fetalis (ortholog); lung cancer (ortholog) NW_004955494 4252086 4353472 + 102003777 AGCD01061493;AGCD01061494;AGCD01061495;GBDJ01313554;XM_005405456;XM_013504967;XM_013504968;XM_013504969;XM_013504970;XM_013504971;XM_013504973;XM_013504974;XM_013504975;XM_013504976 XP_005405513;XP_013360421;XP_013360422;XP_013360423;XP_013360424;XP_013360425;XP_013360427;XP_013360428;XP_013360429;XP_013360430 MODEL 9015917 protein-coding Rab27b RAB27B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); multivesicular body sorting pathway (ortholog); positive regulation of exocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Disease Progression (ortholog); FOUND IN apical plasma membrane (ortholog); Golgi apparatus (ortholog); Golgi stack (ortholog) NW_004955402 39357500 39415530 + 102026492 AGCD01000980;AGCD01000981;GBCE01129930;XM_005372952;XM_013510869 XP_005373009;XP_013366323 MODEL 8718383 protein-coding Nrip1 nuclear receptor interacting protein 1 ENCODES a protein that exhibits histone deacetylase binding (ortholog); nuclear estrogen receptor binding (ortholog); nuclear glucocorticoid receptor binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); PARTICIPATES IN estrogen signaling pathway; forkhead class A signaling pathway; retinoic acid signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); congenital anomalies of the kidney and urinary tract 3 (ortholog); congestive heart failure (ortholog); FOUND IN chromatin (ortholog); histone deacetylase complex (ortholog); nuclear speck (ortholog) NW_004955407 16740253 16820297 - 102008061 AGCD01007226;AGCD01007227;AGCD01007228;GBDJ01419988;XM_005375568;XM_005375569;XM_005375570 XP_005375625;XP_005375626;XP_005375627 MODEL 8734928 protein-coding Kiaa1549 KIAA1549 ortholog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN photoreceptor connecting cilium (ortholog) NW_004955494 4067813 4152368 + 102009623 AGCD01061493;GBBH01207967;XM_005405541 XP_005405598 MODEL 8900542 protein-coding Gcnt1 glucosaminyl (N-acetyl) transferase 1 ENCODES a protein that exhibits beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN cell adhesion molecule production (ortholog); glycoprotein biosynthetic process (ortholog); kidney morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN extracellular region (ortholog); Golgi cisterna (ortholog); Golgi membrane (ortholog) NW_004955512 2827321 2857777 - 102028781 AGCD01066690;GBBH01117760;XM_005408306;XM_005408307 XP_005408363;XP_005408364 MODEL 8836236 protein-coding Dmrtc2 DMRT like family C2 ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN heterochromatin organization (ortholog); male meiosis I (ortholog); spermatid nucleus elongation (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN XY body (ortholog) NW_004955555 983451 989044 - 102011917 AGCD01073054;AGCD01073055;GBDK01151937;XM_005412427;XM_013508722;XM_013508723;XM_013508724;XM_013508725;XM_013508726;XM_013508727;XM_013508728 XP_005412484;XP_013364176;XP_013364177;XP_013364178;XP_013364179;XP_013364180;XP_013364181;XP_013364182 MODEL 8715561 ncrna LOC102014142 uncharacterized LOC102014142 NW_004955422 14683499 14685264 + 102014142 AGCD01022863;GBDF01252177;XR_001233942 MODEL 8989805 protein-coding Swap70 switching B cell complex subunit SWAP70 ENCODES a protein that exhibits ATP binding (ortholog); DNA binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); isotype switching (ortholog); negative regulation of actin filament depolymerization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955414 25385648 25444743 + 102004157 AGCD01015603;AGCD01015604;AGCD01015605;AGCD01015606;GBBH01063476;GBDI01082268;XM_013512023 XP_013367477 MODEL 8964989 pseudo LOC102021377 nucleosome assembly protein 1-like 1 pseudogene NW_004955429 13983451 13984153 - 102021377 AGCD01028771 MODEL 39133024 snrna U6 U6 spliceosomal RNA 9021303 ncrna LOC102012627 uncharacterized LOC102012627 NW_004955414 6716037 6849197 - 102012627 AGCD01014930;AGCD01014931;AGCD01014932;AGCD01014933;AGCD01014934;AGCD01014935;AGCD01014936;AGCD01014937;AGCD01014938;AGCD01014939;AGCD01014940;GBDK01105428;XR_001233085;XR_001233086;XR_001233087;XR_001233088;XR_001233089;XR_001233090;XR_001233091;XR_001233092;XR_001233093;XR_260159;XR_260161 MODEL 8889216 protein-coding LOC102022087 zinc finger protein OZF-like NW_004955421 22041918 22093237 + 102022087 AGCD01022127;GBBH01210033;XM_013513778;XM_013513779;XM_013513780;XM_013513781 XP_013369232;XP_013369233;XP_013369234;XP_013369235 MODEL 10327845 pseudo LOC102009773 Ig heavy chain V-III region 23-like NW_004955569 3800 4314 + 102009773 AGCD01074556 MODEL 8728607 protein-coding LOC102023144 olfactory receptor 51F2-like NW_004955414 20313365 20314315 + 102023144 AGCD01015368;XM_005380468 XP_005380525 MODEL 8953172 protein-coding Bop1 BOP1 ribosomal biogenesis factor ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); maturation of 5.8S rRNA (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Disease Progression (ortholog); melanoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955454 2882694 2907177 - 102026942 AGCD01045038;AGCD01045039;GBBH01143564;XM_005395860 XP_005395917 MODEL 8830807 ncrna LOC102019204 uncharacterized LOC102019204 NW_004955439 6299763 6305652 - 102019204 AGCD01035750;GBDF01188259;XR_261973 MODEL 8790356 protein-coding LOC102003821 HLA class I histocompatibility antigen, B-14 alpha chain-like NW_004955583 520916 524888 + 102003821 AGCD01075833;AGCD01075834;GBBH01118053;XM_013509777 XP_013365231 MODEL 8932474 protein-coding Il20rb interleukin 20 receptor subunit beta ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-20 binding (ortholog); INVOLVED IN homeostasis of number of cells within a tissue (ortholog); immune response-inhibiting signal transduction (ortholog); inflammatory response to antigenic stimulus (ortholog); ASSOCIATED WITH ovarian cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); toxic shock syndrome (ortholog); FOUND IN interleukin-20 receptor complex (ortholog); signaling receptor complex (ortholog) NW_004955501 1826687 1863261 - 102016401 AGCD01064063;AGCD01064064;GBCC01037652;XM_013505811;XR_001231528 XP_013361265 MODEL 9063155 protein-coding LOC102016042 histone acetyltransferase p300-like NW_004955413 26818579 26828627 + 102016042 AGCD01014479;AGCD01014480;AGCD01014481;AGCD01014482;GBCE01056132;XM_005379341 XP_005379398 MODEL 8727530 protein-coding Laptm4a lysosomal protein transmembrane 4 alpha ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog); FOUND IN Golgi apparatus (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955469 2604464 2626835 - 102012419 AGCD01052279;AGCD01052280;GBBH01004233;XM_005400342 XP_005400399 MODEL 8775609 protein-coding Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 INVOLVED IN dendritic spine maintenance (ortholog); myoblast fusion (ortholog); regulation of postsynapse organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955449 14353693 14586010 - 102007717 AGCD01042164;AGCD01042165;AGCD01042166;AGCD01042167;GBDK01276459;XM_005393379;XM_005393380;XM_005393381;XM_013518760;XM_013518761;XM_013518762;XM_013518763;XM_013518764;XM_013518765;XM_013518767 XP_005393436;XP_005393437;XP_005393438;XP_013374214;XP_013374215;XP_013374216;XP_013374217;XP_013374218;XP_013374219;XP_013374221 MODEL 8747432 pseudo LOC102004564 abl interactor 1 pseudogene NW_004955407 18718421 18719424 + 102004564 AGCD01007275 MODEL 8716527 protein-coding Figla folliculogenesis specific bHLH transcription factor ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); E-box binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); genetic disease (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955424 14393566 14402971 + 102003889 AGCD01024654;GBDF01007679;XM_013514581;XM_013514582 XP_013370035;XP_013370036 MODEL 8836320 protein-coding Glis2 GLIS family zinc finger 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell differentiation involved in kidney development (ortholog); hematopoietic stem cell homeostasis (ortholog); kidney development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); non-motile cilium (ortholog); nuclear speck (ortholog) NW_004955442 13097636 13113514 - 102013557 AGCD01037757;GBCE01114754;XM_005391303;XM_013517807 XP_005391360;XP_013373261 MODEL 8736802 protein-coding Dym dymeclin ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN bone development (ortholog); Golgi organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); connective tissue disease (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) NW_004955402 34150783 34541944 - 102011262 AGCD01000852;AGCD01000853;AGCD01000854;AGCD01000855;AGCD01000856;AGCD01000857;AGCD01000858;AGCD01000859;AGCD01000860;AGCD01000861;AGCD01000862;GBDK01133357;XM_005372905;XM_005372906 XP_005372962;XP_005372963 MODEL 8887285 protein-coding Xpot exportin for tRNA ENCODES a protein that exhibits tRNA binding (ortholog); INVOLVED IN tRNA export from nucleus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear pore (ortholog) NW_004955458 11162612 11206515 + 102020214 AGCD01047726;AGCD01047727;AGCD01047728;AGCD01047729;AGCD01047730;GBCQ01038249;XM_005397439;XM_013520915;XM_013520916;XM_013520917;XM_013520918 XP_005397496;XP_013376369;XP_013376370;XP_013376371;XP_013376372 MODEL 8961068 protein-coding LOC102005270 uncharacterized LOC102005270 NW_004955494 876724 895412 - 102005270 AGCD01061387;AGCD01061388;GBDI01038326;XM_013505014;XR_001231324;XR_001231325;XR_001231326;XR_001231327 XP_013360468 MODEL 8705090 protein-coding Scn1b sodium voltage-gated channel beta subunit 1 ENCODES a protein that exhibits sodium channel inhibitor activity (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN axon guidance (ortholog); cardiac conduction (ortholog); cardiac muscle cell action potential involved in contraction (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH asphyxiating thoracic dystrophy 3 (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN extracellular region (ortholog); intercalated disc (ortholog); node of Ranvier (ortholog) NW_004955468 4375517 4383383 + 102009704 AGCD01051908;GBDI01008492;GBDJ01353495;XM_013522375 XP_013377829 MODEL 8775663 protein-coding Six2 SIX homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); cell migration (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); chronic kidney disease (ortholog); cleft palate (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955441 12029530 12033214 - 102008033 AGCD01037116;GBBH01030680;GBCB01005025;XM_005390965 XP_005391022 MODEL 8794878 protein-coding LOC102017986 neutrophil gelatinase-associated lipocalin-like NW_004955419 46267 52358 - 102017986 AGCD01019560;AGCD01019561;GBDJ01026132;XM_005382913 XP_005382970 MODEL 8719963 protein-coding Slc24a5 solute carrier family 24 member 5 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); calcium, potassium:sodium antiporter activity (ortholog); INVOLVED IN calcium ion import (ortholog); monoatomic ion transmembrane transport (ortholog); negative regulation of melanin biosynthetic process (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Albinism (ortholog); genetic disease (ortholog); ocular albinism 1 (ortholog); FOUND IN melanosome (ortholog); trans-Golgi network (ortholog) NW_004955409 5747624 5768122 - 102013803 AGCD01009322;AGCD01009323;GBDI01093137;XM_005376708 XP_005376765 MODEL 8843458 protein-coding Lingo1 leucine rich repeat and Ig domain containing 1 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); INVOLVED IN central nervous system neuron development (ortholog); negative regulation of oligodendrocyte differentiation (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 64 (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); presynapse (ortholog) NW_004955450 2435768 2493387 - 102023651 AGCD01042383;AGCD01042384;AGCD01042385;GBDI01366797;XM_005393495;XM_005393496;XM_005393497;XM_005393498;XM_013518819 XP_005393552;XP_005393553;XP_005393554;XP_005393555;XP_013374273 MODEL 9010634 protein-coding Swi5 SWI5 homologous recombination repair protein INVOLVED IN cellular response to ionizing radiation (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); Swi5-Sfr1 complex (ortholog) NW_004955570 799332 808368 + 102024732 AGCD01074766;AGCD01074767;GBDF01007129;XM_005413639 XP_005413696 MODEL 39133647 snrna U4 U4 spliceosomal RNA 39132636 snrna U6 U6 spliceosomal RNA 8815727 protein-coding Txndc9 thioredoxin domain containing 9 ASSOCIATED WITH esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955470 5608980 5620386 - 102012308 AGCD01052755;AGCD01052756;GBCE01054163;XM_005400746 XP_005400803 MODEL 8902065 protein-coding Tcf4 transcription factor 4 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN endothelial cell activation (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); astigmatism (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); beta-catenin-TCF7L2 complex (ortholog); chromatin (ortholog) NW_004955402 39735596 40066151 - 102027923 AGCD01000987;AGCD01000988;AGCD01000989;GBCE01097950;GBDI01221715;XM_013510941;XM_013510945;XM_013510949;XM_013510953;XM_013510957;XM_013510967;XM_013510968;XM_013510969;XM_013510970 XP_013366395;XP_013366399;XP_013366403;XP_013366407;XP_013366411;XP_013366421;XP_013366422;XP_013366423;XP_013366424 MODEL 8727485 protein-coding Tspyl2 TSPY like 2 INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of DNA replication (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Endometrial Neoplasms (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955475 160768 167359 + 102010477 AGCD01054680;GBBH01208279;XM_005401476 XP_005401533 MODEL 8884705 protein-coding Tfpi tissue factor pathway inhibitor INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to steroid hormone stimulus (ortholog); PARTICIPATES IN coagulation cascade pathway; syndecan signaling pathway; ASSOCIATED WITH Airway Obstruction (ortholog); atrial fibrillation (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); extracellular region (ortholog) NW_004955403 10925155 11004229 + 102011608 AGCD01001942;AGCD01001943;AGCD01001944;AGCD01001945;GBCQ01095047;XM_005373329 XP_005373386 MODEL 8811238 pseudo LOC102010574 sodium channel modifier 1 pseudogene NW_004955413 9333530 9334670 - 102010574 AGCD01013903 MODEL 10359863 ncrna LOC106147332 uncharacterized LOC106147332 NW_004955544 2118005 2299712 + 106147332 AGCD01071732;AGCD01071733;AGCD01071734;AGCD01071735;XR_001232176 MODEL 8935855 protein-coding Tns1 tensin 1 INVOLVED IN cell-matrix adhesion (ortholog); cell-substrate junction assembly (ortholog); fibroblast migration (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); cholangiocarcinoma (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN cell surface (ortholog); cell-substrate junction (ortholog); cytoplasm (ortholog) NW_004955453 15289722 15483970 + 102017191 AGCD01044891;GBCE01030185;XM_005395673;XM_005395676;XM_005395677;XM_005395678;XM_005395679;XM_013519826;XM_013519827;XM_013519828;XM_013519829;XM_013519830;XM_013519831;XM_013519832;XM_013519834 XP_005395730;XP_005395733;XP_005395734;XP_005395735;XP_005395736;XP_013375280;XP_013375281;XP_013375282;XP_013375283;XP_013375284;XP_013375285;XP_013375286;XP_013375288 MODEL 8730405 protein-coding Gtpbp6 GTP binding protein 6 ENCODES a protein that exhibits GTP binding (ortholog); mitochondrial large ribosomal subunit binding (ortholog); ribosomal large subunit binding (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); ribosome disassembly (ortholog); FOUND IN extrinsic component of mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955499 585338 591993 - 102023375 AGCD01063244;AGCD01063245;AGCD01063246;GBBH01207851;GBDI01293909;XM_013505582 XP_013361036 MODEL 39133648 snrna U4 U4 spliceosomal RNA 8726944 protein-coding Rab28 RAB28, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN photoreceptor cell maintenance (ortholog); visual perception (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); cone dystrophy (ortholog); FOUND IN ciliary basal body (ortholog); ciliary rootlet (ortholog); cytoplasm (ortholog) NW_004955480 10220811 10374021 + 102021555 AGCD01056760;AGCD01056761;AGCD01056762;AGCD01056763;AGCD01056764;AGCD01056765;AGCD01056766;GBCE01031034;XM_005402540;XM_005402541;XM_013503323;XM_013503324;XM_013503325;XM_013503326;XR_001230910 XP_005402597;XP_005402598;XP_013358777;XP_013358778;XP_013358779;XP_013358780 MODEL 8986303 protein-coding Il21 interleukin 21 ENCODES a protein that exhibits cytokine receptor binding (ortholog); interleukin-2 receptor binding (ortholog); INVOLVED IN cell maturation (ortholog); cellular response to virus (ortholog); germinal center B cell differentiation (ortholog); ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); allergic disease (ortholog); Animal Toxoplasmosis (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955428 18057096 18065492 + 102014809 AGCD01028056;XM_005386769 XP_005386826 MODEL 8895939 protein-coding Slc9a4 solute carrier family 9 member A4 ENCODES a protein that exhibits sodium:proton antiporter activity (ortholog); INVOLVED IN epithelial cell development (ortholog); gastric acid secretion (ortholog); transepithelial ammonium transport (ortholog); ASSOCIATED WITH Acidoses (ortholog); aortic dissection (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); zymogen granule membrane (ortholog) NW_004955470 7936677 7989946 + 102021871 AGCD01052816;GBDK01123983;XM_005400773 XP_005400830 MODEL 39132776 snrna U6 U6 spliceosomal RNA 9030663 protein-coding Cwh43 cell wall biogenesis 43 C-terminal homolog INVOLVED IN brain development (ortholog); cell adhesion (ortholog); cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955447 18683173 18733546 - 102020393 AGCD01041183;AGCD01041184;GBDJ01334628;XM_005392926 XP_005392983 MODEL 9049852 protein-coding Samd7 sterile alpha motif domain containing 7 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); negative regulation of gene expression, epigenetic (ortholog); retinal rod cell development (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); macular degeneration (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); PRC1 complex (ortholog) NW_004955420 161353 178768 + 102015524 AGCD01020535;XM_005382960;XM_013513564 XP_005383017;XP_013369018 MODEL 39132282 snrna U6 U6 spliceosomal RNA 8760463 ncrna LOC102007892 uncharacterized LOC102007892 NW_004955417 12654544 12663569 - 102007892 AGCD01018162;GBDF01040430;XR_001233450;XR_260476 MODEL 8846729 pseudo LOC102025304 high mobility group protein B1 pseudogene NW_004955402 47542016 47542603 + 102025304 AGCD01001190 MODEL 8791133 protein-coding Lrrtm1 leucine rich repeat transmembrane neuronal 1 INVOLVED IN exploration behavior (ortholog); locomotory behavior (ortholog); long-term synaptic potentiation (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); endoplasmic reticulum (ortholog) NW_004955424 6322284 6337550 + 102011783 AGCD01024421;AGCD01024422;GBBH01128637;XM_013514747 XP_013370201 MODEL 9053426 ncrna LOC102009386 uncharacterized LOC102009386 NW_004955483 2296014 2317875 + 102009386 AGCD01057673;GBDF01118867;XR_001231019 MODEL 8823528 pseudo LOC102020274 dnaJ homolog subfamily A member 1-like NW_004955432 22754012 22756732 - 102020274 AGCD01031266 MODEL 8728466 protein-coding Lingo2 leucine rich repeat and Ig domain containing 2 ASSOCIATED WITH amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); synaptic membrane (ortholog) NW_004955472 5790522 6971152 + 102017227 AGCD01053584;AGCD01053585;AGCD01053586;AGCD01053587;AGCD01053588;AGCD01053589;AGCD01053590;AGCD01053591;AGCD01053592;AGCD01053593;AGCD01053594;AGCD01053595;AGCD01053596;AGCD01053597;AGCD01053598;AGCD01053599;AGCD01053600;AGCD01053601;AGCD01053602;AGCD01053603;AGCD01053604;AGCD01053605;AGCD01053606;AGCD01053607;AGCD01053608;AGCD01053609;AGCD01053610;AGCD01053611;AGCD01053612;AGCD01053613;GBDK01171049;XM_005401120;XM_005401121;XM_005401122;XR_001237087;XR_263553;XR_263554;XR_263555;XR_263556;XR_263557;XR_263558;XR_263559 XP_005401177;XP_005401178;XP_005401179 MODEL 8997820 protein-coding Txnip thioredoxin interacting protein ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to tumor cell (ortholog); keratinocyte differentiation (ortholog); negative regulation of cell division (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); COVID-19 (ortholog); Diabetic Nephropathies (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955568 103801 107791 + 102029239 AGCD01074503;GBCB01005233;XM_005413419 XP_005413476 MODEL 8828143 protein-coding Gcnt3 glucosaminyl (N-acetyl) transferase 3, mucin type ENCODES a protein that exhibits acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity (ortholog); N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN intestinal absorption (ortholog); kidney morphogenesis (ortholog); tissue morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955450 15204502 15211747 - 102012263 AGCD01042785;GBDF01013134;XM_005393829;XM_005393830;XM_005393831;XM_013519008 XP_005393886;XP_005393887;XP_005393888;XP_013374462 MODEL 39133025 snrna U6 U6 spliceosomal RNA 8792461 protein-coding LOC102014144 putative vomeronasal receptor-like protein 4 NW_004955494 8313356 8317792 + 102014144 AGCD01061582;XM_005405546 XP_005405603 MODEL 8713466 protein-coding Dmtf1 cyclin D binding myb like transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955621 50457 95460 - 102016546 AGCD01077372;AGCD01077373;GBDI01173819;XM_005415012;XM_013510153;XM_013510154;XM_013510155 XP_005415069;XP_013365607;XP_013365608;XP_013365609 MODEL 8936027 protein-coding Lrrtm2 leucine rich repeat transmembrane neuronal 2 ENCODES a protein that exhibits neurexin family protein binding (ortholog); INVOLVED IN long-term synaptic potentiation (ortholog); negative regulation of receptor internalization (ortholog); regulation of postsynaptic density assembly (ortholog); FOUND IN excitatory synapse (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955418 1636906 1643430 + 102023471 AGCD01018724;XM_005382088 XP_005382145 MODEL 9065555 protein-coding Gtpbp8 GTP binding protein 8 (putative) ENCODES a protein that exhibits GTPase activity (ortholog); RNA binding (ortholog); INVOLVED IN mitochondrial fission (ortholog); mitochondrial large ribosomal subunit assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN extrinsic component of mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955427 13219503 13235198 + 102030335 AGCD01027241;GBDF01213458;XM_005386395;XM_013515166 XP_005386452;XP_013370620 MODEL 9035296 protein-coding Xpr1 xenotropic and polytropic retrovirus receptor 1 ENCODES a protein that exhibits efflux transmembrane transporter activity (ortholog); inositol hexakisphosphate binding (ortholog); phosphate transmembrane transporter activity (ortholog); INVOLVED IN intracellular phosphate ion homeostasis (ortholog); phosphate ion transmembrane transport (ortholog); response to virus (ortholog); ASSOCIATED WITH basal ganglia disease (ortholog); Breast Cancer, Familial (ortholog); calcinosis (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 19831398 19980994 + 102011949 AGCD01006093;AGCD01006094;AGCD01006095;GBDF01122624;XM_013503153 XP_013358607 MODEL 8980809 protein-coding Smpd3 sphingomyelin phosphodiesterase 3 ENCODES a protein that exhibits identical protein binding (ortholog); neutral sphingomyelin phosphodiesterase activity (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); BMP signaling pathway (ortholog); bone development (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); head and neck squamous cell carcinoma (ortholog); hypopituitarism (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); Golgi cis cisterna (ortholog) NW_004955484 8207686 8298164 + 102008416 AGCD01058372;AGCD01058373;AGCD01058374;GBCE01078867;XM_005403580;XM_013503919;XM_013503920 XP_005403637;XP_013359373;XP_013359374 MODEL 8881077 ncrna LOC102003500 uncharacterized LOC102003500 NW_004955575 638720 645615 + 102003500 AGCD01075227;GBDK01352758;XR_265069 MODEL 8790765 protein-coding Exosc4 exosome component 4 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); RNA exonuclease activity (ortholog); INVOLVED IN defense response to virus (ortholog); DNA deamination (ortholog); histone mRNA catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) NW_004955454 2732308 2734398 + 102021305 AGCD01045029;GBDF01053020;XM_005395841;XM_005395842 XP_005395898;XP_005395899 MODEL 8806966 pseudo LOC102023146 protein tilB homolog pseudogene NW_004955474 11766720 11768370 - 102023146 AGCD01054636 MODEL 8814551 ncrna LOC102019205 uncharacterized LOC102019205 NW_004955441 14672459 14678221 + 102019205 AGCD01037214;GBDF01176341;XR_262080 MODEL 8955668 protein-coding Slc9a5 solute carrier family 9 member A5 ENCODES a protein that exhibits arrestin family protein binding (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN proton transmembrane transport (ortholog); regulation of intracellular pH (ortholog); sodium ion transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); end stage renal disease (ortholog); FOUND IN focal adhesion (ortholog); neuron spine (ortholog); plasma membrane (ortholog) NW_004955484 9359468 9379959 - 102008225 AGCD01058415;GBDJ01263485;XM_005403668;XM_005403669;XM_013503897;XM_013503898;XM_013503899;XM_013503900;XM_013503901;XM_013503902;XM_013503903 XP_005403725;XP_005403726;XP_013359351;XP_013359352;XP_013359353;XP_013359354;XP_013359355;XP_013359356;XP_013359357 MODEL 8955571 protein-coding Bora BORA aurora kinase A activator ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN regulation of mitotic nuclear division (ortholog); regulation of mitotic spindle organization (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN meiotic spindle (ortholog) NW_004955404 33923496 33946113 - 102027935 AGCD01004084;GBBH01137438;XM_005374192;XM_005374193 XP_005374249;XP_005374250 MODEL 9003508 protein-coding Nrip3 nuclear receptor interacting protein 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955414 24716773 24737145 - 102025346 AGCD01015553;GBCE01116820;XM_005380249 XP_005380306 MODEL 8948943 protein-coding Kiaa1549l KIAA1549 like ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955422 12554879 12676904 - 102021772 AGCD01022796;AGCD01022797;GBDF01187516;XM_013514325;XM_013514326 XP_013369779;XP_013369780 MODEL 8987695 pseudo LOC102012971 spermine synthase pseudogene NW_004955422 11371620 11373194 + 102012971 AGCD01022755 MODEL 9013490 protein-coding LOC102018787 uncharacterized LOC102018787 NW_004955450 3641318 3645239 + 102018787 AGCD01042439;GBDJ01361209;XM_005393575 XP_005393632 MODEL 8841111 protein-coding LOC102021378 olfactory receptor 4A15-like NW_004955511 55303 56220 - 102021378 AGCD01066312;XM_005408175 XP_005408232 MODEL 8950165 protein-coding Fign fidgetin, microtubule severing factor ASSOCIATED WITH Developmental Disease (ortholog); melanoma (ortholog); thymoma (ortholog); FOUND IN nuclear matrix (ortholog) NW_004955449 10271125 10400631 + 102015258 AGCD01042070;AGCD01042071;AGCD01042072;GBDF01297223;XM_005393306;XM_005393307;XM_013518797 XP_005393363;XP_005393364;XP_013374251 MODEL 8985442 pseudo LOC102012628 ubiquitin-40S ribosomal protein S27a pseudogene NW_004955414 14752641 14753521 - 102012628 AGCD01015156 MODEL 9003403 ncrna LOC102022098 uncharacterized LOC102022098 NW_004955495 5175818 5177703 - 102022098 AGCD01061979;GBDF01120725;XR_001231368 MODEL 9036102 protein-coding Rab29 RAB29, member RAS oncogene family ENCODES a protein that exhibits dynein complex binding (ortholog); G protein activity (ortholog); GDP binding (ortholog); INVOLVED IN cellular detoxification (ortholog); cilium assembly (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cis-Golgi network (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955406 41452733 41468467 - 102012400 AGCD01006684;GBDI01312292;XM_005375371;XM_005375372;XM_005375373;XM_013522973;XM_013522978;XM_013522980;XM_013522983;XM_013522990 XP_005375428;XP_005375429;XP_005375430;XP_013378427;XP_013378432;XP_013378434;XP_013378437;XP_013378444 MODEL 8777594 protein-coding Six3 SIX homeobox 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN apoptotic process involved in development (ortholog); brain development (ortholog); camera-type eye development (ortholog); ASSOCIATED WITH genetic disease (ortholog); holoprosencephaly (ortholog); holoprosencephaly 2 (ortholog); FOUND IN nucleus (ortholog) NW_004955441 11966389 11978545 + 102007703 AGCD01037115;AGCD01037116;GBBH01065571;XM_005390963;XM_013517631 XP_005391020;XP_013373085 MODEL 9013373 protein-coding Lingo3 leucine rich repeat and Ig domain containing 3 ASSOCIATED WITH myoepithelioma (ortholog); thymoma (ortholog) NW_004955495 5850956 5862249 + 102013518 AGCD01062036;AGCD01062037;AGCD01062038;GBCB01056095;GBCB01056097;XM_013505232 XP_013360686 MODEL 8871258 protein-coding Scn2a sodium voltage-gated channel alpha subunit 2 ENCODES a protein that exhibits calmodulin binding (ortholog); leucine zipper domain binding (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN axon development (ortholog); cellular response to hypoxia (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); absence epilepsy (ortholog); acne (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); glutamatergic synapse (ortholog) NW_004955449 8722043 8846165 - 102012382 AGCD01042020;AGCD01042021;AGCD01042022;AGCD01042023;AGCD01042024;AGCD01042025;AGCD01042026;GBBH01055930;XM_005393295;XM_005393296;XM_005393297;XM_005393298 XP_005393352;XP_005393353;XP_005393354;XP_005393355 MODEL 8948111 protein-coding Slc25a1 solute carrier family 25 member 1 ENCODES a protein that exhibits citrate secondary active transmembrane transporter activity (ortholog); citrate:succinate antiporter activity (ortholog); tricarboxylic acid transmembrane transporter activity (ortholog); INVOLVED IN mitochondrial citrate transmembrane transport (ortholog); negative regulation of ferroptosis (ortholog); ASSOCIATED WITH 2-hydroxyglutaric aciduria (ortholog); Agenesis of Corpus Callosum (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955442 18804319 18807353 + 102011484 AGCD01038020;GBCE01076067;GBDJ01089948;XM_005391786 XP_005391843 MODEL 8813896 protein-coding Swsap1 SWIM-type zinc finger 7 associated protein 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); molecular function inhibitor activity (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN DNA recombinase assembly (ortholog); double-strand break repair involved in meiotic recombination (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Shu complex (ortholog) NW_004955495 2289401 2291184 + 102022400 AGCD01061762;GBDJ01115709;XM_005405663 XP_005405720 MODEL 39132638 snrna U6 U6 spliceosomal RNA 8987022 ncrna LOC102016044 uncharacterized LOC102016044 NW_004955469 10654826 10680135 - 102016044 AGCD01052544;GBDF01155445;XR_001236977;XR_263450 MODEL 8742739 ncrna LOC102003823 uncharacterized LOC102003823 NW_004955403 768478 771303 + 102003823 AGCD01001708;GBDI01035702;XR_259130 MODEL 8947534 protein-coding Dmtn dematin actin binding protein ENCODES a protein that exhibits actin binding (ortholog); signaling receptor binding (ortholog); spectrin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); cellular response to cAMP (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog); lung cancer (ortholog); FOUND IN actin filament (ortholog); cell projection membrane (ortholog); cortical cytoskeleton (ortholog) NW_004955403 45566180 45579062 + 102015273 AGCD01002822;AGCD01002823;GBBH01142552;GBDF01262834;XM_005373902 XP_005373959 MODEL 8892951 ncrna LOC102007893 uncharacterized LOC102007893 NW_004955417 25416076 25425950 - 102007893 AGCD01018480;GBDF01236896;XR_260494 MODEL 8965251 protein-coding Tcf7 transcription factor 7 ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); canonical Wnt signaling pathway (ortholog); cellular response to interleukin-4 (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN euchromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955408 5362423 5388684 + 102010552 AGCD01008133;GBDI01062211;GBDI01062213;XM_005376128;XM_005376129;XM_005376130;XM_005376131;XM_005376134;XM_013508459;XM_013508472;XM_013508475;XM_013508479 XP_005376185;XP_005376186;XP_005376187;XP_005376188;XP_005376191;XP_013363913;XP_013363926;XP_013363929;XP_013363933 MODEL 9034602 protein-coding Tspyl4 TSPY like 4 ASSOCIATED WITH melanoma (ortholog) NW_004955526 562891 567892 + 102011580 AGCD01069241;AGCD01069242;GBBH01061852;GBCB01020779;XM_005409782 XP_005409839 MODEL 9033332 ncrna LOC102019210 uncharacterized LOC102019210 NW_004955443 7120644 7141367 + 102019210 AGCD01038273;GBDF01245079;XR_001235484 MODEL 39133650 snrna U4 U4 spliceosomal RNA 8807198 pseudo LOC102004568 poly(A) RNA polymerase GLD2 pseudogene NW_004955458 6342070 6359704 - 102004568 AGCD01047558;AGCD01047559 MODEL 8745125 protein-coding LOC102023147 zinc finger X-linked protein ZXDB NW_004955475 3824048 3826106 + 102023147 AGCD01054856;GBBH01186410;XM_005401702 XP_005401759 MODEL 10325919 ncrna LOC106147333 uncharacterized LOC106147333 NW_004955544 2686394 2778086 - 106147333 AGCD01071739;GBCE01106175;XR_001232177 MODEL 8731555 protein-coding Laptm4b lysosomal protein transmembrane 4 beta ENCODES a protein that exhibits ceramide binding (ortholog); kinase binding (ortholog); phosphatidylinositol bisphosphate binding (ortholog); INVOLVED IN endosome organization (ortholog); endosome transport via multivesicular body sorting pathway (ortholog); negative regulation of lysosomal protein catabolic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN early endosome (ortholog); endosome (ortholog); late endosome membrane (ortholog) NW_004955417 13574493 13625669 + 102015955 AGCD01018188;AGCD01018189;GBBH01003692;GBDF01010424;XM_013512773 XP_013368227 MODEL 8919922 protein-coding Glis3 GLIS family zinc finger 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); transcription by RNA polymerase II (ortholog); ASSOCIATED WITH angle-closure glaucoma (ortholog); aniridia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN nucleus (ortholog) NW_004955434 8140965 8581889 - 102021589 AGCD01032253;AGCD01032254;AGCD01032255;AGCD01032256;AGCD01032257;AGCD01032258;AGCD01032259;AGCD01032260;AGCD01032261;GBCQ01067018;XM_005388624;XM_005388625;XM_005388628;XM_005388631;XM_005388632;XM_005388633;XM_005388635;XM_013516323;XM_013516324;XM_013516325;XM_013516326;XM_013516327 XP_005388681;XP_005388682;XP_005388685;XP_005388688;XP_005388689;XP_005388690;XP_005388692;XP_013371777;XP_013371778;XP_013371779;XP_013371780;XP_013371781 MODEL 8737535 pseudo LOC102009774 calmodulin-A pseudogene NW_004955573 459943 467278 + 102009774 AGCD01074980 MODEL 8871429 pseudo LOC102017994 olfactory receptor 7E24-like NW_004955495 730711 731673 - 102017994 AGCD01061651 MODEL 8984553 protein-coding LOC102009387 bile acid-CoA:amino acid N-acyltransferase-like NW_004955419 24443222 24466306 + 102009387 AGCD01020347;GBDJ01035584;XM_005382801;XM_013513082 XP_005382858;XP_013368536 MODEL 39133026 snrna U6 U6 spliceosomal RNA 8718124 protein-coding Cx3cl1 C-X3-C motif chemokine ligand 1 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); CX3C chemokine receptor binding (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); autocrine signaling (ortholog); cell adhesion (ortholog); ASSOCIATED WITH acute pancreatitis (ortholog); allergic disease (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog); cell surface (ortholog) NW_004955433 15023272 15034650 + 102025717 AGCD01031744;AGCD01031745;GBBH01091020;XM_005388386;XM_005388387 XP_005388443;XP_005388444 MODEL 8914173 ncrna LOC102014146 uncharacterized LOC102014146 NW_004955423 23506950 23576432 - 102014146 AGCD01024005;AGCD01024006;AGCD01024007;AGCD01024008;AGCD01024009;GBBH01072420;XR_001234109;XR_001234110;XR_001234111;XR_001234112;XR_001234113;XR_001234114;XR_260988 MODEL 8730526 protein-coding Samd8 sterile alpha motif domain containing 8 ENCODES a protein that exhibits ceramide phosphoethanolamine synthase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); ceramide phosphoethanolamine biosynthetic process (ortholog); regulation of ceramide biosynthetic process (ortholog); ASSOCIATED WITH familial hypercholesterolemia (ortholog); high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955437 16900756 16969042 - 102028336 AGCD01034718;AGCD01034719;AGCD01034720;AGCD01034721;AGCD01034722;AGCD01034723;GBDF01153789;GBDI01243361;XM_005389922 XP_005389979 MODEL 8861954 protein-coding Fignl1 fidgetin like 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex destabilizing activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA recombinase disassembly (ortholog); double-strand break repair involved in meiotic recombination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Kidney Neoplasms (ortholog); lung cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); DNA repair complex (ortholog) NW_004955456 3588190 3594559 + 102028497 AGCD01046276;AGCD01046277;GBBH01071493;XM_005396606;XM_005396607;XM_005396608;XM_013520641 XP_005396663;XP_005396664;XP_005396665;XP_013376095 MODEL 8860735 protein-coding Tfpi2 tissue factor pathway inhibitor 2 INVOLVED IN cellular response to fluid shear stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Carotid Artery Injuries (ortholog) NW_004955432 10635626 10641345 - 102010188 AGCD01030936;GBDK01006832;XM_005415328;XM_013516032 XP_005415385;XP_013371486 MODEL 8865835 protein-coding Xrcc1 X-ray repair cross complementing 1 ENCODES a protein that exhibits 3' overhang single-stranded DNA endonuclease activity (ortholog); ADP-D-ribose modification-dependent protein binding (ortholog); enzyme binding (ortholog); INVOLVED IN base-excision repair (ortholog); DNA damage response (ortholog); DNA repair (ortholog); PARTICIPATES IN base excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH 5 Alpha Fluorouracil Toxicity (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955555 1293416 1315839 - 102016958 AGCD01073070;AGCD01073071;AGCD01073072;GBDF01053241;XM_005412443;XM_005412444 XP_005412500;XP_005412501 MODEL 8875498 pseudo LOC102010575 60S ribosomal protein L19 pseudogene NW_004955414 19517744 19518919 - 102010575 AGCD01015321 MODEL 8816327 protein-coding Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 ENCODES a protein that exhibits structural constituent of postsynaptic density (ortholog); INVOLVED IN dense core granule cytoskeletal transport (ortholog); in utero embryonic development (ortholog); regulation of dendritic spine development (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955478 8370813 8757132 - 102003127 AGCD01056024;AGCD01056025;AGCD01056026;AGCD01056027;AGCD01056028;AGCD01056029;AGCD01056030;AGCD01056031;AGCD01056032;AGCD01056033;AGCD01056034;AGCD01056035;AGCD01056036;AGCD01056037;AGCD01056038;AGCD01056039;GBDF01252904;XM_005402226;XM_005402228;XM_005402229;XM_005402230;XM_005402233;XM_013503196 XP_005402283;XP_005402285;XP_005402286;XP_005402287;XP_005402290;XP_013358650 MODEL 8760438 pseudo LOC102005275 transcription factor BTF3 pseudogene NW_004955497 481788 482491 + 102005275 AGCD01062416 MODEL 8999207 protein-coding Dynap dynactin-associated protein NW_004955402 39169208 39173132 + 102026173 AGCD01000977;GBDI01343183;NM_001371758;XM_005372951 NP_001358687;XP_005373008 INFERRED 39132639 snrna U6 U6 spliceosomal RNA 8982880 protein-coding Il21r interleukin 21 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); atopic dermatitis (ortholog); B-cell lymphoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955493 5613704 5646692 + 102007025 AGCD01061071;AGCD01061072;GBDI01219894;GBDI01219902;XM_013504819 XP_013360273 MODEL 8739383 ncrna LOC102007895 uncharacterized LOC102007895 NW_004955482 3978633 3990270 + 102007895 AGCD01057276;AGCD01057277;GBDI01191861;XR_263829 MODEL 8821700 protein-coding Txnl1 thioredoxin like 1 ENCODES a protein that exhibits disulfide oxidoreductase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955402 41022771 41058731 - 102003395 AGCD01001005;AGCD01001006;AGCD01001007;GBCQ01036785;XM_005372969;XM_005372970;XR_259083 XP_005373026;XP_005373027 MODEL 8866376 protein-coding LOC102012632 olfactory receptor 52L1 NW_004955414 21869937 21870911 - 102012632 AGCD01015436;XM_005380106 XP_005380163 MODEL 10108889 ncrna LOC106147334 uncharacterized LOC106147334 NW_004955544 2976780 2997142 + 106147334 AGCD01071747;XR_001232178 MODEL 9042426 ncrna LOC102009778 uncharacterized LOC102009778 NW_004955402 5585104 5592598 - 102009778 AGCD01000137;GBDF01225737;XR_259030 MODEL 9042221 protein-coding Lrrtm3 leucine rich repeat transmembrane neuronal 3 INVOLVED IN positive regulation of amyloid-beta formation (ortholog); regulation of presynapse assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955425 19480944 19657178 + 102028314 AGCD01025692;AGCD01025693;AGCD01025694;AGCD01025695;AGCD01025696;AGCD01025697;XM_005385968 XP_005386025 MODEL 8982202 pseudo LOC102003512 60S ribosomal protein L17-like NW_004955405 31689835 31691569 + 102003512 AGCD01005302 MODEL 730469329 misc_rna Six3os1_1 Six3os1 conserved region 1 8707944 protein-coding Lingo4 leucine rich repeat and Ig domain containing 4 ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); ovarian cancer (ortholog); polymicrogyria (ortholog) NW_004955589 618959 623915 + 102013567 AGCD01076179;GBDF01150351;XM_005414547 XP_005414604 MODEL 8822511 protein-coding Tns2 tensin 2 ENCODES a protein that exhibits identical protein binding (ortholog); kinase binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cellular homeostasis (ortholog); collagen metabolic process (ortholog); kidney development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); plasma membrane (ortholog) NW_004955458 333104 347399 + 102009466 AGCD01047120;GBCQ01067839;XM_005397134;XM_005397135;XM_005397136;XM_013520873 XP_005397191;XP_005397192;XP_005397193;XP_013376327 MODEL 8855587 protein-coding Slc9a6 solute carrier family 9 member A6 ENCODES a protein that exhibits identical protein binding (ortholog); potassium:proton antiporter activity (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN axon extension (ortholog); brain-derived neurotrophic factor receptor signaling pathway (ortholog); dendrite extension (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; ASSOCIATED WITH allergic disease (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2A (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon terminus (ortholog); axonal spine (ortholog); cytoplasmic vesicle (ortholog) NW_004955489 9020719 9078375 - 102016061 AGCD01060025;GBBH01035448;XM_005404600;XM_005404602 XP_005404657;XP_005404659 MODEL 8722318 protein-coding Slc25a10 solute carrier family 25 member 10 ENCODES a protein that exhibits dicarboxylic acid transmembrane transporter activity (ortholog); malate transmembrane transporter activity (ortholog); phosphate transmembrane transporter activity (ortholog); INVOLVED IN glyceraldehyde-3-phosphate biosynthetic process (ortholog); malate transport (ortholog); phosphate ion transport (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955506 1389798 1396670 - 102028111 AGCD01065262;GBCQ01002900;XM_005407261 XP_005407318 MODEL 8720946 protein-coding Swt1 SWT1 RNA endoribonuclease homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955406 23772192 23861365 + 102007406 AGCD01006184;AGCD01006185;AGCD01006186;GBDF01080351;XM_005375066;XM_005375067;XM_005375068;XM_005375069;XM_005375070;XM_005375071;XM_013521667 XP_005375123;XP_005375124;XP_005375125;XP_005375126;XP_005375127;XP_005375128;XP_013377121 MODEL 9044978 protein-coding Nrk Nik related kinase ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); parturition (ortholog); positive regulation of JNK cascade (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955548 2675645 2797548 + 102005972 AGCD01072409;AGCD01072410;GBCQ01083473;XM_005412012 XP_005412069 MODEL 39132777 snrna U6 U6 spliceosomal RNA 8890803 ncrna LOC102019212 uncharacterized LOC102019212 NW_004955444 6086193 6102188 - 102019212 AGCD01038849;GBCB01024205;XR_262243 MODEL 39133651 snrna U4 U4 spliceosomal RNA 9063433 protein-coding Gcnt4 glucosaminyl (N-acetyl) transferase 4 INVOLVED IN homeostasis of number of cells (ortholog); inter-male aggressive behavior (ortholog); kidney morphogenesis (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955425 25661648 25681948 + 102027426 AGCD01025927;GBCQ01026024;XM_005386055;XM_005386056;XM_013514799;XM_013514800 XP_005386112;XP_005386113;XP_013370253;XP_013370254 MODEL 8855704 ncrna LOC102023148 uncharacterized LOC102023148 NW_004955477 9694302 9699057 - 102023148 AGCD01055683;GBDF01223626;XR_001230830;XR_001230831;XR_001230832 MODEL 39132285 snrna U6 U6 spliceosomal RNA 8735904 protein-coding LOC102022099 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 NW_004955423 16160378 16174472 - 102022099 AGCD01023824;GBDF01176664;XM_013514557;XM_013514558 XP_013370011;XP_013370012 MODEL 8876132 protein-coding Il22 interleukin 22 INVOLVED IN response to glucocorticoid (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); asthma (ortholog); autoimmune hepatitis (ortholog); FOUND IN decoy receptor complex (ortholog); extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955458 14747339 14755602 - 102029269 AGCD01047846;GBDF01277454;XM_005397469;XM_013520847;XM_013520848 XP_005397526;XP_013376301;XP_013376302 MODEL 8733915 pseudo LOC102025306 zinc finger and BTB domain-containing protein 44 pseudogene NW_004955600 457007 459128 + 102025306 AGCD01076723 MODEL 8702530 protein-coding Exosc5 exosome component 5 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN defense response to virus (ortholog); DNA deamination (ortholog); mRNA catabolic process (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); CEREBELLAR ATAXIA, BRAIN ABNORMALITIES, AND CARDIAC CONDUCTION DEFECTS (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); euchromatin (ortholog); exosome (RNase complex) (ortholog) NW_004955555 328130 334106 - 102017167 AGCD01073024;GBBH01163376;XM_005412347 XP_005412404 MODEL 8729190 pseudo LOC102020277 vomeronasal type-2 receptor 116-like NW_004955524 1976769 1977741 + 102020277 AGCD01068789;XM_005409480 MODEL 8730233 ncrna LOC102014148 uncharacterized LOC102014148 NW_004955423 28261530 28278611 + 102014148 AGCD01024146;XR_261015 MODEL 8754915 pseudo LOC102016048 olfactory receptor 2AT4-like NW_004955414 16709568 16712630 + 102016048 AGCD01015222 MODEL 8729703 protein-coding Fignl2 fidgetin like 2 INVOLVED IN microtubule severing (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cell leading edge (ortholog) NW_004955547 2205614 2234417 - 102016852 AGCD01072261;AGCD01072262;AGCD01072263;AGCD01072264;GBDK01115749;XM_005411962 XP_005412019 MODEL 9019917 protein-coding Kiaa1614 KIAA1614 ortholog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955406 20005261 20038783 + 102012496 AGCD01006096;GBBH01197770;GBDF01155976;XM_005374988 XP_005375045 MODEL 8854830 protein-coding Tfpt TCF3 fusion partner ENCODES a protein that exhibits DNA binding (ortholog); protein kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN actin filament (ortholog); cytoplasm (ortholog); Ino80 complex (ortholog) NW_004955604 136357 139799 + 102020864 AGCD01076864;AGCD01076865;GBBH01188177;XM_013510092 XP_013365546 MODEL 8948031 protein-coding Lins1 lines homolog 1 INVOLVED IN cognition (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 27 (ortholog); bicuspid aortic valve disease (ortholog) NW_004955416 27585172 27609780 - 102007659 AGCD01017618;GBDK01117296;XM_005381639 XP_005381696 MODEL 9045088 protein-coding Tcf7l1 transcription factor 7 like 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN anterior/posterior axis specification, embryo (ortholog); axial mesoderm morphogenesis (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955424 2139576 2286183 - 102007247 AGCD01024263;AGCD01024264;AGCD01024265;AGCD01024266;GBCQ01101669;GBDK01324721;XM_013514629 XP_013370083 MODEL 8887735 protein-coding Tango2 transport and golgi organization 2 homolog ASSOCIATED WITH Alstrom syndrome (ortholog); Ataxia (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955442 18036477 18074036 - 102026680 AGCD01037995;GBDF01086531;XM_005391746;XM_013517770;XM_013517771;XM_013517772;XM_013517773;XM_013517774;XM_013517775 XP_005391803;XP_013373224;XP_013373225;XP_013373226;XP_013373227;XP_013373228;XP_013373229 MODEL 8887401 protein-coding LOC102021380 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related-like NW_004955514 3946950 3967642 - 102021380 AGCD01067122;AGCD01067123;GBCB01073188;XM_005408817;XM_013506852;XM_013506853 XP_005408874;XP_013362306;XP_013362307 MODEL 8718318 protein-coding Dynap dynactin associated protein INVOLVED IN cellular response to ergosterol (ortholog); positive regulation of cell population proliferation (ortholog); regulation of apoptotic process (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) NW_004955402 39097723 39142938 + 102004539 AGCD01000976;AGCD01000977;XM_013510770 XP_013366224 MODEL 8837595 pseudo LOC102017996 40S ribosomal protein S15 pseudogene NW_004955423 7792117 7792604 - 102017996 AGCD01023611 MODEL 8973974 protein-coding Gtse1 G2 and S-phase expressed 1 ASSOCIATED WITH colon adenocarcinoma (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic microtubule (ortholog); plasma membrane (ortholog) NW_004955413 30414007 30438363 + 102011104 AGCD01014608;GBCE01082774;XM_013511388;XM_013511389;XM_013511390;XM_013511391 XP_013366842;XP_013366843;XP_013366844;XP_013366845 MODEL 8780559 protein-coding Rab2a RAB2A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN autophagosome membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) NW_004955444 18091640 18169971 - 102030675 AGCD01039229;GBCE01032380;XM_005392185 XP_005392242 MODEL 39133027 snrna U6 U6 spliceosomal RNA 9022173 protein-coding Smpd4 sphingomyelin phosphodiesterase 4 ENCODES a protein that exhibits sphingomyelin phosphodiesterase activity (ortholog); sphingomyelin phosphodiesterase D activity (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); ceramide biosynthetic process (ortholog); endoplasmic reticulum organization (ortholog); ASSOCIATED WITH ankyloglossia (ortholog); anxiety disorder (ortholog); Ataxia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955442 19184794 19210999 - 102018777 AGCD01038040;GBCQ01008827;XM_005391811;XM_005391812;XM_005391813 XP_005391868;XP_005391869;XP_005391870 MODEL 8776962 protein-coding Scn2b sodium voltage-gated channel beta subunit 2 ENCODES a protein that exhibits sodium channel regulator activity (ortholog); voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN cardiac conduction (ortholog); cardiac muscle cell action potential involved in contraction (ortholog); cardiac muscle contraction (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Experimental Seizures (ortholog); Familial Atrial Fibrillation 14 (ortholog); FOUND IN axon initial segment (ortholog); node of Ranvier (ortholog); plasma membrane (ortholog) NW_004955412 19341008 19353563 - 102006439 AGCD01012950;GBCE01076512;XM_005378230;XM_013511243 XP_005378287;XP_013366697 MODEL 8783087 protein-coding Cx3cr1 C-X3-C motif chemokine receptor 1 ENCODES a protein that exhibits C-X3-C chemokine binding (ortholog); C-X3-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); INVOLVED IN adaptive immune response (ortholog); antifungal innate immune response (ortholog); autocrine signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); age related macular degeneration 12 (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN cell surface (ortholog); dendritic tree (ortholog); neuronal cell body membrane (ortholog) NW_004955427 24691206 24705599 + 102024484 AGCD01027517;GBCE01117768;XM_005386557 XP_005386614 MODEL 10151691 pseudo LOC106147336 60S ribosomal protein L17 pseudogene NW_004955545 2113175 2114714 + 106147336 AGCD01071885 MODEL 8729687 protein-coding Borcs5 BLOC-1 related complex subunit 5 INVOLVED IN axon development (ortholog); lysosome localization (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN axon (ortholog); BORC complex (ortholog); cytoplasmic side of lysosomal membrane (ortholog) NW_004955413 9309766 9399378 + 102015707 AGCD01013902;AGCD01013903;GBCE01187874;XM_005378962;XM_005378964;XM_013511430;XM_013511431 XP_005379019;XP_005379021;XP_013366884;XP_013366885 MODEL 8965336 protein-coding LOC102012974 ubiquinol-cytochrome-c reductase complex assembly factor 1 INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); FOUND IN Cbp3p-Cbp6 complex (ortholog); cytoplasmic vesicle (ortholog); mitochondrial inner membrane (ortholog) NW_004955422 26009078 26096300 + 102012974 AGCD01023273;AGCD01023274;AGCD01023275;GBDF01119443;XM_005384797 XP_005384854 MODEL 9066864 protein-coding LOC102003827 beta-defensin 130-like NW_004955403 53263393 53266892 - 102003827 AGCD01003047;GBDF01142643;XM_005373831 XP_005373888 MODEL 8936476 protein-coding Dmwd DM1 locus, WD repeat containing ENCODES a protein that exhibits deubiquitinase activator activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); peptidase complex (ortholog) NW_004955574 237616 244207 - 102019970 AGCD01075093;GBCE01076103;GBDF01010547;XM_013509517 XP_013364971 MODEL 8896652 protein-coding LOC102018789 protocadherin alpha-10-like NW_004955611 330456 333750 - 102018789 AGCD01077163;XM_013510124 XP_013365578 MODEL 9010883 protein-coding Tspyl5 TSPY like 5 INVOLVED IN cellular response to gamma radiation (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog) NW_004955417 13133655 13136768 - 102008102 AGCD01018171;XM_005381841 XP_005381898 MODEL 8741032 protein-coding Xrcc2 X-ray repair cross complementing 2 ENCODES a protein that exhibits four-way junction DNA binding (ortholog); INVOLVED IN centrosome cycle (ortholog); DNA damage response (ortholog); DNA repair (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH breast cancer (ortholog); breast carcinoma (ortholog); Breast Neoplasms (ortholog); FOUND IN centrosome (ortholog); Rad51B-Rad51C-Rad51D-XRCC2 complex (ortholog); replication fork (ortholog) NW_004955491 6579443 6629410 - 102013094 AGCD01060554;AGCD01060555;AGCD01060556;AGCD01060557;GBDF01185427;XM_005404847;XM_005404851;XM_013504663;XR_001231241;XR_001231242 XP_005404904;XP_005404908;XP_013360117 MODEL 8876927 pseudo LOC102004569 60S ribosomal protein L30-like NW_004955409 9047353 9047699 - 102004569 AGCD01009428 MODEL 9039520 protein-coding Tns3 tensin 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor adaptor activity (ortholog); INVOLVED IN bone resorption (ortholog); cell migration (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN focal adhesion (ortholog); podosome (ortholog) NW_004955456 5671688 5812039 + 102009349 AGCD01046345;AGCD01046346;AGCD01046347;AGCD01046348;AGCD01046349;AGCD01046350;GBDF01126761;GBDF01126763;XM_013520558 XP_013376012 MODEL 8999129 protein-coding Slc9a7 solute carrier family 9 member A7 ENCODES a protein that exhibits potassium:proton antiporter activity (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN Golgi lumen acidification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); recycling endosome membrane (ortholog) NW_004955516 1286070 1428789 + 102025499 AGCD01067422;AGCD01067423;AGCD01067424;AGCD01067425;AGCD01067426;GBDI01080045;XM_005408973;XM_005408975 XP_005409030;XP_005409032 MODEL 39132640 snrna U6 U6 spliceosomal RNA 39132778 snrna U6 U6 spliceosomal RNA 8846396 pseudo LOC102009388 liver carboxylesterase 2-like NW_004955484 9699400 9714908 - 102009388 AGCD01058425 MODEL 8720398 protein-coding LOC102007896 olfactory receptor 1J1-like NW_004955419 5455988 5456929 + 102007896 AGCD01019810;XM_005382528 XP_005382585 MODEL 8738765 protein-coding Txnl4a thioredoxin like 4A INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Burn-McKeown syndrome (ortholog); genetic disease (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955402 63153274 63166208 + 102027802 AGCD01001661;GBDI01113001;XM_005373122;XM_013511663 XP_005373179;XP_013367117 MODEL 9010431 protein-coding LOC102012634 olfactory receptor 481 NW_004955414 23630286 23633450 + 102012634 AGCD01015508;AGCD01015509;XM_005380206 XP_005380263 MODEL 8730729 protein-coding Tango6 transport and golgi organization 6 homolog ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog) NW_004955484 7574194 7774802 - 102007899 AGCD01058339;AGCD01058340;AGCD01058341;AGCD01058342;AGCD01058343;AGCD01058344;AGCD01058345;AGCD01058346;GBCB01086514;XM_005403579;XM_013503936 XP_005403636;XP_013359390 MODEL 9017153 pseudo LOC102009783 60S ribosomal protein L23a pseudogene NW_004955402 42724840 42797870 + 102009783 AGCD01001045;AGCD01001046;AGCD01001047;AGCD01001048;AGCD01001049;XR_259084 MODEL 8923859 protein-coding Samd9 sterile alpha motif domain containing 9 INVOLVED IN endosomal vesicle fusion (ortholog); ASSOCIATED WITH Addison's disease (ortholog); Adrenal Insufficiency (ortholog); Alacrima (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955432 9957521 9972622 - 102006812 AGCD01030920;GBDK01359400;XM_005388025;XM_013516068;XM_013516069;XM_013516070;XM_013516071 XP_005388082;XP_013371522;XP_013371523;XP_013371524;XP_013371525 MODEL 9013773 protein-coding Exosc6 exosome component 6 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN DNA deamination (ortholog); isotype switching (ortholog); positive regulation of isotype switching (ortholog); FOUND IN cytosol (ortholog); exosome (RNase complex) (ortholog); nucleolus (ortholog) NW_004955484 3088133 3089551 - 102028636 AGCD01058153;AGCD01058154;GBDJ01421667;GBDK01319978;XM_013503930 XP_013359384 MODEL 8805101 protein-coding Lrrtm4 leucine rich repeat transmembrane neuronal 4 ENCODES a protein that exhibits heparan sulfate proteoglycan binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); neurotransmitter-gated ion channel clustering (ortholog); regulation of presynaptic membrane organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); melanoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955424 8606660 9277125 + 102014919 AGCD01024476;AGCD01024477;AGCD01024478;AGCD01024479;AGCD01024480;AGCD01024481;AGCD01024482;AGCD01024483;AGCD01024484;AGCD01024485;AGCD01024486;AGCD01024487;AGCD01024488;AGCD01024489;AGCD01024490;AGCD01024491;GBBH01131117;XM_005385460 XP_005385517 MODEL 8892307 protein-coding Slc25a11 solute carrier family 25 member 11 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); oxoglutarate:malate antiporter activity (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN gluconeogenesis (ortholog); malate-aspartate shuttle (ortholog); PARTICIPATES IN fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; glycogen storage disease type Ia pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); pheochromocytoma/paraganglioma syndrome 6 (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955467 10349378 10352649 - 102019491 AGCD01051561;GBCB01004634;XM_005399613;XM_005399615 XP_005399670;XP_005399672 MODEL 8842639 protein-coding LOC102020279 vomeronasal type-2 receptor 116-like NW_004955524 4032543 4049377 - 102020279 AGCD01068944;AGCD01068945;XM_013507203 XP_013362657 MODEL 8839052 ncrna LOC102016052 uncharacterized LOC102016052 NW_004955478 15350 16498 + 102016052 AGCD01055729;GBDK01097379;XR_263679 MODEL 8838960 protein-coding Filip1 filamin A interacting protein 1 INVOLVED IN cerebral cortex development (ortholog); corpus callosum development (ortholog); modification of postsynaptic structure (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN actin cytoskeleton (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) NW_004955502 3806016 3976013 - 102012981 AGCD01064322;AGCD01064323;GBBH01076633;GBCB01038385;XM_013505828;XM_013505829;XM_013505830 XP_013361282;XP_013361283;XP_013361284 MODEL 10392405 pseudo LOC106147337 FAST kinase domain-containing protein 1-like NW_004955545 302521 305066 + 106147337 AGCD01071783 MODEL 8716486 protein-coding Laptm5 lysosomal protein transmembrane 5 ENCODES a protein that exhibits enzyme binding (ortholog); protein sequestering activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); defense response to tumor cell (ortholog); Golgi to lysosome transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasmic vesicle (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) NW_004955452 9335481 9358177 - 102030146 AGCD01044236;GBDJ01075689;XM_005394999 XP_005395056 MODEL 8767907 protein-coding LOC102019219 olfactory receptor 2G2-like NW_004955581 837416 838405 + 102019219 AGCD01075698;XM_005414254 XP_005414311 MODEL 8811340 protein-coding Nrl neural retina leucine zipper ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); leucine zipper domain binding (ortholog); INVOLVED IN positive regulation of gene expression (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Albinism (ortholog); Choroidal Neovascularization (ortholog); enhanced S-cone syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955409 36279996 36313824 + 102014119 AGCD01010454;AGCD01010455;AGCD01010456;GBCB01066020;XM_005377054;XM_013510411;XM_013510412 XP_005377111;XP_013365865;XP_013365866 MODEL 8728941 protein-coding Kiaa1671 KIAA1671 ortholog ASSOCIATED WITH colorectal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cilium (ortholog) NW_004955455 53731 193113 - 102010024 AGCD01045552;AGCD01045553;GBDF01281582;XM_005396132;XM_013520403;XM_013520404;XM_013520405;XM_013520406 XP_005396189;XP_013375857;XP_013375858;XP_013375859;XP_013375860 MODEL 9041267 protein-coding Tfr2 transferrin receptor 2 ENCODES a protein that exhibits co-receptor binding (ortholog); transferrin receptor activity (ortholog); INVOLVED IN acute-phase response (ortholog); cellular response to iron ion (ortholog); endocytic iron import into cell (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); beta thalassemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasmic vesicle (ortholog); external side of plasma membrane (ortholog); HFE-transferrin receptor complex (ortholog) NW_004955573 272315 289227 + 102017520 AGCD01074972;AGCD01074973;GBDF01155965;XM_005413705;XM_005413706;XM_005413707;XM_005413708 XP_005413762;XP_005413763;XP_005413764;XP_005413765 MODEL 8985772 protein-coding LOC102023153 protein CutA homolog NW_004955419 7160868 7199480 - 102023153 AGCD01019875;GBCE01012336;XM_005382586;XM_005382587;XM_005382588;XM_005382589;XM_005382590;XM_013513213 XP_005382643;XP_005382644;XP_005382645;XP_005382646;XP_005382647;XP_013368667 MODEL 8865107 pseudo LOC102017997 RING finger and CHY zinc finger domain-containing protein 1 pseudogene NW_004955495 7385816 7387491 - 102017997 AGCD01062132 MODEL 8869259 protein-coding Tcf7l2 transcription factor 7 like 2 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); beta-catenin binding (ortholog); chromatin binding (ortholog); INVOLVED IN blood vessel development (ortholog); bone mineralization (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; pancreatic cancer pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); Animal Disease Models (ortholog); FOUND IN beta-catenin-TCF7L2 complex (ortholog); catenin-TCF7L2 complex (ortholog); chromatin (ortholog) NW_004955431 18020309 18207926 + 102003994 AGCD01030420;AGCD01030421;AGCD01030422;GBBH01150040;GBDJ01228388;XM_013515858;XM_013515859;XM_013515860;XM_013515861;XM_013515862;XM_013515863;XM_013515864;XM_013515865;XM_013515866;XM_013515867;XM_013515868 XP_013371312;XP_013371313;XP_013371314;XP_013371315;XP_013371316;XP_013371317;XP_013371318;XP_013371319;XP_013371320;XP_013371321;XP_013371322 MODEL 8977932 protein-coding LOC102021383 zinc finger protein 490-like NW_004955524 1463424 1483515 + 102021383 AGCD01068752;AGCD01068753;AGCD01068754;GBCE01072813;GBDI01292151;XM_005409482 XP_005409539 MODEL 8870766 protein-coding Dync1h1 dynein cytoplasmic 1 heavy chain 1 ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); identical protein binding (ortholog); minus-end-directed microtubule motor activity (ortholog); INVOLVED IN cellular response to 3,3',5-triiodo-L-thyronine (ortholog); cellular response to nerve growth factor stimulus (ortholog); establishment of spindle localization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955538 1388595 1458166 + 102025509 AGCD01071057;AGCD01071058;AGCD01071059;AGCD01071060;AGCD01071061;AGCD01071062;AGCD01071063;GBBH01031319;GBCB01112090;XM_013507827;XM_013507828 XP_013363281;XP_013363282 MODEL 9033470 pseudo LOC102025308 zinc finger CCHC-type and RNA-binding motif-containing protein 1 pseudogene NW_004955451 681864 682532 - 102025308 AGCD01042950 MODEL 730469113 misc_rna Six3os1_2 Six3os1 conserved region 2 8706552 pseudo LOC102010577 fatty acid-binding protein, epidermal pseudogene NW_004955414 14243606 14244127 + 102010577 AGCD01015144 MODEL 8925348 ncrna LOC102005277 uncharacterized LOC102005277 NW_004955425 6668270 6682257 - 102005277 AGCD01025372;GBDF01088350;XR_001234268;XR_001234269 MODEL 8762622 pseudo LOC102003830 lysophospholipid acyltransferase LPCAT4 pseudogene NW_004955404 19109521 19111476 - 102003830 AGCD01003637 MODEL 8845527 protein-coding Samd9l sterile alpha motif domain containing 9 like INVOLVED IN common myeloid progenitor cell proliferation (ortholog); endosomal vesicle fusion (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); Ataxia (ortholog); FOUND IN early endosome (ortholog); mitochondrion (ortholog) NW_004955432 10007631 10028989 - 102007360 AGCD01030921;AGCD01030922;AGCD01030923;GBDK01230974;XM_005388027;XM_005388029;XM_013516048;XM_013516049;XM_013516050;XM_013516051 XP_005388084;XP_005388086;XP_013371502;XP_013371503;XP_013371504;XP_013371505 MODEL 8762574 protein-coding Dmxl1 Dmx like 1 INVOLVED IN proton-transporting V-type ATPase complex assembly (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955408 38705489 38850770 + 102030283 AGCD01009052;AGCD01009053;GBCE01171850;XM_005376544;XM_013506996;XM_013507007 XP_005376601;XP_013362450;XP_013362461 MODEL 9038941 protein-coding Gcnt7 glucosaminyl (N-acetyl) transferase family member 7 ASSOCIATED WITH esophageal cancer (ortholog) NW_004955445 2737228 2750104 + 102008783 AGCD01039364;GBBH01056981;XM_005392265;XM_005392266 XP_005392322;XP_005392323 MODEL 8856266 protein-coding Lipa lipase A, lysosomal acid type ENCODES a protein that exhibits lipase activity (ortholog); sterol ester esterase activity (ortholog); INVOLVED IN acute inflammatory response (ortholog); adaptive thermogenesis (ortholog); adipose tissue development (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN lysosome (ortholog) NW_004955425 3718291 3755942 + 102017893 AGCD01025295;AGCD01025296;GBDJ01138736;XM_005385854;XM_005385855 XP_005385911;XP_005385912 MODEL 39132296 snrna U6 U6 spliceosomal RNA 8901070 protein-coding Il22ra1 interleukin 22 receptor subunit alpha 1 ENCODES a protein that exhibits interleukin-20 binding (ortholog); interleukin-22 receptor activity (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH lung cancer (ortholog); lymphoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN interleukin-20 receptor complex (ortholog); signaling receptor complex (ortholog) NW_004955452 3975597 3992809 - 102025865 AGCD01043962;GBDJ01315187;XM_005394795 XP_005394852 MODEL 39132779 snrna U6 U6 spliceosomal RNA 8713794 pseudo LOC102003513 UDP-glucuronosyltransferase 1-8-like NW_004955453 2600059 2624326 - 102003513 AGCD01044634 MODEL 39132641 snrna U6 U6 spliceosomal RNA 8787143 protein-coding Rab2b RAB2B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN defense response to virus (ortholog); Golgi organization (ortholog); innate immune response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); autophagosome membrane (ortholog); Golgi apparatus (ortholog) NW_004955550 2180326 2195523 - 102013652 AGCD01072611;GBDF01007040;XM_005412119 XP_005412176 MODEL 8815651 protein-coding Gtsf1 gametocyte specific factor 1 ENCODES a protein that exhibits tRNA binding (ortholog); INVOLVED IN piRNA-mediated gene silencing by mRNA destabilization (ortholog); secondary piRNA processing (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); piP-body (ortholog) NW_004955458 1701072 1718463 - 102007515 AGCD01047200;AGCD01047201;GBDF01007078;XM_005397225;XM_005397226;XM_005397227 XP_005397282;XP_005397283;XP_005397284 MODEL 8893790 pseudo LOC102012636 40S ribosomal protein S2 pseudogene NW_004955472 1057016 1058005 - 102012636 AGCD01053370 MODEL 9029493 pseudo LOC102014150 ribosome biogenesis protein NSA2 homolog pseudogene NW_004955424 8502072 8502854 - 102014150 AGCD01024472 MODEL 8816637 protein-coding Kiaa1755 KIAA1755 ortholog ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); prostate cancer (ortholog) NW_004955445 18461126 18497134 + 102013664 AGCD01039905;GBDF01073855;XM_005392540;XM_005392541 XP_005392597;XP_005392598 MODEL 8901481 protein-coding LOC102012975 keratin-associated protein 5-5-like NW_004955422 13414755 13423735 - 102012975 AGCD01022823;AGCD01022824;AGCD01022825;XM_013513832 XP_013369286 MODEL 8965033 protein-coding Smpdl3a sphingomyelin phosphodiesterase acid like 3A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); phosphoric diester hydrolase activity (ortholog); ribonucleoside triphosphate phosphatase activity (ortholog); INVOLVED IN negative regulation of cGAS/STING signaling pathway (ortholog); nucleoside triphosphate catabolic process (ortholog); sphingomyelin catabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); endometriosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955436 4655730 4663993 + 102027008 AGCD01033671;GBCE01075939;GBDJ01277043;XM_005389295 XP_005389352 MODEL 8800458 protein-coding Syap1 synapse associated protein 1 INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to insulin stimulus (ortholog); cellular response to insulin-like growth factor stimulus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axon (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955519 1556376 1575144 - 102007804 AGCD01067898;GBCE01069465;XM_005409147 XP_005409204 MODEL 730469391 misc_rna Six3os1_3 Six3os1 conserved region 3 9036056 protein-coding Exosc7 exosome component 7 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN RNA catabolic process (ortholog); RNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytosol (ortholog); exosome (RNase complex) (ortholog); nuclear speck (ortholog) NW_004955420 26677692 26697977 - 102010166 AGCD01021427;GBCQ01041300;XM_005383478 XP_005383535 MODEL 8968029 pseudo LOC102004571 PEST proteolytic signal-containing nuclear protein-like NW_004955409 13992640 13993276 - 102004571 AGCD01009631 MODEL 8934762 protein-coding Xrcc3 X-ray repair cross complementing 3 ENCODES a protein that exhibits crossover junction DNA endonuclease activity (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); interstrand cross-link repair (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); brain glioma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nuclear replication fork (ortholog) NW_004955538 2499297 2511898 - 102014168 AGCD01071127;AGCD01071128;GBDI01054433;XM_013507843;XM_013507844;XM_013507845;XM_013507846;XM_013507847;XM_013507848;XM_013507849;XM_013507850 XP_013363297;XP_013363298;XP_013363299;XP_013363300;XP_013363301;XP_013363302;XP_013363303;XP_013363304 MODEL 8727832 ncrna LOC102022100 uncharacterized LOC102022100 NW_004955424 1611798 1616189 + 102022100 AGCD01024240;GBBH01004877;XR_001234200;XR_261023 MODEL 8805276 protein-coding LOC102020280 ubiquitin-conjugating enzyme E2 D2-like NW_004955525 2077744 2078537 - 102020280 AGCD01069075;GBDF01157835;XM_005409731;XM_005409732 XP_005409788;XP_005409789 MODEL 8915912 protein-coding Slc9a8 solute carrier family 9 member A8 ENCODES a protein that exhibits potassium:proton antiporter activity (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN acrosome assembly (ortholog); Golgi lumen acidification (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); apical plasma membrane (ortholog); Golgi apparatus (ortholog) NW_004955445 8308847 8384146 - 102003914 AGCD01039577;AGCD01039578;AGCD01039579;AGCD01039580;GBBH01062722;GBCB01056479;XM_005392327;XM_013518263 XP_005392384;XP_013373717 MODEL 39133028 snrna U6 U6 spliceosomal RNA 8821022 pseudo LOC102007900 la-related protein 7-like NW_004955419 25039993 25040565 - 102007900 AGCD01020367 MODEL 8899838 protein-coding Nrm nurim ASSOCIATED WITH alcohol dependence (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN nuclear envelope (ortholog); nuclear inner membrane (ortholog); nuclear membrane (ortholog) NW_004955583 681543 683629 - 102005428 AGCD01075850;GBCB01088895;GBCQ01064507;XM_013509802 XP_013365256 MODEL 8729156 protein-coding LOC102019223 endothelial transcription factor GATA-2 NW_004955402 10652635 10674280 + 102019223 AGCD01000284;AGCD01000285;GBDI01323443;GBDK01085852;XM_013522231 XP_013377685 MODEL 8927430 protein-coding Scn3a sodium voltage-gated channel alpha subunit 3 ENCODES a protein that exhibits calmodulin binding (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN behavioral response to pain (ortholog); cellular response to antibiotic (ortholog); membrane depolarization during action potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN axon (ortholog); basal plasma membrane (ortholog); cytoplasm (ortholog) NW_004955449 8896454 9009304 + 102013357 AGCD01042030;AGCD01042031;XM_005393300;XM_005393301;XM_013518814 XP_005393357;XP_005393358;XP_013374268 MODEL 9018313 protein-coding Borcs6 BLOC-1 related complex subunit 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN lysosome localization (ortholog); ASSOCIATED WITH Fraser syndrome 3 (ortholog); FOUND IN BORC complex (ortholog) NW_004955467 8766322 8769169 + 102022801 AGCD01051471;GBBH01198077;XM_005399428 XP_005399485 MODEL 8724659 protein-coding LOC102009784 small proline-rich protein 2E NW_004955592 315272 316198 + 102009784 AGCD01076302;XM_005414611 XP_005414668 MODEL 8829206 protein-coding Tank TRAF family member associated NFKB activator ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activator activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to ionizing radiation (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955449 12470203 12561364 - 102024402 AGCD01042115;AGCD01042116;AGCD01042117;AGCD01042118;GBCE01008309;XM_005393341;XM_005393343;XM_013518753;XM_013518754;XM_013518755;XM_013518757;XM_013518758;XM_013518759 XP_005393398;XP_005393400;XP_013374207;XP_013374208;XP_013374209;XP_013374211;XP_013374212;XP_013374213 MODEL 8788629 pseudo LOC102018791 zinc finger and BTB domain-containing protein 16-like NW_004955670 20782 22615 - 102018791 AGCD01077935 MODEL 8923205 ncrna LOC102003516 uncharacterized LOC102003516 NW_004955456 14326450 14331839 - 102003516 AGCD01046639;GBBH01024435;XR_001236348;XR_262903 MODEL 39133652 snrna U4 U4 spliceosomal RNA 8897565 protein-coding Gtsf1l gametocyte specific factor 1 like ENCODES a protein that exhibits protein-containing complex binding (ortholog) NW_004955445 13487498 13488284 + 102024729 AGCD01039784;GBDF01004372;XM_005392494 XP_005392551 MODEL 8754221 ncrna LOC102016053 uncharacterized LOC102016053 NW_004955479 5234253 5262086 + 102016053 AGCD01056341;GBCE01048213;XR_263733;XR_263734 MODEL 8784901 protein-coding Lrsam1 leucine rich repeat and sterile alpha motif containing 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of endocytosis (ortholog); positive regulation of autophagosome assembly (ortholog); positive regulation of xenophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) NW_004955419 1121127 1154356 - 102030312 AGCD01019641;AGCD01019642;AGCD01019643;GBCQ01101040;XM_005382423;XM_013513214 XP_005382480;XP_013368668 MODEL 10297807 ncrna LOC106147338 uncharacterized LOC106147338 NW_004955408 2762457 2786387 - 106147338 AGCD01008034;GBDF01143869;XR_001232181;XR_001232182 MODEL 8928898 protein-coding Sybu syntabulin ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN anterograde neuronal dense core vesicle transport (ortholog); axonal transport of mitochondrion (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN dense body (ortholog); microtubule (ortholog); mitochondrion (ortholog) NW_004955417 16971394 17036925 - 102024673 AGCD01018279;AGCD01018280;GBCQ01153601;GBDJ01228713;XM_005381884 XP_005381941 MODEL 8828038 protein-coding LOC102009392 60S ribosomal protein L10-like NW_004955491 5944474 5944994 - 102009392 AGCD01060510;XM_005404834 XP_005404891 MODEL 9039418 protein-coding Large1 LARGE xylosyl- and glucuronyltransferase 1 ENCODES a protein that exhibits glucuronosyltransferase activity (ortholog); glycosyltransferase activity (ortholog); hexosyltransferase activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); astrocyte differentiation (ortholog); basement membrane organization (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); congenital muscular dystrophy-dystroglycanopathy type A1 (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); neuromuscular junction (ortholog) NW_004955405 41891430 42225066 - 102004669 AGCD01005567;AGCD01005568;AGCD01005569;AGCD01005570;AGCD01005571;AGCD01005572;AGCD01005573;AGCD01005574;AGCD01005575;AGCD01005576;AGCD01005577;AGCD01005578;GBBH01110525;GBCB01058063;XM_005374653 XP_005374710 MODEL 39132297 snrna U6 U6 spliceosomal RNA 9038613 protein-coding LOC102023155 olfactory receptor 50-like NW_004955419 5473161 5474099 - 102023155 AGCD01019813;XM_013513119 XP_013368573 MODEL 8938464 protein-coding Glmn glomulin, FKBP associated protein ENCODES a protein that exhibits hepatocyte growth factor receptor binding (ortholog); signaling receptor binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); circulatory system development (ortholog); epigenetic regulation of gene expression (ortholog); ASSOCIATED WITH arteriovenous malformation (ortholog); Blue Rubber Bleb Nevus Syndrome (ortholog); breast carcinoma (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) NW_004955423 2195428 2233389 + 102023275 AGCD01023470;GBCQ01151919;XM_005385048;XM_013514525;XM_013514526;XM_013514527;XM_013514528;XM_013514529;XM_013514530 XP_005385105;XP_013369979;XP_013369980;XP_013369981;XP_013369982;XP_013369983;XP_013369984 MODEL 9011363 pseudo LOC102021386 serine/threonine-protein phosphatase 4 regulatory subunit 3B pseudogene NW_004955531 3483082 3485616 + 102021386 AGCD01070075;XM_005410142 MODEL 8961726 protein-coding Cxadr CXADR cell adhesion molecule ENCODES a protein that exhibits beta-catenin binding (ortholog); cell adhesion molecule binding (ortholog); connexin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); AV node cell to bundle of His cell communication (ortholog); AV node cell-bundle of His cell adhesion involved in cell communication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN acrosomal vesicle (ortholog); adherens junction (ortholog); apicolateral plasma membrane (ortholog) NW_004955407 18894853 18927129 + 102005228 AGCD01007289;GBCE01142120;GBDJ01239347;XM_013503863;XM_013503866 XP_013359317;XP_013359320 MODEL 8842406 protein-coding Tsr1 TSR1 ribosome maturation factor ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955481 907441 919613 + 102010367 AGCD01056816;GBDF01127365;XM_005402590 XP_005402647 MODEL 8702540 protein-coding Il22ra2 interleukin 22 receptor subunit alpha 2 ENCODES a protein that exhibits interleukin-22 binding (ortholog); interleukin-22 receptor activity (ortholog); INVOLVED IN negative regulation of inflammatory response (ortholog); ASSOCIATED WITH multisystem inflammatory syndrome in children (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); decoy receptor complex (ortholog) NW_004955436 22208267 22219667 + 102019953 AGCD01034087;XM_005389281 XP_005389338 MODEL 8873880 protein-coding Dync1i1 dynein cytoplasmic 1 intermediate chain 1 ENCODES a protein that exhibits dynein light chain binding (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN intracellular transport of virus (ortholog); vesicle transport along microtubule (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN axon cytoplasm (ortholog); cytoplasm (ortholog); cytoplasmic dynein complex (ortholog) NW_004955432 12383582 12657491 + 102018961 AGCD01030978;AGCD01030979;AGCD01030980;AGCD01030981;AGCD01030982;AGCD01030983;AGCD01030984;AGCD01030985;AGCD01030986;GBDF01161863;GBDI01243738;XM_013516078 XP_013371532 MODEL 8981767 protein-coding LOC102014151 uncharacterized LOC102014151 NW_004955497 4505827 4537655 + 102014151 AGCD01062577;AGCD01062578;AGCD01062579;GBDF01128812;XM_013505451 XP_013360905 MODEL 9058373 protein-coding LOC102003832 UDP-glucuronosyltransferase 1-8-like NW_004955453 2647244 2648138 - 102003832 AGCD01044635;GBDJ01098935;XM_005395700 XP_005395757 MODEL 8833039 protein-coding LOC102012976 guanylate-binding protein 6 NW_004955423 5080353 5100169 - 102012976 AGCD01023554;AGCD01023555;GBCQ01164165;XM_005385101;XM_005385102;XM_005385103 XP_005385158;XP_005385159;XP_005385160 MODEL 8713571 protein-coding Filip1l filamin A interacting protein 1 like INVOLVED IN connective tissue replacement involved in inflammatory response wound healing (ortholog); fatty acid metabolic process (ortholog); gene expression (ortholog); FOUND IN centrosome (ortholog) NW_004955427 1386163 1641985 - 102019187 AGCD01026873;AGCD01026874;AGCD01026875;AGCD01026876;AGCD01026877;AGCD01026878;AGCD01026879;GBDK01232581;XM_005386289;XM_013515090 XP_005386346;XP_013370544 MODEL 9018738 protein-coding Smpdl3b sphingomyelin phosphodiesterase acid like 3B ENCODES a protein that exhibits phosphoric diester hydrolase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN lipid catabolic process (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of toll-like receptor signaling pathway (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955452 7114746 7138924 + 102011498 AGCD01044133;AGCD01044134;AGCD01044135;AGCD01044136;GBDK01112309;XM_005394936;XM_013519538;XM_013519539 XP_005394993;XP_013374992;XP_013374993 MODEL 8920097 protein-coding Gcsam germinal center associated signaling and motility ENCODES a protein that exhibits actin binding (ortholog); myosin II binding (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of lymphocyte migration (ortholog); regulation of B cell receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) NW_004955427 12524261 12533773 - 102025142 AGCD01027218;GBDI01086335;XM_013515053 XP_013370507 MODEL 8728526 protein-coding Txnl4b thioredoxin like 4B ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN nucleoplasm (ortholog); U12-type precatalytic spliceosome (ortholog) NW_004955484 4744620 4752737 - 102018603 AGCD01058231;AGCD01058232;GBCQ01127033;XM_005403531 XP_005403588 MODEL 8992610 pseudo LOC102018000 DCN1-like protein 4 NW_004955424 950236 952921 + 102018000 AGCD01024225 MODEL 8723332 protein-coding Tfrc transferrin receptor ENCODES a protein that exhibits double-stranded RNA binding (ortholog); Hsp70 protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN acute-phase response (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN forkhead class A signaling pathway; hypoxia inducible factor pathway; iron uptake pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Acute-Phase Reaction (ortholog); Arenaviridae infectious disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); clathrin-coated pit (ortholog) NW_004955420 12348392 12372714 - 102008628 AGCD01020861;GBCB01056114;GBCQ01039332;XM_005383119 XP_005383176 MODEL 8881412 protein-coding Lipc lipase C, hepatic type ENCODES a protein that exhibits acetylesterase activity (ortholog); acyltransferase activity (ortholog); apolipoprotein binding (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to hormone stimulus (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH Albuminuria (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); extracellular region (ortholog) NW_004955450 15947869 16062449 - 102016439 AGCD01042826;AGCD01042827;AGCD01042828;AGCD01042829;GBCE01092534;XM_005393838;XM_005393839;XM_005393840 XP_005393895;XP_005393896;XP_005393897 MODEL 8982989 protein-coding Tcfl5 transcription factor like 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of cell differentiation (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); neuronal ceroid lipofuscinosis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955528 1269387 1286124 + 102011695 AGCD01069558;GBBH01127316;GBDF01003851;XM_005410055;XM_013507458;XM_013507459;XM_013507460;XM_013507461;XM_013507462;XM_013507463 XP_005410112;XP_013362912;XP_013362913;XP_013362914;XP_013362915;XP_013362916;XP_013362917 MODEL 8937212 ncrna LOC102025311 uncharacterized LOC102025311 NW_004955731 721 6575 - 102025311 AGCD01078225;GBDJ01142499;XR_001232594 MODEL 8762046 ncrna LOC102007901 uncharacterized LOC102007901 NW_004955485 9441277 9448021 + 102007901 AGCD01058766;GBDF01017147;XR_263934;XR_263935 MODEL 39132642 snrna U6 U6 spliceosomal RNA 8920865 ncrna LOC102010579 uncharacterized LOC102010579 NW_004955416 6320380 6345046 + 102010579 AGCD01016940;AGCD01016941;XR_260358 MODEL 8709250 ncrna LOC102009395 uncharacterized LOC102009395 NW_004955422 28736276 28739914 + 102009395 AGCD01023368;GBDF01220110;XR_260928 MODEL 8965695 protein-coding Rab30 RAB30, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN Golgi organization (ortholog); lipid homeostasis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN autolysosome membrane (ortholog); autophagosome membrane (ortholog); cis-Golgi network (ortholog) NW_004955414 9497276 9582747 + 102028176 AGCD01015027;AGCD01015028;GBCE01114038;XM_005379804;XM_005379805;XM_005379807;XM_013512054 XP_005379861;XP_005379862;XP_005379864;XP_013367508 MODEL 9062876 pseudo LOC102005282 uncharacterized protein C8orf59 homolog NW_004955429 2855876 2858540 - 102005282 AGCD01028442 MODEL 9055161 protein-coding Slc25a12 solute carrier family 25 member 12 ENCODES a protein that exhibits 3-sulfino-L-alanine: proton, glutamate antiporter activity (ortholog); acidic amino acid transmembrane transporter activity (ortholog); aspartate:glutamate, proton antiporter activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); intracellular glutamate homeostasis (ortholog); L-glutamate transmembrane transport (ortholog); PARTICIPATES IN argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; citrullinemia pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Asperger syndrome (ortholog); autistic disorder (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955449 3093603 3182513 + 102017288 AGCD01041845;GBCQ01007693;GBDJ01025625;XM_005393225 XP_005393282 MODEL 8717311 protein-coding Tns4 tensin 4 INVOLVED IN intracellular protein localization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog) NW_004955451 15036773 15053199 - 102014200 AGCD01043593;GBBH01062587;XM_005394360;XM_013519361;XM_013519362;XR_001235981 XP_005394417;XP_013374815;XP_013374816 MODEL 730469381 misc_rna Six3os1_4 Six3os1 conserved region 4 9035854 protein-coding Kiaa1958 KIAA1958 ortholog ASSOCIATED WITH COVID-19 (ortholog); head and neck squamous cell carcinoma (ortholog); stomach cancer (ortholog) NW_004955419 14756207 14822763 - 102003657 AGCD01020044;GBDF01039862;XM_005382702;XM_005382704;XM_013513274 XP_005382759;XP_005382761;XP_013368728 MODEL 8975249 ncrna LOC102003519 uncharacterized LOC102003519 NW_004955459 3020453 3021512 - 102003519 AGCD01048006;GBDF01017116;XR_263011 MODEL 9030869 protein-coding Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 ENCODES a protein that exhibits deoxynucleoside triphosphate hydrolase activity (ortholog); dGTP binding (ortholog); dGTPase activity (ortholog); INVOLVED IN dATP catabolic process (ortholog); defense response to virus (ortholog); deoxyribonucleotide catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 5 (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955422 24714103 24780672 + 102028206 AGCD01023230;AGCD01023231;AGCD01023232;AGCD01023233;AGCD01023234;AGCD01023235;GBBH01005982;GBDF01177065;XM_013514015 XP_013369469 MODEL 9016895 protein-coding Exosc8 exosome component 8 ENCODES a protein that exhibits identical protein binding (ortholog); mRNA 3'-UTR AU-rich region binding (ortholog); RNA exonuclease activity (ortholog); INVOLVED IN RNA catabolic process (ortholog); RNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); exosome (RNase complex) (ortholog) NW_004955431 9048210 9058079 - 102024367 AGCD01030154;GBDF01085255;XM_005387665;XM_005387666 XP_005387722;XP_005387723 MODEL 9047769 protein-coding Dmxl2 Dmx like 2 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN brain development (ortholog); chemical synaptic transmission (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); autism spectrum disorder (ortholog); FOUND IN neuronal dense core vesicle (ortholog); synaptic vesicle (ortholog) NW_004955409 2934755 3089572 + 102022570 AGCD01009230;AGCD01009231;AGCD01009232;AGCD01009233;AGCD01009234;GBBH01193605;GBDF01085229;XM_005376642 XP_005376699 MODEL 9027013 ncrna LOC102022102 uncharacterized LOC102022102 NW_004955424 22345842 22349200 - 102022102 AGCD01024963;GBDF01279008;XR_261101 MODEL 8703254 pseudo LOC102020282 serine/threonine-protein kinase N2-like NW_004955529 1397769 1402834 + 102020282 AGCD01069683 MODEL 8853259 protein-coding LOC102004573 protein-glutamine gamma-glutamyltransferase K NW_004955409 36071919 36100923 + 102004573 AGCD01010441;AGCD01010442;AGCD01010443;GBDI01026416;GBDK01309878;XM_005377020 XP_005377077 MODEL 8825644 protein-coding Slc9a9 solute carrier family 9 member A9 ENCODES a protein that exhibits potassium:proton antiporter activity (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); phagosome maturation (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); early phagosome (ortholog) NW_004955508 2060078 2671792 + 102009524 AGCD01065779;AGCD01065780;AGCD01065781;AGCD01065782;AGCD01065783;AGCD01065784;AGCD01065785;AGCD01065786;AGCD01065787;AGCD01065788;AGCD01065789;AGCD01065790;AGCD01065791;GBDF01114325;XM_005407728;XM_005407729;XM_005407730 XP_005407785;XP_005407786;XP_005407787 MODEL 39132780 snrna U6 U6 spliceosomal RNA 8753713 protein-coding Syce1 synaptonemal complex central element protein 1 ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN central element (ortholog); chromosome (ortholog); nucleus (ortholog) NW_004955507 6263070 6271289 + 102025489 AGCD01065700;GBDF01008401;XM_005407702;XM_005407703 XP_005407759;XP_005407760 MODEL 8994134 protein-coding Tg thyroglobulin ENCODES a protein that exhibits anion binding (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to genistein (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); iodide transport (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcoholic liver cirrhosis (ortholog); Animal Disease Models (ortholog); FOUND IN extracellular region (ortholog); perinuclear region of cytoplasm (ortholog); protein-containing complex (ortholog) NW_004955461 7487268 7703458 + 102014754 AGCD01048919;AGCD01048920;AGCD01048921;GBDI01018076;XM_005398023 XP_005398080 MODEL 8868220 pseudo LOC102023157 C-Myc-binding protein pseudogene NW_004955486 9448816 9449441 - 102023157 AGCD01059186 MODEL 8731398 pseudo LOC102009787 glucose 1,6-bisphosphate synthase pseudogene NW_004955402 47456121 47465974 - 102009787 AGCD01001183;AGCD01001184;AGCD01001185;AGCD01001186;AGCD01001187 MODEL 8709873 protein-coding Borcs7 BLOC-1 related complex subunit 7 INVOLVED IN axon development (ortholog); lysosome localization (ortholog); motor behavior (ortholog); ASSOCIATED WITH hereditary spastic paraplegia (ortholog); neuroaxonal dystrophy (ortholog); schizophrenia (ortholog); FOUND IN BORC complex (ortholog); lysosome (ortholog) NW_004955485 7605277 7615924 - 102010267 AGCD01058665;GBCB01024707;XM_005403820 XP_005403877 MODEL 9017327 protein-coding Glmp glycosylated lysosomal membrane protein INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); protein localization to lysosome (ortholog); protein stabilization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN cytosol (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) NW_004955545 2436718 2439988 - 102025290 AGCD01071901;GBCB01004999;XM_005411669 XP_005411726 MODEL 39133653 snrna U4 U4 spliceosomal RNA 8869911 protein-coding Tsr2 TSR2 ribosome maturation factor ASSOCIATED WITH Diamond-Blackfan anemia 14 with mandibulofacial dysostosis (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955475 1698926 1703404 + 102022384 AGCD01054758;GBCQ01101886;XM_005401522;XM_013502825 XP_005401579;XP_013358279 MODEL 9000781 protein-coding Taok1 TAO kinase 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); kinase activity (ortholog); INVOLVED IN central nervous system neuron development (ortholog); DNA damage response (ortholog); execution phase of apoptosis (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN cytosol (ortholog); microtubule cytoskeleton (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955481 3698686 3836209 - 102008414 AGCD01056913;AGCD01056914;AGCD01056915;AGCD01056916;AGCD01056917;GBBH01160616;GBDK01127204;XM_013503358 XP_013358812 MODEL 9049138 protein-coding Xrcc4 X-ray repair cross complementing 4 ENCODES a protein that exhibits 3' overhang single-stranded DNA endonuclease activity (ortholog); DNA binding (ortholog); enzyme activator activity (ortholog); INVOLVED IN base-excision repair (ortholog); cellular response to lithium ion (ortholog); central nervous system development (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); condensed chromosome (ortholog) NW_004955418 27174510 27426245 - 102010162 AGCD01019404;AGCD01019405;AGCD01019406;AGCD01019407;AGCD01019408;GBCE01069514;XM_005382305;XM_005382306 XP_005382362;XP_005382363 MODEL 8751815 pseudo LOC102016054 60S ribosomal protein L10a pseudogene NW_004955418 1075870 1076520 + 102016054 AGCD01018708 MODEL 39133029 snrna U6 U6 spliceosomal RNA 10192355 ncrna LOC106147339 uncharacterized LOC106147339 NW_004955545 1764525 1768672 - 106147339 AGCD01071869;GBCQ01012353;XR_001232184 MODEL 9022740 protein-coding Nrn1 neuritin 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN nervous system development (ortholog); neuron projection extension (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); melanoma (ortholog); stomach cancer (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); extracellular region (ortholog); glutamatergic synapse (ortholog) NW_004955465 7703301 7711927 + 102007205 AGCD01050465;GBBH01067675;XM_005398874 XP_005398931 MODEL 8908863 protein-coding Kiaa2012 KIAA2012 ortholog ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog) NW_004955457 12558341 12697528 - 102008187 AGCD01047020;AGCD01047021;AGCD01047022;AGCD01047023;AGCD01047024;AGCD01047025;GBBH01151598;XM_005397059;XM_013520727;XM_013520728;XM_013520729 XP_005397116;XP_013376181;XP_013376182;XP_013376183 MODEL 39132299 snrna U6 U6 spliceosomal RNA 8885648 ncrna LOC102012639 uncharacterized LOC102012639 NW_004955415 32915416 32918889 - 102012639 AGCD01016740;GBBH01160712;XR_260334 MODEL 8737414 ncrna LOC102018002 uncharacterized LOC102018002 NW_004955425 14697359 14703469 + 102018002 AGCD01025567;GBDF01279132;XR_261143 MODEL 8957477 protein-coding LOC102019224 zinc finger protein 627-like NW_004955599 9018 47613 + 102019224 AGCD01076609;AGCD01076610;AGCD01076611;AGCD01076612;AGCD01076613;AGCD01076614;GBCQ01009278;XM_013510036 XP_013365490 MODEL 8959231 protein-coding Large2 LARGE xylosyl- and glucuronyltransferase 2 ENCODES a protein that exhibits dystroglycan binding (ortholog); glucuronosyltransferase activity (ortholog); glycosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955422 2045986 2052086 - 102007785 AGCD01022476;AGCD01022477;GBCE01183052;GBDJ01181464;XM_005384944 XP_005385001 MODEL 8970537 protein-coding Scn3b sodium voltage-gated channel beta subunit 3 ENCODES a protein that exhibits sodium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); voltage-gated sodium channel activity involved in cardiac muscle cell action potential (ortholog); INVOLVED IN atrial cardiac muscle cell action potential (ortholog); cardiac conduction (ortholog); cardiac muscle cell action potential involved in contraction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); brain edema (ortholog); Breast Cancer, Familial (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated sodium channel complex (ortholog); Z disc (ortholog) NW_004955412 24391764 24412912 - 102025668 AGCD01013112;AGCD01013113;GBCB01027943;XM_005378393;XM_005378394;XM_005378395 XP_005378450;XP_005378451;XP_005378452 MODEL 8912072 pseudo LOC102018795 aldose reductase-related protein 2 pseudogene NW_004955404 10139110 10140052 + 102018795 AGCD01003376 MODEL 8722933 ncrna LOC102021390 uncharacterized LOC102021390 NW_004955539 3561889 3568046 + 102021390 AGCD01071257;GBDI01058745;XR_264814 MODEL 9002026 protein-coding LOC102025314 keratin-associated protein 4-7-like NW_004955451 15520664 15521510 - 102025314 AGCD01043612;AGCD01043613;XM_013519127 XP_013374581 MODEL 8982558 protein-coding Kiaa2013 KIAA2013 ortholog ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955486 1996057 2002308 + 102018735 AGCD01058978;AGCD01058979;GBBH01034213;XM_005404300 XP_005404357 MODEL 8734119 protein-coding Il23a interleukin 23 subunit alpha ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-23 receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); defense response to Gram-negative bacterium (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH Amebic Liver Abscess (ortholog); Animal Toxoplasmosis (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog); interleukin-23 complex (ortholog); interleukin-23 receptor complex (ortholog) NW_004955458 3946964 3949180 + 102008189 AGCD01047355;GBDF01073810;XM_005397309 XP_005397366 MODEL 8907125 pseudo LOC102014153 protein S100-A10-like NW_004955426 7177248 7177540 - 102014153 AGCD01026186 MODEL 8911053 ncrna LOC102003836 uncharacterized LOC102003836 NW_004955407 41449979 41453452 + 102003836 AGCD01007866;XR_259639 MODEL 9054769 protein-coding Slc25a13 solute carrier family 25 member 13 ENCODES a protein that exhibits 3-sulfino-L-alanine: proton, glutamate antiporter activity (ortholog); acidic amino acid transmembrane transporter activity (ortholog); aspartate:glutamate, proton antiporter activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); ATP biosynthetic process (ortholog); cellular respiration (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult-onset type II citrullinemia (ortholog); Bone Fractures (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955432 12685253 12788307 - 102029430 AGCD01030990;AGCD01030991;AGCD01030992;GBDI01262669;GBDJ01025645;XM_013515919 XP_013371373 MODEL 8836409 protein-coding Guca1a guanylate cyclase activator 1A ENCODES a protein that exhibits calcium sensitive guanylate cyclase activator activity (ortholog); guanylate cyclase activator activity (ortholog); guanylate cyclase regulator activity (ortholog); INVOLVED IN cone photoresponse recovery (ortholog); phototransduction (ortholog); positive regulation of guanylate cyclase activity (ortholog); ASSOCIATED WITH cone-rod dystrophy 14 (ortholog); retinitis pigmentosa (ortholog); FOUND IN cone photoreceptor outer segment (ortholog); photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog) NW_004955437 8370553 8382640 + 102021042 AGCD01034487;AGCD01034488;GBDF01039334;XM_005389716;XM_013516787 XP_005389773;XP_013372241 MODEL 9068054 protein-coding Smpx small muscle protein X-linked ASSOCIATED WITH Distal Myopathy 7 (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN contractile muscle fiber (ortholog); costamere (ortholog); cytoplasm (ortholog) NW_004955509 2043854 2185294 - 102010078 AGCD01065988;AGCD01065989;AGCD01065990;AGCD01065991;AGCD01065992;GBCB01004982;XM_005407820;XM_005407822;XM_005407823;XM_013506295 XP_005407877;XP_005407879;XP_005407880;XP_013361749 MODEL 8882152 ncrna LOC102020283 uncharacterized LOC102020283 NW_004955436 22200426 22209843 - 102020283 AGCD01034087;GBCC01021982;XR_261808 MODEL 8887962 protein-coding Dna2 DNA replication helicase/nuclease 2 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); 5'-flap endonuclease activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN base-excision repair (ortholog); DNA double-strand break processing (ortholog); DNA replication (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 6 (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955425 20664412 20705070 - 102009079 AGCD01025752;AGCD01025753;GBDF01307460;XM_013514832;XM_013514833;XM_013514834 XP_013370286;XP_013370287;XP_013370288 MODEL 8950006 protein-coding Txnrd1 thioredoxin reductase 1 ENCODES a protein that exhibits FAD binding (ortholog); identical protein binding (ortholog); mercury ion binding (ortholog); INVOLVED IN benzene-containing compound metabolic process (ortholog); cell population proliferation (ortholog); cellular response to copper ion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoma (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuronal cell body (ortholog) NW_004955405 38863762 38928615 + 102011080 AGCD01005490;AGCD01005491;AGCD01005492;AGCD01005493;GBBH01061857;XM_005374593;XM_013518908;XM_013518916;XM_013518927 XP_005374650;XP_013374362;XP_013374370;XP_013374381 MODEL 39132781 snrna U6 U6 spliceosomal RNA 8958203 protein-coding Lipe lipase E, hormone sensitive type ENCODES a protein that exhibits all-trans-retinyl-palmitate hydrolase, all-trans-retinol forming activity (ortholog); diacylglycerol lipase activity (ortholog); hydrolase activity, acting on ester bonds (ortholog); INVOLVED IN cellular response to cold (ortholog); diacylglycerol catabolic process (ortholog); ether lipid metabolic process (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); familial partial lipodystrophy (ortholog); familial partial lipodystrophy type 6 (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); lipid droplet (ortholog) NW_004955555 511085 531165 + 102019855 AGCD01073035;GBDF01048257;XM_005412353;XM_013508677;XM_013508678;XM_013508679 XP_005412410;XP_013364131;XP_013364132;XP_013364133 MODEL 9066928 protein-coding LOC102007904 C-C chemokine receptor type 1-like NW_004955420 25908976 25909943 + 102007904 AGCD01021382;XM_013513596 XP_013369050 MODEL 39132644 snrna U6 U6 spliceosomal RNA 8951388 ncrna LOC102010581 uncharacterized LOC102010581 NW_004955478 6558216 6561171 + 102010581 AGCD01055900;GBDF01140094;XR_001230864;XR_263703 MODEL 8857548 pseudo LOC102009396 kinesin-associated protein 3 pseudogene NW_004955422 9676287 9678648 + 102009396 AGCD01022717 MODEL 8859943 protein-coding Lrtm1 leucine rich repeat transmembrane protein 1 INVOLVED IN positive regulation of synapse assembly (ortholog) NW_004955430 4784643 4794318 - 102006154 AGCD01029249;GBDI01251545;XM_005387378 XP_005387435 MODEL 8975973 pseudo LOC102005284 olfactory receptor 5B3-like NW_004955511 3132708 3133618 - 102005284 AGCD01066444 MODEL 8920441 ncrna LOC102012977 uncharacterized LOC102012977 NW_004955495 5748410 5760737 - 102012977 AGCD01062024;AGCD01062025;AGCD01062026;GBCB01002782;XR_001231365 MODEL 730468978 misc_rna Six3os1_5 Six3os1 conserved region 5 39133655 snrna U4 U4 spliceosomal RNA 8799509 protein-coding Gcsaml germinal center associated signaling and motility like ASSOCIATED WITH thymoma (ortholog); uterine carcinosarcoma (ortholog) NW_004955581 770356 803012 + 102026371 AGCD01075694;AGCD01075695;AGCD01075696;GBDK01432789;XM_013509730 XP_013365184 MODEL 8705314 protein-coding Samm50 SAMM50 sorting and assembly machinery component INVOLVED IN cristae formation (ortholog); protein import into mitochondrial matrix (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955413 28901124 28925093 + 102020647 AGCD01014572;GBDF01046690;XM_005379452 XP_005379509 MODEL 8983196 protein-coding Exosc9 exosome component 9 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); RNA exonuclease activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN mRNA catabolic process (ortholog); nuclear mRNA surveillance (ortholog); nuclear polyadenylation-dependent rRNA catabolic process (ortholog); ASSOCIATED WITH atrial heart septal defect (ortholog); blepharophimosis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); exosome (RNase complex) (ortholog) NW_004955428 18732733 18743743 - 102018750 AGCD01028069;GBDI01225849;XM_005386784 XP_005386841 MODEL 8806450 protein-coding Tsr3 TSR3 ribosome maturation factor ENCODES a protein that exhibits rRNA small subunit aminocarboxypropyltransferase activity (ortholog); transferase activity (ortholog); INVOLVED IN enzyme-directed rRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); genetic disease (ortholog) NW_004955442 15881663 15884222 + 102007944 AGCD01037884;GBBH01118537;XM_005391578 XP_005391635 MODEL 8794461 protein-coding Fimp1 fertilization-influencing membrane protein 1 INVOLVED IN fertilization (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog) NW_004955493 6940226 6941290 - 102025918 AGCD01061149;GBDF01193215;XM_005405200 XP_005405257 MODEL 8884664 protein-coding Tchh trichohyalin ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN intermediate filament organization (ortholog); ASSOCIATED WITH Uncombable Hair Syndrome (ortholog); Uncombable Hair Syndrome 3 (ortholog) NW_004955589 293887 302128 + 102009782 AGCD01076163;AGCD01076164;GBCB01009402;XM_013509955 XP_013365409 MODEL 9052859 protein-coding Slc9b1 solute carrier family 9 member B1 INVOLVED IN flagellated sperm motility (ortholog); regulation of intracellular pH (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); sperm principal piece (ortholog) NW_004955496 5586836 5637550 + 102014260 AGCD01062355;GBDF01050817;XM_005406240;XM_005406242;XM_013505380 XP_005406297;XP_005406299;XP_013360834 MODEL 8865878 protein-coding Dync1i2 dynein cytoplasmic 1 intermediate chain 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); negative regulation of neuron projection development (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoplasmic dynein complex (ortholog) NW_004955449 3204839 3256059 - 102018042 AGCD01041845;AGCD01041846;GBDJ01007532;XM_005393228;XM_005393230;XM_005393231;XM_013518773;XM_013518774 XP_005393285;XP_005393287;XP_005393288;XP_013374227;XP_013374228 MODEL 8717636 protein-coding Syce1l synaptonemal complex central element protein 1 like ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955522 469418 480090 + 102023628 AGCD01068345;AGCD01068346;GBDF01083831;GBDF01083833;XM_013507106 XP_013362560 MODEL 8757432 protein-coding LOC102012640 cystatin-SA NW_004955415 30607068 30613196 - 102012640 AGCD01016666;XM_005381141 XP_005381198 MODEL 9003407 protein-coding Rab31 RAB31, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); Golgi to plasma membrane protein transport (ortholog); Golgi vesicle transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); early phagosome membrane (ortholog) NW_004955402 2354399 2446537 - 102022140 AGCD01000076;AGCD01000077;AGCD01000078;AGCD01000079;GBDF01081715;XM_005372596;XM_013515338 XP_005372653;XP_013370792 MODEL 8918055 protein-coding Borcs8 BLOC-1 related complex subunit 8 INVOLVED IN heart development (ortholog); ASSOCIATED WITH NEURODEGENERATION, INFANTILE-ONSET, WITH OPTIC ATROPHY AND BRAIN ABNORMALITIES (ortholog); FOUND IN BORC complex (ortholog) NW_004955524 2641907 2646275 + 102008656 AGCD01068827;GBDF01046628;XM_005409618;XM_005409619;XM_013507215 XP_005409675;XP_005409676;XP_013362669 MODEL 9067132 ncrna LOC102021391 uncharacterized LOC102021391 NW_004955542 1478570 1495492 + 102021391 AGCD01071504;GBCE01185531;XR_001232169;XR_001232170;XR_264854;XR_264855 MODEL 9023752 protein-coding LOC102023163 zinc finger protein 121-like NW_004955495 1204073 1216340 + 102023163 AGCD01061675;GBDF01156005;XM_005405568 XP_005405625 MODEL 8794239 ncrna LOC102018796 uncharacterized LOC102018796 NW_004955405 8543243 8547181 - 102018796 AGCD01004747;GBDF01238909;XR_259364 MODEL 8952004 protein-coding Larp1 La ribonucleoprotein 1, translational regulator ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to rapamycin (ortholog); mRNA stabilization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955408 9002443 9080938 + 102004565 AGCD01008230;AGCD01008231;AGCD01008232;GBDF01306301;XM_013508665;XM_013508667;XM_013508668;XM_013508671;XM_013508674 XP_013364119;XP_013364121;XP_013364122;XP_013364125;XP_013364128 MODEL 9009240 protein-coding Tgds TDP-glucose 4,6-dehydratase ENCODES a protein that exhibits dTDP-glucose 4,6-dehydratase activity (ortholog); UDP-glucose 4,6-dehydratase activity (ortholog); INVOLVED IN glycosaminoglycan biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Catel Manzke syndrome (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955404 15279956 15298295 + 102027604 AGCD01003541;GBCE01123205;XM_005374111;XM_005374112;XM_005374113;XM_013516287 XP_005374168;XP_005374169;XP_005374170;XP_013371741 MODEL 8759131 protein-coding Glo1 glyoxalase I ENCODES a protein that exhibits lactoylglutathione lyase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN glutathione metabolic process (ortholog); methylglyoxal metabolic process (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN glyoxalase metabolic pathway; Leigh disease pathway; primary hyperoxaluria type 2 pathway; ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); branchiootorenal syndrome 2 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) NW_004955437 4728709 4749834 + 102014487 AGCD01034369;AGCD01034370;GBDF01047861;XM_013517101 XP_013372555 MODEL 9035096 pseudo LOC102003520 60S ribosomal protein L39 pseudogene NW_004955459 14326789 14327010 - 102003520 AGCD01048297 MODEL 8747668 pseudo LOC102014154 olfactory receptor 5K3-like NW_004955427 3741 6007 + 102014154 AGCD01026796 MODEL 8756334 pseudo LOC102016056 BAG family molecular chaperone regulator 5-like NW_004955419 14208992 14213561 + 102016056 AGCD01020014;AGCD01020015 MODEL 39133030 snrna U6 U6 spliceosomal RNA 8729907 protein-coding Xrcc5 X-ray repair cross complementing 5 ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); INVOLVED IN activation of innate immune response (ortholog); cell population proliferation (ortholog); cellular hyperosmotic salinity response (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); basal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955453 16967453 17054634 - 102024526 AGCD01044916;AGCD01044917;GBCB01075567;XM_005395688;XM_005395689 XP_005395745;XP_005395746 MODEL 10319765 ncrna LOC106147340 uncharacterized LOC106147340 NW_004955408 3840567 3854229 - 106147340 AGCD01008079;GBDF01178235;XR_001232190 MODEL 39133656 snrna U4 U4 spliceosomal RNA 8741554 protein-coding Cxcl10 C-X-C motif chemokine ligand 10 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cellular response to heat (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Acute-On-Chronic Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955433 748392 750890 - 102012569 AGCD01031336;GBDJ01185780;XM_013516266 XP_013371720 MODEL 8999385 protein-coding Exph5 exophilin 5 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN keratinocyte development (ortholog); multivesicular body sorting pathway (ortholog); positive regulation of exocytosis (ortholog); ASSOCIATED WITH epidermolysis bullosa (ortholog); Epidermolysis Bullosa Simplex 4, Localized or Generalized Intermediate, Autosomal Recessive (ortholog); esophageal cancer (ortholog); FOUND IN endosome (ortholog) NW_004955412 10604853 10674683 - 102006643 AGCD01012773;AGCD01012774;AGCD01012775;GBBH01182424;XM_005378040;XM_013511189;XM_013511191 XP_005378097;XP_013366643;XP_013366645 MODEL 9044410 protein-coding Sms spermine synthase ENCODES a protein that exhibits spermine synthase activity (ortholog); INVOLVED IN spermine biosynthetic process (ortholog); spermine metabolic process (ortholog); PARTICIPATES IN methionine cycle/metabolic pathway; polyamine metabolic pathway; spermidine metabolic pathway; ASSOCIATED WITH anxiety disorder (ortholog); Breast Cancer, Familial (ortholog); Cafe au lait Spots, Multiple (ortholog); FOUND IN cytosol (ortholog) NW_004955509 2277501 2328612 + 102011787 AGCD01065995;AGCD01065996;AGCD01065997;GBDF01088292;XM_005407826 XP_005407883 MODEL 8723748 protein-coding Txnrd2 thioredoxin reductase 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-containing complex binding (ortholog); thioredoxin-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); heart development (ortholog); hemopoiesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); mitochondrion (ortholog) NW_004955442 18150060 18205775 + 102028588 AGCD01037998;AGCD01037999;AGCD01038000;GBBH01025755;GBDF01222267;XM_013517794;XM_013517795;XM_013517796;XM_013517797;XM_013517798;XM_013517799;XM_013517800 XP_013373248;XP_013373249;XP_013373250;XP_013373251;XP_013373252;XP_013373253;XP_013373254 MODEL 9065298 protein-coding Lipf lipase F, gastric type ENCODES a protein that exhibits malate dehydrogenase activity (ortholog); triacylglycerol lipase activity (ortholog); INVOLVED IN malate metabolic process (ortholog); ASSOCIATED WITH cervical cancer (ortholog); thymoma (ortholog); FOUND IN extracellular region (ortholog); mitochondrion (ortholog) NW_004955425 4267977 4284996 - 102022515 AGCD01025310;GBBH01000444;XM_005385871;XM_005385872;XM_013514778 XP_005385928;XP_005385929;XP_013370232 MODEL 9036237 protein-coding Scn4a sodium voltage-gated channel alpha subunit 4 ENCODES a protein that exhibits voltage-gated sodium channel activity (ortholog); INVOLVED IN choline transport (ortholog); monoatomic cation transport (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); astigmatism (ortholog); Ataxia (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated sodium channel complex (ortholog) NW_004955478 7861585 7906192 + 102017869 AGCD01055998;GBCB01000298;XM_005402177;XM_013503233 XP_005402234;XP_013358687 MODEL 8972400 protein-coding LOC102012646 uncharacterized LOC102012646 NW_004955416 14157382 14202260 + 102012646 AGCD01017243;AGCD01017244;AGCD01017245;AGCD01017246;GBCQ01192362;XM_013512420 XP_013367874 MODEL 8979867 protein-coding Slc9b2 solute carrier family 9 member B2 ENCODES a protein that exhibits identical protein binding (ortholog); lithium:proton antiporter activity (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); flagellated sperm motility (ortholog); lithium ion transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); endosome membrane (ortholog) NW_004955496 5532113 5587801 + 102012874 AGCD01062355;XM_005406234;XM_005406235;XM_005406236;XM_005406237;XM_013505377;XM_013505378;XM_013505379 XP_005406291;XP_005406292;XP_005406293;XP_005406294;XP_013360831;XP_013360832;XP_013360833 MODEL 8913061 protein-coding Taok2 TAO kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); MAP kinase kinase kinase activity (ortholog); mitogen-activated protein kinase kinase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axonogenesis (ortholog); basal dendrite arborization (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); axonal growth cone (ortholog) NW_004955493 6968537 6986608 - 102028765 AGCD01061153;GBDJ01228215;XM_005405211;XM_005405212;XM_005405214;XM_005405215;XM_005405216;XR_264090 XP_005405268;XP_005405269;XP_005405271;XP_005405272;XP_005405273 MODEL 8838051 ncrna LOC102009397 uncharacterized LOC102009397 NW_004955423 12414062 12469348 + 102009397 AGCD01023718;GBDK01419002;XR_260967 MODEL 8912141 protein-coding Nrn1l neuritin 1 like ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN neuron projection extension (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); FOUND IN axon (ortholog); extracellular region (ortholog); membrane (ortholog) NW_004955484 8818768 8820477 - 102020567 AGCD01058398;GBDJ01337690;XM_005403615 XP_005403672 MODEL 8980698 protein-coding Slc25a14 solute carrier family 25 member 14 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); protein homodimerization activity (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN inorganic anion transport (ortholog); regulation of cellular response to oxidative stress (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrial envelope (ortholog); mitochondrion (ortholog) NW_004955473 4697901 4731688 - 102007006 AGCD01053957;GBCE01089348;XM_005401236;XM_005401237;XM_005401238;XM_005401239;XM_013523087;XM_013523088 XP_005401293;XP_005401294;XP_005401295;XP_005401296;XP_013378541;XP_013378542 MODEL 8739089 protein-coding LOC102019231 multiple PDZ domain protein-like NW_004955849 9290 12584 + 102019231 AGCD01078489;XM_005415135 XP_005415192 MODEL 39132301 snrna U6 U6 spliceosomal RNA 8731628 pseudo LOC102018003 ubiquitin-conjugating enzyme E2 C pseudogene NW_004955500 8246022 8246543 - 102018003 AGCD01063985 MODEL 8949339 protein-coding LOC102009788 vomeronasal type-1 receptor 4-like NW_004955603 389482 390411 - 102009788 AGCD01076843;XM_005414844 XP_005414901 MODEL 8943252 protein-coding Tssc4 tumor suppressing subtransferable candidate 4 ENCODES a protein that exhibits molecular sequestering activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN spliceosomal snRNP assembly (ortholog); spliceosomal tri-snRNP complex assembly (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); U5 snRNP (ortholog) NW_004955422 14175271 14178991 + 102014579 AGCD01022855;GBDF01024714;XM_013514301;XM_013514302 XP_013369755;XP_013369756 MODEL 8879106 protein-coding Dnaaf1 dynein axonemal assembly factor 1 ENCODES a protein that exhibits dynein complex binding (ortholog); INVOLVED IN axonemal dynein complex assembly (ortholog); cilium assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axoneme (ortholog) NW_004955564 132497 149399 - 102026049 AGCD01074187;GBCE01141752;GBDF01010850;XM_013509203 XP_013364657 MODEL 8964735 protein-coding Tnxb tenascin XB ENCODES a protein that exhibits collagen binding (ortholog); collagen fibril binding (ortholog); heparin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); cell-matrix adhesion (ortholog); collagen fibril organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcoholic cardiomyopathy (ortholog); alopecia (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955437 516713 561188 - 102007932 AGCD01034140;AGCD01034141;AGCD01034142;AGCD01034143;AGCD01034144;AGCD01034145;GBDI01019761;GBDI01324921;XM_013516898 XP_013372352 MODEL 8757030 protein-coding LOC102022110 olfactory receptor 8K5-like NW_004955511 5121480 5122424 + 102022110 AGCD01066549;XM_005408086 XP_005408143 MODEL 39132782 snrna U6 U6 spliceosomal RNA 9035015 pseudo LOC102025316 cyclic AMP-dependent transcription factor ATF-2 pseudogene NW_004955404 32070084 32076574 + 102025316 AGCD01004032 MODEL 8771381 pseudo LOC102007906 vomeronasal type-1 receptor 48-like NW_004955421 21878638 21880909 - 102007906 AGCD01022124;XM_005383931 MODEL 39132645 snrna U6 U6 spliceosomal RNA 8904930 pseudo LOC102003840 matrin-3 pseudogene NW_004955408 32750191 32754243 - 102003840 AGCD01008854 MODEL 8887584 protein-coding Lrtm2 leucine rich repeat transmembrane protein 2 INVOLVED IN positive regulation of synapse assembly (ortholog) NW_004955454 4355698 4372041 + 102026184 AGCD01045121;GBDI01358360;XM_005395955;XM_013520229;XM_013520230;XM_013520231;XM_013520232;XM_013520233 XP_005396012;XP_013375683;XP_013375684;XP_013375685;XP_013375686;XP_013375687 MODEL 8927866 protein-coding Ext1 exostosin glycosyltransferase 1 ENCODES a protein that exhibits glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); axon guidance (ortholog); basement membrane organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); breast cancer (ortholog); FOUND IN catalytic complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955417 23798044 24067759 - 102003237 AGCD01018447;AGCD01018448;AGCD01018449;AGCD01018450;GBCQ01093252;GBDJ01080892;XM_005381900 XP_005381957 MODEL 9004443 pseudo LOC102004574 tetratricopeptide repeat protein 37 pseudogene NW_004955409 17034095 17039090 + 102004574 AGCD01009758 MODEL 8876978 pseudo LOC102005285 poly [ADP-ribose] polymerase 8 pseudogene NW_004955430 8008251 8010551 - 102005285 AGCD01029378 MODEL 8849307 protein-coding LOC102023164 uncharacterized LOC102023164 NW_004955423 5187581 5189464 - 102023164 AGCD01023556;XM_005385354 XP_005385411 MODEL 8996381 protein-coding Glod4 glyoxalase domain containing 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955481 2317869 2324352 - 102007120 AGCD01056874;XM_005402921 XP_005402978 MODEL 8720095 protein-coding Bpgm bisphosphoglycerate mutase ENCODES a protein that exhibits bisphosphoglycerate mutase activity (ortholog); INVOLVED IN cellular response to stress (ortholog); defense response to protozoan (ortholog); erythrocyte development (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH familial erythrocytosis 8 (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955494 7867295 7889440 - 102019610 AGCD01061558;GBBH01208829;XM_005405507;XM_005405508;XM_013505024 XP_005405564;XP_005405565;XP_013360478 MODEL 8764212 protein-coding Rab32 RAB32, member RAS oncogene family ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); AP-2 adaptor complex binding (ortholog); AP-3 adaptor complex binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); endosome to melanosome transport (ortholog); melanosome assembly (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Experimental Liver Cirrhosis (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN early endosome (ortholog); early endosome lumen (ortholog); endoplasmic reticulum (ortholog) NW_004955436 14171123 14177255 - 102005504 AGCD01033868;GBCC01045894;GBCQ01062627;XM_013516677 XP_013372131 MODEL 8731356 protein-coding Gcsh glycine cleavage system protein H ENCODES a protein that exhibits aminomethyltransferase activity (ortholog); enzyme binding (ortholog); INVOLVED IN glycine decarboxylation via glycine cleavage system (ortholog); PARTICIPATES IN folate cycle metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amino acid metabolic disorder (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955522 3858156 3869730 - 102007584 AGCD01068401;AGCD01068402;GBCE01077313;GBDJ01228720;XM_013507109 XP_013362563 MODEL 8934912 protein-coding Guca1b guanylate cyclase activator 1B ENCODES a protein that exhibits calcium sensitive guanylate cyclase activator activity (ortholog); guanylate cyclase regulator activity (ortholog); INVOLVED IN phototransduction (ortholog); response to light stimulus (ortholog); visual perception (ortholog); PARTICIPATES IN altered visual phototransduction pathway; calcium/calcium-mediated signaling pathway; retinitis pigmentosa pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cilium (ortholog); cone photoreceptor outer segment (ortholog); photoreceptor inner segment (ortholog) NW_004955437 8384692 8390946 - 102022226 AGCD01034488;GBCQ01012021;XM_005389718 XP_005389775 MODEL 8732843 protein-coding Samsn1 SAM domain, SH3 domain and nuclear localization signals 1 ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); INVOLVED IN negative regulation of adaptive immune response (ortholog); negative regulation of B cell activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955407 16329838 16377763 - 102007298 AGCD01007213;AGCD01007214;GBDI01254171;XM_005375567;XM_013503803;XM_013503806;XR_001231017 XP_005375624;XP_013359257;XP_013359260 MODEL 8966929 protein-coding LOC102020284 HLA class II histocompatibility antigen, DRB1-1 beta chain-like NW_004955437 1199927 1215823 - 102020284 AGCD01034196;AGCD01034197;GBBH01035307;GBDK01395633;XM_013517039 XP_013372493 MODEL 39133031 snrna U6 U6 spliceosomal RNA 8896767 protein-coding Tchhl1 trichohyalin like 1 ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog) NW_004955589 335920 343206 + 102024071 AGCD01076166;XM_005414583 XP_005414640 MODEL 10320425 ncrna LOC106147341 uncharacterized LOC106147341 NW_004955408 3803692 3814521 + 106147341 AGCD01008077;AGCD01008078;AGCD01008079;GBCQ01013053;XR_001232191 MODEL 9032667 protein-coding Syce2 synaptonemal complex central element protein 2 ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN central element (ortholog); chromosome (ortholog); nucleoplasm (ortholog) NW_004955415 31957244 31969922 - 102024899 AGCD01016704;GBDF01047095;XM_005381038;XM_005381039;XM_013512241;XM_013512242 XP_005381095;XP_005381096;XP_013367695;XP_013367696 MODEL 8770617 protein-coding Xrcc6 X-ray repair cross complementing 6 ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); INVOLVED IN activation of innate immune response (ortholog); cellular hyperosmotic salinity response (ortholog); cellular response to gamma radiation (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); basal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); DNA-dependent protein kinase complex (ortholog) NW_004955413 27135785 27158344 + 102021869 AGCD01014495;AGCD01014496;GBCE01053767;XM_005379361;XM_005379362;XM_005379363;XM_005379364;XM_013511358;XM_013511359;XM_013511360 XP_005379418;XP_005379419;XP_005379420;XP_005379421;XP_013366812;XP_013366813;XP_013366814 MODEL 8872103 ncrna LOC102009790 uncharacterized LOC102009790 NW_004955403 20132939 20135472 - 102009790 AGCD01002154;GBDJ01243887;XR_259189 MODEL 8832452 protein-coding Il23r interleukin 23 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-12 receptor binding (ortholog); interleukin-23 binding (ortholog); INVOLVED IN interleukin-23-mediated signaling pathway (ortholog); negative regulation of interleukin-10 production (ortholog); positive regulation of defense response to virus by host (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH ankylosing spondylitis (ortholog); anxiety disorder (ortholog); arthritis (ortholog); FOUND IN cell surface (ortholog); interleukin-23 receptor complex (ortholog); plasma membrane (ortholog) NW_004955423 23841342 23885191 - 102016288 AGCD01024020;AGCD01024021;GBBH01099037;XM_005385277 XP_005385334 MODEL 8892908 protein-coding Tgfa transforming growth factor alpha ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell surface receptor signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN altered epidermal growth factor/neuregulin signaling pathway; epidermal growth factor/neuregulin signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH acute kidney failure (ortholog); Animal Mammary Neoplasms (ortholog); esophageal cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) NW_004955424 14616390 14709723 + 102005158 AGCD01024659;GBBH01221968;XM_005385613;XM_005385614 XP_005385670;XP_005385671 MODEL 8735335 ncrna LOC102025323 uncharacterized LOC102025323 NW_004955456 3093732 3094240 + 102025323 AGCD01046263;XR_262875 MODEL 8881541 protein-coding Txnrd3 thioredoxin reductase 3 ENCODES a protein that exhibits thioredoxin-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN blastocyst formation (ortholog); glutathione metabolic process (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); cervical cancer (ortholog); colorectal adenoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955429 16845466 16880481 + 102022949 AGCD01028839;GBCE01069985;GBDI01384403;XM_005387260 XP_005387317 MODEL 8721617 pseudo LOC102003523 dimethylaniline monooxygenase [N-oxide-forming] 5-like NW_004955462 10251055 10272845 - 102003523 AGCD01049359;AGCD01049360 MODEL 8829283 protein-coding Slc9c1 solute carrier family 9 member C1 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN motile cilium (ortholog) NW_004955427 12541396 12644543 - 102025708 AGCD01027218;AGCD01027219;AGCD01027220;AGCD01027221;AGCD01027222;GBDF01051841;XM_005386384;XM_005386385;XM_013515039 XP_005386441;XP_005386442;XP_013370493 MODEL 8844786 pseudo LOC102009401 CGG triplet repeat-binding protein 1-like NW_004955503 3186612 3188685 + 102009401 AGCD01064619 MODEL 9008714 protein-coding Kics2 KICSTOR subunit 2 INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); negative regulation of TORC1 signaling (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 83 (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN KICSTOR complex (ortholog) NW_004955458 11027550 11048563 - 102008505 AGCD01047714;AGCD01047715;GBBH01193744;GBDF01082041;XM_013520920 XP_013376374 MODEL 8990675 ncrna LOC102005286 uncharacterized LOC102005286 NW_004955512 4093717 4097420 - 102005286 AGCD01066728;GBCQ01087532;XR_001231725 MODEL 9039588 ncrna LOC102010585 uncharacterized LOC102010585 NW_004955418 15889079 15907996 + 102010585 AGCD01019113;GBDF01085813;XR_001233526;XR_001233527;XR_260559 MODEL 8984781 protein-coding Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); endocytic recycling (ortholog); microtubule-based movement (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN centrosome (ortholog); cytoplasmic dynein complex (ortholog); endocytic vesicle membrane (ortholog) NW_004955620 46535 82595 - 102016219 AGCD01077361;GBDF01045921;XM_005415011;XM_013510152 XP_005415068;XP_013365606 MODEL 8749247 protein-coding LOC102019232 doublesex- and mab-3-related transcription factor C1-like NW_004956354 942 4659 + 102019232 AGCD01079474;GBDF01153143;XM_005415198 XP_005415255 MODEL 8879932 pseudo LOC102022112 26S protease regulatory subunit 10B pseudogene NW_004955432 541788 542950 - 102022112 AGCD01030568 MODEL 39131546 protein-coding TOB1 transducer of ERBB2, 1 730469596 misc_rna Six3os1_7 Six3os1 conserved region 7 8859718 protein-coding Dnaaf10 dynein axonemal assembly factor 10 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN RPAP3/R2TP/prefoldin-like complex (ortholog) NW_004955424 16706272 16727483 + 102023818 AGCD01024748;AGCD01024749;GBCE01024448;XM_005385674 XP_005385731 MODEL 8994995 protein-coding LOC102012648 galectin-9-like NW_004955481 5681486 5685579 - 102012648 AGCD01057000;XM_005402781 XP_005402838 MODEL 8863689 protein-coding Smtn smoothelin INVOLVED IN negative regulation of systemic arterial blood pressure (ortholog); positive regulation of cardiac muscle contraction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); nucleoplasm (ortholog) NW_004955455 5271615 5294151 + 102030038 AGCD01045720;GBDF01050278;XM_005396291;XM_005396292;XM_005396293;XM_005396294 XP_005396348;XP_005396349;XP_005396350;XP_005396351 MODEL 8888967 protein-coding Lipg lipase G, endothelial type ENCODES a protein that exhibits glycerophospholipase activity (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); triacylglycerol lipase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); high-density lipoprotein particle remodeling (ortholog); phospholipid homeostasis (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); cardiovascular system disease (ortholog); cerebral infarction (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); extracellular region (ortholog) NW_004955402 34666757 34689726 + 102013987 AGCD01000868;GBDJ01313997;XM_005372911 XP_005372968 MODEL 8878308 protein-coding Ext2 exostosin glycosyltransferase 2 ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); glucuronosyltransferase activity (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); endochondral bone morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN catalytic complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955422 3303948 3438381 - 102024123 AGCD01022507;AGCD01022508;AGCD01022509;GBBH01088284;GBDK01079257;XM_013514241 XP_013369695 MODEL 8884717 protein-coding Fip1l1 factor interacting with PAPOLA and CPSF1 INVOLVED IN mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955447 17265269 17334197 - 102011709 AGCD01041116;AGCD01041117;AGCD01041118;GBDI01017847;XM_005392905;XM_005392906;XM_005392907;XM_005392908;XM_005392909;XM_005392910;XM_005392911;XM_005392912;XM_005392913 XP_005392962;XP_005392963;XP_005392964;XP_005392965;XP_005392966;XP_005392967;XP_005392968;XP_005392969;XP_005392970 MODEL 39133663 snrna U4 U4 spliceosomal RNA 39133456 misc_rna NRON ncRNA Repressor of NFAT (nuclear factor of activated T cells) 8869583 protein-coding Cxcl11 C-X-C motif chemokine ligand 11 ENCODES a protein that exhibits chemokine activity (ortholog); CXCR chemokine receptor binding (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); chemokine-mediated signaling pathway (ortholog); ASSOCIATED WITH bacterial pneumonia (ortholog); bronchiolitis obliterans (ortholog); celiac disease (ortholog); FOUND IN membrane (ortholog) NW_004955433 769449 771137 - 102012233 AGCD01031336;GBDJ01304389;XM_013516267 XP_013371721 MODEL 8996395 pseudo LOC102009404 sorting nexin-6 pseudogene NW_004955427 21883319 21885923 - 102009404 AGCD01027461 MODEL 39132302 snrna U6 U6 spliceosomal RNA 8733057 protein-coding Tssk2 testis specific serine kinase 2 ENCODES a protein that exhibits magnesium ion binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN spermatid development (ortholog); FOUND IN acrosomal vesicle (ortholog); centriole (ortholog); cytoplasm (ortholog) NW_004955442 18846491 18847485 - 102012906 AGCD01038022;GBDF01236314;XM_005415367 XP_005415424 MODEL 8896711 pseudo LOC102021392 ADP-ribosylation factor-like protein 6-interacting protein 6 pseudogene NW_004955543 1498723 1499331 - 102021392 AGCD01071623 MODEL 9004030 ncrna LOC102018004 uncharacterized LOC102018004 NW_004955426 14561873 14580787 + 102018004 AGCD01026394;GBDF01280622;XR_261196 MODEL 8981040 protein-coding Tchp trichoplein keratin filament binding INVOLVED IN apoptotic process (ortholog); negative regulation of cell growth (ortholog); negative regulation of cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN apical cortex (ortholog); centrosome (ortholog); ciliary transition fiber (ortholog) NW_004955455 8681058 8696996 - 102017744 AGCD01045904;AGCD01045905;AGCD01045906;AGCD01045907;GBBH01026251;XM_005396443;XM_013520481 XP_005396500;XP_013375935 MODEL 10318026 ncrna LOC106147342 uncharacterized LOC106147342 NW_004955545 1443962 1452337 + 106147342 AGCD01071855;GBDF01235722;XR_001232192 MODEL 39132783 snrna U6 U6 spliceosomal RNA 8717395 protein-coding Larp1b La ribonucleoprotein 1B ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955428 13319322 13427932 - 102015871 AGCD01027948;AGCD01027949;AGCD01027950;AGCD01027951;GBDK01309285;XM_013515251 XP_013370705 MODEL 9009417 protein-coding Scn4b sodium voltage-gated channel beta subunit 4 ENCODES a protein that exhibits sodium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN AV node cell action potential (ortholog); cardiac muscle cell action potential involved in contraction (ortholog); cardiac muscle contraction (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Familial Atrial Fibrillation 17 (ortholog); long QT syndrome 10 (ortholog); FOUND IN intercalated disc (ortholog); plasma membrane (ortholog); voltage-gated sodium channel complex (ortholog) NW_004955412 19312697 19330913 - 102006111 AGCD01012950;GBCB01003984;XM_005378229 XP_005378286 MODEL 39132646 snrna U6 U6 spliceosomal RNA 9017215 ncrna LOC102014156 uncharacterized LOC102014156 NW_004955511 2259218 2268513 + 102014156 AGCD01066396;GBDF01178034;XR_264416 MODEL 9031766 protein-coding LOC102009791 uncharacterized LOC102009791 NW_004955648 46741 47626 - 102009791 AGCD01077769;GBDF01075664;XM_005415051 XP_005415108 MODEL 8932824 protein-coding Lrtm3 leucine rich repeat transmembrane protein 3 ASSOCIATED WITH uterine carcinosarcoma (ortholog) NW_004955404 8401713 8425519 + 102018151 AGCD01003352;AGCD01003353;GBDF01148279;XM_013516846 XP_013372300 MODEL 8751625 pseudo LOC102004575 F-box only protein 9 pseudogene NW_004955461 14590359 14591743 + 102004575 AGCD01049056 MODEL 8828246 protein-coding LOC102016068 olfactory receptor 7D4-like NW_004955495 282769 351052 - 102016068 AGCD01061617;AGCD01061618;AGCD01061619;AGCD01061620;AGCD01061621;AGCD01061622;AGCD01061623;AGCD01061624;GBDF01262314;XM_005405550 XP_005405607 MODEL 8832602 protein-coding Il24 interleukin 24 INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to lipopolysaccharide (ortholog); negative regulation of cell migration (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Lung Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955406 42431845 42437392 + 102023328 AGCD01006707;XM_013502798;XM_013502800;XM_013502801 XP_013358252;XP_013358254;XP_013358255 MODEL 8954174 protein-coding Tob1 transducer of ERBB2, 1 ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); SMAD binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of BMP signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of nuclear-transcribed mRNA poly(A) tail shortening (ortholog); ASSOCIATED WITH Chloracne (ortholog); cholangiocarcinoma (ortholog); endometriosis (ortholog); FOUND IN CCR4-NOT complex (ortholog); cytoplasm (ortholog) NW_004955451 10950270 10963183 + 102029034 AGCD01043336;AGCD01043337;AGCD01043338;GBDK01131967;XM_013519063 XP_013374517 MODEL 8771617 pseudo LOC102025325 centrosomal protein of 57 kDa-like NW_004955408 25270112 25367598 + 102025325 AGCD01008636;AGCD01008637;AGCD01008638;AGCD01008639 MODEL 8779533 protein-coding Glod5 glyoxalase domain containing 5 ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955543 320087 321311 + 102022330 AGCD01071575;GBDF01225208;XM_005411367 XP_005411424 MODEL 8782965 protein-coding Bphl biphenyl hydrolase like ENCODES a protein that exhibits alpha-amino-acid esterase activity (ortholog); serine hydrolase activity (ortholog); INVOLVED IN homocysteine metabolic process (ortholog); xenobiotic metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955465 10093342 10120588 - 102017109 AGCD01050501;AGCD01050502;GBCQ01001027;XM_005398902;XM_005398903;XM_013521831 XP_005398959;XP_005398960;XP_013377285 MODEL 8820415 protein-coding Slc25a15 solute carrier family 25 member 15 ENCODES a protein that exhibits antiporter activity (ortholog); arginine:ornithine antiporter activity (ortholog); L-arginine transmembrane transporter activity (ortholog); INVOLVED IN L-arginine transmembrane transport (ortholog); L-lysine transmembrane transport (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); Breast Cancer, Familial (ortholog); citrullinemia (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955431 5673207 5691615 - 102012116 AGCD01030038;GBCQ01031607;GBDF01083462;XM_013515895 XP_013371349 MODEL 8909018 ncrna LOC102012980 uncharacterized LOC102012980 NW_004955426 6108020 6117151 - 102012980 AGCD01026144;GBCE01090878;XR_001234326;XR_261191 MODEL 9055617 protein-coding Rab33a RAB33A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); prostate cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955473 4875230 4891898 - 102009493 AGCD01053961;AGCD01053962;GBDJ01147195;XM_005401246;XM_005401247 XP_005401303;XP_005401304 MODEL 9025162 protein-coding Slc9c2 solute carrier family 9 member C2 (putative) ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955406 13734098 13838966 - 102006207 AGCD01005950;AGCD01005951;AGCD01005952;AGCD01005953;AGCD01005954;GBDF01119589;XM_013520788;XM_013520790 XP_013376242;XP_013376244 MODEL 39133032 snrna U6 U6 spliceosomal RNA 8761052 protein-coding Tyk2 tyrosine kinase 2 ENCODES a protein that exhibits growth hormone receptor binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); interleukin-10-mediated signaling pathway (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; Interleukin-10 signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955495 1618099 1637996 - 102004082 AGCD01061706;AGCD01061707;AGCD01061708;GBDJ01227777;XM_005405593;XM_013505151;XM_013505152;XM_013505153;XM_013505154;XM_013505155;XM_013505156;XM_013505157;XM_013505158;XM_013505159 XP_005405650;XP_013360605;XP_013360606;XP_013360607;XP_013360608;XP_013360609;XP_013360610;XP_013360611;XP_013360612;XP_013360613 MODEL 8708647 protein-coding Gda guanine deaminase ENCODES a protein that exhibits guanine deaminase activity (ortholog); INVOLVED IN deoxyguanosine catabolic process (ortholog); dGMP catabolic process (ortholog); GMP catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); postsynapse (ortholog); postsynaptic cytosol (ortholog) NW_004955434 983388 1050413 - 102019310 AGCD01032047;AGCD01032048;AGCD01032049;AGCD01032050;GBBH01187473;GBCB01101187;XM_005388518 XP_005388575 MODEL 9005767 protein-coding LOC102020285 olfactory receptor 2A5-like NW_004955537 2745101 2746051 - 102020285 AGCD01070938;XM_005410631 XP_005410688 MODEL 9036076 protein-coding Extl1 exostosin like glycosyltransferase 1 ENCODES a protein that exhibits glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955452 5490801 5506178 + 102011497 AGCD01044036;GBCB01089527;XM_005394837;XM_013519676;XM_013519677 XP_005394894;XP_013375130;XP_013375131 MODEL 8950644 protein-coding Guca2a guanylate cyclase activator 2A ENCODES a protein that exhibits guanylate cyclase activator activity (ortholog) NW_004955537 1805671 1808797 - 102008569 AGCD01070905;GBDJ01089620;XM_005410593;XM_013507783 XP_005410650;XP_013363237 MODEL 8964690 protein-coding Kidins220 kinase D interacting substrate 220 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein kinase binding (ortholog); protein kinase regulator activity (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); dendrite morphogenesis (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cerebral palsy (ortholog); cervical cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); late endosome (ortholog); postsynapse (ortholog) NW_004955487 782683 862079 + 102007667 AGCD01059231;AGCD01059232;AGCD01059233;AGCD01059234;GBDK01009188;XM_005404341;XM_005404344;XM_005404345;XM_013504353;XM_013504354;XM_013504355;XM_013504356 XP_005404398;XP_005404401;XP_005404402;XP_013359807;XP_013359808;XP_013359809;XP_013359810 MODEL 9039599 protein-coding LOC102010591 acyl-CoA desaturase 1 NW_004955485 9758703 9773277 + 102010591 AGCD01058780;GBDK01014034;XM_005403913 XP_005403970 MODEL 9046474 pseudo LOC102003842 protein CASC4 pseudogene NW_004955459 21261 22548 - 102003842 AGCD01047923 MODEL 8796823 protein-coding Cxcl12 C-X-C motif chemokine ligand 12 ENCODES a protein that exhibits chemokine activity (ortholog); chemokine receptor binding (ortholog); CXCR chemokine receptor binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); ameboidal-type cell migration (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; syndecan signaling pathway; ASSOCIATED WITH anti-basement membrane glomerulonephritis (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); membrane (ortholog) NW_004955546 1929269 1941690 - 102011699 AGCD01072081;GBDI01001502;XM_005411777;XM_005411778 XP_005411834;XP_005411835 MODEL 8816666 protein-coding Xrn1 5'-3' exoribonuclease 1 ENCODES a protein that exhibits 5'-3' RNA exonuclease activity (ortholog); G-quadruplex DNA binding (ortholog); G-quadruplex RNA binding (ortholog); INVOLVED IN cellular response to cycloheximide (ortholog); cellular response to puromycin (ortholog); histone mRNA catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955508 3441540 3561896 + 102014073 AGCD01065811;AGCD01065812;AGCD01065813;AGCD01065814;AGCD01065815;AGCD01065816;GBBH01016162;XM_005407742;XM_013506250;XM_013506251;XM_013506252 XP_005407799;XP_013361704;XP_013361705;XP_013361706 MODEL 8732307 protein-coding Taok3 TAO kinase 3 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); MAPK cascade (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog); membrane raft (ortholog) NW_004955455 13020618 13207539 + 102019028 AGCD01046056;AGCD01046057;AGCD01046058;AGCD01046059;AGCD01046060;GBDF01250902;XM_005396533;XM_005396534 XP_005396590;XP_005396591 MODEL 39132784 snrna U6 U6 spliceosomal RNA 8939353 pseudo LOC102003534 stAR-related lipid transfer protein 4 pseudogene NW_004955474 6726759 6727385 + 102003534 AGCD01054486;XM_005401390 MODEL 8869541 protein-coding Liph lipase H ENCODES a protein that exhibits glycerophospholipase activity (ortholog); heparin binding (ortholog); INVOLVED IN lipid catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); familial woolly hair syndrome (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955420 22015254 22049508 + 102010908 AGCD01021178;AGCD01021179;AGCD01021180;GBBH01172461;XM_005383294 XP_005383351 MODEL 8773525 protein-coding Tgfb1 transforming growth factor beta 1 ENCODES a protein that exhibits cytokine activity (ortholog); enzyme binding (ortholog); growth factor activity (ortholog); INVOLVED IN adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains (ortholog); animal organ regeneration (ortholog); aortic valve morphogenesis (ortholog); PARTICIPATES IN altered transforming growth factor-beta Smad dependent signaling pathway; colorectal cancer pathway; glypican signaling pathway; ASSOCIATED WITH Abdominal Pain (ortholog); acromicric dysplasia (ortholog); actinic keratosis (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955555 274405 288441 - 102014951 AGCD01073024;GBDF01304069;XM_005412338 XP_005412395 MODEL 8933341 pseudo LOC102018802 UMP-CMP kinase pseudogene NW_004955407 36136514 36150095 + 102018802 AGCD01007758;AGCD01007759 MODEL 8754825 ncrna LOC102007907 uncharacterized LOC102007907 NW_004955491 1073965 1082901 - 102007907 AGCD01060347;GBCB01024533;XR_264032 MODEL 8925147 pseudo LOC102021393 3-hydroxyisobutyrate dehydrogenase, mitochondrial-like NW_004955439 7425526 7524935 - 102021393 AGCD01035768;AGCD01035769;AGCD01035770;AGCD01035771;AGCD01035772 MODEL 9065856 protein-coding Extl2 exostosin like glycosyltransferase 2 ENCODES a protein that exhibits alpha-1,4-N-acetylgalactosaminyltransferase activity (ortholog); glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN N-acetylglucosamine metabolic process (ortholog); UDP-N-acetylgalactosamine metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955435 5509648 5527751 - 102006385 AGCD01032890;GBCB01020697;GBDF01193174;XM_005388800 XP_005388857 MODEL 9051476 protein-coding Tcim transcriptional and immune response regulator ENCODES a protein that exhibits Notch binding (ortholog); INVOLVED IN cellular response to heat (ortholog); endothelial cell activation involved in immune response (ortholog); negative regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleolus (ortholog) NW_004955536 2786384 2786988 - 102017698 AGCD01070802;GBCE01077034;XM_005410536 XP_005410593 MODEL 8994491 protein-coding Sanbr SANT and BTB domain regulator of CSR ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN isotype switching (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955424 22728802 22785374 - 102024931 AGCD01024983;AGCD01024984;AGCD01024985;AGCD01024986;AGCD01024987;GBDI01291851;GBDJ01419693;XM_013514723 XP_013370177 MODEL 8714761 protein-coding LOC102014157 olfactory receptor 8H1-like NW_004955511 1057094 1058032 + 102014157 AGCD01066354;XM_013506419 XP_013361873 MODEL 8699706 protein-coding Dnaaf11 dynein axonemal assembly factor 11 INVOLVED IN axonemal dynein complex assembly (ortholog); cerebrospinal fluid circulation (ortholog); cilium movement (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN apical cytoplasm (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955461 7204165 7311524 - 102012512 AGCD01048917;GBDI01260030;XM_005398014;XM_005398015;XM_005398016;XM_013521348 XP_005398071;XP_005398072;XP_005398073;XP_013376802 MODEL 8835571 protein-coding Larp4 La ribonucleoprotein 4 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); poly(A) binding (ortholog); INVOLVED IN positive regulation of translation (ortholog); post-transcriptional regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); cytosolic small ribosomal subunit (ortholog) NW_004955547 930988 996877 + 102015987 AGCD01072197;AGCD01072198;AGCD01072199;AGCD01072200;GBDF01086402;XM_005411878;XM_005411880;XM_005411881;XM_005411882;XM_013508449;XM_013508450 XP_005411935;XP_005411937;XP_005411938;XP_005411939;XP_013363903;XP_013363904 MODEL 8906377 pseudo LOC102009792 MAP/microtubule affinity-regulating kinase 3-like NW_004955403 31079581 31081821 + 102009792 AGCD01002411 MODEL 8860945 protein-coding Smtnl1 smoothelin like 1 ENCODES a protein that exhibits calmodulin binding (ortholog); CH domain binding (ortholog); disordered domain specific binding (ortholog); INVOLVED IN muscle organ morphogenesis (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of vasoconstriction (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); melanoma (ortholog); stomach cancer (ortholog); FOUND IN contractile muscle fiber (ortholog); cytoplasm (ortholog); I band (ortholog) NW_004955511 2512950 2521200 + 102018208 AGCD01066410;GBCB01004951;XM_005407998 XP_005408055 MODEL 8906913 ncrna LOC102005289 uncharacterized LOC102005289 NW_004955514 2421476 2423697 + 102005289 AGCD01067079;GBDF01075509;XR_264495 MODEL 39132785 snrna U6 U6 spliceosomal RNA 8960366 pseudo LOC102004578 insulin-like peptide INSL6 NW_004955463 1887844 1902130 + 102004578 AGCD01049528 MODEL 39133664 snrna U4 U4 spliceosomal RNA 9043021 protein-coding Syce3 synaptonemal complex central element protein 3 INVOLVED IN positive regulation of apoptotic process (ortholog); reciprocal meiotic recombination (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); sarcoma (ortholog); FOUND IN central element (ortholog); chromosome (ortholog); nucleus (ortholog) NW_004955413 33537646 33573787 - 102006895 AGCD01014677;AGCD01014678;AGCD01014679;AGCD01014680;GBDF01010675;XM_005379589 XP_005379646 MODEL 9032422 protein-coding Glp1r glucagon like peptide 1 receptor ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); glucagon-like peptide 1 receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); associative learning (ortholog); cAMP/PKA signal transduction (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); disease of cellular proliferation (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN plasma membrane (ortholog) NW_004955437 4394088 4418172 - 102014490 AGCD01034364;GBDF01060219;GBDK01408238;XM_013517124;XR_001235111 XP_013372578 MODEL 8890113 protein-coding Nrp1 neuropilin 1 ENCODES a protein that exhibits growth factor binding (ortholog); GTPase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN angiogenesis (ortholog); angiogenesis involved in coronary vascular morphogenesis (ortholog); artery morphogenesis (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955462 4101997 4241012 + 102024435 AGCD01049216;AGCD01049217;GBDI01070095;XM_005398143;XM_005398144;XM_005398145;XM_005398146;XM_005398147;XM_005398148 XP_005398200;XP_005398201;XP_005398202;XP_005398203;XP_005398204;XP_005398205 MODEL 8943753 pseudo LOC102019234 trifunctional purine biosynthetic protein adenosine-3 pseudogene NW_004955403 4274146 4277480 - 102019234 AGCD01001784 MODEL 8749915 protein-coding Dync1li2 dynein cytoplasmic 1 light intermediate chain 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); centrosome localization (ortholog); microtubule cytoskeleton organization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasmic dynein complex (ortholog); kinetochore (ortholog) NW_004955433 23262981 23286506 - 102022530 AGCD01031956;GBDF01090277;XM_005388471;XM_013516193;XM_013516194 XP_005388528;XP_013371647;XP_013371648 MODEL 9037517 protein-coding LOC102009405 suppressor protein SRP40-like NW_004955428 50432 51439 - 102009405 AGCD01027559;XM_005386839 XP_005386896 MODEL 8941618 protein-coding Bpi bactericidal permeability increasing protein ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN defense response to bacterium (ortholog); immune response (ortholog); negative regulation of interleukin-6 production (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Crohn's disease (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); extracellular region (ortholog) NW_004955445 18393854 18433948 - 102012913 AGCD01039904;GBCQ01100945;XM_005392537;XM_013518374;XM_013518375;XM_013518376 XP_005392594;XP_013373828;XP_013373829;XP_013373830 MODEL 39133033 snrna U6 U6 spliceosomal RNA 8986462 protein-coding Gdap1 ganglioside induced differentiation associated protein 1 INVOLVED IN cellular response to vitamin D (ortholog); mitochondrial fission (ortholog); mitochondrial fusion (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH autosomal recessive axonal Charcot-Marie-Tooth disease with vocal cord paresis (ortholog); brachydactyly (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955444 6053422 6069741 - 102018866 AGCD01038847;AGCD01038848;GBDJ01314137;XM_005392075 XP_005392132 MODEL 8995172 protein-coding Tssk3 testis specific serine kinase 3 ENCODES a protein that exhibits magnesium ion binding (ortholog); manganese ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955452 10690847 10693660 + 102022250 AGCD01044288;AGCD01044289;GBBH01077856;GBDF01000050;XM_005395066 XP_005395123 MODEL 8950239 protein-coding LOC102018007 unconventional myosin-XVB-like NW_004955506 6612784 6644900 - 102018007 AGCD01065432;GBCE01126793;GBDI01245097;XM_005407496 XP_005407553 MODEL 8946047 protein-coding LOC102023166 cytochrome P450 26B1 ENCODES a protein that exhibits oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (ortholog); retinoic acid 4-hydroxylase activity (ortholog); retinoic acid binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); cell fate determination (ortholog); cellular response to retinoic acid (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955424 13336189 13355368 + 102023166 AGCD01024631;AGCD01024632;GBBH01028900;GBDK01021875;XM_005385584 XP_005385641 MODEL 8806603 pseudo LOC102012649 pre-mRNA-splicing factor SLU7 pseudogene NW_004955481 9058890 9071635 + 102012649 AGCD01057094 MODEL 8818755 protein-coding Six4 SIX homeobox 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN embryonic cranial skeleton morphogenesis (ortholog); embryonic skeletal system morphogenesis (ortholog); fungiform papilla morphogenesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955466 8902728 8915685 + 102014993 AGCD01051004;AGCD01051005;GBDI01052983;XM_005399170;XM_005399171;XM_005399172;XM_013521927 XP_005399227;XP_005399228;XP_005399229;XP_013377381 MODEL 10233283 ncrna LOC106147343 uncharacterized LOC106147343 NW_004955545 1341234 1349108 + 106147343 AGCD01071850;GBDJ01058943;XR_001232198 MODEL 8992802 protein-coding LOC102022115 uncharacterized LOC102022115 NW_004955524 3165835 3175594 - 102022115 AGCD01068862;AGCD01068863;GBDF01100035;XM_005409568;XM_013507310;XM_013507311;XM_013507312 XP_005409625;XP_013362764;XP_013362765;XP_013362766 MODEL 9046532 protein-coding Kif11 kinesin family member 11 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN mitotic centrosome separation (ortholog); mitotic spindle assembly (ortholog); regulation of mitotic centrosome separation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Aneuploidy (ortholog); astigmatism (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule (ortholog) NW_004955425 764382 804856 - 102006047 AGCD01025201;AGCD01025202;GBDI01293707;XM_005385823 XP_005385880 MODEL 8745040 protein-coding Cxcl13 C-X-C motif chemokine ligand 13 ENCODES a protein that exhibits CCR10 chemokine receptor binding (ortholog); chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); B cell chemotaxis (ortholog); B cell chemotaxis across high endothelial venule (ortholog); ASSOCIATED WITH endometriosis (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955433 2123190 2129119 + 102017597 AGCD01031382;GBDF01093996;XM_005388194 XP_005388251 MODEL 8818059 protein-coding LOC102016073 melanoma-associated antigen 8-like NW_004955498 1940940 1953978 - 102016073 AGCD01062755;GBDF01223932;XM_013505521 XP_013360975 MODEL 39132647 snrna U6 U6 spliceosomal RNA 9003502 ncrna LOC102025326 uncharacterized LOC102025326 NW_004955409 8371307 8391398 + 102025326 AGCD01009402;AGCD01009403;AGCD01009404;AGCD01009405;AGCD01009406;GBDF01190789;XR_001232688;XR_259758 MODEL 8883978 protein-coding Lrwd1 leucine rich repeats and WD repeat domain containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K27me3 reader activity (ortholog); methyl-CpG binding (ortholog); INVOLVED IN chromatin organization (ortholog); establishment of protein localization to chromatin (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); kinetochore (ortholog); nuclear origin of replication recognition complex (ortholog) NW_004955456 15151275 15158332 - 102014419 AGCD01046662;GBDF01088635;XM_005396833 XP_005396890 MODEL 8977058 protein-coding Rab33b RAB33B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); intra-Golgi vesicle-mediated transport (ortholog); negative regulation of constitutive secretory pathway (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH genetic disease (ortholog); osteochondrodysplasia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi lumen (ortholog); Golgi membrane (ortholog) NW_004955428 4192357 4211740 - 102017898 AGCD01027670;GBDF01144317;XM_005386688 XP_005386745 MODEL 39132303 snrna U6 U6 spliceosomal RNA 8907303 ncrna LOC102020289 uncharacterized LOC102020289 NW_004955441 9225389 9274569 - 102020289 AGCD01037015;XR_262062 MODEL 8729454 protein-coding Guca2b guanylate cyclase activator 2B INVOLVED IN adipose tissue development (ortholog); body fluid secretion (ortholog); cGMP metabolic process (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH end stage renal disease (ortholog); nephrotic syndrome (ortholog) NW_004955537 1798249 1801673 + 102008257 AGCD01070905;GBCQ01015292;XM_005410592 XP_005410649 MODEL 8934411 protein-coding Scn5a sodium voltage-gated channel alpha subunit 5 ENCODES a protein that exhibits ankyrin binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN atrial cardiac muscle cell action potential (ortholog); AV node cell action potential (ortholog); AV node cell to bundle of His cell communication (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); FOUND IN anchoring junction (ortholog); caveola (ortholog); cell surface (ortholog) NW_004955427 25295517 25371419 + 102030218 AGCD01027538;GBCE01158045;XM_005386578;XM_005386579;XM_005386580;XM_005386584;XM_005386585;XM_005386587;XM_013515220;XM_013515221 XP_005386635;XP_005386636;XP_005386637;XP_005386641;XP_005386642;XP_005386644;XP_013370674;XP_013370675 MODEL 9032292 protein-coding LOC102009408 von Ebner gland protein 1-like NW_004955513 2571693 2576942 + 102009408 AGCD01066882;GBBH01002065;XM_005408419 XP_005408476 MODEL 8959545 protein-coding Xrn2 5'-3' exoribonuclease 2 ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); 5'-3' RNA exonuclease activity (ortholog); identical protein binding (ortholog); INVOLVED IN hippocampus development (ortholog); neuron differentiation (ortholog); retina development in camera-type eye (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; ribosome biogenesis pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955415 29107060 29175374 + 102023586 AGCD01016647;AGCD01016648;AGCD01016649;GBDF01082246;XM_005380952 XP_005381009 MODEL 8754332 protein-coding Il25 interleukin 25 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN eosinophil differentiation (ortholog); inflammatory response (ortholog); inflammatory response to antigenic stimulus (ortholog); ASSOCIATED WITH allergic asthma (ortholog); allergic rhinitis (ortholog); Amoebic Dysentery due to Entamoeba Histolytica (ortholog); FOUND IN extracellular region (ortholog) NW_004955409 36960902 36964038 - 102020773 AGCD01010484;XM_013510236 XP_013365690 MODEL 9057953 pseudo LOC102012982 60S ribosomal protein L5 pseudogene NW_004955503 7021624 7022501 - 102012982 AGCD01064776 MODEL 8814827 ncrna LOC102003538 uncharacterized LOC102003538 NW_004955476 203227 208111 + 102003538 AGCD01055192;GBDI01270308;XR_263615 MODEL 8811378 pseudo LOC102016074 hypoxanthine-guanine phosphoribosyltransferase-like NW_004955424 15342793 15344617 + 102016074 AGCD01024707 MODEL 39132786 snrna U6 U6 spliceosomal RNA 9017508 protein-coding Tymp thymidine phosphorylase ENCODES a protein that exhibits protein homodimerization activity (ortholog); thymidine phosphorylase activity (ortholog); INVOLVED IN dTMP catabolic process (ortholog); pyrimidine nucleoside metabolic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; capecitabine pharmacodynamics pathway; capecitabine pharmacokinetics pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Cachexia (ortholog); carcinoma (ortholog) NW_004955413 33505424 33509095 - 102005582 AGCD01014673;GBDJ01072364;XM_013511510;XM_013511511 XP_013366964;XP_013366965 MODEL 8728823 ncrna LOC102007912 uncharacterized LOC102007912 NW_004955495 2955662 2964666 + 102007912 AGCD01061813;GBDF01294554;XR_264137 MODEL 8782805 gene LOC102010596 T-cell receptor beta-1 chain C region-like NW_004955494 1000095 1115539 - 102010596 AGCD01061390;AGCD01061391;XM_005405393 MODEL 8701549 pseudo LOC102003845 E3 ubiquitin-protein ligase XIAP pseudogene NW_004955462 10272846 10275300 + 102003845 AGCD01049360 MODEL 8813111 protein-coding Rab34 RAB34, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTP-dependent protein binding (ortholog); GTPase activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to glucose stimulus (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); cervical cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955481 4441290 4445969 + 102023152 AGCD01056939;GBDF01044851;XM_005402720;XM_005402721 XP_005402777;XP_005402778 MODEL 8717588 ncrna LOC102021394 uncharacterized LOC102021394 NW_004955547 1572431 1574209 - 102021394 AGCD01072233;GBBH01184529;XR_264902 MODEL 8747822 protein-coding Gdap1l1 ganglioside induced differentiation associated protein 1 like 1 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955445 13045864 13097447 - 102021717 AGCD01039767;GBDF01053824;XM_005392484;XR_262333;XR_262334;XR_262336;XR_262337 XP_005392541 MODEL 8999801 protein-coding LOC102023167 melanoma-associated antigen 10-like NW_004955498 3160903 3189402 + 102023167 AGCD01062881;AGCD01062882;AGCD01062883;GBDF01220829;XM_005406402;XM_005406403 XP_005406459;XP_005406460 MODEL 8812671 protein-coding Tap1 transporter 1, ATP binding cassette subfamily B member ENCODES a protein that exhibits ABC-type peptide antigen transporter activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN antigen processing and presentation of endogenous peptide antigen via MHC class I (ortholog); cytosol to endoplasmic reticulum transport (ortholog); defense response (ortholog); ASSOCIATED WITH allergic disease (ortholog); ankylosing spondylitis (ortholog); asthma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955437 1504549 1511110 - 102009988 AGCD01034212;GBBH01001146;GBDJ01003324;XM_013516935 XP_013372389 MODEL 8903601 protein-coding Sap130 Sin3A associated protein 130 INVOLVED IN embryonic placenta development (ortholog); in utero embryonic development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear speck (ortholog) NW_004955459 2529373 2602864 + 102019034 AGCD01047992;AGCD01047993;GBDI01221722;XM_013521047 XP_013376501 MODEL 9050621 protein-coding Tob2 transducer of ERBB2, 2 ENCODES a protein that exhibits nuclear vitamin D receptor binding (ortholog); INVOLVED IN negative regulation of osteoclast differentiation (ortholog); positive regulation of ossification (ortholog); regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955413 26999955 27010091 - 102018277 AGCD01014490;GBCB01003439;GBDK01233769;XM_005379348 XP_005379405 MODEL 8709926 protein-coding LOC102014160 zinc finger protein 709-like NW_004955432 4036003 4057987 - 102014160 AGCD01030688;AGCD01030689;GBDI01208211;XM_013515926 XP_013371380 MODEL 8752843 protein-coding Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 ASSOCIATED WITH anemia (ortholog); autosomal recessive osteopetrosis 1 (ortholog); Bone Fractures (ortholog); FOUND IN apical plasma membrane (ortholog) NW_004955422 17768469 17778976 - 102007241 AGCD01022932;GBBH01034032;XM_005384287;XM_005384288;XM_013514039;XM_013514040 XP_005384344;XP_005384345;XP_013369493;XP_013369494 MODEL 9010354 protein-coding Cxcl14 C-X-C motif chemokine ligand 14 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); inner ear development (ortholog); negative regulation of myoblast differentiation (ortholog); ASSOCIATED WITH asthma (ortholog); Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955408 30733079 30740854 - 102009914 AGCD01008815;GBCE01002150;XM_005376477 XP_005376534 MODEL 8870365 protein-coding Larp4b La ribonucleoprotein 4B ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN positive regulation of 3'-UTR-mediated mRNA stabilization (ortholog); positive regulation of translation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog) NW_004955492 113900 197753 + 102011324 AGCD01060628;GBCQ01150926;XM_005404909;XM_005404910;XM_005404912;XM_013504697;XM_013504698;XM_013504699 XP_005404966;XP_005404967;XP_005404969;XP_013360151;XP_013360152;XP_013360153 MODEL 8728259 protein-coding LOC102009793 uncharacterized LOC102009793 NW_004955451 10468343 10479347 + 102009793 AGCD01043324;XM_013519062 XP_013374516 MODEL 39133665 snrna U4 U4 spliceosomal RNA 8738102 protein-coding Smtnl2 smoothelin like 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955467 12325436 12347569 - 102010571 AGCD01051631;GBCB01002938;XM_005399680;XM_005399681 XP_005399737;XP_005399738 MODEL 8861009 protein-coding Dnaaf19 dynein axonemal assembly factor 19 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN axonemal dynein complex assembly (ortholog); cilium movement (ortholog); determination of digestive tract left/right asymmetry (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); Kartagener syndrome (ortholog) NW_004955451 17690148 17693285 + 102018792 AGCD01043767;GBBH01124071;XM_005394546;XM_005394547;XM_005394548;XM_005394549;XM_013519374;XM_013519375;XM_013519376 XP_005394603;XP_005394604;XP_005394605;XP_005394606;XP_013374828;XP_013374829;XP_013374830 MODEL 8970269 protein-coding Sycn syncollin FOUND IN zymogen granule membrane (ortholog) NW_004955468 350601 352966 + 102014549 AGCD01051693;XM_005400287 XP_005400344 MODEL 9032679 ncrna LOC102025329 uncharacterized LOC102025329 NW_004955461 14190918 14214161 + 102025329 AGCD01049048;GBDI01306582;XR_001236562 MODEL 9021155 protein-coding Glp2r glucagon like peptide 2 receptor ENCODES a protein that exhibits glucagon receptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); pancreatic adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955467 7239547 7308809 - 102006013 AGCD01051431;AGCD01051432;AGCD01051433;GBDI01235201;XM_013522035 XP_013377489 MODEL 8941820 ncrna LOC102019237 uncharacterized LOC102019237 NW_004955405 40081412 40101110 - 102019237 AGCD01005504;GBDF01173603;XR_259450 MODEL 8734411 protein-coding Nrp2 neuropilin 2 ENCODES a protein that exhibits identical protein binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN axon extension involved in axon guidance (ortholog); axon guidance (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN axon (ortholog); extracellular region (ortholog); glutamatergic synapse (ortholog) NW_004955457 9197621 9316789 - 102019031 AGCD01046933;AGCD01046934;AGCD01046935;GBBH01033510;XM_005397004;XM_005397005;XM_005397007;XM_005397008;XM_013520730;XM_013520731;XM_013520732;XM_013520733 XP_005397061;XP_005397062;XP_005397064;XP_005397065;XP_013376184;XP_013376185;XP_013376186;XP_013376187 MODEL 8990704 protein-coding Firrm FIGNL1 interacting regulator of recombination and mitosis ENCODES a protein that exhibits protein kinase binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN chromosome segregation (ortholog); DNA recombinase disassembly (ortholog); double-strand break repair involved in meiotic recombination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN chromosome, centromeric region (ortholog); DNA repair complex (ortholog); kinetochore (ortholog) NW_004955462 7477260 7518227 - 102008071 AGCD01049305;GBDI01326759;XM_013521413;XM_013521414 XP_013376867;XP_013376868 MODEL 8866380 protein-coding Lsamp limbic system associated membrane protein INVOLVED IN locomotory exploration behavior (ortholog); ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytosol (ortholog); postsynaptic membrane (ortholog); presynaptic membrane (ortholog) NW_004955427 15871178 16475975 - 102013104 AGCD01027304;AGCD01027305;AGCD01027306;AGCD01027307;AGCD01027308;AGCD01027309;AGCD01027310;AGCD01027311;AGCD01027312;AGCD01027313;AGCD01027314;AGCD01027315;GBDJ01356430;XM_005386425;XM_005386426 XP_005386482;XP_005386483 MODEL 39133034 snrna U6 U6 spliceosomal RNA 8938752 protein-coding Tssk4 testis specific serine kinase 4 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN fertilization (ortholog); flagellated sperm motility (ortholog); spermatid development (ortholog); ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN motile cilium (ortholog); sperm flagellum (ortholog) NW_004955409 36190182 36191801 - 102008068 AGCD01010450;GBDF01003132;GBDJ01396043;XM_013510407 XP_013365861 MODEL 8810528 protein-coding Extl3 exostosin like glycosyltransferase 3 ENCODES a protein that exhibits glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); negative regulation of cytokine production involved in inflammatory response (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute necrotizing pancreatitis (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); nucleus (ortholog) NW_004955403 51076323 51102435 + 102015272 AGCD01002988;GBDF01192978;XM_005373777;XM_005373778;XM_005373779;XM_005373780 XP_005373834;XP_005373835;XP_005373836;XP_005373837 MODEL 9034724 protein-coding Six5 SIX homeobox 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH branchiootorenal syndrome (ortholog); branchiootorenal syndrome 2 (ortholog); vesicoureteral reflux (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955574 221635 225474 - 102016326 AGCD01075092;AGCD01075093;GBBH01185502;GBCE01137897;XM_013509516 XP_013364970 MODEL 8808785 protein-coding Slc9d1 solute carrier family 9 member D1 ENCODES a protein that exhibits protein-membrane adaptor activity (ortholog); INVOLVED IN positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Golgi membrane (ortholog); plasma membrane (ortholog) NW_004955404 427987 463176 - 102003934 AGCD01003201;AGCD01003202;GBCB01089585;XM_005373943;XM_013515517;XM_013515520 XP_005374000;XP_013370971;XP_013370974 MODEL 8883751 protein-coding Scn7a sodium voltage-gated channel alpha subunit 7 ENCODES a protein that exhibits osmolarity-sensing monoatomic cation channel activity (ortholog); sodium channel activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN membrane depolarization during action potential (ortholog); neuronal action potential (ortholog); osmosensory signaling pathway (ortholog); ASSOCIATED WITH autistic disorder (ortholog); brain infarction (ortholog); epilepsy (ortholog); FOUND IN glial cell projection (ortholog); plasma membrane (ortholog); voltage-gated sodium channel complex (ortholog) NW_004955449 7714424 7798383 + 102008907 AGCD01041994;AGCD01041995;AGCD01041996;AGCD01041997;GBBH01046787;XM_005393284 XP_005393341 MODEL 8780599 protein-coding Lipi lipase I ENCODES a protein that exhibits glycerophospholipase activity (ortholog); heparin binding (ortholog); INVOLVED IN lipid catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955407 16013285 16071187 - 102004244 AGCD01007202;AGCD01007203;AGCD01007204;AGCD01007205;GBDF01049474;GBDJ01190261;XM_013503778 XP_013359232 MODEL 8818532 protein-coding Tgfb1i1 transforming growth factor beta 1 induced transcript 1 ENCODES a protein that exhibits I-SMAD binding (ortholog); nuclear androgen receptor binding (ortholog); Roundabout binding (ortholog); INVOLVED IN cell fate commitment (ortholog); epithelial cell differentiation (ortholog); morphogenesis of embryonic epithelium (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN focal adhesion (ortholog) NW_004955493 8309480 8315378 + 102007026 AGCD01061290;AGCD01061291;GBDK01133943;XM_005405320;XM_005405322;XM_013504900;XM_013504901;XM_013504902;XM_013504903 XP_005405377;XP_005405379;XP_013360354;XP_013360355;XP_013360356;XP_013360357 MODEL 8964947 pseudo LOC102018807 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 pseudogene NW_004955408 8524447 8526888 - 102018807 AGCD01008220 MODEL 8881799 ncrna LOC102004579 uncharacterized LOC102004579 NW_004955411 7502512 7517533 - 102004579 AGCD01011707;GBDF01254531;XR_001232795;XR_259925 MODEL 8837990 protein-coding LOC102005291 transcription initiation factor TFIID subunit 4-like NW_004955432 22101100 22117718 + 102005291 AGCD01031246;AGCD01031247;XM_013515921 XP_013371375 MODEL 39132648 snrna U6 U6 spliceosomal RNA 8836911 ncrna LOC102014161 uncharacterized LOC102014161 NW_004955514 3250257 3253611 + 102014161 AGCD01067093;GBDF01074600;XR_264505 MODEL 8835907 protein-coding Il26 interleukin 26 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN negative regulation of epithelial cell proliferation (ortholog); positive regulation of cytokine production (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog) NW_004955458 14701471 14718980 - 102028721 AGCD01047844;AGCD01047845;GBBH01023513;XM_005397467 XP_005397524 MODEL 39131562 protein-coding BPIFA1 BPI fold containing family A member 1 39132305 snrna U6 U6 spliceosomal RNA 8986327 ncrna LOC102016076 uncharacterized LOC102016076 NW_004955425 14190112 14195622 - 102016076 AGCD01025554;GBDF01281343;XR_261140;XR_261141;XR_261142 MODEL 8735252 ncrna LOC102020291 uncharacterized LOC102020291 NW_004955442 10175563 10177047 - 102020291 AGCD01037700;GBDF01127172;XR_262131;XR_262132;XR_262133 MODEL 8715429 ncrna LOC102009800 uncharacterized LOC102009800 NW_004955407 17251314 17300456 + 102009800 AGCD01007243;AGCD01007244;AGCD01007245;AGCD01007246;GBDF01192314;XR_001231024 MODEL 8874890 protein-coding LOC102018009 anthrax toxin receptor-like NW_004955510 6344262 6376039 + 102018009 AGCD01066305;AGCD01066306;GBDJ01209437;XM_005407924;XM_005407925;XM_005407926;XM_005407927;XM_013506336 XP_005407981;XP_005407982;XP_005407983;XP_005407984;XP_013361790 MODEL 8807761 protein-coding LOC102022116 trace amine-associated receptor 7b-like NW_004955436 13096534 13097565 - 102022116 AGCD01033854;XM_005389211 XP_005389268 MODEL 10160285 ncrna LOC106147344 uncharacterized LOC106147344 NW_004955545 1585149 1595277 + 106147344 AGCD01071861;AGCD01071862;GBCE01037663;XR_001232202 MODEL 8712518 protein-coding LOC102007913 uncharacterized LOC102007913 NW_004955423 26618752 26622551 + 102007913 AGCD01024102;AGCD01024103;GBDF01148474;XM_005385372 XP_005385429 MODEL 8828498 protein-coding Slc25a16 solute carrier family 25 member 16 ENCODES a protein that exhibits coenzyme A transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN coenzyme A transport (ortholog); mitochondrial coenzyme A transmembrane transport (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 16 (ortholog); Breast Cancer, Familial (ortholog); Cerebral Visual Impairment and Intellectual Disability (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955425 20705758 20739692 - 102023054 AGCD01025754;AGCD01025755;AGCD01025756;AGCD01025757;GBCQ01100435;XM_005386098 XP_005386155 MODEL 39133035 snrna U6 U6 spliceosomal RNA 8725768 ncrna LOC102021396 uncharacterized LOC102021396 NW_004955550 1116020 1133375 + 102021396 AGCD01072549;AGCD01072550;GBDF01084147;XR_001232258 MODEL 8819281 protein-coding Gucd1 guanylyl cyclase domain containing 1 INVOLVED IN liver regeneration (ortholog); response to cAMP (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); melanoma (ortholog) NW_004955455 8010187 8021666 - 102003207 AGCD01045870;GBDI01115794;XM_005396388;XM_005396391 XP_005396445;XP_005396448 MODEL 8939535 protein-coding Kif12 kinesin family member 12 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of fatty acid biosynthetic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cilium (ortholog); extracellular exosome (ortholog); microtubule organizing center (ortholog) NW_004955419 13463861 13470703 + 102014782 AGCD01020003;GBDK01006201;XM_005382645;XM_005382646;XM_005382647;XM_005382648;XM_005382649;XM_005382650;XM_005382652;XM_005382653;XM_005382654;XM_005382655;XM_013513275;XM_013513276;XM_013513278;XR_260626;XR_260627 XP_005382702;XP_005382703;XP_005382704;XP_005382705;XP_005382706;XP_005382707;XP_005382709;XP_005382710;XP_005382711;XP_005382712;XP_013368729;XP_013368730;XP_013368732 MODEL 39131429 protein-coding TSSK4 testis specific serine kinase 4 8801985 protein-coding Xrra1 X-ray radiation resistance associated 1 INVOLVED IN response to X-ray (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955414 16825118 16893518 + 102004057 AGCD01015225;AGCD01015226;AGCD01015227;GBDF01005769;XM_005379906;XM_005379907;XM_005379909;XM_013511844 XP_005379963;XP_005379964;XP_005379966;XP_013367298 MODEL 9020185 protein-coding Six6 SIX homeobox 6 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH Isolated Microphthalmia with Cataract 2 (ortholog); myopia (ortholog); optic disc anomalies with retinal and/or macular dystrophy (ortholog) NW_004955466 9120227 9122109 - 102020896 AGCD01051028;XM_013521887 XP_013377341 MODEL 8800654 ncrna LOC102012650 uncharacterized LOC102012650 NW_004955418 28431582 28460778 - 102012650 AGCD01019438;AGCD01019439;GBDI01285082;XR_001233482;XR_260593 MODEL 39132787 snrna U6 U6 spliceosomal RNA 8826401 protein-coding LOC102003539 protocadherin beta-10 NW_004955415 12555720 12609335 - 102003539 AGCD01016200;AGCD01016201;AGCD01016202;AGCD01016203;AGCD01016204;AGCD01016205;AGCD01016206;GBCE01115691;GBDF01153200;XM_013512254 XP_013367708 MODEL 8840342 protein-coding Sycp1 synaptonemal complex protein 1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); INVOLVED IN chiasma assembly (ortholog); homologous chromosome pairing at meiosis (ortholog); lateral element assembly (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN autosome (ortholog); central element (ortholog); chromosome (ortholog) NW_004955435 18157173 18291732 + 102023069 AGCD01033393;AGCD01033394;AGCD01033395;AGCD01033396;AGCD01033397;GBDF01005452;XM_013516395 XP_013371849 MODEL 8896414 pseudo LOC102009409 unconventional prefoldin RPB5 interactor 1 pseudogene NW_004955431 245211 246820 + 102009409 AGCD01029861 MODEL 8905081 pseudo LOC102010598 60S ribosomal protein L7-like 1 pseudogene NW_004955494 4924654 4934243 - 102010598 AGCD01061515 MODEL 9049429 protein-coding Glra1 glycine receptor alpha 1 ENCODES a protein that exhibits extracellularly glycine-gated chloride channel activity (ortholog); extracellularly glycine-gated ion channel activity (ortholog); glycine binding (ortholog); INVOLVED IN acrosome reaction (ortholog); action potential (ortholog); adult walking behavior (ortholog); PARTICIPATES IN Inhibitory synaptic transmission pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); dystonia (ortholog); epilepsy (ortholog); FOUND IN calyx of Held (ortholog); endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) NW_004955408 6236092 6333166 - 102024428 AGCD01008166;AGCD01008167;AGCD01008168;AGCD01008169;AGCD01008170;AGCD01008171;AGCD01008172;GBDF01162970;XM_005376173;XM_005376174;XM_005376175;XM_005376177;XM_005376178 XP_005376230;XP_005376231;XP_005376232;XP_005376234;XP_005376235 MODEL 8725796 protein-coding LOC102023168 melanoma-associated antigen 10-like NW_004955498 4247845 4248615 - 102023168 AGCD01062979;XM_005406483 XP_005406540 MODEL 8744334 protein-coding Nrros negative regulator of reactive oxygen species ENCODES a protein that exhibits receptor ligand inhibitor activity (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN immune response (ortholog); inflammatory response (ortholog); innate immune response (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); SEIZURES, EARLY-ONSET, WITH NEURODEGENERATION AND BRAIN CALCIFICATIONS (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955420 12792173 12798645 + 102014362 AGCD01020893;GBDJ01115309;XM_005383139 XP_005383196 MODEL 8984664 pseudo LOC102012983 charged multivesicular body protein 3-like NW_004955427 345772 346720 + 102012983 AGCD01026828 MODEL 9004629 protein-coding Dync2h1 dynein cytoplasmic 2 heavy chain 1 ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); minus-end-directed microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); coronary vasculature development (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arrhythmogenic right ventricular dysplasia 10 (ortholog); asphyxiating thoracic dystrophy (ortholog); FOUND IN apical part of cell (ortholog); axoneme (ortholog); cytoplasm (ortholog) NW_004955412 6267726 6518888 + 102013071 AGCD01012671;AGCD01012672;AGCD01012673;AGCD01012674;AGCD01012675;GBCE01156315;GBCE01171445;XM_013511077 XP_013366531 MODEL 8967409 protein-coding Cxcl16 C-X-C motif chemokine ligand 16 ENCODES a protein that exhibits chemokine activity (ortholog); chemokine receptor binding (ortholog); low-density lipoprotein particle receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); positive regulation of cell growth (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog) NW_004955467 10132461 10136649 - 102010242 AGCD01051546;GBBH01064209;XM_013522132 XP_013377586 MODEL 8782306 protein-coding Lipj lipase family member J ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); pheochromocytoma/paraganglioma syndrome 1 (ortholog) NW_004955425 4337718 4368577 - 102023497 AGCD01025312;GBDF01225245;XM_005385874;XM_005385875;XM_013514896;XM_013514897;XM_013514898;XM_013514899;XM_013514900 XP_005385931;XP_005385932;XP_013370350;XP_013370351;XP_013370352;XP_013370353;XP_013370354 MODEL 8780679 protein-coding Tgfb2 transforming growth factor beta 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN ascending aorta morphogenesis (ortholog); atrial septum morphogenesis (ortholog); atrial septum primum morphogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); allergic disease (ortholog); aortic disease (ortholog); FOUND IN axon (ortholog); basement membrane (ortholog); cell surface (ortholog) NW_004955406 174949 249248 - 102006205 AGCD01005613;AGCD01005614;GBCQ01014446;XM_005374702;XM_005374703 XP_005374759;XP_005374760 MODEL 8925274 protein-coding Dnaaf2 dynein axonemal assembly factor 2 INVOLVED IN axonemal dynein complex assembly (ortholog); cilium-dependent cell motility (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Ciliary Motility Disorders (ortholog); Kartagener syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); protein folding chaperone complex (ortholog) NW_004955409 13019941 13028378 + 102029154 AGCD01009586;AGCD01009587;GBDK01015151;XM_005376838 XP_005376895 MODEL 8774824 ncrna LOC102025330 uncharacterized LOC102025330 NW_004955410 21642542 21670562 - 102025330 AGCD01011064;GBDF01276812;XR_001232740;XR_259855 MODEL 8748222 protein-coding Larp6 La ribonucleoprotein 6, translational regulator ENCODES a protein that exhibits mRNA 5'-UTR binding (ortholog); myosin binding (ortholog); RNA stem-loop binding (ortholog); INVOLVED IN positive regulation of collagen biosynthetic process (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955450 6050260 6073388 + 102010435 AGCD01042518;GBDJ01313471;XM_005393640;XM_005393641 XP_005393697;XP_005393698 MODEL 8716371 ncrna LOC102019238 uncharacterized LOC102019238 NW_004955453 3959312 3961658 - 102019238 AGCD01044670;GBDJ01054424;XR_262710 MODEL 8791883 protein-coding LOC102012651 olfactory receptor 5V1-like NW_004955418 30263575 30290368 + 102012651 AGCD01019508;AGCD01019509;AGCD01019510;AGCD01019511;XM_005382371 XP_005382428 MODEL 8782591 protein-coding LOC102003846 aldose reductase NW_004955410 33554985 33569352 + 102003846 AGCD01011372;AGCD01011373;GBCQ01005098;XM_005377536 XP_005377593 MODEL 9055335 protein-coding Fis1 fission, mitochondrial 1 ENCODES a protein that exhibits identical protein binding (ortholog); lipid binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to lipid (ortholog); cellular response to peptide (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); chronic kidney disease (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); peroxisomal membrane (ortholog) NW_004955456 16057158 16060623 + 102022568 AGCD01046686;GBBH01162039;XM_005396858 XP_005396915 MODEL 9030587 protein-coding Rab35 RAB35, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to nerve growth factor stimulus (ortholog); endosomal transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN cell projection membrane (ortholog); clathrin-coated endocytic vesicle (ortholog); clathrin-coated pit (ortholog) NW_004955455 11484557 11502630 + 102014978 AGCD01046006;AGCD01046007;GBDF01246895;XM_005396519 XP_005396576 MODEL 8883209 pseudo LOC102018010 olfactory receptor 8K3-like NW_004955511 1331160 1331970 + 102018010 AGCD01066365 MODEL 8950035 protein-coding Smu1 SMU1 DNA replication regulator and spliceosomal factor INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); U2-type precatalytic spliceosome (ortholog) NW_004955472 2570248 2600551 + 102011650 AGCD01053474;AGCD01053475;AGCD01053476;AGCD01053477;AGCD01053478;GBCQ01041948;GBDF01050088;XM_005401109 XP_005401166 MODEL 10364391 ncrna LOC106147345 uncharacterized LOC106147345 NW_004955546 1588271 1589413 + 106147345 AGCD01072073;GBDF01249396;XR_001232204 MODEL 9034505 protein-coding Gdap2 ganglioside induced differentiation associated protein 2 INVOLVED IN response to retinoic acid (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive spinocerebellar ataxia 27 (ortholog); cervical cancer (ortholog) NW_004955435 20980551 21037964 - 102010303 AGCD01033468;GBCE01057032;XM_005389060;XM_005389062;XM_005389063;XM_013516489 XP_005389117;XP_005389119;XP_005389120;XP_013371943 MODEL 8990146 protein-coding Slco1a2 solute carrier organic anion transporter family member 1A2 ENCODES a protein that exhibits transmembrane transporter activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); response to estrogen (ortholog); sodium-independent organic anion transport (ortholog); ASSOCIATED WITH cholestasis (ortholog); Dubin-Johnson syndrome (ortholog); esophageal cancer (ortholog); FOUND IN basal plasma membrane (ortholog); plasma membrane (ortholog) NW_004955413 16821808 16910511 + 102015094 AGCD01014115;AGCD01014116;AGCD01014117;GBDF01277792;XM_005379051;XM_005379052;XM_005379053 XP_005379108;XP_005379109;XP_005379110 MODEL 8884411 protein-coding Eya1 EYA transcriptional coactivator and phosphatase 1 ENCODES a protein that exhibits histone H2AXY142 phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); aorta morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH anterior segment dysgenesis (ortholog); Ataxia (ortholog); branchiooculofacial syndrome (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955444 8336071 8655041 + 102028140 AGCD01038933;AGCD01038934;AGCD01038935;AGCD01038936;AGCD01038937;AGCD01038938;AGCD01038939;AGCD01038940;AGCD01038941;AGCD01038942;AGCD01038943;GBCE01186170;XM_013518202;XM_013518203;XM_013518204;XM_013518205;XM_013518206;XM_013518207;XM_013518208;XM_013518209;XM_013518210;XM_013518211;XM_013518212;XM_013518213;XM_013518214 XP_013373656;XP_013373657;XP_013373658;XP_013373659;XP_013373660;XP_013373661;XP_013373662;XP_013373663;XP_013373664;XP_013373665;XP_013373666;XP_013373667;XP_013373668 MODEL 9050628 ncrna LOC102018808 uncharacterized LOC102018808 NW_004955409 12167060 12175776 - 102018808 AGCD01009538;GBCE01171561;XR_001232649 MODEL 39133666 snrna U4 U4 spliceosomal RNA 9065147 protein-coding Tssk6 testis specific serine kinase 6 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); sperm DNA condensation (ortholog); FOUND IN axonemal microtubule doublet inner sheath (ortholog); nucleus (ortholog); sperm flagellum (ortholog) NW_004955524 2433855 2434864 + 102014164 AGCD01068818;GBDF01008291;XM_005409638 XP_005409695 MODEL 8868197 protein-coding Tyms thymidylate synthetase ENCODES a protein that exhibits folic acid binding (ortholog); heterocyclic compound binding (ortholog); mRNA binding (ortholog); INVOLVED IN 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); cartilage development (ortholog); circadian rhythm (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; capecitabine pharmacodynamics pathway; capecitabine pharmacokinetics pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog) NW_004955402 9295862 9304952 - 102022652 AGCD01000212;GBDF01043219;GBDJ01114306;XM_013519582 XP_013375036 MODEL 8816765 protein-coding Ska1 spindle and kinetochore associated complex subunit 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment of meiotic spindle orientation (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centrosome (ortholog); kinetochore (ortholog); meiotic spindle (ortholog) NW_004955402 35382531 35395787 + 102018668 AGCD01000884;GBDF01306695;XM_005372927;XM_005372928 XP_005372984;XP_005372985 MODEL 8810677 protein-coding Kif13a kinesin family member 13A ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); Golgi to plasma membrane protein transport (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); apraxia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); endosome membrane (ortholog); midbody (ortholog) NW_004955483 8191514 8366645 + 102019504 AGCD01057831;AGCD01057832;AGCD01057833;GBCQ01102016;XM_005403395;XM_013503818;XM_013503819 XP_005403452;XP_013359272;XP_013359273 MODEL 8750062 protein-coding Lsg1 large 60S subunit nuclear export GTPase 1 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN nuclear export (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955420 14216430 14244289 + 102027531 AGCD01020933;AGCD01020934;GBDF01160483;XM_005383186 XP_005383243 MODEL 39132306 snrna U6 U6 spliceosomal RNA 9029836 protein-coding LOC102009805 translation initiation factor IF-2-like NW_004955408 1538854 1542633 - 102009805 AGCD01007963;AGCD01007964;GBCE01168250;XM_013507120 XP_013362574 MODEL 8770878 protein-coding Bpifa1 BPI fold containing family A member 1 INVOLVED IN killing of cells of another organism; positive regulation of acute inflammatory response; surfactant homeostasis; ASSOCIATED WITH Inflammation; Breast Cancer, Familial (ortholog); fetal alcohol spectrum disorder (ortholog); FOUND IN extracellular region; microvillus (ortholog) NW_004955422 28063077 28069939 - 102030434 AGCD01023343;FJ830605;GBBH01004310;NM_001282365;XM_013513811;XM_013513812;XM_013513813 ACZ02414;NP_001269294;XP_013369265;XP_013369266;XP_013369267 PROVISIONAL 8849123 protein-coding LOC102016078 lysozyme-like protein 1 ASSOCIATED WITH Hereditary Adrenocortical Carcinoma (ortholog) NW_004955429 21543970 21562921 + 102016078 AGCD01029005;AGCD01029006;GBDF01045217;XM_005387179;XM_005387180;XM_005387181 XP_005387236;XP_005387237;XP_005387238 MODEL 8921737 protein-coding Sap18 Sin3A associated protein 18 INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); positive regulation of apoptotic process (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN ASAP complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955497 1862026 1869974 + 102010920 AGCD01062478;AGCD01062479;GBBH01031880;GBDF01000571;XM_013505506 XP_013360960 MODEL 8718847 protein-coding Tap2 transporter 2, ATP binding cassette subfamily B member ENCODES a protein that exhibits ABC-type peptide antigen transporter activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN antigen processing and presentation of endogenous peptide antigen via MHC class I (ortholog); antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent (ortholog); antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Alzheimer's disease (ortholog); ankylosing spondylitis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955437 1480217 1499032 - 102022851 AGCD01034211;AGCD01034212;GBDK01022859;XM_013516933;XM_013516934 XP_013372387;XP_013372388 MODEL 8713107 protein-coding Toe1 target of EGR1, exonuclease ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); poly(A)-specific ribonuclease activity (ortholog); snRNA binding (ortholog); INVOLVED IN snRNA 3'-end processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog) NW_004955464 12924185 12927567 - 102003324 AGCD01050240;GBDK01239343;XM_005398712;XM_013521661 XP_005398769;XP_013377115 MODEL 8722766 protein-coding Tcl1a TCL1 family AKT coactivator A ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN gene expression (ortholog); intracellular signal transduction (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); T-cell acute lymphoblastic leukemia (ortholog); FOUND IN cell cortex (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955438 16934650 16952926 + 102015770 AGCD01035425;AGCD01035426;GBDJ01309630;XM_013517147 XP_013372601 MODEL 39133036 snrna U6 U6 spliceosomal RNA 8989246 protein-coding Slc25a17 solute carrier family 25 member 17 ENCODES a protein that exhibits ADP transmembrane transporter activity (ortholog); AMP transmembrane transporter activity (ortholog); ATP transmembrane transporter activity (ortholog); INVOLVED IN ATP transport (ortholog); fatty acid beta-oxidation (ortholog); fatty acid transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); peroxisomal membrane (ortholog); peroxisome (ortholog) NW_004955413 26423805 26474158 - 102012523 AGCD01014441;AGCD01014442;AGCD01014443;AGCD01014444;AGCD01014445;GBDI01136067;XM_005379328 XP_005379385 MODEL 8765714 pseudo LOC102010601 28S ribosomal protein S36, mitochondrial pseudogene NW_004955497 1775669 1783185 - 102010601 AGCD01062473 MODEL 8807813 protein-coding Scn8a sodium voltage-gated channel alpha subunit 8 ENCODES a protein that exhibits sodium ion binding (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN action potential (ortholog); adult walking behavior (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); acute myeloid leukemia (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); cytoplasmic vesicle (ortholog) NW_004955547 2086215 2201300 + 102026263 AGCD01072256;AGCD01072257;AGCD01072258;AGCD01072259;AGCD01072260;GBDF01162571;XM_005411910;XM_005411911;XM_005411914;XM_005411915;XM_005411916;XM_013508490;XR_001232232;XR_001232233 XP_005411967;XP_005411968;XP_005411971;XP_005411972;XP_005411973;XP_013363944 MODEL 8827915 pseudo LOC102005294 stromal membrane-associated protein 1 pseudogene NW_004955521 63437 64755 + 102005294 AGCD01068128 MODEL 8915277 protein-coding LOC102004582 vomeronasal type-1 receptor 4-like NW_004955465 12768775 12769713 + 102004582 AGCD01050559;XM_005398944 XP_005399001 MODEL 8984120 pseudo LOC102023172 transcription elongation factor B polypeptide 1-like NW_004955426 18301576 18302031 - 102023172 AGCD01026519 MODEL 39132650 snrna U6 U6 spliceosomal RNA 9003348 protein-coding LOC102021397 olfactory receptor 4K15-like NW_004955550 492121 493077 - 102021397 AGCD01072509;XM_005412131 XP_005412188 MODEL 8762936 ncrna LOC102014163 uncharacterized LOC102014163 NW_004955435 8361372 8392355 + 102014163 AGCD01033001;GBCQ01143546;XR_261671 MODEL 8964187 protein-coding Il27 interleukin 27 ENCODES a protein that exhibits interleukin-27 receptor binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN positive regulation of defense response to virus by host (ortholog); positive regulation of type II interferon production (ortholog); regulation of T cell proliferation (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); Arenaviridae infectious disease (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955493 6712005 6717417 - 102016819 AGCD01061131;GBDK01404205;XM_005405170 XP_005405227 MODEL 8742145 pseudo LOC102012984 small acidic protein-like NW_004955428 6319241 6325753 + 102012984 AGCD01027734 MODEL 8911366 protein-coding Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); cytidylate cyclase activity (ortholog); guanylate cyclase activity (ortholog); INVOLVED IN cGMP biosynthetic process (ortholog); nitric oxide-cGMP-mediated signaling (ortholog); positive regulation of nitric oxide-cGMP mediated signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); guanylate cyclase complex, soluble (ortholog) NW_004955471 11367318 11422199 - 102014661 AGCD01053253;GBDJ01175122;XM_005400950 XP_005401007 MODEL 8925452 protein-coding Gde1 glycerophosphodiester phosphodiesterase 1 ENCODES a protein that exhibits glycerophosphodiester phosphodiesterase activity (ortholog); glycerophosphoinositol glycerophosphodiesterase activity (ortholog); phosphatidylcholine lysophospholipase A1 activity (ortholog); INVOLVED IN ethanolamine metabolic process (ortholog); N-acylethanolamine metabolic process (ortholog); phospholipid metabolic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH colorectal cancer (ortholog); Familial Prostate Cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955442 3186440 3219092 - 102008150 AGCD01037499;AGCD01037500;GBCQ01062110;XM_005391107 XP_005391164 MODEL 39132788 snrna U6 U6 spliceosomal RNA 8750609 protein-coding Eya2 EYA transcriptional coactivator and phosphatase 2 ENCODES a protein that exhibits histone H2AXY142 phosphatase activity (ortholog); magnesium ion binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway in absence of ligand (ortholog); mitochondrial outer membrane permeabilization (ortholog); striated muscle tissue development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955445 10368869 10520246 - 102015786 AGCD01039672;AGCD01039673;AGCD01039674;AGCD01039675;GBDI01137306;XM_013518289 XP_013373743 MODEL 9013517 protein-coding Cxcl17 C-X-C motif chemokine ligand 17 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); INVOLVED IN cell migration (ortholog); chemokine-mediated signaling pathway (ortholog); leukocyte chemotaxis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN extracellular region (ortholog) NW_004955555 495437 509788 + 102020166 AGCD01073034;AGCD01073035;GBBH01002398;XM_005412354 XP_005412411 MODEL 9040632 pseudo LOC102022120 THAP domain-containing protein 5-like NW_004955536 1401488 1402761 + 102022120 AGCD01070756 MODEL 9007323 protein-coding Lipk lipase family member K ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955425 4215214 4247584 - 102021147 AGCD01025310;GBCC01021426;XM_005385864;XM_005385865;XM_005385866;XM_005385868;XM_013514918;XM_013514919 XP_005385921;XP_005385922;XP_005385923;XP_005385925;XP_013370372;XP_013370373 MODEL 8761239 protein-coding Sycp2 synaptonemal complex protein 2 INVOLVED IN animal organ morphogenesis (ortholog); female meiotic nuclear division (ortholog); fertilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); lateral element (ortholog); nucleus (ortholog) NW_004955528 3809438 3887055 + 102007931 AGCD01069611;AGCD01069612;AGCD01069613;GBDF01006669;XM_005410044;XM_013507426;XM_013507427 XP_005410101;XP_013362880;XP_013362881 MODEL 8760632 protein-coding LOC102019240 quinone oxidoreductase-like protein 2 NW_004955406 17523170 17559805 - 102019240 AGCD01006011;AGCD01006012;GBCQ01041000;XM_005374910;XM_013521021 XP_005374967;XP_013376475 MODEL 8830818 protein-coding Glra2 glycine receptor alpha 2 ENCODES a protein that exhibits extracellularly glycine-gated chloride channel activity (ortholog); glycine binding (ortholog); glycine-gated chloride ion channel activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to ethanol (ortholog); cellular response to zinc ion (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); familial erythrocytosis 3 (ortholog); genetic disease (ortholog); FOUND IN GABA-ergic synapse (ortholog); glycinergic synapse (ortholog); plasma membrane (ortholog) NW_004955519 3492313 3682028 - 102020369 AGCD01067960;AGCD01067961;AGCD01067962;AGCD01067963;AGCD01067964;XM_005409181;XM_005409182;XM_013506979 XP_005409238;XP_005409239;XP_013362433 MODEL 8810755 protein-coding Lsm1 LSM1 homolog, mRNA degradation associated ENCODES a protein that exhibits mRNA binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); negative regulation of neuron differentiation (ortholog); stem cell population maintenance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FICUS syndrome (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955463 13775639 13788784 - 102019988 AGCD01049886;GBCE01152341;XM_005398433;XM_005398434;XM_005398435;XM_005398436 XP_005398490;XP_005398491;XP_005398492;XP_005398493 MODEL 8849935 protein-coding Nrsn1 neurensin 1 INVOLVED IN nervous system development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); urinary bladder cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); growth cone (ortholog); neuron projection (ortholog) NW_004955483 2795319 2812860 - 102012967 AGCD01057690;GBDI01085364;XM_005403376;XM_005403377 XP_005403433;XP_005403434 MODEL 9004737 protein-coding Slco1c1 solute carrier organic anion transporter family member 1C1 ENCODES a protein that exhibits bile acid transmembrane transporter activity (ortholog); thyroid hormone transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); positive regulation of thyroid hormone generation (ortholog); thyroid hormone transport (ortholog); PARTICIPATES IN multispecific organic anion transporter mediated transport pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); primary biliary cholangitis (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955413 16654655 16705638 + 102013812 AGCD01014108;AGCD01014109;XM_005379046;XM_005379049 XP_005379103;XP_005379106 MODEL 8940433 pseudo LOC102020295 mitochondrial uncoupling protein 2 pseudogene NW_004955442 19239377 19240202 - 102020295 AGCD01038044 MODEL 39132651 snrna U6 U6 spliceosomal RNA 8708144 protein-coding Tgfb3 transforming growth factor beta 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); cell-cell junction organization (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN glypican signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH aortic valve insufficiency (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955438 33129 55180 - 102026475 AGCD01034940;GBCE01098971;XM_005390146 XP_005390203 MODEL 9062925 pseudo LOC102009413 protein PBDC1 pseudogene NW_004955433 10564178 10564675 + 102009413 AGCD01031632 MODEL 8948621 ncrna LOC102007919 uncharacterized LOC102007919 NW_004955501 6607112 6613567 - 102007919 AGCD01064198;GBDF01156852;XR_264255 MODEL 8899282 protein-coding Larp7 La ribonucleoprotein 7, transcriptional regulator ENCODES a protein that exhibits 7SK snRNA binding (ortholog); U6 snRNA binding (ortholog); INVOLVED IN box C/D sno(s)RNA 3'-end processing (ortholog); germ cell proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Alazami Syndrome (ortholog); allergic contact dermatitis (ortholog); Arnold-Chiari Malformation (ortholog); FOUND IN 7SK snRNP (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955457 14178674 14200164 - 102019245 AGCD01047061;AGCD01047062;GBCQ01067465;XM_005397097;XM_005397098 XP_005397154;XP_005397155 MODEL 8889751 protein-coding Fitm1 fat storage inducing transmembrane protein 1 ENCODES a protein that exhibits diacylglycerol binding (ortholog); triglyceride binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); lipid droplet formation (ortholog); lipid droplet organization (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955409 36267121 36268462 - 102011845 AGCD01010454;GBDK01305527;XM_005377045 XP_005377102 MODEL 8858150 protein-coding Rab36 RAB36, member RAS oncogene family NW_004955455 7574376 7590024 + 102023775 AGCD01045861;GBDI01171154;XM_005396362;XM_005396363;XM_005396364;XM_013520319;XR_262841 XP_005396419;XP_005396420;XP_005396421;XP_013375773 MODEL 8897308 pseudo LOC102018013 protein AF-9 pseudogene NW_004955432 1643335 1645310 + 102018013 AGCD01030603 MODEL 8772136 protein-coding Cxcl8 C-X-C motif chemokine ligand 8 ENCODES a protein that exhibits chemokine activity (ortholog); CXCR chemokine receptor binding (ortholog); cytokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN chemokine (C-X-C motif) ligand 8 signaling pathway; mTOR signaling pathway; syndecan signaling pathway; ASSOCIATED WITH otitis media; acute asthma (ortholog); Acute Lung Injury (ortholog); FOUND IN extracellular region (ortholog); G protein-coupled receptor complex (ortholog); membrane (ortholog) NW_004955474 247326 250355 + 102003438 AGCD01054209;GBBH01138820;XM_013502794 XP_013358248 MODEL 10251909 pseudo LOC106147346 zinc finger protein 791 pseudogene NW_004955546 495731 496540 + 106147346 AGCD01071993 MODEL 8957766 protein-coding Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 ENCODES a protein that exhibits DNA N-glycosylase activity (ortholog); identical protein binding (ortholog); oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity (ortholog); INVOLVED IN base-excision repair (ortholog); DNA repair (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955458 1432988 1449019 - 102030502 AGCD01047179;AGCD01047180;GBCQ01129502;XM_005397208;XM_013521018;XM_013521019 XP_005397265;XP_013376472;XP_013376473 MODEL 8845469 pseudo LOC102010608 RWD domain-containing protein 1 pseudogene NW_004955429 4973092 4973820 - 102010608 AGCD01028499 MODEL 8780185 ncrna LOC102018813 uncharacterized LOC102018813 NW_004955462 2479323 2494809 + 102018813 AGCD01049169;GBDJ01029436;XR_001236615 MODEL 9008630 pseudo LOC102005302 protein C3orf33 pseudogene NW_004955438 15478440 15479305 - 102005302 AGCD01035370 MODEL 8970529 protein-coding LOC102025331 cleavage stimulation factor subunit 2 tau variant-like NW_004955462 1290389 1314225 - 102025331 AGCD01049111;AGCD01049112;XM_005398315 XP_005398372 MODEL 10317829 protein-coding Ska2 spindle and kinetochore associated complex subunit 2 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment of meiotic spindle orientation (ortholog); mitotic metaphase chromosome alignment (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN kinetochore (ortholog); meiotic spindle (ortholog); outer kinetochore (ortholog) NW_004955451 3839978 3862200 + 106149657 AGCD01043075;AGCD01043076;AGCD01043077;GBDF01087363;XM_013519227 XP_013374681 MODEL 9002324 protein-coding Il27ra interleukin 27 receptor subunit alpha ENCODES a protein that exhibits interleukin-27 receptor activity (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); negative regulation of cellular extravasation (ortholog); negative regulation of interleukin-17 production (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); asthma (ortholog); cervical cancer (ortholog); FOUND IN humanin receptor complex (ortholog); plasma membrane (ortholog); signaling receptor complex (ortholog) NW_004955415 32749682 32762532 + 102009171 AGCD01016732;GBBH01006488;XM_005381079;XM_005381080;XM_005381081;XM_005381082 XP_005381136;XP_005381137;XP_005381138;XP_005381139 MODEL 8786886 protein-coding Tyr tyrosinase ENCODES a protein that exhibits copper ion binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cell population proliferation (ortholog); developmental pigmentation (ortholog); eye pigmentation (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH Abdominal Pain (ortholog); acute lymphoblastic leukemia (ortholog); Albinism (ortholog); FOUND IN cytoplasm (ortholog); melanosome (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955414 4244035 4314001 - 102005248 AGCD01014860;GBDF01275950;XM_005379730 XP_005379787 MODEL 39132789 snrna U6 U6 spliceosomal RNA 8756232 protein-coding LOC102012655 PRAME family member 9/15-like NW_004955486 31204 93920 - 102012655 AGCD01058788;AGCD01058789;AGCD01058790;AGCD01058791;AGCD01058792;AGCD01058793;AGCD01058794;AGCD01058795;AGCD01058796;AGCD01058797;AGCD01058798;AGCD01058799;AGCD01058800;GBBH01072713;XM_013504133 XP_013359587 MODEL 8815109 protein-coding Gucy1a2 guanylate cyclase 1 soluble subunit alpha 2 ENCODES a protein that exhibits guanylate cyclase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of nitric oxide-cGMP mediated signal transduction (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); clear cell renal cell carcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytosol (ortholog); guanylate cyclase complex, soluble (ortholog) NW_004955412 9218029 9480333 - 102013401 AGCD01012731;AGCD01012732;AGCD01012733;AGCD01012734;AGCD01012735;AGCD01012736;AGCD01012737;AGCD01012738;GBDI01045304;XM_005378617 XP_005378674 MODEL 8797383 protein-coding LOC102003847 NADH-cytochrome b5 reductase-like ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); melanoma (ortholog) NW_004955464 5065935 5087968 + 102003847 AGCD01049998;AGCD01049999;GBDJ01349008;XM_005398530;XM_005398531;XM_013521665 XP_005398587;XP_005398588;XP_013377119 MODEL 8748204 protein-coding LOC102009806 inner nuclear membrane protein Man1 NW_004955458 11884435 11954683 + 102009806 AGCD01047763;AGCD01047764;GBBH01024965;GBCE01008629;XM_013520993 XP_013376447 MODEL 8891171 protein-coding Bpifa3 BPI fold containing family A member 3 ASSOCIATED WITH sarcoma (ortholog) NW_004955422 28076137 28087162 - 102003034 AGCD01023343;GBDF01046147;XM_005384851 XP_005384908 MODEL 8997577 pseudo LOC102022132 geranylgeranyl transferase type-1 subunit beta pseudogene NW_004955561 354024 359834 + 102022132 AGCD01073821 MODEL 8972534 protein-coding Xtbd1 XRN2 binding domain containing 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955408 5581512 5587473 - 102016023 AGCD01008142;AGCD01008143;GBCQ01006641;XM_005376150 XP_005376207 MODEL 8870476 protein-coding LOC102016079 membrane-spanning 4-domains subfamily A member 4A-like NW_004955511 4468774 4487669 - 102016079 AGCD01066504;AGCD01066505;GBDK01165264;XM_005408077 XP_005408134 MODEL 8874968 protein-coding Sap25 Sin3A associated protein 25 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); FOUND IN nucleus (ortholog) NW_004955573 328212 329897 + 102021060 AGCD01074975;GBDI01003810;XM_005413719;XM_005413720;XM_005413721 XP_005413776;XP_005413777;XP_005413778 MODEL 8936504 protein-coding Lipm lipase family member M ASSOCIATED WITH esophageal cancer (ortholog); sarcoma (ortholog) NW_004955425 4150780 4170912 - 102020139 AGCD01025310;GBCC01000396;XM_005385861 XP_005385918 MODEL 8791703 protein-coding Dync2i1 dynein 2 intermediate chain 1 ENCODES a protein that exhibits dynein light chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); embryonic skeletal system morphogenesis (ortholog); intraciliary retrograde transport (ortholog); ASSOCIATED WITH acne (ortholog); acute myeloid leukemia (ortholog); Apnea (ortholog); FOUND IN centrosome (ortholog); ciliary base (ortholog); cilium (ortholog) NW_004955579 1056291 1124623 + 102006724 AGCD01075565;AGCD01075566;AGCD01075567;AGCD01075568;AGCD01075569;AGCD01075570;GBBH01208310;GBDI01257019;XM_013509671 XP_013365125 MODEL 8826739 ncrna LOC102019243 uncharacterized LOC102019243 NW_004955406 11927100 11938294 + 102019243 AGCD01005898;XR_001236357 MODEL 8840426 pseudo LOC102023174 band 4.1-like protein 4A NW_004955505 7419575 7423414 + 102023174 AGCD01065207 MODEL 9028822 protein-coding Scn9a sodium voltage-gated channel alpha subunit 9 ENCODES a protein that exhibits voltage-gated sodium channel activity (ortholog); INVOLVED IN action potential propagation (ortholog); behavioral response to formalin induced pain (ortholog); behavioral response to pain (ortholog); ASSOCIATED WITH asthma (ortholog); autistic disorder (ortholog); autosomal recessive congenital indifference to pain (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); node of Ranvier (ortholog) NW_004955449 7858156 8017569 + 102010648 AGCD01042004;AGCD01042005;AGCD01042006;AGCD01042007;GBBH01096669;XM_005393289 XP_005393346 MODEL 39133667 snrna U4 U4 spliceosomal RNA 8992267 pseudo LOC102003541 60S acidic ribosomal protein P1 pseudogene NW_004955416 7907212 7907681 + 102003541 AGCD01017018;XM_005381274 MODEL 8888458 protein-coding Tst thiosulfate sulfurtransferase ENCODES a protein that exhibits 5S rRNA binding (ortholog); INVOLVED IN cellular detoxification of nitrogen compound (ortholog); epithelial cell differentiation (ortholog); rRNA import into mitochondrion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colitis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955413 23528468 23534890 - 102025559 AGCD01014332;GBCB01007472;XM_005379180 XP_005379237 MODEL 8893254 protein-coding Nrsn2 neurensin 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); FOUND IN cytoplasmic vesicle (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) NW_004955597 236247 241754 + 102020861 AGCD01076548;GBDF01128357;XM_005414719 XP_005414776 MODEL 9012362 protein-coding Dnaaf3 dynein axonemal assembly factor 3 INVOLVED IN axonemal dynein complex assembly (ortholog); brain development (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog) NW_004955567 1030467 1036562 + 102004018 AGCD01074454;AGCD01074455;GBBH01001932;GBDI01070144;XM_005413352 XP_005413409 MODEL 10394113 protein-coding LOC106147347 zinc finger protein 709-like NW_004955546 542240 568689 - 106147347 AGCD01071998;AGCD01071999;AGCD01072000;AGCD01072001;GBDF01229920;XM_013508371 XP_013363825 MODEL 8990662 protein-coding Lsm10 LSM10, U7 small nuclear RNA associated ENCODES a protein that exhibits histone pre-mRNA DCP binding (ortholog); U7 snRNA binding (ortholog); INVOLVED IN positive regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH Fraser syndrome 3 (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN Cajal body (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955452 14354020 14358867 - 102005216 AGCD01044466;GBDI01220071;XM_005395190;XM_005395191;XM_005395192;XM_013519572 XP_005395247;XP_005395248;XP_005395249;XP_013375026 MODEL 8723474 protein-coding Gdf10 growth differentiation factor 10 INVOLVED IN cerebellum development (ortholog); fat cell differentiation (ortholog); negative regulation of ossification (ortholog); ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); Breast Neoplasms (ortholog); melanoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955556 2185121 2195150 + 102013654 AGCD01073208;GBCE01004420;XM_005412611 XP_005412668 MODEL 8981267 protein-coding Slco2a1 solute carrier organic anion transporter family member 2A1 ENCODES a protein that exhibits prostaglandin transmembrane transporter activity (ortholog); INVOLVED IN prostaglandin transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); basal cell carcinoma (ortholog); cholangiocarcinoma (ortholog); FOUND IN basal plasma membrane (ortholog) NW_004955501 4544065 4623615 + 102025267 AGCD01064131;AGCD01064132;GBDK01017783;XM_013505788 XP_013361242 MODEL 8753097 protein-coding Kif13b kinesin family member 13B ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN regulation of axonogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955403 51378928 51536509 - 102018458 AGCD01002989;AGCD01002990;AGCD01002991;AGCD01002992;AGCD01002993;GBBH01164816;GBDF01087741;XM_013514371 XP_013369825 MODEL 8872680 protein-coding Eya3 EYA transcriptional coactivator and phosphatase 3 ENCODES a protein that exhibits chromatin binding (ortholog); histone H2AXY142 phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN double-strand break repair (ortholog); positive regulation of DNA repair (ortholog); response to ionizing radiation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 7148762 7273886 - 102011833 AGCD01044137;AGCD01044138;AGCD01044139;AGCD01044140;AGCD01044141;AGCD01044142;GBDF01054198;XM_005394937;XM_005394938;XM_005394939;XM_005394940;XM_013519541;XM_013519542 XP_005394994;XP_005394995;XP_005394996;XP_005394997;XP_013374995;XP_013374996 MODEL 8729650 protein-coding Tgfbi transforming growth factor beta induced ENCODES a protein that exhibits collagen binding (ortholog); extracellular matrix binding (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); cell adhesion (ortholog); chondrocyte differentiation (ortholog); ASSOCIATED WITH amblyopia (ortholog); astigmatism (ortholog); Breast Cancer, Familial (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955408 31093450 31124715 + 102014537 AGCD01008821;GBBH01034064;XM_005376495 XP_005376552 MODEL 8702991 protein-coding LOC102007924 olfactory receptor 5B12-like NW_004955511 3402858 3403802 + 102007924 AGCD01066460;XM_005408265 XP_005408322 MODEL 730469357 misc_rna TCL6_1 T-cell leukemia/lymphoma 6 conserved region 1 39133037 snrna U6 U6 spliceosomal RNA 8774905 protein-coding Tapbp TAP binding protein ENCODES a protein that exhibits molecular adaptor activity (ortholog); peptide antigen binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent (ortholog); defense response (ortholog); MHC class I protein complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog); MHC class I peptide loading complex (ortholog) NW_004955437 1860057 1865645 - 102003584 AGCD01034240;GBDI01163633;GBDK01008349;XM_005389485 XP_005389542 MODEL 39131398 protein-coding FITM2 fat storage inducing transmembrane protein 2 8921245 protein-coding Slc25a18 solute carrier family 25 member 18 ENCODES a protein that exhibits amino acid:proton symporter activity (ortholog); INVOLVED IN L-glutamate transmembrane transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); sarcoma (ortholog); thymoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955454 5648255 5668754 + 102003409 AGCD01045179;AGCD01045180;GBDI01215966;XM_005395974;XM_005395975;XM_005395977 XP_005396031;XP_005396032;XP_005396034 MODEL 8969219 ncrna LOC102004585 uncharacterized LOC102004585 NW_004955466 1410513 1420772 - 102004585 AGCD01050705;GBDF01121150;XR_263275 MODEL 8814636 protein-coding LOC102021406 histone H2A INVOLVED IN mRNA processing (ortholog); nucleosome assembly (ortholog); FOUND IN chromosome (ortholog); euchromatin (ortholog); nucleosome (ortholog) NW_004955593 911641 911919 + 102021406 AGCD01076404;GBDF01010904;GBDJ01218416;XM_005414637 XP_005414694 MODEL 8963477 protein-coding LOC102016081 olfactory receptor 8H1-like NW_004955511 1201311 1202258 + 102016081 AGCD01066360;XM_013506367 XP_013361821 MODEL 8916921 protein-coding Glra3 glycine receptor alpha 3 ENCODES a protein that exhibits extracellularly glycine-gated chloride channel activity (ortholog); glycine-gated chloride ion channel activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to ethanol (ortholog); cellular response to zinc ion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955403 32304178 32445135 + 102021199 AGCD01002433;AGCD01002434;AGCD01002435;GBDF01207743;XM_005373530;XM_005373531 XP_005373587;XP_005373588 MODEL 8743583 ncrna LOC102010609 uncharacterized LOC102010609 NW_004955508 2826273 2855521 + 102010609 AGCD01065798;GBBH01228727;XR_001231644 MODEL 39132308 snrna U6 U6 spliceosomal RNA 8857061 protein-coding LOC102018816 uncharacterized LOC102018816 NW_004955412 18081520 18091575 + 102018816 AGCD01012924;GBDF01160803;XM_013510954;XM_013510955;XM_013510956;XM_013510958;XM_013510959 XP_013366408;XP_013366409;XP_013366410;XP_013366412;XP_013366413 MODEL 8962314 protein-coding Smurf1 SMAD specific E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits activin receptor binding (ortholog); I-SMAD binding (ortholog); R-SMAD binding (ortholog); INVOLVED IN autophagy (ortholog); BMP signaling pathway (ortholog); cell differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); Cocaine-Related Disorders (ortholog); colon adenocarcinoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) NW_004955460 14774545 14860783 - 102025442 AGCD01048760;AGCD01048761;GBDJ01276937;XM_013521235;XM_013521236;XM_013521237;XM_013521238;XM_013521239 XP_013376689;XP_013376690;XP_013376691;XP_013376692;XP_013376693 MODEL 39132790 snrna U6 U6 spliceosomal RNA 9029231 protein-coding Il2ra interleukin 2 receptor subunit alpha ENCODES a protein that exhibits interleukin-2 binding (ortholog); interleukin-2 receptor activity (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); inflammatory response to antigenic stimulus (ortholog); interleukin-2-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); alopecia areata (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); interleukin-2 receptor complex (ortholog) NW_004955421 22642004 22694729 - 102029977 AGCD01022143;AGCD01022144;AGCD01022145;AGCD01022146;GBDJ01194803;XM_005383859;XM_005383860;XM_013513633 XP_005383916;XP_005383917;XP_013369087 MODEL 8783767 protein-coding Sycp2l synaptonemal complex protein 2 like INVOLVED IN negative regulation of programmed cell death (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN condensed chromosome, centromeric region (ortholog); lateral element (ortholog); nucleoplasm (ortholog) NW_004955465 3440106 3518840 - 102018578 AGCD01050379;AGCD01050380;AGCD01050381;GBDF01061044;XM_013521772 XP_013377226 MODEL 9006238 protein-coding Togaram1 TOG array regulator of axonemal microtubules 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); positive regulation of microtubule polymerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955409 16885564 16967865 - 102010557 AGCD01009751;AGCD01009752;AGCD01009753;AGCD01009754;AGCD01009755;AGCD01009756;GBBH01077401;XM_005376871 XP_005376928 MODEL 8867808 ncrna LOC102003849 uncharacterized LOC102003849 NW_004955412 914841 917029 + 102003849 AGCD01012505;GBDK01170246;XR_259961 MODEL 8712147 pseudo LOC102018014 endothelial differentiation-related factor 1 pseudogene NW_004955518 3788942 3789430 - 102018014 AGCD01067809 MODEL 8996615 protein-coding Lars1 leucyl-tRNA synthetase 1 ENCODES a protein that exhibits aminoacyl-tRNA deacylase activity (ortholog); glutamine-tRNA ligase activity (ortholog); GTPase activator activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to L-leucine (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955415 7923292 7983757 + 102018179 AGCD01016059;AGCD01016060;GBDF01054280;XM_005380680 XP_005380737 MODEL 39133038 snrna U6 U6 spliceosomal RNA 8961807 protein-coding Cxcl9 C-X-C motif chemokine ligand 9 ENCODES a protein that exhibits chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); chemotaxis (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); alopecia areata (ortholog); asthma (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955433 724566 731945 - 102009209 AGCD01031335;GBDK01027907;XM_005388165 XP_005388222 MODEL 8715785 protein-coding Sap30 Sin3A associated protein 30 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); skeletal muscle cell differentiation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); melanoma (ortholog); FOUND IN histone deacetylase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955403 33633028 33639271 - 102026062 AGCD01002457;AGCD01002458;GBBH01076242;GBDF01154171;XM_013513303 XP_013368757 MODEL 9038553 protein-coding LOC102019244 translation initiation factor IF-2-like NW_004955408 5772215 5775715 - 102019244 AGCD01008152;GBCB01043675;GBDF01074209;XM_013508552 XP_013364006 MODEL 9067964 ncrna LOC102005311 uncharacterized LOC102005311 NW_004955443 3210313 3216060 - 102005311 AGCD01038188;GBDF01281727;XR_262174 MODEL 9053622 protein-coding LOC102020299 keratin, type I cytoskeletal 12 NW_004955451 15302354 15307688 - 102020299 AGCD01043604;AGCD01043605;GBCQ01166155;XM_005394376 XP_005394433 MODEL 8968474 protein-coding Scnm1 sodium channel modifier 1 ENCODES a protein that exhibits enzyme binding (ortholog); FOUND IN nuclear speck (ortholog); spliceosomal complex (ortholog); U12-type catalytic step 2 spliceosome (ortholog) NW_004955588 526986 529774 + 102024628 AGCD01076115;GBDF01047456;XM_005414493 XP_005414550 MODEL 9053788 ncrna LOC102025333 uncharacterized LOC102025333 NW_004955411 5078610 5095696 - 102025333 AGCD01011593;AGCD01011594;GBDF01153961;XR_259919 MODEL 8717866 ncrna LOC102012658 uncharacterized LOC102012658 NW_004955421 25068843 25105800 + 102012658 AGCD01022227;AGCD01022228;GBCQ01032486;XR_260828 MODEL 8792355 protein-coding Tyro3 TYRO3 protein tyrosine kinase ENCODES a protein that exhibits phosphatidylinositol 3-kinase binding (ortholog); protein tyrosine kinase activity (ortholog); virus receptor activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); forebrain cell migration (ortholog); natural killer cell differentiation (ortholog); ASSOCIATED WITH 46, XX Disorders of Sex Development (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) NW_004955416 8361722 8377629 + 102008407 AGCD01017045;GBCE01008177;GBDI01185356;XM_013512649 XP_013368103 MODEL 9058657 pseudo LOC102014167 cytochrome b-c1 complex subunit 2, mitochondrial pseudogene NW_004955537 3383684 3403702 + 102014167 AGCD01070957 MODEL 8719849 protein-coding LOC102009819 splicing factor, arginine/serine-rich 19-like NW_004955413 3207197 3209122 - 102009819 AGCD01013568;GBDI01085078;XM_005378751;XM_005378752;XM_013511272;XR_001232932 XP_005378808;XP_005378809;XP_013366726 MODEL 9023794 protein-coding Xxylt1 xyloside xylosyltransferase 1 ENCODES a protein that exhibits magnesium ion binding (ortholog); manganese ion binding (ortholog); UDP-xylosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via glucose (ortholog); protein O-linked glycosylation via N-acetylgalactosamine (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955420 13781391 13921711 + 102025129 AGCD01020930;GBBH01063336;GBCB01101112;XM_013513577 XP_013369031 MODEL 8973700 protein-coding Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); cytidylate cyclase activity (ortholog); guanylate cyclase activity (ortholog); INVOLVED IN cGMP biosynthetic process (ortholog); nitric oxide-cGMP-mediated signaling (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); guanylate cyclase complex, soluble (ortholog); presynaptic active zone cytoplasmic component (ortholog) NW_004955471 11303478 11349512 - 102027291 AGCD01053251;AGCD01053252;GBCE01176249;GBDK01192094;XM_013522922 XP_013378376 MODEL 8828098 protein-coding Rab37 RAB37, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN positive regulation of autophagy (ortholog); regulation of eye photoreceptor cell development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); photoreceptor connecting cilium (ortholog); secretory granule (ortholog) NW_004955553 1580234 1638290 + 102010638 AGCD01072892;AGCD01072893;GBDJ01241647;XM_005412240;XM_005412241;XM_005412242;XM_005412243;XM_013508642 XP_005412297;XP_005412298;XP_005412299;XP_005412300;XP_013364096 MODEL 8715523 ncrna LOC102012988 uncharacterized LOC102012988 NW_004955429 20903019 20922730 - 102012988 AGCD01028992;GBDF01263063;XR_261369 MODEL 8712953 protein-coding Lipn lipase family member N ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive congenital ichthyosis 8 (ortholog); Breast Cancer, Familial (ortholog) NW_004955425 4187537 4205066 - 102020818 AGCD01025310;GBDK01267087;XM_005385863;XM_013514915 XP_005385920;XP_013370369 MODEL 8760404 protein-coding Kif14 kinesin family member 14 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); microtubule binding (ortholog); INVOLVED IN cell division (ortholog); cell proliferation in forebrain (ortholog); cerebellar cortex development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule (ortholog) NW_004955406 36732135 36791756 - 102004891 AGCD01006564;AGCD01006565;GBDI01362265;XM_013522030;XM_013522031;XM_013522033;XM_013522036;XM_013522039;XM_013522042;XR_001236838 XP_013377484;XP_013377485;XP_013377487;XP_013377490;XP_013377493;XP_013377496 MODEL 39133668 snrna U4 U4 spliceosomal RNA 8806943 protein-coding Fitm2 fat storage inducing transmembrane protein 2 ENCODES a protein that exhibits coenzyme A diphosphatase activity (ortholog); diacylglycerol binding (ortholog); triglyceride binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); fatty-acyl-CoA catabolic process (ortholog); intracellular triglyceride homeostasis (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); cholangiocarcinoma (ortholog); Developmental Disabilities (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955445 13027431 13032089 + 102021400 AGCD01039767;GBDI01219068;XM_005392483 XP_005392540 MODEL 8769037 protein-coding Tgfbr1 transforming growth factor beta receptor 1 ENCODES a protein that exhibits ATP binding (ortholog); growth factor binding (ortholog); I-SMAD binding (ortholog); INVOLVED IN angiogenesis (ortholog); angiogenesis involved in coronary vascular morphogenesis (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN altered transforming growth factor-beta Smad dependent signaling pathway; colorectal cancer pathway; glypican signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute kidney failure (ortholog); acute myeloid leukemia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) NW_004955419 26490899 26546349 - 102016055 AGCD01020410;AGCD01020411;AGCD01020412;AGCD01020413;GBDF01223975;XM_005382822;XM_005382823;XM_013513285 XP_005382879;XP_005382880;XP_013368739 MODEL 8747588 pseudo LOC102009415 cell division cycle and apoptosis regulator protein 1 pseudogene NW_004955434 8711959 8714535 + 102009415 AGCD01032265 MODEL 9059451 protein-coding Tapbpl TAP binding protein like ENCODES a protein that exhibits MHC class I protein complex binding (ortholog); INVOLVED IN negative regulation of antigen processing and presentation of peptide antigen via MHC class I (ortholog); peptide antigen assembly with MHC class I protein complex (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi membrane (ortholog) NW_004955413 4108044 4116413 + 102019490 AGCD01013600;GBDK01069809;XM_005378785;XM_005378786;XM_005378787;XM_013511329 XP_005378842;XP_005378843;XP_005378844;XP_013366783 MODEL 9055522 protein-coding LOC102004594 olfactory receptor 51E1-like NW_004955414 21006945 21009431 + 102004594 AGCD01015401;AGCD01015402;XM_005380490 XP_005380547 MODEL 8725008 protein-coding Slc25a19 solute carrier family 25 member 19 ENCODES a protein that exhibits deoxynucleotide transmembrane transporter activity (ortholog); thiamine pyrophosphate transmembrane transporter activity (ortholog); INVOLVED IN deoxynucleotide transport (ortholog); thiamine diphosphate biosynthetic process (ortholog); thiamine pyrophosphate transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Amish Lethal Microcephaly (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955553 2134715 2160777 - 102025729 AGCD01072924;AGCD01072925;AGCD01072926;AGCD01072927;AGCD01072928;AGCD01072929;GBBH01228703;XM_005412291;XM_005412292;XM_013508653 XP_005412348;XP_005412349;XP_013364107 MODEL 8854497 protein-coding Ska3 spindle and kinetochore associated complex subunit 3 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment of meiotic spindle orientation (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); kinetochore (ortholog); meiotic spindle (ortholog) NW_004955497 1874911 1896588 - 102011217 AGCD01062479;GBBH01161825;GBDF01049973;XM_013505507 XP_013360961 MODEL 8951546 protein-coding LOC102016088 general transcription factor II-I repeat domain-containing protein 2A-like NW_004955524 3387847 3391357 + 102016088 AGCD01068893;GBDF01112543;XM_005409548 XP_005409605 MODEL 8925148 pseudo LOC102021413 40S ribosomal protein S16 pseudogene NW_004955404 19244236 19244674 + 102021413 AGCD01003639 MODEL 8994483 protein-coding Tstd1 thiosulfate sulfurtransferase like domain containing 1 ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); nonpapillary renal cell carcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955468 12813116 12814651 - 102024208 AGCD01052189;GBDF01162197;XM_005400229;XM_013522524;XM_013522525 XP_005400286;XP_013377978;XP_013377979 MODEL 10332758 protein-coding Lsm11 LSM11, U7 small nuclear RNA associated ENCODES a protein that exhibits U7 snRNA binding (ortholog); INVOLVED IN mRNA 3'-end processing by stem-loop binding and cleavage (ortholog); positive regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of chromatin organization (ortholog); ASSOCIATED WITH Aicardi-Goutieres Syndrome 8 (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN histone pre-mRNA 3'end processing complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955408 11871335 11879041 + 106146269 AGCD01008320;GBCE01100505;GBDJ01025182;XM_013508827 XP_013364281 MODEL 39132309 snrna U6 U6 spliceosomal RNA 8767340 ncrna LOC102022133 uncharacterized LOC102022133 NW_004955563 1392184 1393331 + 102022133 AGCD01074145;GBDF01189491;XR_265016 MODEL 8913105 protein-coding Slco2b1 solute carrier organic anion transporter family member 2B1 ENCODES a protein that exhibits prostaglandin transmembrane transporter activity (ortholog); secondary active transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to iron ion starvation (ortholog); heme import into cell (ortholog); PARTICIPATES IN statin pharmacokinetics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955414 16615012 16664784 - 102028951 AGCD01015220;AGCD01015221;AGCD01015222;GBDJ01238886;XM_013512025;XM_013512026 XP_013367479;XP_013367480 MODEL 8716432 protein-coding Gdf11 growth differentiation factor 11 INVOLVED IN activin receptor signaling pathway (ortholog); animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); ASSOCIATED WITH COVID-19 (ortholog); esophageal cancer (ortholog); intellectual disability (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955458 3388402 3398040 + 102026079 AGCD01047301;GBBH01160450;GBDJ01213704;XM_005397510 XP_005397567 MODEL 8947921 protein-coding Eya4 EYA transcriptional coactivator and phosphatase 4 ENCODES a protein that exhibits transcription factor binding (ortholog); INVOLVED IN inner ear development (ortholog); middle ear morphogenesis (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant nonsyndromic deafness 10 (ortholog); Breast Cancer, Familial (ortholog) NW_004955436 13710366 13982379 + 102026467 AGCD01033862;AGCD01033863;AGCD01033864;AGCD01033865;AGCD01033866;AGCD01033867;GBDI01088097;XM_013516661;XM_013516663;XM_013516664;XM_013516665;XM_013516666;XM_013516667;XM_013516668;XM_013516669 XP_013372115;XP_013372117;XP_013372118;XP_013372119;XP_013372120;XP_013372121;XP_013372122;XP_013372123 MODEL 8880931 protein-coding Bpifb1 BPI fold containing family B member 1 INVOLVED IN innate immune response in mucosa (ortholog); negative regulation of toll-like receptor 4 signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955422 27955298 27976051 - 102029304 AGCD01023340;GBDI01017648;XM_005384845;XM_005384846 XP_005384902;XP_005384903 MODEL 8701661 pseudo LOC102007925 calmodulin-A pseudogene NW_004955430 14879789 14880358 + 102007925 AGCD01029580;XM_005387538 MODEL 8750291 protein-coding Skap1 src kinase associated phosphoprotein 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein phosphatase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of adaptive immune response (ortholog); positive regulation of cell adhesion (ortholog); positive regulation of cell-cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955451 12791633 13043249 + 102007962 AGCD01043430;AGCD01043431;AGCD01043432;AGCD01043433;AGCD01043434;AGCD01043435;AGCD01043436;AGCD01043437;AGCD01043438;AGCD01043439;AGCD01043440;AGCD01043441;AGCD01043442;AGCD01043443;AGCD01043444;GBDI01286676;XM_005394244;XM_005394245;XM_005394246;XM_013519393 XP_005394301;XP_005394302;XP_005394303;XP_013374847 MODEL 39132652 snrna U6 U6 spliceosomal RNA 39133039 snrna U6 U6 spliceosomal RNA 8754720 pseudo LOC102003544 arfaptin-1 pseudogene NW_004955416 645573 646813 - 102003544 AGCD01016816 MODEL 8757869 protein-coding Nrxn1 neurexin 1 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); calcium channel regulator activity (ortholog); calcium ion binding (ortholog); INVOLVED IN adult behavior (ortholog); AMPA selective glutamate receptor signaling pathway (ortholog); calcium-dependent cell-cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN axonal growth cone (ortholog); cell surface (ortholog); endocytic vesicle (ortholog) NW_004955441 16230977 17178003 - 102026572 AGCD01037268;AGCD01037269;AGCD01037270;AGCD01037271;AGCD01037272;AGCD01037273;AGCD01037274;AGCD01037275;AGCD01037276;AGCD01037277;AGCD01037278;AGCD01037279;AGCD01037280;AGCD01037281;AGCD01037282;AGCD01037283;GBDK01379530;XM_005391011;XM_005391018;XM_013517618;XM_013517619;XM_013517620;XM_013517621;XM_013517622;XM_013517623 XP_005391068;XP_005391075;XP_013373072;XP_013373073;XP_013373074;XP_013373075;XP_013373076;XP_013373077 MODEL 9004229 protein-coding Gucy2c guanylate cyclase 2C ENCODES a protein that exhibits guanylate cyclase activity (ortholog); toxic substance binding (ortholog); INVOLVED IN regulation of cell population proliferation (ortholog); response to toxic substance (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955413 11410586 11489201 - 102026202 AGCD01013962;GBDJ01369733;XM_005378994;XM_005378996 XP_005379051;XP_005379053 MODEL 8861340 pseudo LOC102005312 uncharacterized LOC102005312 NW_004955443 13092892 13167982 + 102005312 AGCD01038462;AGCD01038463;AGCD01038464 MODEL 8817436 ncrna LOC102018823 uncharacterized LOC102018823 NW_004955472 1375543 1398861 - 102018823 AGCD01053390;GBDF01161710;XR_263542 MODEL 39132791 snrna U6 U6 spliceosomal RNA 730469030 misc_rna TCL6_3 T-cell leukemia/lymphoma 6 conserved region 3 8752051 protein-coding Smurf2 SMAD specific E3 ubiquitin protein ligase 2 ENCODES a protein that exhibits identical protein binding (ortholog); SMAD binding (ortholog); transforming growth factor beta receptor binding (ortholog); INVOLVED IN lysosomal protein catabolic process (ortholog); negative regulation of MyD88-dependent toll-like receptor signaling pathway (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); membrane raft (ortholog); nuclear speck (ortholog) NW_004955478 7205266 7336390 + 102027523 AGCD01055954;AGCD01055955;AGCD01055956;AGCD01055957;GBCE01117695;XM_013503133 XP_013358587 MODEL 10280215 protein-coding Sycp3 synaptonemal complex protein 3 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); chiasma assembly (ortholog); female meiosis chromosome segregation (ortholog); ASSOCIATED WITH azoospermia (ortholog); cervical cancer (ortholog); Habitual Abortions (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome (ortholog) NW_004955405 37093330 37102789 - 106149555 AGCD01005438;AGCD01005439;GBDF01000215;GBDK01355736;XM_013518728 XP_013374182 MODEL 8966792 protein-coding Togaram2 TOG array regulator of axonemal microtubules 2 ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955469 10860710 10910293 + 102016798 AGCD01052552;GBDI01259936;XM_005400540;XM_013522669 XP_005400597;XP_013378123 MODEL 8768500 protein-coding Tyrobp transmembrane immune signaling adaptor TYROBP ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); amyloid-beta clearance (ortholog); apoptotic cell clearance (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); dementia (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955468 2673657 2677633 + 102015303 AGCD01051831;AGCD01051832;GBDK01012952;XM_005399941;XM_013522542 XP_005399998;XP_013377996 MODEL 8700207 protein-coding Dync2i2 dynein 2 intermediate chain 2 ENCODES a protein that exhibits dynein light chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); intraciliary retrograde transport (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); cervical cancer (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955570 1076498 1086629 - 102030680 AGCD01074785;AGCD01074786;GBDJ01014754;XM_005413560;XM_013509405;XM_013509406;XM_013509407;XM_013509408;XM_013509409 XP_005413617;XP_013364859;XP_013364860;XP_013364861;XP_013364862;XP_013364863 MODEL 8947356 protein-coding LOC102003850 putative vomeronasal receptor-like protein 4 NW_004955465 12732451 12749417 - 102003850 AGCD01050556;AGCD01050557;AGCD01050558;GBDF01114303;XM_005398941;XM_013521802;XM_013521803;XM_013521804;XM_013521805 XP_005398998;XP_013377256;XP_013377257;XP_013377258;XP_013377259 MODEL 8873012 ncrna LOC102018016 uncharacterized LOC102018016 NW_004955433 19172341 19176616 + 102018016 AGCD01031860;XR_261599 MODEL 39133669 snrna U4 U4 spliceosomal RNA 8966521 protein-coding Lipt1 lipoyltransferase 1 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); INVOLVED IN protein lipoylation (ortholog); ASSOCIATED WITH Leigh disease (ortholog); Lipoyltransferase 1 Deficiency (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955470 5480279 5492259 + 102009933 AGCD01052751;GBDJ01048175;XM_005400739;XM_013522813 XP_005400796;XP_013378267 MODEL 8865346 protein-coding Glra4 glycine receptor alpha 4 ENCODES a protein that exhibits extracellularly glycine-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); response to amino acid (ortholog); FOUND IN glycinergic synapse (ortholog); perikaryon (ortholog); plasma membrane (ortholog) NW_004955548 712257 736279 - 102028021 AGCD01072341;GBDK01027911;XM_005411996;XM_013508522 XP_005412053;XP_013363976 MODEL 8753367 protein-coding Rab38 RAB38, member RAS oncogene family ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); AP-2 adaptor complex binding (ortholog); AP-3 adaptor complex binding (ortholog); INVOLVED IN endosome to melanosome transport (ortholog); eye pigmentation (ortholog); melanosome assembly (ortholog); ASSOCIATED WITH Albuminuria (ortholog); Hermansky-Pudlak syndrome (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cell body (ortholog); early endosome (ortholog); early endosome lumen (ortholog) NW_004955414 5158860 5214108 + 102006016 AGCD01014888;AGCD01014889;GBCQ01095846;XM_005379731 XP_005379788 MODEL 8786653 protein-coding Fiz1 FLT3 interacting zinc finger 1 ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) NW_004955567 746216 751032 + 102023083 AGCD01074430;AGCD01074431;GBDI01242402;XM_013509225 XP_013364679 MODEL 8985332 ncrna LOC102004595 uncharacterized LOC102004595 NW_004955415 837754 877703 - 102004595 AGCD01015854;AGCD01015855;GBBH01145410;XR_001233209 MODEL 8940352 protein-coding Sap30bp SAP30 binding protein ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); INVOLVED IN regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955506 6535566 6574690 - 102016620 AGCD01065430;AGCD01065431;AGCD01065432;GBDI01223301;XM_005407492;XM_005407493;XM_013505977 XP_005407549;XP_005407550;XP_013361431 MODEL 8939485 protein-coding Tapt1 transmembrane anterior posterior transformation 1 INVOLVED IN embryonic skeletal system development (ortholog); positive regulation of cilium assembly (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Bone Fractures (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog) NW_004955480 7833883 7892948 + 102011988 AGCD01056710;AGCD01056711;AGCD01056712;GBDF01053644;XM_005402514 XP_005402571 MODEL 8760565 ncrna LOC102012659 uncharacterized LOC102012659 NW_004955422 126981 128331 + 102012659 AGCD01022394;GBDF01161749;XR_260841 MODEL 8979985 ncrna LOC102016089 uncharacterized LOC102016089 NW_004955436 2444597 2454363 + 102016089 AGCD01033609;GBDF01080729;XR_261746 MODEL 8868221 ncrna LOC102023175 uncharacterized LOC102023175 NW_004955506 5745218 5748375 - 102023175 AGCD01065386;GBDF01077418;XR_001231603;XR_264360 MODEL 9028449 protein-coding Tstd2 thiosulfate sulfurtransferase like domain containing 2 ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955419 27820265 27841210 + 102023477 AGCD01020448;GBDJ01031238;XM_005382843;XM_005382844;XM_005382845;XM_005382847;XM_005382848 XP_005382900;XP_005382901;XP_005382902;XP_005382904;XP_005382905 MODEL 39132310 snrna U6 U6 spliceosomal RNA 9020403 protein-coding Gucy2d guanylate cyclase 2D, retinal ENCODES a protein that exhibits guanylate cyclase activity (ortholog); identical protein binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cGMP biosynthetic process (ortholog); cGMP metabolic process (ortholog); regulation of opsin-mediated signaling pathway (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog); photoreceptor outer segment (ortholog) NW_004955467 8938057 8949684 - 102026513 AGCD01051478;XM_005399441 XP_005399498 MODEL 8733750 protein-coding LOC102014170 potassium channel subfamily K member 16 NW_004955437 4219222 4222532 + 102014170 AGCD01034363;GBDI01386526;XM_013516721 XP_013372175 MODEL 9065615 protein-coding LOC102007926 ATP-binding cassette sub-family G member 2-like NW_004955433 518685 589650 - 102007926 AGCD01031326;AGCD01031327;AGCD01031328;AGCD01031329;GBDJ01282723;XM_005388161 XP_005388218 MODEL 8972080 protein-coding Xylb xylulokinase ENCODES a protein that exhibits D-xylulokinase activity (ortholog); INVOLVED IN xylulose metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog) NW_004955427 25492505 25528674 - 102026893 AGCD01027543;AGCD01027544;GBBH01016241;GBCQ01008840;XM_013515188 XP_013370642 MODEL 9005530 protein-coding LOC102010611 olfactory receptor 1013-like NW_004955511 1796248 1797165 + 102010611 AGCD01066380;XM_005407977 XP_005408034 MODEL 8928753 ncrna LOC102019246 uncharacterized LOC102019246 NW_004955408 33245705 33259346 + 102019246 AGCD01008864;AGCD01008865;XR_259729 MODEL 10380778 protein-coding LOC106147348 zinc finger protein 709-like NW_004955546 705381 783566 - 106147348 AGCD01072016;AGCD01072017;AGCD01072018;AGCD01072019;AGCD01072020;AGCD01072021;AGCD01072022;AGCD01072023;AGCD01072024;GBCB01035604;XM_013508395;XM_013508396;XM_013508397;XM_013508398;XM_013508399;XM_013508400 XP_013363849;XP_013363850;XP_013363851;XP_013363852;XP_013363853;XP_013363854 MODEL 9023479 protein-coding Lars2 leucyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits leucine-tRNA ligase activity (ortholog); INVOLVED IN leucyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955420 26342129 26446959 - 102008863 AGCD01021401;AGCD01021402;AGCD01021403;AGCD01021404;GBBH01102481;XM_013513567 XP_013369021 MODEL 8958331 protein-coding Skap2 src kinase associated phosphoprotein 2 INVOLVED IN negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955410 28447073 28618450 - 102028940 AGCD01011250;AGCD01011251;AGCD01011252;AGCD01011253;AGCD01011254;GBDJ01316638;XM_005377444 XP_005377501 MODEL 8738925 pseudo LOC102009416 60S ribosomal protein L13 pseudogene NW_004955435 16416187 16416933 - 102009416 AGCD01033326;XR_261708 MODEL 8890071 protein-coding Tgfbr2 transforming growth factor beta receptor 2 ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); kinase activator activity (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); animal organ regeneration (ortholog); aorta morphogenesis (ortholog); PARTICIPATES IN altered transforming growth factor-beta Smad dependent signaling pathway; colorectal cancer pathway; glypican signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); aortic aneurysm (ortholog); aortic dissection (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955430 21919338 21999688 + 102022415 AGCD01029780;AGCD01029781;GBDI01069771;XM_005387519 XP_005387576 MODEL 8746309 protein-coding Scnn1a sodium channel epithelial 1 subunit alpha ENCODES a protein that exhibits actin binding (ortholog); sodium channel activity (ortholog); sodium ion transmembrane transporter activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to aldosterone (ortholog); cellular response to salt stress (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Asthenozoospermia (ortholog); autism spectrum disorder (ortholog); FOUND IN acrosomal vesicle (ortholog); apical plasma membrane (ortholog); ciliary membrane (ortholog) NW_004955413 4000083 4023596 - 102014033 AGCD01013591;AGCD01013592;GBCE01000261;XM_005378765;XM_005378766 XP_005378822;XP_005378823 MODEL 8868165 ncrna LOC102021414 uncharacterized LOC102021414 NW_004955405 9213975 9218444 + 102021414 AGCD01004765;GBCB01021521;XR_259365 MODEL 8901726 protein-coding Slc25a20 solute carrier family 25 member 20 ENCODES a protein that exhibits carnitine:O-acyl-L-carnitine antiporter activity (ortholog); O-acyl-L-carnitine transmembrane transporter activity (ortholog); INVOLVED IN carnitine shuttle (ortholog); carnitine transmembrane transport (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); carnitine-acylcarnitine translocase deficiency (ortholog); carnitine-acylcarnitine translocase deficiency (ortholog); FOUND IN mitochondrion (ortholog) NW_004955532 902937 933675 - 102004750 AGCD01070158;AGCD01070159;GBDJ01176959;XM_005410172;XM_005410173 XP_005410229;XP_005410230 MODEL 8951949 protein-coding Il2rb interleukin 2 receptor subunit beta ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-15 receptor activity (ortholog); interleukin-2 binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-15-mediated signaling pathway (ortholog); interleukin-2-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); Animal Toxoplasmosis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); interleukin-15 receptor complex (ortholog) NW_004955413 23623567 23640245 - 102028734 AGCD01014333;GBDI01139428;XM_005379192 XP_005379249 MODEL 8760533 protein-coding Dnaaf4 dynein axonemal assembly factor 4 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); INVOLVED IN cilium movement (ortholog); determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH dyslexia (ortholog); Kartagener syndrome (ortholog); male infertility (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955409 498450 523067 + 102010554 AGCD01009153;AGCD01009154;GBBH01166208;GBDF01157322;XM_013510266;XM_013510267;XM_013510268;XM_013510269;XM_013510270 XP_013365720;XP_013365721;XP_013365722;XP_013365723;XP_013365724 MODEL 9068205 pseudo LOC102022135 olfactory receptor 5V1-like NW_004955568 1014704 1015512 - 102022135 AGCD01074537 MODEL 9011667 protein-coding Lsm12 LSM12 homolog ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955451 17194409 17213547 - 102007965 AGCD01043728;AGCD01043729;GBCE01009781;XM_005394514;XR_262623 XP_005394571 MODEL 8991684 protein-coding Slco3a1 solute carrier organic anion transporter family member 3A1 ENCODES a protein that exhibits prostaglandin transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN phenylalanine transport (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) NW_004955416 20186940 20483844 + 102016156 AGCD01017451;AGCD01017452;AGCD01017453;AGCD01017454;GBCB01043430;GBDI01297533;XM_005381597 XP_005381654 MODEL 8979794 protein-coding LOC102009822 TRIO and F-actin-binding protein NW_004955413 24125506 24147260 + 102009822 AGCD01014348;AGCD01014349;GBDI01083298;GBDK01078508;XM_005379226 XP_005379283 MODEL 9050268 protein-coding Bpifb2 BPI fold containing family B member 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955422 28233236 28251627 - 102004722 AGCD01023345;GBBH01228047;XM_005384855;XM_013513871;XM_013513872;XM_013513873;XM_013513874 XP_005384912;XP_013369325;XP_013369326;XP_013369327;XP_013369328 MODEL 9066251 protein-coding Tcn1 transcobalamin 1 ENCODES a protein that exhibits cargo receptor ligand activity (ortholog); molecular sequestering activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); megaloblastic anemia (ortholog); Transcobalamin I Deficiency (ortholog) NW_004955511 4257032 4269085 - 102014699 AGCD01066497;AGCD01066498;GBDK01411939;XM_005408073;XM_013506352 XP_005408130;XP_013361806 MODEL 9017157 protein-coding Syde1 synapse defective Rho GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); GTPase regulator activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell migration (ortholog); labyrinthine layer blood vessel development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cerebellar mossy fiber (ortholog); cytosol (ortholog); synaptic membrane (ortholog) NW_004955495 8140152 8147491 - 102010916 AGCD01062185;GBDI01353780;XM_005406088;XM_005406089 XP_005406145;XP_005406146 MODEL 8765535 protein-coding Kif15 kinesin family member 15 ASSOCIATED WITH acute myeloid leukemia (ortholog); Braddock-Carey Syndrome 2 (ortholog); Breast Cancer, Familial (ortholog) NW_004955420 26774506 26828301 - 102008630 AGCD01021431;AGCD01021432;AGCD01021433;GBBH01213614;XM_005383474;XM_013513372;XM_013513373;XM_013513374;XM_013513375 XP_005383531;XP_013368826;XP_013368827;XP_013368828;XP_013368829 MODEL 39132311 snrna U6 U6 spliceosomal RNA 39132653 snrna U6 U6 spliceosomal RNA 8701326 protein-coding LOC102018017 olfactory receptor 2J3-like NW_004955524 45694 46627 + 102018017 AGCD01068663;XM_013507226 XP_013362680 MODEL 8709496 protein-coding LOC102020311 proton-coupled amino acid transporter 1 NW_004955408 5895042 5933710 + 102020311 AGCD01008159;GBDK01305420;XM_005376161;XM_005376162 XP_005376218;XP_005376219 MODEL 9041449 ncrna LOC102025336 uncharacterized LOC102025336 NW_004955467 5045268 5051230 + 102025336 AGCD01051380;GBDF01145414;XR_263335;XR_263336 MODEL 8735859 ncrna LOC102019247 uncharacterized LOC102019247 NW_004955458 10688241 10689288 + 102019247 AGCD01047701;GBCQ01143269;XR_262993 MODEL 8702945 pseudo LOC102005316 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial pseudogene NW_004955445 11834175 11839386 - 102005316 AGCD01039717;XM_005392425 MODEL 8741357 protein-coding Nrxn2 neurexin 2 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); cell adhesion molecule binding (ortholog); neuroligin family protein binding (ortholog); INVOLVED IN adult behavior (ortholog); chemical synaptic transmission (ortholog); gephyrin clustering involved in postsynaptic density assembly (ortholog); ASSOCIATED WITH atrial heart septal defect (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN glutamatergic synapse (ortholog); protein-containing complex (ortholog) NW_004955422 20444109 20551870 + 102004395 AGCD01023081;AGCD01023082;AGCD01023083;GBCB01086466;XM_005384572;XM_005384573;XM_005384574;XM_005384575;XM_005384576;XM_005384577;XM_005384578;XM_005384579;XM_005384580;XM_005384581;XM_005384582;XM_005384583;XM_005384584;XM_005384585;XM_013514283;XM_013514285;XM_013514286;XM_013514287;XM_013514288 XP_005384629;XP_005384630;XP_005384631;XP_005384632;XP_005384633;XP_005384634;XP_005384635;XP_005384636;XP_005384637;XP_005384638;XP_005384639;XP_005384640;XP_005384641;XP_005384642;XP_013369737;XP_013369739;XP_013369740;XP_013369741;XP_013369742 MODEL 39132793 snrna U6 U6 spliceosomal RNA 8756845 ncrna LOC102012991 uncharacterized LOC102012991 NW_004955431 707760 745153 - 102012991 AGCD01029876;AGCD01029877;AGCD01029878;GBDF01223749;XR_261438;XR_261439 MODEL 8976389 protein-coding Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); facultative heterochromatin formation (ortholog); hepatocyte homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cow milk allergy (ortholog); FOUND IN chromosome, telomeric region (ortholog); ESC/E(Z) complex (ortholog); heterochromatin (ortholog) NW_004955451 16548898 16563449 - 102022246 AGCD01043690;GBCB01043891;XM_013519144 XP_013374598 MODEL 8920890 ncrna LOC102012660 uncharacterized LOC102012660 NW_004955422 11202376 11214424 - 102012660 AGCD01022751;GBDF01159067;XR_260856;XR_260857 MODEL 9035385 protein-coding Cxcr1 C-X-C motif chemokine receptor 1 ENCODES a protein that exhibits interleukin-8 binding (ortholog); interleukin-8 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); interleukin-8-mediated signaling pathway (ortholog); receptor internalization (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); cerebrotendinous xanthomatosis (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN G protein-coupled receptor complex (ortholog) NW_004955453 15181027 15196224 + 102015802 AGCD01044886;GBDF01195511;XM_005395665;XM_013519957;XM_013519958;XM_013519959 XP_005395722;XP_013375411;XP_013375412;XP_013375413 MODEL 8748452 protein-coding Slc25a21 solute carrier family 25 member 21 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); INVOLVED IN mitochondrial alpha-ketoglutarate transmembrane transport (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955409 23949794 24421944 + 102023668 AGCD01010074;AGCD01010075;AGCD01010076;AGCD01010077;AGCD01010078;AGCD01010079;AGCD01010080;AGCD01010081;AGCD01010082;AGCD01010083;GBDF01040578;XM_005376906;XM_005376907;XM_013510365;XM_013510366 XP_005376963;XP_005376964;XP_013365819;XP_013365820 MODEL 8744887 protein-coding Smyd1 SET and MYND domain containing 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); heart development (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH lung cancer (ortholog); stomach cancer (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955424 769287 800646 - 102013428 AGCD01024208;AGCD01024209;GBCB01005536;XM_005385382;XM_005385383 XP_005385439;XP_005385440 MODEL 8711048 protein-coding Tollip toll interacting protein ENCODES a protein that exhibits interleukin-1, type I receptor binding (ortholog); kinase binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); interleukin-1-mediated signaling pathway (ortholog); positive regulation of protein sumoylation (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); chronic obstructive pulmonary disease (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955476 10987223 11009134 + 102004475 AGCD01055434;AGCD01055435;GBDF01003680;XM_005401793 XP_005401850 MODEL 9035886 protein-coding LOC102003851 olfactory receptor 150-like NW_004955412 24925251 24928447 + 102003851 AGCD01013131;XM_005378411 XP_005378468 MODEL 8875618 protein-coding Tyrp1 tyrosinase related protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); tyrosinase activity (ortholog); INVOLVED IN eye development (ortholog); eye pigmentation (ortholog); melanin biosynthetic process (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Foveal Hypoplasia (ortholog); genetic disease (ortholog); FOUND IN clathrin-coated endocytic vesicle membrane (ortholog); cytoplasm (ortholog); endosome membrane (ortholog) NW_004955434 15913208 15932193 + 102012890 AGCD01032499;GBDF01054868;XM_005388689 XP_005388746 MODEL 8936266 protein-coding LOC102010612 olfactory receptor 10AG1-like NW_004955511 892359 900459 - 102010612 AGCD01066346;XM_005408216 XP_005408273 MODEL 8861228 protein-coding Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); intraciliary transport involved in cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN apical part of cell (ortholog); axoneme (ortholog); centrosome (ortholog) NW_004955441 10928577 10961194 + 102027573 AGCD01037096;AGCD01037097;AGCD01037098;GBDF01006691;XM_005390934 XP_005390991 MODEL 8806369 ncrna LOC102003546 uncharacterized LOC102003546 NW_004955417 24120365 24129898 + 102003546 AGCD01018453;GBDJ01104441;XR_260489 MODEL 39133670 snrna U4 U4 spliceosomal RNA 8890797 protein-coding LOC102018824 NACHT, LRR and PYD domains-containing protein 10 NW_004955414 23795260 23797298 - 102018824 AGCD01015525;GBDF01034039;XM_013512059 XP_013367513 MODEL 8828709 ncrna LOC102004597 uncharacterized LOC102004597 NW_004955415 12081312 12097999 + 102004597 AGCD01016184;GBCE01084010;XR_001233219;XR_001233220 MODEL 8875015 ncrna LOC102021415 uncharacterized LOC102021415 NW_004955405 29322874 29335910 + 102021415 AGCD01005251;GBDF01017084;XR_259408 MODEL 8951152 protein-coding Sap30l SAP30 like ENCODES a protein that exhibits DNA binding (ortholog); histone binding (ortholog); non-sequence-specific DNA binding, bending (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN fibrillar center (ortholog); histone deacetylase complex (ortholog); nucleolus (ortholog) NW_004955408 8827744 8832588 + 102030604 AGCD01008226;GBBH01004512;GBDI01012838;XM_005376194 XP_005376251 MODEL 8984780 pseudo LOC102016096 zinc finger protein 606 pseudogene NW_004955437 6967643 6969974 - 102016096 AGCD01034448 MODEL 8962888 protein-coding Gdf15 growth differentiation factor 15 ENCODES a protein that exhibits cytokine activity (ortholog); hormone activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to chemical stress (ortholog); energy homeostasis (ortholog); GDF15-GFRAL signaling pathway (ortholog); ASSOCIATED WITH anemia (ortholog); Cachexia (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955524 3123513 3125642 - 102022734 AGCD01068859;GBDJ01263083;XM_005409571 XP_005409628 MODEL 8859132 protein-coding Las1l LAS1 like ribosome biogenesis factor INVOLVED IN rRNA processing (ortholog); ASSOCIATED WITH anemia (ortholog); ankyloglossia (ortholog); anxiety disorder (ortholog); FOUND IN cytoplasm (ortholog); MLL1 complex (ortholog); nucleolus (ortholog) NW_004955475 5143641 5189075 - 102007655 AGCD01054905;AGCD01054906;AGCD01054907;GBCC01045813;XM_005401565;XM_005401569;XM_005401570;XM_013502834;XM_013502835;XM_013502836;XM_013502837;XM_013502838;XM_013502839;XM_013502840;XM_013502841;XM_013502842;XM_013502843;XM_013502844 XP_005401622;XP_005401626;XP_005401627;XP_013358288;XP_013358289;XP_013358290;XP_013358291;XP_013358292;XP_013358293;XP_013358294;XP_013358295;XP_013358296;XP_013358297;XP_013358298 MODEL 8721471 pseudo LOC102023176 O(6)-methylguanine-induced apoptosis 2-like NW_004955506 1972894 1985977 - 102023176 AGCD01065284;AGCD01065285;AGCD01065286 MODEL 8757861 protein-coding Tstd3 thiosulfate sulfurtransferase like domain containing 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); stomach cancer (ortholog) NW_004955411 25392449 25403237 + 102025555 AGCD01012155;GBCE01181628;GBDI01024644;XM_005377810 XP_005377867 MODEL 39133040 snrna U6 U6 spliceosomal RNA 8817798 protein-coding Lsm14a LSM14A mRNA processing body assembly factor ENCODES a protein that exhibits double-stranded DNA binding (ortholog); double-stranded RNA binding (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN defense response to virus (ortholog); mitotic spindle assembly (ortholog); negative regulation of translation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytoplasmic stress granule (ortholog) NW_004955468 3799897 3863241 + 102003331 AGCD01051870;AGCD01051871;AGCD01051872;GBDF01154139;XM_005399998;XM_005399999;XM_005400001 XP_005400055;XP_005400056;XP_005400058 MODEL 8717167 ncrna LOC102007929 uncharacterized LOC102007929 NW_004955435 5612861 5627141 + 102007929 AGCD01032892;AGCD01032893;GBDF01113740;XR_261663 MODEL 8975176 protein-coding Xylt1 xylosyltransferase 1 ENCODES a protein that exhibits protein xylosyltransferase activity (ortholog); INVOLVED IN cellular response to heat (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog); embryonic skeletal system development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog); Golgi cis cisterna (ortholog) NW_004955442 1787338 2042523 + 102030008 AGCD01037453;GBDI01292471;XM_013517878 XP_013373332 MODEL 9057896 protein-coding LOC102009418 uncharacterized LOC102009418 NW_004955528 214625 215535 - 102009418 AGCD01069515;XM_005410049 XP_005410106 MODEL 39131548 protein-coding LIPT2 lipoyl(octanoyl) transferase 2 8832916 protein-coding Fjx1 four-jointed box kinase 1 INVOLVED IN retina layer formation (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); FOUND IN extracellular region (ortholog) NW_004955422 10731004 10733522 - 102010064 AGCD01022743;AGCD01022744;GBBH01208613;XM_005384948 XP_005385005 MODEL 8733033 protein-coding Glrb glycine receptor beta ENCODES a protein that exhibits extracellularly glycine-gated chloride channel activity (ortholog); extracellularly glycine-gated ion channel activity (ortholog); glycine binding (ortholog); INVOLVED IN acrosome reaction (ortholog); adult walking behavior (ortholog); chemical synaptic transmission (ortholog); PARTICIPATES IN Inhibitory synaptic transmission pathway; ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); hyperekplexia (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); GABA-ergic synapse (ortholog) NW_004955471 10153197 10238052 - 102012186 AGCD01053227;GBDJ01354108;XM_005400944 XP_005401001 MODEL 8907599 protein-coding Ski SKI proto-oncogene ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); bone morphogenesis (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); aortic aneurysm (ortholog); atrial heart septal defect (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nuclear body (ortholog) NW_004955486 8857693 8921821 - 102008948 AGCD01059156;GBCC01038296;GBCE01052647;XM_005404174 XP_005404231 MODEL 8968484 protein-coding LOC102025337 olfactory receptor 150-like NW_004955412 24941616 24942575 + 102025337 AGCD01013131;XM_005378642 XP_005378699 MODEL 8850410 protein-coding Tgfbr3 transforming growth factor beta receptor 3 ENCODES a protein that exhibits activin binding (ortholog); BMP binding (ortholog); coreceptor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); blastocyst development (ortholog); blood vessel development (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); connective tissue disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955423 2573851 2765353 + 102027417 AGCD01023482;AGCD01023483;AGCD01023484;AGCD01023485;GBDK01071854;XM_005385062;XM_005385063 XP_005385119;XP_005385120 MODEL 8804447 protein-coding LOC102019249 olfactory receptor 6C6-like NW_004955458 2636013 2646641 - 102019249 AGCD01047240;XM_005397498;XM_013520811 XP_005397555;XP_013376265 MODEL 39132795 snrna U6 U6 spliceosomal RNA 9066802 protein-coding Il2rg interleukin 2 receptor subunit gamma ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-15 receptor activity (ortholog); interleukin-2 binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular homeostasis (ortholog); interleukin-15-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH bronchiolitis (ortholog); combined immunodeficiency (ortholog); combined T cell and B cell immunodeficiency (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); interleukin-15 receptor complex (ortholog) NW_004955475 10676592 10680565 - 102028412 AGCD01055108;AGCD01055109;GBBH01142524;GBDI01064080;XM_013502895 XP_013358349 MODEL 9017599 protein-coding Dnaaf5 dynein axonemal assembly factor 5 ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); INVOLVED IN cilium movement (ortholog); inner dynein arm assembly (ortholog); outer dynein arm assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dynein axonemal particle (ortholog) NW_004955460 8479274 8525828 + 102009695 AGCD01048517;AGCD01048518;AGCD01048519;AGCD01048520;GBDF01082243;XM_005397777 XP_005397834 MODEL 8728929 ncrna LOC102009823 uncharacterized LOC102009823 NW_004955468 7108012 7122808 + 102009823 AGCD01051995;AGCD01051996;GBDF01128606;XR_001236944;XR_001236945;XR_263399;XR_263400;XR_263401 MODEL 9053774 protein-coding Tcn2 transcobalamin 2 ENCODES a protein that exhibits cargo receptor ligand activity (ortholog); cobalamin binding (ortholog); molecular carrier activity (ortholog); INVOLVED IN cobalamin transport (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenoma (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955455 4827030 4849810 + 102025209 AGCD01045694;AGCD01045695;AGCD01045696;GBDI01002460;XM_005396277 XP_005396334 MODEL 8732003 protein-coding Bpifb3 BPI fold containing family B member 3 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955422 28192359 28208946 - 102003885 AGCD01023345;GBBH01229204;XM_005384853 XP_005384910 MODEL 9057027 protein-coding LOC102012661 solute carrier family 23 member 1-like NW_004955494 7357079 7405398 + 102012661 AGCD01061551;AGCD01061552;GBDI01178715;XM_005405484;XM_005405485;XM_005405486;XM_013504941;XM_013504942;XM_013504943;XM_013504944 XP_005405541;XP_005405542;XP_005405543;XP_013360395;XP_013360396;XP_013360397;XP_013360398 MODEL 8933548 protein-coding Slc25a22 solute carrier family 25 member 22 ENCODES a protein that exhibits amino acid:proton symporter activity (ortholog); L-glutamate transmembrane transporter activity (ortholog); INVOLVED IN L-glutamate transmembrane transport (ortholog); regulation of insulin secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955476 11334508 11338781 + 102010254 AGCD01055451;GBBH01118900;GBDF01154109;XM_013502999 XP_013358453 MODEL 8735602 protein-coding Rab39a RAB39A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); phagosome acidification (ortholog); phagosome-lysosome fusion (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN autolysosome membrane (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955412 10224074 10240270 + 102004366 AGCD01012762;GBDF01262894;XM_013510971 XP_013366425 MODEL 9045935 ncrna LOC102009827 uncharacterized LOC102009827 NW_004955414 26483702 26488503 - 102009827 AGCD01015645;GBCB01079189;XR_260198 MODEL 8920691 protein-coding Tarbp1 tRNA guanosine 2 -O-methyltransferase TARBP1 ENCODES a protein that exhibits tRNA (guanine(18)-2'-O-ribose)-methyltransferase activity (ortholog); INVOLVED IN tRNA methylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955492 5252949 5313008 + 102027313 AGCD01060739;AGCD01060740;GBBH01126216;GBBH01126227;XM_005404955;XM_013504710 XP_005405012;XP_013360164 MODEL 8902708 protein-coding Syde2 synapse defective Rho GTPase homolog 2 INVOLVED IN cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); lung cancer (ortholog) NW_004955423 8783116 8839927 + 102027082 AGCD01023640;AGCD01023641;AGCD01023642;AGCD01023643;AGCD01023644;GBBH01096308;GBCE01034297;XM_013514551 XP_013370005 MODEL 8816567 pseudo LOC102010616 60S ribosomal protein L28 pseudogene NW_004955516 3854520 3859651 - 102010616 AGCD01067515 MODEL 8806182 protein-coding Tysnd1 trypsin like peroxisomal matrix peptidase 1 ENCODES a protein that exhibits identical protein binding (ortholog); protease binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog); proteolysis (ortholog); regulation of fatty acid beta-oxidation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN peroxisome (ortholog) NW_004955437 21094831 21105495 + 102025842 AGCD01034896;AGCD01034897;GBCE01070028;GBDF01127607;XM_013516961 XP_013372415 MODEL 8915953 protein-coding Tom1 target of myb1 membrane trafficking protein ENCODES a protein that exhibits clathrin binding (ortholog); clathrin heavy chain binding (ortholog); myosin VI binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); endosomal transport (ortholog); positive regulation of autophagosome maturation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) NW_004955405 43091632 43115016 + 102007620 AGCD01005599;GBDF01043198;XM_005374661;XM_013519245 XP_005374718;XP_013374699 MODEL 8798755 protein-coding LOC102018018 calcium-binding mitochondrial carrier protein SCaMC-1-like NW_004955435 11949742 12009579 - 102018018 AGCD01033128;AGCD01033129;GBDF01155495;XM_005388828;XM_013516552;XM_013516554;XM_013516555 XP_005388885;XP_013372006;XP_013372008;XP_013372009 MODEL 10079117 pseudo LOC106147350 small ubiquitin-related modifier 2 pseudogene NW_004955546 759456 762895 + 106147350 AGCD01072021 MODEL 8977098 protein-coding Scnn1b sodium channel epithelial 1 subunit beta ENCODES a protein that exhibits ligand-gated sodium channel activity (ortholog); sodium channel activity (ortholog); sodium ion transmembrane transporter activity (ortholog); INVOLVED IN aldosterone metabolic process (ortholog); artery smooth muscle contraction (ortholog); cellular response to acidic pH (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Adrenal Insufficiency (ortholog); asthma (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955493 1937507 1956248 + 102020681 AGCD01060915;GBBH01001430;GBCE01031423;XM_013504885 XP_013360339 MODEL 8734060 pseudo LOC102005317 tubulin alpha-1C chain-like NW_004955569 1268620 1269973 + 102005317 AGCD01074645 MODEL 8950980 pseudo LOC102021423 acid sphingomyelinase-like phosphodiesterase 3a pseudogene NW_004955408 15529175 15530254 - 102021423 AGCD01008420 MODEL 8940553 protein-coding LOC102025342 olfactory receptor 10T2 NW_004955468 10264851 10265798 - 102025342 AGCD01052075;XM_005400149 XP_005400206 MODEL 9004062 protein-coding LOC102018831 olfactory receptor 2T29-like NW_004955418 29690201 29788835 - 102018831 AGCD01019480;AGCD01019481;AGCD01019482;AGCD01019483;GBDJ01253002;XM_005382327;XR_001233550;XR_001233551;XR_001233552;XR_001233553;XR_001233554;XR_260594 XP_005382384 MODEL 8950318 protein-coding LOC102023178 membrane-spanning 4-domains subfamily A member 4A-like NW_004955511 5136245 5165206 - 102023178 AGCD01066549;GBDK01377541;XM_005408090;XM_005408091 XP_005408147;XP_005408148 MODEL 8828160 pseudo LOC102012993 RING1 and YY1-binding protein pseudogene NW_004955432 3966376 3967076 + 102012993 AGCD01030683 MODEL 8891567 ncrna LOC102016099 uncharacterized LOC102016099 NW_004955440 9732822 9743822 - 102016099 AGCD01036384;GBDI01167562;XR_001235269;XR_262012 MODEL 9060098 protein-coding Gucy2f guanylate cyclase 2F, retinal ENCODES a protein that exhibits guanylate cyclase activity (ortholog); identical protein binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cGMP metabolic process (ortholog); detection of light stimulus involved in visual perception (ortholog); response to light stimulus (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN membrane (ortholog); photoreceptor outer segment membrane (ortholog); plasma membrane (ortholog) NW_004955490 6331247 6437563 + 102012207 AGCD01060218;AGCD01060219;AGCD01060220;XM_013504522 XP_013359976 MODEL 39132655 snrna U6 U6 spliceosomal RNA 8787129 protein-coding Smyd2 SET and MYND domain containing 2 ENCODES a protein that exhibits histone H3K36 methyltransferase activity (ortholog); p53 binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN heart development (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; p53 signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Esophageal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955406 3467123 3509156 - 102013144 AGCD01005672;GBDI01176706;XM_005375447 XP_005375504 MODEL 8845878 ncrna LOC102020312 uncharacterized LOC102020312 NW_004955461 9328613 9331182 - 102020312 AGCD01048944;GBDF01159879;XR_263084 MODEL 8842102 protein-coding LOC102003853 myosin-3 ENCODES a protein that exhibits actin filament binding (ortholog); ATP hydrolysis activity (ortholog); microfilament motor activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); skeletal muscle contraction (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Arthrogryposis, Impaired Intellectual Development, and Seizures (ortholog); Breast Cancer, Familial (ortholog); FOUND IN contractile muscle fiber (ortholog); myosin complex (ortholog) NW_004955467 6561609 6583228 + 102003853 AGCD01051416;AGCD01051417;GBDF01285104;XM_005399362 XP_005399419 MODEL 8936752 protein-coding Dnaaf6 dynein axonemal assembly factor 6 ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); INVOLVED IN axonemal dynein complex assembly (ortholog); cilium movement (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH genetic disease (ortholog); nonpapillary renal cell carcinoma (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); trans-Golgi network (ortholog) NW_004955490 8760382 8842392 - 102028643 AGCD01060294;AGCD01060295;AGCD01060296;AGCD01060297;GBDI01026953;XM_005404714 XP_005404771 MODEL 39133671 snrna U4 U4 spliceosomal RNA 8958472 protein-coding Xylt2 xylosyltransferase 2 ENCODES a protein that exhibits magnesium ion binding (ortholog); manganese ion binding (ortholog); protein xylosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); glycosaminoglycan biosynthetic process (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); cataract (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog) NW_004955451 11347254 11354489 - 102011075 AGCD01043349;GBBH01051841;GBDF01249355;XM_013519097;XM_013519098 XP_013374551;XP_013374552 MODEL 8958069 protein-coding Tcof1 treacle ribosome biogenesis factor 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein-macromolecule adaptor activity (ortholog); scaffold protein binding (ortholog); INVOLVED IN neural crest cell development (ortholog); neural crest formation (ortholog); nucleolar large rRNA transcription by RNA polymerase I (ortholog); ASSOCIATED WITH Airway Obstruction (ortholog); autosomal dominant Emery-Dreifuss muscular dystrophy 4 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog) NW_004955415 4138495 4174735 - 102015715 AGCD01015968;GBDK01218885;XM_005380575;XM_013512272;XM_013512273;XM_013512274;XM_013512275;XM_013512276;XM_013512277 XP_005380632;XP_013367726;XP_013367727;XP_013367728;XP_013367729;XP_013367730;XP_013367731 MODEL 9010362 pseudo LOC102010625 coiled-coil domain-containing protein 126 pseudogene NW_004955526 455881 456356 + 102010625 AGCD01069233 MODEL 8835142 ncrna LOC102004598 uncharacterized LOC102004598 NW_004955415 14680227 14691868 - 102004598 AGCD01016306;AGCD01016307;GBDJ01204578;XR_260294 MODEL 8934322 protein-coding Slco4a1 solute carrier organic anion transporter family member 4A1 ENCODES a protein that exhibits prostaglandin transmembrane transporter activity (ortholog); thyroid hormone transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN thyroid hormone metabolic process (ortholog); PARTICIPATES IN multispecific organic anion transporter mediated transport pathway; ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); neuronal ceroid lipofuscinosis (ortholog); FOUND IN cell junction (ortholog) NW_004955528 1436058 1449178 - 102024843 AGCD01069563;GBBH01201288;GBCQ01062658;XM_013507513 XP_013362967 MODEL 8707990 ncrna LOC102018022 uncharacterized LOC102018022 NW_004955533 900860 904030 - 102018022 AGCD01070334;GBDF01261009;XR_264740 MODEL 9040448 protein-coding Tgfbr3l transforming growth factor beta receptor 3 like ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955563 1348698 1353748 - 102014621 AGCD01074142;AGCD01074143;GBDI01034405;XM_013509129 XP_013364583 MODEL 39132797 snrna U6 U6 spliceosomal RNA 8739851 protein-coding Il31 interleukin 31 ENCODES a protein that exhibits cytokine activity (ortholog); cytokine receptor binding (ortholog); oncostatin-M receptor binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955482 6387289 6389361 + 102029864 AGCD01057390;GBDF01063375;XM_005403253 XP_005403310 MODEL 8826828 protein-coding Nrxn3 neurexin 3 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); signaling receptor regulator activity (ortholog); INVOLVED IN adult behavior (ortholog); chemical synaptic transmission (ortholog); learning (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); anxiety disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); presynaptic active zone membrane (ortholog) NW_004955438 2023863 3583671 + 102022230 AGCD01034999;AGCD01035000;AGCD01035001;AGCD01035002;AGCD01035003;AGCD01035004;AGCD01035005;AGCD01035006;AGCD01035007;AGCD01035008;AGCD01035009;AGCD01035010;AGCD01035011;AGCD01035012;AGCD01035013;AGCD01035014;AGCD01035015;AGCD01035016;AGCD01035017;AGCD01035018;AGCD01035019;AGCD01035020;AGCD01035021;AGCD01035022;AGCD01035023;AGCD01035024;GBDK01063802;XM_005390226;XM_005390227;XM_005390228;XM_005390229;XM_013517252;XM_013517253;XM_013517254;XM_013517255;XM_013517256;XM_013517257;XM_013517258;XM_013517259;XM_013517260;XM_013517261;XM_013517262;XM_013517263;XM_013517265;XM_013517266;XM_013517267;XM_013517269;XR_001235159;XR_001235160;XR_001235161 XP_005390283;XP_005390284;XP_005390285;XP_005390286;XP_013372706;XP_013372707;XP_013372708;XP_013372709;XP_013372710;XP_013372711;XP_013372712;XP_013372713;XP_013372714;XP_013372715;XP_013372716;XP_013372717;XP_013372719;XP_013372720;XP_013372721;XP_013372723 MODEL 8972903 protein-coding Ttbk1 tau tubulin kinase 1 ENCODES a protein that exhibits protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN learning or memory (ortholog); negative regulation of gene expression (ortholog); positive regulation of astrocyte activation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Childhood Schizophrenia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule associated complex (ortholog) NW_004955437 9161880 9195098 + 102005176 AGCD01034521;AGCD01034522;GBDF01162981;XM_005389756;XM_005389758;XM_013517133;XM_013517134;XM_013517135;XM_013517136 XP_005389813;XP_005389815;XP_013372587;XP_013372588;XP_013372589;XP_013372590 MODEL 8952536 pseudo LOC102025343 40S ribosomal protein S7 pseudogene NW_004955469 6328707 6329270 + 102025343 AGCD01052380 MODEL 9002193 protein-coding Kif16b kinesin family member 16B ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); early endosome to late endosome transport (ortholog); endoderm development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); early endosome membrane (ortholog) NW_004955415 25449734 25740697 - 102006573 AGCD01016581;AGCD01016582;AGCD01016583;AGCD01016584;AGCD01016585;GBDJ01355401;XM_005380898;XM_013512329;XM_013512330;XM_013512331;XM_013512332 XP_005380955;XP_013367783;XP_013367784;XP_013367785;XP_013367786 MODEL 8743973 protein-coding LOC102003547 C-C motif chemokine 2 NW_004955481 8954125 8956004 + 102003547 AGCD01057090;GBCE01054732;XM_005402837 XP_005402894 MODEL 8905022 pseudo LOC102009420 proteasome assembly chaperone 2 pseudogene NW_004955536 716838 717352 + 102009420 AGCD01070737 MODEL 8816921 ncrna LOC102022139 uncharacterized LOC102022139 NW_004955448 1024522 1030655 - 102022139 AGCD01041248;GBDK01123674;XR_001235762;XR_001235763;XR_262452 MODEL 8855336 protein-coding Dynll1 dynein light chain LC8-type 1 ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN intraciliary retrograde transport (ortholog); mitocytosis (ortholog); motile cilium assembly (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH brain ischemia (ortholog); Breast Cancer, Familial (ortholog); cardiac arrest (ortholog); FOUND IN axon cytoplasm (ortholog); centrosome (ortholog); chromosome (ortholog) NW_004955455 11148041 11150860 - 102010027 AGCD01045984;GBCB01022810;XM_005396503;XM_005396504 XP_005396560;XP_005396561 MODEL 39131531 protein-coding FJX1 four-jointed box kinase 1 9048285 protein-coding Scnn1d sodium channel epithelial 1 subunit delta ENCODES a protein that exhibits sodium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); intracellular sodium ion homeostasis (ortholog); sodium ion import across plasma membrane (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); membrane (ortholog) NW_004955486 9508435 9514107 - 102028865 AGCD01059188;GBDI01243410;XM_005404326 XP_005404383 MODEL 8703555 protein-coding Syf2 SYF2 pre-mRNA splicing factor INVOLVED IN embryonic organ development (ortholog); gastrulation (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); encephalitis (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) NW_004955452 4850049 4856647 - 102005883 AGCD01043996;GBCB01007303;XM_005394818 XP_005394875 MODEL 39133672 snrna U4 U4 spliceosomal RNA 8714818 ncrna LOC102019251 uncharacterized LOC102019251 NW_004955409 23260141 23267863 - 102019251 AGCD01010059;GBBH01137462;XR_259787 MODEL 8707725 pseudo LOC102005318 BRISC complex subunit Abro1 pseudogene NW_004955446 7660056 7661294 - 102005318 AGCD01040126 MODEL 8729233 protein-coding Lasp1 LIM and SH3 protein 1 ENCODES a protein that exhibits actin filament binding (ortholog); monoatomic ion transmembrane transporter activity (ortholog); INVOLVED IN monoatomic ion transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) NW_004955451 13910891 13932506 + 102021409 AGCD01043514;GBCB01043509;GBDF01119073;XM_005394289 XP_005394346 MODEL 39133041 snrna U6 U6 spliceosomal RNA 39132313 snrna U6 U6 spliceosomal RNA 8833652 protein-coding LOC102007940 NKG2D ligand 1-like NW_004955439 11374237 11379696 + 102007940 AGCD01035901;AGCD01035902;AGCD01035903;GBCE01111523;GBDK01115668;XM_013517300 XP_013372754 MODEL 8783366 protein-coding Slc25a23 solute carrier family 25 member 23 ENCODES a protein that exhibits adenine nucleotide transmembrane transporter activity (ortholog); ADP:phosphate antiporter activity (ortholog); ATP:phosphate antiporter activity (ortholog); INVOLVED IN adenine nucleotide transport (ortholog); calcium import into the mitochondrion (ortholog); cellular response to calcium ion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955495 3155024 3171279 + 102004728 AGCD01061828;AGCD01061829;AGCD01061830;AGCD01061831;GBBH01117839;GBDI01080406;XM_013505307 XP_013360761 MODEL 8786660 pseudo LOC102023179 olfactory receptor 1030-like NW_004955511 1688075 1689089 - 102023179 AGCD01066377 MODEL 8789920 pseudo LOC102012995 myb-related protein B pseudogene NW_004955433 16071001 16073415 - 102012995 AGCD01031785 MODEL 39132798 snrna U6 U6 spliceosomal RNA 8969458 protein-coding LOC102014172 olfactory receptor 12-like NW_004955542 1281442 1282674 - 102014172 AGCD01071501;XM_013508127 XP_013363581 MODEL 39132656 snrna U6 U6 spliceosomal RNA 8920730 protein-coding Litaf lipopolysaccharide induced TNF factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of early endosome membrane (ortholog); cytoplasmic side of late endosome membrane (ortholog) NW_004955442 7054418 7084973 + 102027463 AGCD01037613;GBBH01210558;XM_005391161;XM_013517903 XP_005391218;XP_013373357 MODEL 8792637 protein-coding Tarbp2 TARBP2 subunit of RISC loading complex ENCODES a protein that exhibits double-stranded RNA binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN miRNA processing (ortholog); multicellular organism growth (ortholog); negative regulation of cytoplasmic pattern recognition receptor signaling pathway (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); RISC complex (ortholog) NW_004955458 793753 798755 + 102021736 AGCD01047154;GBDF01005633;XM_005397180;XM_005397181;XM_005397182;XM_005397183 XP_005397237;XP_005397238;XP_005397239;XP_005397240 MODEL 8803616 protein-coding Glrx glutaredoxin ENCODES a protein that exhibits glutathione disulfide oxidoreductase activity (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to glucose stimulus (ortholog); negative regulation of hydrogen peroxide-mediated programmed cell death (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) NW_004955418 16747709 16754718 + 102013829 AGCD01019128;GBDJ01126419;XM_005382234;XM_005382235 XP_005382291;XP_005382292 MODEL 8784277 protein-coding Smyd3 SET and MYND domain containing 3 ENCODES a protein that exhibits histone H3K36 dimethyltransferase activity (ortholog); histone H4 methyltransferase activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); establishment of protein localization (ortholog); myotube cell development (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955406 8768365 9417612 - 102010332 AGCD01005807;AGCD01005808;AGCD01005809;AGCD01005810;AGCD01005811;AGCD01005812;AGCD01005813;AGCD01005814;AGCD01005815;AGCD01005816;AGCD01005817;AGCD01005818;AGCD01005819;GBCE01049807;XM_005374789 XP_005374846 MODEL 8768297 protein-coding Tyw2 tRNA wybutosine-synthesizing protein 2 NW_004955540 3121570 3124371 + 102007152 AGCD01071335;GBDJ01260504;XM_005410940 XP_005410997 MODEL 8969128 protein-coding Sapcd1 suppressor APC domain containing 1 NW_004955437 297605 299242 + 102027898 AGCD01034117;GBDI01139374;XM_005389384;XM_013516811;XM_013516812 XP_005389441;XP_013372265;XP_013372266 MODEL 9011313 protein-coding Tom1l1 target of myb1 like 1 membrane trafficking protein ENCODES a protein that exhibits clathrin binding (ortholog); protein kinase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of mitotic nuclear division (ortholog); regulation of DNA biosynthetic process (ortholog); signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endosome (ortholog) NW_004955451 7642679 7690957 - 102019129 AGCD01043243;AGCD01043244;GBDI01175373;GBDI01175374;XM_013519382 XP_013374836 MODEL 9002438 protein-coding Gdf2 growth differentiation factor 2 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); angiogenesis (ortholog); blood vessel morphogenesis (ortholog); ASSOCIATED WITH Bone Fractures (ortholog); hepatocellular carcinoma (ortholog); hereditary hemorrhagic telangiectasia (ortholog); FOUND IN extracellular region (ortholog) NW_004955556 2204841 2210335 + 102013975 AGCD01073208;XM_005412612 XP_005412669 MODEL 8790518 pseudo LOC102010631 ras-related protein Rab-18 pseudogene NW_004955438 11389072 11389615 - 102010631 AGCD01035237 MODEL 8701327 ncrna LOC102018834 uncharacterized LOC102018834 NW_004955485 1420370 1427704 - 102018834 AGCD01058479;GBCE01148220;XR_263904 MODEL 8802628 protein-coding Bpifb4 BPI fold containing family B member 4 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955422 28166892 28190403 - 102004398 AGCD01023344;AGCD01023345;GBBH01019084;XM_013513875;XM_013513876 XP_013369329;XP_013369330 MODEL 8932664 protein-coding Lsm14b LSM family member 14B ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN maternal mRNA clearance (ortholog); meiotic cell cycle process involved in oocyte maturation (ortholog); membraneless organelle assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog) NW_004955528 1889016 1901051 - 102005964 AGCD01069575;AGCD01069576;GBBH01063613;GBCQ01093370;XM_013507506 XP_013362960 MODEL 9022768 protein-coding LOC102009828 olfactory receptor 52N2-like NW_004955414 21765507 21766469 + 102009828 AGCD01015432;XM_005380503 XP_005380560 MODEL 8719560 protein-coding Tgfbrap1 transforming growth factor beta receptor associated protein 1 ENCODES a protein that exhibits SMAD binding (ortholog); transforming growth factor beta receptor binding (ortholog); INVOLVED IN endosomal vesicle fusion (ortholog); endosome to lysosome transport (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN CORVET complex (ortholog); early endosome (ortholog); membrane (ortholog) NW_004955470 10178936 10223234 - 102027290 AGCD01052858;AGCD01052859;GBDI01294775;XM_005400783;XM_005400784;XM_005400785;XM_013522763 XP_005400840;XP_005400841;XP_005400842;XP_013378217 MODEL 8759321 protein-coding Rab39b RAB39B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); myosin V binding (ortholog); INVOLVED IN regulation of autophagy (ortholog); synapse organization (ortholog); vesicle-mediated transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Craniofacial Abnormalities (ortholog); Developmental Disabilities (ortholog); FOUND IN autolysosome membrane (ortholog); cytoplasmic vesicle membrane (ortholog); Golgi apparatus (ortholog) NW_004955594 424642 431009 + 102023416 AGCD01076427;GBBH01210155;XM_005414644 XP_005414701 MODEL 9030359 protein-coding Dnaaf8 dynein axonemal assembly factor 8 ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); dynein axonemal particle (ortholog) NW_004955442 12738888 12752306 - 102006397 AGCD01037745;GBCE01023718;XM_005391277 XP_005391334 MODEL 8732617 pseudo LOC102025344 osteoclast-stimulating factor 1 pseudogene NW_004955414 9310670 9311289 - 102025344 AGCD01015017 MODEL 10085694 ncrna LOC106147351 uncharacterized LOC106147351 NW_004955546 1417500 1426294 - 106147351 AGCD01072059;AGCD01072060;AGCD01072061;AGCD01072062;GBDF01237850;XR_001232207 MODEL 9010311 protein-coding Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cardiac muscle hypertrophy in response to stress (ortholog); cell development (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); FOUND IN chromatin (ortholog); chromatin silencing complex (ortholog); chromosome (ortholog) NW_004955491 4215353 4292229 - 102008543 AGCD01060420;AGCD01060421;AGCD01060422;AGCD01060423;GBDJ01080738;XM_005404737;XM_013504606;XM_013504607;XM_013504608;XM_013504609;XM_013504610 XP_005404794;XP_013360060;XP_013360061;XP_013360062;XP_013360063;XP_013360064 MODEL 39132954 misc_rna Y_RNA Y RNA 9046294 protein-coding LOC102022141 histone H2A type 1-D ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN nucleosome disassembly (ortholog); UV-damage excision repair (ortholog); FOUND IN nucleoplasm (ortholog); nucleosome (ortholog) NW_004955581 93494 100249 + 102022141 AGCD01075657;GBDF01114770;XM_013509722 XP_013365176 MODEL 9010583 ncrna LOC102021425 uncharacterized LOC102021425 NW_004955409 23740604 23772120 - 102021425 AGCD01010072;AGCD01010073;GBDK01264000;XR_259789 MODEL 9044923 protein-coding Dynll2 dynein light chain LC8-type 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); scaffold protein binding (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centrosome (ortholog); cytoplasmic dynein complex (ortholog) NW_004955451 4929186 4936027 - 102003609 AGCD01043149;GBDJ01011660;XM_005394039 XP_005394096 MODEL 9014150 protein-coding Tcp1 t-complex 1 ENCODES a protein that exhibits protein folding chaperone (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of establishment of protein localization to telomere (ortholog); positive regulation of protein localization to Cajal body (ortholog); ASSOCIATED WITH bicuspid aortic valve disease (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cell body (ortholog); centrosome (ortholog) NW_004955439 21114038 21124379 + 102027572 AGCD01036138;AGCD01036139;AGCD01036140;GBCB01002217;GBDF01010602;XM_013517327 XP_013372781 MODEL 8917459 pseudo LOC102012662 protein kinase C iota type pseudogene NW_004955422 13396657 13398480 + 102012662 AGCD01022823 MODEL 8872959 pseudo LOC102016100 T-complex protein 1 subunit eta pseudogene NW_004955440 5237870 5239148 + 102016100 AGCD01036273 MODEL 8929077 protein-coding Sapcd2 suppressor APC domain containing 2 INVOLVED IN establishment of mitotic spindle orientation (ortholog); negative regulation of protein localization to cell cortex (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); developmental and epileptic encephalopathy 14 (ortholog); FOUND IN apical cortex (ortholog); apical junction complex (ortholog); apical plasma membrane (ortholog) NW_004955513 5086379 5090876 - 102030109 AGCD01066954;GBDF01156921;XM_013506719 XP_013362173 MODEL 8818814 protein-coding Scnn1g sodium channel epithelial 1 subunit gamma ENCODES a protein that exhibits ligand-gated sodium channel activity (ortholog); monoatomic ion channel activity (ortholog); sodium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to aldosterone (ortholog); cellular response to nerve growth factor stimulus (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); autism spectrum disorder (ortholog); autosomal recessive pseudohypoaldosteronism type 1 (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955493 1787693 1813085 + 102019924 AGCD01060908;AGCD01060909;GBDF01224981;GBDJ01136157;XM_013504874 XP_013360328 MODEL 8737112 protein-coding Slco4c1 solute carrier organic anion transporter family member 4C1 ENCODES a protein that exhibits transmembrane transporter activity (ortholog); INVOLVED IN transmembrane transport (ortholog); PARTICIPATES IN multispecific organic anion transporter mediated transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog) NW_004955418 11587016 11646242 + 102005593 AGCD01019005;AGCD01019006;GBBH01222086;GBCQ01031398;XM_013513034 XP_013368488 MODEL 8903326 protein-coding LOC102005320 UDP-glucuronosyltransferase 2B17-like NW_004955447 3893198 3953572 + 102005320 AGCD01040684;AGCD01040685;AGCD01040686;AGCD01040687;AGCD01040688;AGCD01040689;AGCD01040690;GBDJ01074833;XM_005392811;XM_013518530 XP_005392868;XP_013373984 MODEL 8968185 ncrna LOC102010634 uncharacterized LOC102010634 NW_004955440 18844372 18859013 - 102010634 AGCD01036623;GBDF01150944;XR_262045 MODEL 8799317 ncrna LOC102020314 uncharacterized LOC102020314 NW_004955463 5307223 5319278 + 102020314 AGCD01049638;GBDF01149770;XR_263152 MODEL 8985278 protein-coding Nsa2 NSA2 ribosome biogenesis factor ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955425 25896849 25903869 - 102003156 AGCD01025939;GBDI01066288;XM_005386065 XP_005386122 MODEL 8854013 protein-coding Ttbk2 tau tubulin kinase 2 ENCODES a protein that exhibits kinesin binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cerebellar granular layer development (ortholog); cerebellar granule cell precursor tangential migration (ortholog); cerebellum development (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); genetic disease (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) NW_004955416 9412297 9518561 - 102026216 AGCD01017087;AGCD01017088;GBBH01036629;GBCE01141570;XM_013512442 XP_013367896 MODEL 8998012 ncrna LOC102012998 uncharacterized LOC102012998 NW_004955435 13458284 13466728 + 102012998 AGCD01033202;AGCD01033203;XR_261687 MODEL 9001346 protein-coding LOC102003548 olfactory receptor 1P1-like NW_004955481 207227 208174 - 102003548 AGCD01056784;XM_005402914 XP_005402971 MODEL 8939356 protein-coding LOC102003857 mediator of RNA polymerase II transcription subunit 6-like NW_004955413 23892506 23893445 - 102003857 AGCD01014339;XM_005379202;XM_013511365 XP_005379259;XP_013366819 MODEL 8800397 protein-coding Guf1 GTP binding elongation factor GUF1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955443 3363151 3384319 - 102005517 AGCD01038191;AGCD01038192;GBCE01084763;GBCQ01065802;XM_005391910 XP_005391967 MODEL 9066207 protein-coding Cxcr3 C-X-C motif chemokine receptor 3 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); C-X-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); cell surface receptor signaling pathway (ortholog); ASSOCIATED WITH allergic disease (ortholog); alopecia areata (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955475 11148928 11152313 - 102010362 AGCD01055143;GBDI01290732;XM_005401676 XP_005401733 MODEL 39131458 protein-coding LITAFD LITAF domain containing 8958388 ncrna LOC102004599 uncharacterized LOC102004599 NW_004955415 30427848 30429710 + 102004599 AGCD01016664;GBDF01085687;XR_260328 MODEL 9045377 protein-coding Glrx2 glutaredoxin 2 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN cellular response to superoxide (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN dendrite (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955406 30497562 30506463 - 102020304 AGCD01006369;AGCD01006370;GBDK01280440;XM_005375105 XP_005375162 MODEL 8754996 pseudo LOC102018025 inositol polyphosphate multikinase pseudogene NW_004955537 2739915 2745001 - 102018025 AGCD01070938 MODEL 8710451 protein-coding Skic2 SKI2 subunit of superkiller complex ENCODES a protein that exhibits 3'-5' RNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN nuclear-transcribed mRNA catabolic process (ortholog); nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay (ortholog); nuclear-transcribed mRNA catabolic process, non-stop decay (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog); Ski complex (ortholog) NW_004955437 473192 482811 + 102005746 AGCD01034137;GBDF01120948;XM_005389400 XP_005389457 MODEL 8878794 protein-coding Syk spleen associated tyrosine kinase ENCODES a protein that exhibits ATP binding (ortholog); immunoglobulin receptor binding (ortholog); integrin binding (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); antiviral innate immune response (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; FasL mediated signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH anti-basement membrane glomerulonephritis (ortholog); arthritis (ortholog); cervical cancer (ortholog); FOUND IN B cell receptor complex (ortholog); cytoplasm (ortholog); early phagosome (ortholog) NW_004955515 1328793 1400206 - 102013532 AGCD01067223;AGCD01067224;AGCD01067225;GBCE01188603;XM_005408868;XM_005408869;XM_005408871;XM_013506884;XM_013506885 XP_005408925;XP_005408926;XP_005408928;XP_013362338;XP_013362339 MODEL 39133042 snrna U6 U6 spliceosomal RNA 8894742 protein-coding Il31ra interleukin 31 receptor A ENCODES a protein that exhibits cytokine binding (ortholog); cytokine receptor activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955446 11857882 11963867 - 102014507 AGCD01040215;AGCD01040216;AGCD01040217;AGCD01040218;AGCD01040219;AGCD01040220;GBDK01269090;XM_005392690;XM_005392691;XM_013518468 XP_005392747;XP_005392748;XP_013373922 MODEL 9036271 protein-coding Gdf3 growth differentiation factor 3 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN endoderm development (ortholog); eye development (ortholog); formation of anatomical boundary (ortholog); ASSOCIATED WITH Camptocormia (ortholog); congenital heart disease (ortholog); Edema (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955413 6493734 6516315 - 102018279 AGCD01013745;AGCD01013746;AGCD01013747;AGCD01013748;GBDF01173445;XM_013511291 XP_013366745 MODEL 39132314 snrna U6 U6 spliceosomal RNA 8755061 protein-coding LOC102023180 pancreatic triacylglycerol lipase NW_004955431 21320026 21336388 + 102023180 AGCD01030495;GBBH01130552;XM_005387851;XM_013515758 XP_005387908;XP_013371212 MODEL 9059415 protein-coding Slc25a24 solute carrier family 25 member 24 ENCODES a protein that exhibits adenine nucleotide transmembrane transporter activity (ortholog); ADP:phosphate antiporter activity (ortholog); ATP transmembrane transporter activity (ortholog); INVOLVED IN adenine nucleotide transport (ortholog); cellular response to calcium ion (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); dementia (ortholog); Dwarfism (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog) NW_004955435 11895475 11933153 - 102017695 AGCD01033126;GBCQ01062812;XM_005388827;XM_013516545 XP_005388884;XP_013371999 MODEL 8707116 protein-coding Bpifb6 BPI fold containing family B member 6 ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog) NW_004955422 28214188 28224604 - 102004396 AGCD01023345;GBDF01181601;XM_005384854 XP_005384911 MODEL 8818011 protein-coding Tgif1 TGFB induced factor homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); co-SMAD binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); determination of left/right symmetry (ortholog); dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); Diabetic Nephropathies (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955402 7130809 7138945 - 102014189 AGCD01000165;AGCD01000166;GBBH01064453;GBDI01173900;XM_005372651 XP_005372708 MODEL 39132657 snrna U6 U6 spliceosomal RNA 8836844 protein-coding LOC102009424 keratin, type II cytoskeletal 5-like NW_004955547 2759440 2771836 - 102009424 AGCD01072294;XM_005411942 XP_005411999 MODEL 8745813 protein-coding LOC102025345 uncharacterized LOC102025345 NW_004955470 4335967 4370486 + 102025345 AGCD01052729;AGCD01052730;GBCB01120642;XM_005400690;XM_005400691;XM_005400692;XM_005400693 XP_005400747;XP_005400748;XP_005400749;XP_005400750 MODEL 39133506 snrna U4 U4 spliceosomal RNA 9060147 protein-coding Tardbp TAR DNA binding protein ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); 3'-UTR-mediated mRNA stabilization (ortholog); amyloid fibril formation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN cytoplasm (ortholog); interchromatin granule (ortholog); mitochondrion (ortholog) NW_004955486 2656121 2674808 - 102013088 AGCD01059002;AGCD01059003;GBDI01005512;XM_005404010;XM_005404011;XM_013504182;XR_001231105;XR_001231106 XP_005404067;XP_005404068;XP_013359636 MODEL 8913707 protein-coding Ezhip EZH inhibitory protein ENCODES a protein that exhibits histone methyltransferase inhibitor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN chromatin organization (ortholog); epigenetic regulation of gene expression (ortholog); oocyte development (ortholog); ASSOCIATED WITH posterior fossa group A ependymoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955543 2532636 2537978 + 102026259 AGCD01071655;AGCD01071656;GBDF01237876;XM_013508142 XP_013363596 MODEL 8701184 protein-coding Tom1l2 target of myb1 like 2 membrane trafficking protein ENCODES a protein that exhibits clathrin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of mitotic nuclear division (ortholog); signal transduction (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog) NW_004955577 93877 153381 + 102013775 AGCD01075379;AGCD01075380;AGCD01075381;GBCB01003076;XM_013509625;XM_013509627;XM_013509628;XM_013509629;XR_001232462 XP_013365079;XP_013365081;XP_013365082;XP_013365083 MODEL 8723078 protein-coding Tyw3 tRNA-yW synthesizing protein 3 homolog ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian cancer (ortholog); stomach cancer (ortholog) NW_004955423 17932008 17952681 - 102027656 AGCD01023865;AGCD01023866;GBCQ01176880;XM_005385234;XM_005385235;XM_013514508 XP_005385291;XP_005385292;XP_013369962 MODEL 9056547 protein-coding Smyd4 SET and MYND domain containing 4 ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955481 1361963 1412669 + 102014451 AGCD01056830;AGCD01056831;AGCD01056832;GBDF01254095;XM_005402603;XM_013503458 XP_005402660;XP_013358912 MODEL 8740372 protein-coding Lat linker for activation of T cells ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); protein kinase binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); gene expression (ortholog); homeostasis of number of cells (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); cholangiocarcinoma (ortholog); FOUND IN cell-cell junction (ortholog); COP9 signalosome (ortholog); immunological synapse (ortholog) NW_004955493 6501504 6506089 - 102011210 AGCD01061118;GBBH01031283;XM_005405151;XM_013504841 XP_005405208;XP_013360295 MODEL 8860695 pseudo LOC102007941 coiled-coil domain-containing protein 152-like NW_004955440 2711927 2712937 + 102007941 AGCD01036218 MODEL 8758420 pseudo LOC102018835 transcription elongation factor B polypeptide 2-like NW_004955487 5499289 5500133 - 102018835 AGCD01059338 MODEL 8890675 protein-coding Sar1a secretion associated Ras related GTPase 1A ENCODES a protein that exhibits amino acid sensor activity (ortholog); G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to leucine starvation (ortholog); COPII vesicle coat assembly (ortholog); COPII-coated vesicle cargo loading (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN COPII vesicle coat (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog) NW_004955437 21075632 21093608 + 102015889 AGCD01034896;GBDF01048679;XM_005390065;XM_005390066;XM_005390067 XP_005390122;XP_005390123;XP_005390124 MODEL 8716390 protein-coding Kif17 kinesin family member 17 ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN anterograde dendritic transport of neurotransmitter receptor complex (ortholog); microtubule-based process (ortholog); protein-containing complex localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955452 1197839 1239209 - 102021077 AGCD01043836;GBDK01380952;XM_005394685;XM_005394686;XM_013519654;XM_013519655;XM_013519656;XM_013519657;XM_013519658;XM_013519659 XP_005394742;XP_005394743;XP_013375108;XP_013375109;XP_013375110;XP_013375111;XP_013375112;XP_013375113 MODEL 8752745 protein-coding Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits protein kinase binding (ortholog); small GTPase binding (ortholog); INVOLVED IN mRNA catabolic process (ortholog); mRNA splicing, via spliceosome (ortholog); spliceosomal tri-snRNP complex assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); Lsm2-8 complex (ortholog) NW_004955437 321367 325556 - 102029115 AGCD01034119;GBDF01050366;XM_005389388 XP_005389445 MODEL 9058391 protein-coding Slco6a1 solute carrier organic anion transporter family member 6A1 INVOLVED IN thyroid hormone transport (ortholog); transmembrane transport (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN CatSper complex (ortholog); sperm principal piece (ortholog) NW_004955418 11451441 11516950 + 102004816 AGCD01019004;GBDF01005273;XM_005382210;XM_005382211 XP_005382267;XP_005382268 MODEL 8800431 protein-coding Il33 interleukin 33 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-33 receptor binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); cellular response to mechanical stimulus (ortholog); defense response to virus (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); allergic asthma (ortholog); Alzheimer's disease (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955434 10145449 10187595 + 102006603 AGCD01032327;GBBH01050842;XM_005388671;XM_005388672;XM_013516393 XP_005388728;XP_005388729;XP_013371847 MODEL 8929664 protein-coding Rab3a RAB3A, member RAS oncogene family ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); G protein activity (ortholog); INVOLVED IN acrosomal vesicle exocytosis (ortholog); axonogenesis (ortholog); calcium-ion regulated exocytosis (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH Ataxia (ortholog); Breast Cancer, Familial (ortholog); cerebellar ataxia (ortholog); FOUND IN acrosomal vesicle (ortholog); axon (ortholog); endosome (ortholog) NW_004955524 3220108 3224376 + 102019948 AGCD01068867;AGCD01068868;GBDF01156150;XM_005409562 XP_005409619 MODEL 8863301 protein-coding LOC102014173 interferon alpha-inducible protein 27, mitochondrial NW_004955438 16133933 16141370 + 102014173 AGCD01035395;GBDK01002841;XM_013517200;XM_013517201;XM_013517202;XM_013517203 XP_013372654;XP_013372655;XP_013372656;XP_013372657 MODEL 8920272 protein-coding Fkbp10 FKBP prolyl isomerase 10 ENCODES a protein that exhibits FK506 binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); INVOLVED IN aorta morphogenesis (ortholog); collagen fibril organization (ortholog); extracellular matrix assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Bruck syndrome (ortholog); Bruck Syndrome 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); membrane (ortholog) NW_004955451 16025008 16031950 + 102006529 AGCD01043648;GBDJ01004397;GBDJ01004405;XM_005394418 XP_005394475 MODEL 8930238 protein-coding Ttc1 tetratricopeptide repeat domain 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); unfolded protein holdase activity (ortholog); INVOLVED IN positive regulation of neuroinflammatory response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytosol (ortholog) NW_004955408 13966957 14007238 + 102022786 AGCD01008379;GBDK01146252;XM_005376252;XM_005376253 XP_005376309;XP_005376310 MODEL 8858899 protein-coding LOC102023181 uncharacterized LOC102023181 NW_004955513 2511446 2531580 + 102023181 AGCD01066880;GBBH01164409;XM_013506574 XP_013362028 MODEL 8812233 pseudo LOC102019253 grpE protein homolog 2, mitochondrial pseudogene NW_004955460 9887916 9888533 - 102019253 AGCD01048560 MODEL 10241616 ncrna LOC106147352 uncharacterized LOC106147352 NW_004955546 1523996 1525744 + 106147352 AGCD01072071;GBDF01023843;XR_001232208 MODEL 8724932 pseudo LOC102021426 E3 ubiquitin-protein ligase RING2 pseudogene NW_004955409 37557200 37558907 - 102021426 AGCD01010529 MODEL 9052302 pseudo LOC102022146 uncharacterized LOC102022146 NW_004955402 16988675 17054385 - 102022146 AGCD01000491;AGCD01000492;AGCD01000493 MODEL 8969387 ncrna LOC102009425 uncharacterized LOC102009425 NW_004955549 824578 919142 - 102009425 AGCD01072431;GBCE01065742;XR_001232253;XR_001232254;XR_001232255;XR_001232256;XR_001232257;XR_264914 MODEL 9060697 protein-coding Lix1 limb and CNS expressed 1 NW_004955418 15509586 15575059 + 102008727 AGCD01019106;AGCD01019107;GBBH01067993;XM_005382220;XM_013513047 XP_005382277;XP_013368501 MODEL 8826631 protein-coding LOC102012663 adenylate kinase isoenzyme 1 NW_004955495 3193444 3209238 - 102012663 AGCD01061835;AGCD01061836;AGCD01061837;GBDF01307680;XM_005405718;XR_001231378;XR_264139;XR_264140;XR_264141 XP_005405775 MODEL 8823434 ncrna LOC102018027 uncharacterized LOC102018027 NW_004955437 7912514 7931491 - 102018027 AGCD01034474;AGCD01034475;GBDI01369509;XR_001235114;XR_001235115;XR_001235116 MODEL 8765215 protein-coding Tcp11 t-complex 11 INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP/PKA signal transduction (ortholog); germ cell development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) NW_004955437 3087733 3113771 - 102022119 AGCD01034296;AGCD01034297;GBCQ01129490;XM_005389542;XM_013516800 XP_005389599;XP_013372254 MODEL 8877335 protein-coding LOC102016102 collagen alpha-1(III) chain-like NW_004955441 9860808 9871968 + 102016102 AGCD01037040;GBDI01367168;XM_013517512 XP_013372966 MODEL 39132800 snrna U6 U6 spliceosomal RNA 8804181 ncrna LOC102009829 uncharacterized LOC102009829 NW_004955415 3199565 3227325 + 102009829 AGCD01015927;GBDF01041582;XR_260260;XR_260261 MODEL 8853421 pseudo LOC102010635 ubiquitin carboxyl-terminal hydrolase 48-like NW_004955441 3586283 3611712 + 102010635 AGCD01036808;AGCD01036809;AGCD01036810;AGCD01036811;AGCD01036812;AGCD01036813 MODEL 39132315 snrna U6 U6 spliceosomal RNA 8748540 protein-coding Dnaaf9 dynein axonemal assembly factor 9 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955415 14148462 14276908 - 102026314 AGCD01016290;AGCD01016291;AGCD01016292;AGCD01016293;AGCD01016294;GBDF01153783;XM_005380792;XM_013512268 XP_005380849;XP_013367722 MODEL 8857905 protein-coding Nsd1 nuclear receptor binding SET domain protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K36 dimethyltransferase activity (ortholog); histone H3K36 methyltransferase activity (ortholog); INVOLVED IN gastrulation with mouth forming second (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955408 29416393 29547444 + 102021209 AGCD01008756;AGCD01008757;AGCD01008758;AGCD01008759;AGCD01008760;AGCD01008761;AGCD01008762;GBCE01136761;XM_013509737;XM_013509739 XP_013365191;XP_013365193 MODEL 39132955 misc_rna Y_RNA Y RNA 8815049 protein-coding Cxcr4 C-X-C motif chemokine receptor 4 ENCODES a protein that exhibits actin binding (ortholog); C-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); ameboidal-type cell migration (ortholog); aorta development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; hypoxia inducible factor pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Bone Metastasis (ortholog); Breast Neoplasms (ortholog); FOUND IN anchoring junction (ortholog); cell leading edge (ortholog); cell surface (ortholog) NW_004955440 3456165 3460024 - 102011479 AGCD01036242;GBBH01062692;XM_005390768 XP_005390825 MODEL 8988138 ncrna LOC102004602 uncharacterized LOC102004602 NW_004955418 11360846 11376911 + 102004602 AGCD01019002;GBDF01041709;XR_260555 MODEL 8795656 protein-coding Guk1 guanylate kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); GMP kinase activity (ortholog); nucleoside monophosphate kinase activity (ortholog); INVOLVED IN dATP metabolic process (ortholog); dGDP biosynthetic process (ortholog); dGMP metabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); photoreceptor inner segment (ortholog) NW_004955581 299010 305032 - 102014843 AGCD01075666;GBBH01132093;GBCQ01002800;XM_005414238 XP_005414295 MODEL 8770092 protein-coding Fkbp11 FKBP prolyl isomerase 11 ASSOCIATED WITH Animal Disease Models (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955500 7744429 7747289 - 102028213 AGCD01063944;GBCB01007590;GBDF01084575;XM_013505646 XP_013361100 MODEL 39133507 snrna U4 U4 spliceosomal RNA 9001706 protein-coding Skic3 SKI3 subunit of superkiller complex INVOLVED IN nuclear-transcribed mRNA catabolic process (ortholog); nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay (ortholog); rescue of stalled cytosolic ribosome (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) NW_004955418 16989400 17068479 + 102016809 AGCD01019140;AGCD01019141;AGCD01019142;AGCD01019143;GBDF01158587;XM_005382246;XM_005382248 XP_005382303;XP_005382305 MODEL 8734471 pseudo LOC102020315 elongation factor 1-beta pseudogene NW_004955410 18673488 18701633 - 102020315 AGCD01011009;AGCD01011010 MODEL 8861449 protein-coding Tyw5 tRNA-yW synthesizing protein 5 ENCODES a protein that exhibits iron ion binding (ortholog); protein homodimerization activity (ortholog); tRNA binding (ortholog); INVOLVED IN wybutosine biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); thymoma (ortholog) NW_004955403 1326027 1351039 + 102008280 AGCD01001717;GBDF01248752;XM_005373255;XM_013511941 XP_005373312;XP_013367395 MODEL 9000005 pseudo LOC102003550 lysine--tRNA ligase-like NW_004955418 23372260 23375258 + 102003550 AGCD01019301 MODEL 8712010 protein-coding LOC102013001 putative spermatogenesis-associated protein 31D3 NW_004955530 1751228 1756912 - 102013001 AGCD01069899;GBDF01052090;XM_013507542;XM_013507543;XM_013507544 XP_013362996;XP_013362997;XP_013362998 MODEL 8786131 protein-coding Sco1 synthesis of cytochrome C oxidase 1 INVOLVED IN copper ion homeostasis (ortholog); cyclooxygenase pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); brain disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); myofibril (ortholog) NW_004955467 6519873 6535321 + 102030058 AGCD01051416;GBBH01167190;XM_005399357 XP_005399414 MODEL 8843827 protein-coding Gdf5 growth differentiation factor 5 ENCODES a protein that exhibits BMP binding (ortholog); identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); chondroblast differentiation (ortholog); ASSOCIATED WITH acromesomelic dysplasia, Grebe type (ortholog); acromesomelic dysplasia, Hunter-Thompson type (ortholog); brachydactyly (ortholog) NW_004955422 25992081 25997122 + 102012449 AGCD01023273;GBBH01147047;XM_005384796 XP_005384853 MODEL 9042876 ncrna LOC102003860 uncharacterized LOC102003860 NW_004955470 10705641 10717884 + 102003860 AGCD01052875;GBCE01089457;XR_263497 MODEL 8933022 protein-coding Bpifc BPI fold containing family C ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955405 41376471 41403410 - 102028820 AGCD01005549;GBCC01004323;GBDI01161130;XM_013519152 XP_013374606 MODEL 8945233 protein-coding Slc25a25 solute carrier family 25 member 25 ENCODES a protein that exhibits ATP:phosphate antiporter activity (ortholog); INVOLVED IN adipose tissue development (ortholog); ATP metabolic process (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955419 621445 656172 - 102018095 AGCD01019598;AGCD01019599;AGCD01019600;AGCD01019601;GBDF01304569;XM_005382383;XM_005382385;XM_005382387 XP_005382440;XP_005382442;XP_005382444 MODEL 8932083 protein-coding Tgif2 TGFB induced factor homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); nodal signaling pathway (ortholog); positive regulation of neuron differentiation (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955422 25024359 25042568 - 102025475 AGCD01023240;GBDK01361422;XM_005384746;XM_005384747;XM_005384748;XM_005384749;XM_005384750;XM_005384751 XP_005384803;XP_005384804;XP_005384805;XP_005384806;XP_005384807;XP_005384808 MODEL 8814145 protein-coding Il34 interleukin 34 ENCODES a protein that exhibits identical protein binding (ortholog); macrophage colony-stimulating factor receptor binding (ortholog); INVOLVED IN interleukin-34-mediated signaling pathway (ortholog); microglial cell proliferation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog); signaling receptor complex (ortholog) NW_004955484 3362240 3429031 + 102005145 AGCD01058176;AGCD01058177;AGCD01058178;AGCD01058179;AGCD01058180;AGCD01058181;GBCE01095073;XM_005403487;XM_005403488;XM_005403492;XM_013503872;XM_013503873 XP_005403544;XP_005403545;XP_005403549;XP_013359326;XP_013359327 MODEL 8980364 protein-coding Rab3b RAB3B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP-dependent protein binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); positive regulation of dopamine uptake involved in synaptic transmission (ortholog); regulation of exocytosis (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); dopaminergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955464 7117908 7177138 + 102023566 AGCD01050053;AGCD01050054;AGCD01050055;GBCQ01044089;XM_005398596;XM_005398597 XP_005398653;XP_005398654 MODEL 8988487 pseudo LOC102019256 R3H and coiled-coil domain-containing protein 1-like NW_004955413 632082 634543 - 102019256 AGCD01013482 MODEL 9051021 protein-coding Ttc12 tetratricopeptide repeat domain 12 INVOLVED IN axonemal dynein complex assembly (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); alcohol dependence (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) NW_004955412 14945237 15011560 + 102007096 AGCD01012863;AGCD01012864;AGCD01012865;GBDF01016223;XM_005378139;XM_005378141;XM_005378142;XM_013511097 XP_005378196;XP_005378198;XP_005378199;XP_013366551 MODEL 39133043 snrna U6 U6 spliceosomal RNA 8921083 protein-coding Tomm20 translocase of outer mitochondrial membrane 20 ENCODES a protein that exhibits mitochondrial signal sequence receptor activity (ortholog); transmembrane protein transporter activity (ortholog); INVOLVED IN protein import into mitochondrial matrix (ortholog); response to 3,3',5-triiodo-L-thyronine (ortholog); response to muscle activity (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; presequence pathway of mitochondrial protein import; ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); Mesothelioma (ortholog); FOUND IN cell periphery (ortholog); migrasome (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog) NW_004955492 4759438 4771060 + 102025369 AGCD01060729;GBDF01010948;XM_005404954 XP_005405011 MODEL 9059248 ncrna LOC102009427 uncharacterized LOC102009427 NW_004955442 18649285 18656714 - 102009427 AGCD01038012;GBDF01055895;XR_262168 MODEL 39131374 protein-coding IL36G interleukin 36 gamma 8744015 ncrna LOC102005321 uncharacterized LOC102005321 NW_004955575 1196092 1210167 + 102005321 AGCD01075234;GBDF01148249;XR_265071 MODEL 9066355 pseudo LOC102018836 60S ribosomal protein L9 pseudogene NW_004955421 9029923 9030616 + 102018836 AGCD01021830 MODEL 9062988 protein-coding Lat2 linker for activation of T cells family member 2 ENCODES a protein that exhibits SH2 domain binding (ortholog); INVOLVED IN B cell activation (ortholog); B cell receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); cervical cancer (ortholog); FOUND IN membrane raft (ortholog); plasma membrane (ortholog) NW_004955456 13674190 13688611 - 102012928 AGCD01046610;GBDK01008866;XM_013520622;XM_013520623;XM_013520624 XP_013376076;XP_013376077;XP_013376078 MODEL 9008981 protein-coding Lix1l limb and CNS expressed 1 like INVOLVED IN actin cytoskeleton organization (ortholog); gene expression (ortholog); mitral valve development (ortholog) NW_004955568 136482 158531 + 102020853 AGCD01074503;AGCD01074504;GBBH01166392;GBDI01181571;XM_013509354 XP_013364808 MODEL 9026568 protein-coding Sympk symplekin scaffold protein INVOLVED IN mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Disease Progression (ortholog); FOUND IN cytoplasm (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog); nuclear body (ortholog) NW_004955574 264312 292616 - 102021815 AGCD01075097;GBDI01137849;XM_005413815;XM_005413816;XM_013509527;XM_013509528 XP_005413872;XP_005413873;XP_013364981;XP_013364982 MODEL 8814297 ncrna LOC102009839 uncharacterized LOC102009839 NW_004955418 27098258 27125846 - 102009839 AGCD01019403;GBDK01371466;XR_001233544;XR_001233545;XR_001233546;XR_260585 MODEL 9007293 protein-coding Sar1b secretion associated Ras related GTPase 1B ENCODES a protein that exhibits amino acid sensor activity (ortholog); G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to leucine starvation (ortholog); COPII vesicle coat assembly (ortholog); COPII-coated vesicle cargo loading (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN COPII vesicle coat (ortholog); cytosol (ortholog); endoplasmic reticulum exit site (ortholog) NW_004955408 5737197 5761228 - 102018896 AGCD01008150;AGCD01008151;GBBH01186879;XM_005376158 XP_005376215 MODEL 8766313 ncrna LOC102010640 uncharacterized LOC102010640 NW_004955556 1708260 1721389 - 102010640 AGCD01073200;GBBH01223895;XR_264978 MODEL 8726235 protein-coding LOC102014181 olfactory receptor 4K14-like NW_004955550 359157 360092 + 102014181 AGCD01072495;XM_005412030 XP_005412087 MODEL 8850500 protein-coding Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits U6 snRNA 3'-end binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); Lsm2-8 complex (ortholog) NW_004955429 16968490 16977517 + 102003790 AGCD01028843;GBCQ01039000;XM_005387060 XP_005387117 MODEL 8947168 protein-coding Kif18a kinesin family member 18A ENCODES a protein that exhibits actin binding (ortholog); microtubule binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); male meiotic nuclear division (ortholog); microtubule depolymerization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); intercellular bridge (ortholog) NW_004955476 7058682 7117496 - 102017657 AGCD01055345;AGCD01055346;GBDF01124958;XM_005401755 XP_005401812 MODEL 9004115 protein-coding LOC102023188 vomeronasal type-2 receptor 116-like NW_004955524 386953 419114 - 102023188 AGCD01068676;AGCD01068677;GBBH01069707;XM_013507330 XP_013362784 MODEL 39132932 misc_rna Y_RNA Y RNA 10324225 ncrna LOC106147353 uncharacterized LOC106147353 NW_004955546 1670315 1674838 + 106147353 AGCD01072075;XR_001232209 MODEL 8857676 protein-coding Dnah1 dynein axonemal heavy chain 1 INVOLVED IN cilium movement involved in cell motility (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); bronchiectasis (ortholog); FOUND IN axoneme (ortholog); inner dynein arm (ortholog); sperm flagellum (ortholog) NW_004955430 2323928 2391470 + 102015430 AGCD01029164;AGCD01029165;GBDF01087600;XM_005387314;XM_013515571 XP_005387371;XP_013371025 MODEL 8816927 protein-coding Dynlrb1 dynein light chain roadblock-type 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN response to light stimulus (ortholog); visual behavior (ortholog); PARTICIPATES IN mitochondria transport pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoplasmic dynein complex (ortholog) NW_004955422 26787879 26807901 - 102022713 AGCD01023303;GBCQ01008485;XM_005384828;XM_005384829;XM_005384830 XP_005384885;XP_005384886;XP_005384887 MODEL 8710039 protein-coding Smyd5 SMYD family member 5 ENCODES a protein that exhibits histone H3K36 trimethyltransferase activity (ortholog); histone H4K20 methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN negative regulation of gene expression, epigenetic (ortholog); positive regulation of cytoplasmic translational elongation (ortholog); regulation of stem cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955424 12408059 12422424 - 102018619 AGCD01024604;GBCQ01129452;XM_005385571;XM_013514725;XM_013514726 XP_005385628;XP_013370179;XP_013370180 MODEL 8892171 protein-coding Ezr ezrin ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ATPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); astral microtubule organization (ortholog); PARTICIPATES IN FasL mediated signaling pathway; parathyroid hormone signaling pathway; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); apical part of cell (ortholog) NW_004955439 3701722 3740345 + 102010409 AGCD01035688;GBCE01002353;XM_013517360 XP_013372814 MODEL 8933373 protein-coding LOC102021429 putative olfactory receptor 10D4 NW_004955412 24688405 24689343 - 102021429 AGCD01013121;XM_013510940 XP_013366394 MODEL 8786433 protein-coding LOC102012664 guanylate-binding protein 5 NW_004955423 5021524 5040124 + 102012664 AGCD01023551;AGCD01023552;AGCD01023553;GBDK01006467;XM_005385100 XP_005385157 MODEL 8855280 protein-coding LOC102007943 keratin, type II cuticular Hb3 NW_004955547 2671303 2677998 - 102007943 AGCD01072294;GBDK01416954;XM_005411938 XP_005411995 MODEL 39132801 snrna U6 U6 spliceosomal RNA 9055831 protein-coding LOC102019258 uncharacterized LOC102019258 NW_004955413 23007320 23038825 - 102019258 AGCD01014323;AGCD01014324;GBDK01319843;XM_013511689;XR_001233057;XR_001233058;XR_001233059;XR_001233060;XR_260095 XP_013367143 MODEL 8790201 protein-coding Tcp11l1 t-complex 11 like 1 ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); lung cancer (ortholog); stomach cancer (ortholog); FOUND IN microtubule (ortholog) NW_004955422 13097785 13161623 - 102024348 AGCD01022810;AGCD01022811;GBDF01017222;XM_013513980;XM_013513981;XM_013513982;XM_013513983;XM_013513984;XR_001233912;XR_001233913 XP_013369434;XP_013369435;XP_013369436;XP_013369437;XP_013369438 MODEL 39132317 snrna U6 U6 spliceosomal RNA 9060122 pseudo LOC102013004 L-lactate dehydrogenase A chain pseudogene NW_004955537 2130074 2131685 + 102013004 AGCD01070918;XR_264773 MODEL 8895042 protein-coding LOC102025347 calcitonin FOUND IN neuronal cell body NW_004955414 30038416 30041811 - 102025347 AGCD01015726;GBDI01013654;XM_005380336;XM_005380337 XP_005380393;XP_005380394 MODEL 8740779 protein-coding Tars1 threonyl-tRNA synthetase 1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); threonine-tRNA ligase activity (ortholog); INVOLVED IN threonyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955426 19086817 19110609 + 102026550 AGCD01026540;GBDF01159910;XM_013514933 XP_013370387 MODEL 8887906 ncrna LOC102003861 uncharacterized LOC102003861 NW_004955472 10850722 10854380 + 102003861 AGCD01053727;GBDF01178480;XR_263568 MODEL 8749893 ncrna LOC102022149 uncharacterized LOC102022149 NW_004955451 4480697 4489701 + 102022149 AGCD01043126;GBDF01048873;XR_001235968;XR_262573;XR_262574 MODEL 8837703 protein-coding Saraf store-operated calcium entry associated regulatory factor INVOLVED IN regulation of store-operated calcium entry (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) NW_004955463 6549495 6567589 - 102023238 AGCD01049684;GBDK01014827;XM_005398364 XP_005398421 MODEL 8974136 protein-coding Slc25a26 solute carrier family 25 member 26 ENCODES a protein that exhibits S-adenosyl-L-methionine transmembrane transporter activity (ortholog); S-adenosyl-L-methionine:S-adenosyl-L-homocysteine antiporter activity (ortholog); INVOLVED IN mitochondrial S-adenosyl-L-methionine transmembrane transport (ortholog); S-adenosyl-L-methionine transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); body dysmorphic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955421 21220071 21334330 - 102016605 AGCD01022106;AGCD01022107;GBCQ01094953;XM_013513718;XM_013513719;XM_013513720;XM_013513721;XM_013513722;XM_013513723 XP_013369172;XP_013369173;XP_013369174;XP_013369175;XP_013369176;XP_013369177 MODEL 8781508 pseudo LOC102016106 RWD domain-containing protein 1 pseudogene NW_004955555 1175559 1176286 - 102016106 AGCD01073060 MODEL 9022945 protein-coding Fkbp14 FKBP prolyl isomerase 14 ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ASSOCIATED WITH congenital muscular dystrophy (ortholog); Ehlers-Danlos syndrome kyphoscoliotic type 2 (ortholog) NW_004955410 31313637 31325544 - 102018479 AGCD01011321;GBCE01159547;XM_005377493 XP_005377550 MODEL 39132658 snrna U6 U6 spliceosomal RNA 8745734 pseudo LOC102020316 protein FAM161A pseudogene NW_004955464 7637976 7641348 - 102020316 AGCD01050065 MODEL 8857593 ncrna LOC102012665 uncharacterized LOC102012665 NW_004955425 2406340 2448278 - 102012665 AGCD01025262;AGCD01025263;GBDF01006731;XR_261120 MODEL 39131926 snrna U1 U1 spliceosomal RNA 9018215 protein-coding Slf1 SMC5/6 complex localization factor 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of double-strand break repair (ortholog); positive regulation of maintenance of mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nuclear inclusion body (ortholog) NW_004955418 17756610 17818552 - 102019915 AGCD01019157;AGCD01019158;GBDK01187313;XM_005382259;XM_005382260;XM_005382261;XM_013512986 XP_005382316;XP_005382317;XP_005382318;XP_013368440 MODEL 39131561 protein-coding SCO2 SCO cytochrome c oxidase assembly protein 2 8814118 pseudo LOC102003551 CD63 antigen pseudogene NW_004955484 4514735 4515444 - 102003551 AGCD01058216 MODEL 8874000 protein-coding Bpnt1 3'(2'), 5'-bisphosphate nucleotidase 1 ENCODES a protein that exhibits 3'(2'),5'-bisphosphate nucleotidase activity (ortholog); inositol-1,4-bisphosphate 1-phosphatase activity (ortholog); magnesium ion binding (ortholog); PARTICIPATES IN sulfite oxidase deficiency pathway; ASSOCIATED WITH cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); familial hypercholesterolemia (ortholog); FOUND IN mitochondrion (ortholog) NW_004955520 3521096 3543255 + 102023516 AGCD01068105;GBDF01128212;XM_005409271;XM_005409272;XM_005409273;XM_005409274;XM_005409275;XR_264596 XP_005409328;XP_005409329;XP_005409330;XP_005409331;XP_005409332 MODEL 8987178 protein-coding Glrx3 glutaredoxin 3 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); identical protein binding (ortholog); iron-sulfur cluster chaperone activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); cell redox homeostasis (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Cardiomegaly (ortholog); cervical cancer (ortholog); FOUND IN dendrite (ortholog); iron-sulfur cluster assembly complex (ortholog); Z disc (ortholog) NW_004955477 7715257 7748913 + 102020563 AGCD01055618;AGCD01055619;GBDF01001098;XM_005402031 XP_005402088 MODEL 9032158 protein-coding Gdf6 growth differentiation factor 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); cell migration (ortholog); ASSOCIATED WITH cleft lip (ortholog); cleft palate (ortholog); fundus dystrophy (ortholog); FOUND IN extracellular region (ortholog) NW_004955417 12152448 12169173 - 102004926 AGCD01018154;GBBH01226389;XM_005381831 XP_005381888 MODEL 8894995 protein-coding Tgif2lx TGFB induced factor homeobox 2 like X-linked ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) NW_004955525 2697167 2697772 + 102022009 AGCD01069103;GBDF01112701;XM_005409737 XP_005409794 MODEL 39133508 snrna U4 U4 spliceosomal RNA 8991966 protein-coding Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits PH domain binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH atherosclerosis (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Lsm2-8 complex (ortholog) NW_004955524 3157607 3165196 + 102022420 AGCD01068861;AGCD01068862;GBDF01050890;XM_005409570;XM_013507313 XP_005409627;XP_013362767 MODEL 8922304 protein-coding LOC102018034 uncharacterized LOC102018034 NW_004955555 1393477 1423035 + 102018034 AGCD01073077;AGCD01073078;AGCD01073079;AGCD01073080;GBDJ01124619;GBDK01349306;XM_013508755;XM_013508756;XM_013508757 XP_013364209;XP_013364210;XP_013364211 MODEL 8731138 protein-coding Kif18b kinesin family member 18B ENCODES a protein that exhibits cytoskeletal motor activity (ortholog); kinesin binding (ortholog); INVOLVED IN microtubule depolymerization (ortholog); mitotic cell cycle (ortholog); regulation of cell division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); COVID-19 (ortholog); FOUND IN astral microtubule (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955451 17707150 17722376 - 102022247 AGCD01043767;AGCD01043768;GBDF01192813;XM_005394558 XP_005394615 MODEL 9003884 protein-coding Rab3c RAB3C, member RAS oncogene family ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); GTPase activity (ortholog); myosin V binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); regulation of exocytosis (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); synaptic vesicle (ortholog); synaptic vesicle membrane (ortholog) NW_004955446 9335298 9577919 - 102009894 AGCD01040159;AGCD01040160;AGCD01040161;GBCQ01023934;XM_005392675;XM_013518391;XM_013518392 XP_005392732;XP_013373845;XP_013373846 MODEL 8828745 protein-coding Gulp1 GULP PTB domain containing engulfment adaptor 1 INVOLVED IN actomyosin contractile ring assembly actin filament organization (ortholog); bone development (ortholog); estrogen metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955403 10079781 10328168 - 102009671 AGCD01001918;AGCD01001919;AGCD01001920;GBCC01008611;XM_005373325;XM_005373327 XP_005373382;XP_005373384 MODEL 8796741 protein-coding Ttc13 tetratricopeptide repeat domain 13 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955492 7683353 7743066 + 102010376 AGCD01060802;GBCE01104916;XM_005404982;XM_005404984 XP_005405039;XP_005405041 MODEL 8768356 protein-coding LOC102009432 olfactory receptor 7G2-like NW_004955563 246588 247514 + 102009432 AGCD01074056;XM_005413197 XP_005413254 MODEL 8921188 protein-coding Dynlrb2 dynein light chain roadblock-type 2 PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic dynein complex (ortholog) NW_004955522 3353087 3364276 + 102027668 AGCD01068381;GBCQ01069321;XM_005409345 XP_005409402 MODEL 9030070 ncrna LOC102018837 uncharacterized LOC102018837 NW_004955421 27841812 27860388 - 102018837 AGCD01022297;GBBH01162065;XR_001233833;XR_001233834 MODEL 8900997 protein-coding Sardh sarcosine dehydrogenase ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); folic acid binding (ortholog); sarcosine dehydrogenase activity (ortholog); INVOLVED IN choline catabolic process (ortholog); glycine biosynthetic process (ortholog); tetrahydrofolate interconversion (ortholog); PARTICIPATES IN choline metabolic pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955513 2933918 2975645 - 102021472 AGCD01066892;GBBH01214329;XM_005408456;XM_013506717 XP_005408513;XP_013362171 MODEL 9042091 protein-coding Il36rn interleukin 36 receptor antagonist INVOLVED IN antifungal humoral response (ortholog); negative regulation of cytokine-mediated signaling pathway (ortholog); negative regulation of interleukin-17 production (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) NW_004955470 1209389 1214730 - 102021960 AGCD01052630;GBCC01027722;XM_005400588;XM_013522678 XP_005400645;XP_013378132 MODEL 8946919 protein-coding LOC102007945 kallikrein-4-like NW_004955558 1622962 1627760 + 102007945 AGCD01073453;GBDF01079521;XM_013508853 XP_013364307 MODEL 8712208 protein-coding Nsd2 nuclear receptor binding SET domain protein 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K36 dimethyltransferase activity (ortholog); histone H3K36 methyltransferase activity (ortholog); INVOLVED IN atrial septum primum morphogenesis (ortholog); atrial septum secundum morphogenesis (ortholog); bone development (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); nucleolus (ortholog) NW_004955514 1084522 1162624 + 102020695 AGCD01067037;GBDF01040595;XM_005408719;XM_005408720 XP_005408776;XP_005408777 MODEL 8767982 protein-coding Tcp11l2 t-complex 11 like 2 ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nuclear speck (ortholog) NW_004955405 40312128 40345224 + 102020522 AGCD01005512;AGCD01005513;AGCD01005514;GBDF01281233;XM_005374617;XM_005374618 XP_005374674;XP_005374675 MODEL 8835349 protein-coding Lats1 large tumor suppressor kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); hippo signaling (ortholog); hormone-mediated signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); microtubule organizing center (ortholog) NW_004955439 11559655 11611287 + 102009881 AGCD01035913;AGCD01035914;AGCD01035915;AGCD01035916;GBDF01220461;XM_005390598;XM_005390599 XP_005390655;XP_005390656 MODEL 8794096 protein-coding Syn1 synapsin I ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN neuron development (ortholog); neurotransmitter secretion (ortholog); regulation of synaptic vesicle cycle (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axon (ortholog); cell body (ortholog); cytoskeleton (ortholog) NW_004955516 460258 521484 + 102014274 AGCD01067385;GBDI01023585;XM_005408937;XM_005408939 XP_005408994;XP_005408996 MODEL 9011618 protein-coding LOC102004603 disintegrin and metalloproteinase domain-containing protein 1a-like NW_004955482 8437339 8442885 + 102004603 AGCD01057520;GBDK01219783;XM_005403177 XP_005403234 MODEL 39132318 snrna U6 U6 spliceosomal RNA 8792603 protein-coding Cxcr5 C-X-C motif chemokine receptor 5 INVOLVED IN leukocyte chemotaxis (ortholog); lymph node development (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH primary biliary cholangitis (ortholog); FOUND IN external side of plasma membrane (ortholog) NW_004955412 20016768 20031635 + 102020318 AGCD01012992;GBBH01107031;XM_005378282 XP_005378339 MODEL 8926760 protein-coding LOC102013015 mastin-like NW_004955442 15945683 15947421 + 102013015 AGCD01037888;GBDF01098386;XM_013517711 XP_013373165 MODEL 8943551 protein-coding LOC102003553 somatomedin-B and thrombospondin type-1 domain-containing protein-like NW_004955420 12198618 12206853 + 102003553 AGCD01020857;GBDF01251527;XM_005383099 XP_005383156 MODEL 39132941 misc_rna Y_RNA Y RNA 8816720 protein-coding LOC102014185 carbonic anhydrase 15-like NW_004955442 18940328 18943376 + 102014185 AGCD01038024;GBCQ01098976;XM_005391793;XM_005391795;XM_005391796;XM_005391797 XP_005391850;XP_005391852;XP_005391853;XP_005391854 MODEL 8896389 protein-coding Skic8 SKI8 subunit of superkiller complex INVOLVED IN negative regulation of myeloid cell differentiation (ortholog); nuclear-transcribed mRNA catabolic process (ortholog); nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 771646 788895 - 102008797 AGCD01042344;GBCE01077094;XM_005393443;XM_005393444 XP_005393500;XP_005393501 MODEL 39133044 snrna U6 U6 spliceosomal RNA 8982275 pseudo LOC102005322 tubulin beta chain-like NW_004955402 252450 252882 - 102005322 AGCD01000015 MODEL 10277295 ncrna LOC106147354 uncharacterized LOC106147354 NW_004955546 3055510 3068741 + 106147354 AGCD01072111;AGCD01072112;AGCD01072113;AGCD01072114;AGCD01072115;AGCD01072116;AGCD01072117;GBDF01153546;XR_001232210 MODEL 8878290 protein-coding LOC102022150 olfactory receptor 19 NW_004955626 1451 5132 - 102022150 AGCD01077461;XM_005415023 XP_005415080 MODEL 8796521 protein-coding Tomm22 translocase of outer mitochondrial membrane 22 ENCODES a protein that exhibits transmembrane protein transporter activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); protein import into mitochondrial matrix (ortholog); protein insertion into mitochondrial membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; presequence pathway of mitochondrial protein import; ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); sarcoma (ortholog); FOUND IN membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrial outer membrane translocase complex (ortholog) NW_004955413 24799735 24801820 + 102022583 AGCD01014379;GBDF01048765;XM_005379268 XP_005379325 MODEL 8970421 ncrna LOC102021430 uncharacterized LOC102021430 NW_004955413 23270738 23276929 + 102021430 AGCD01014329;GBDF01129567;XR_260096 MODEL 39132803 snrna U6 U6 spliceosomal RNA 8825740 protein-coding F10 coagulation factor X ENCODES a protein that exhibits phospholipid binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN positive regulation of TOR signaling (ortholog); proteolysis (ortholog); zymogen activation (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH aplastic anemia (ortholog); blood coagulation disease (ortholog); bone marrow disease (ortholog); FOUND IN serine-type endopeptidase complex (ortholog) NW_004955404 666142 682598 - 102011617 AGCD01003206;AGCD01003207;GBDF01240863;XM_005373972 XP_005374029 MODEL 8896653 protein-coding LOC102019261 taste receptor type 2 member 10-like NW_004955413 6981018 6981974 + 102019261 AGCD01013788;XM_005379615 XP_005379672 MODEL 39132659 snrna U6 U6 spliceosomal RNA 8895400 ncrna LOC102009847 uncharacterized LOC102009847 NW_004955487 8288681 8301499 - 102009847 AGCD01059432;AGCD01059433;GBDF01084799;XR_263988 MODEL 8712673 protein-coding LOC102010643 leukocyte immunoglobulin-like receptor subfamily A member 3 NW_004955567 1316802 1426452 - 102010643 AGCD01074467;AGCD01074468;AGCD01074469;AGCD01074470;AGCD01074471;AGCD01074472;AGCD01074473;AGCD01074474;AGCD01074475;AGCD01074476;XM_013509260 XP_013364714 MODEL 8937125 ncrna LOC102020319 uncharacterized LOC102020319 NW_004955413 9761188 9765424 - 102020319 AGCD01013910;GBCE01033977;XR_260074 MODEL 8880823 pseudo LOC102023190 akirin-1 pseudogene NW_004955531 3639705 3640290 + 102023190 AGCD01070077 MODEL 8937564 protein-coding Dynlt1 dynein light chain Tctex-type 1 ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); GTP-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN axon development (ortholog); cardiac muscle cell apoptotic process (ortholog); dendrite development (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN axonal growth cone (ortholog); cell body (ortholog); cytoplasmic dynein complex (ortholog) NW_004955439 3833525 3842393 + 102011912 AGCD01035690;GBDF01005833;XM_005390519 XP_005390576 MODEL 8981675 protein-coding Tars2 threonyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits aminoacyl-tRNA deacylase activity (ortholog); protein homodimerization activity (ortholog); threonine-tRNA ligase activity (ortholog); ASSOCIATED WITH amenorrhea (ortholog); Ataxia (ortholog); brain disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955413 300142 314703 - 102012519 AGCD01013457;AGCD01013458;GBDF01087784;XM_005378677 XP_005378734 MODEL 9051283 protein-coding Dnah10 dynein axonemal heavy chain 10 ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); FOUND IN sperm principal piece (ortholog) NW_004955482 5206653 5308437 - 102013609 AGCD01057323;AGCD01057324;AGCD01057325;GBDF01089181;XM_013503540;XM_013503541;XM_013503542;XM_013503543 XP_013358994;XP_013358995;XP_013358996;XP_013358997 MODEL 8748158 protein-coding Slc25a27 solute carrier family 25 member 27 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); protein homodimerization activity (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN inner ear development (ortholog); intracellular triglyceride homeostasis (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); schizophrenia (ortholog); FOUND IN apical part of cell (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955437 11497308 11514208 + 102007055 AGCD01034574;GBDF01042740;XM_005389860;XM_005389862 XP_005389917;XP_005389919 MODEL 8783688 ncrna LOC102016108 uncharacterized LOC102016108 NW_004955559 575754 579933 + 102016108 AGCD01073594;GBDF01160759;XR_264996 MODEL 8870504 protein-coding LOC102018035 sialic acid-binding Ig-like lectin 8 NW_004955558 1238069 1248047 - 102018035 AGCD01073424;GBBH01137499;XM_005412701;XM_013508887;XM_013508888;XM_013508889;XM_013508890;XM_013508891;XM_013508892;XM_013508893;XM_013508894;XR_001232331;XR_001232332 XP_005412758;XP_013364341;XP_013364342;XP_013364343;XP_013364344;XP_013364345;XP_013364346;XP_013364347;XP_013364348 MODEL 8802129 pseudo LOC102012667 translationally-controlled tumor protein pseudogene NW_004955502 3634252 3634801 + 102012667 AGCD01064317 MODEL 9053136 pseudo LOC102021433 rRNA 2'-O-methyltransferase fibrillarin pseudogene NW_004955471 1185113 1185892 + 102021433 AGCD01052972 MODEL 8858448 protein-coding Slf2 SMC5/6 complex localization factor 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of double-strand break repair (ortholog); positive regulation of maintenance of mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH Atelis syndrome 1 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955485 9221419 9269308 - 102006135 AGCD01058753;AGCD01058754;GBCB01074847;GBCQ01010494;XM_013504054 XP_013359508 MODEL 8976513 ncrna LOC102025348 uncharacterized LOC102025348 NW_004955471 8707226 8728861 + 102025348 AGCD01053191;AGCD01053192;GBDK01310632;XR_001237062 MODEL 8863321 protein-coding Glrx5 glutaredoxin 5 ENCODES a protein that exhibits iron-sulfur cluster chaperone activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); erythrocyte differentiation (ortholog); protein maturation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH autosomal recessive pyridoxine-refractory sideroblastic anemia 2 (ortholog); autosomal recessive pyridoxine-refractory sideroblastic anemia 3 (ortholog); Childhood-Onset Spasticity with Hyperglycinemia (ortholog); FOUND IN dendrite (ortholog); iron-sulfur cluster assembly complex (ortholog); mitochondrial matrix (ortholog) NW_004955438 17067017 17076162 - 102015982 AGCD01035430;GBBH01092204;XM_005390376 XP_005390433 MODEL 39132660 snrna U6 U6 spliceosomal RNA 8759565 ncrna LOC102003862 uncharacterized LOC102003862 NW_004955474 6739005 6740107 + 102003862 AGCD01054490;GBDF01162687;XR_263599 MODEL 8930409 protein-coding Gdf7 growth differentiation factor 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); axon guidance (ortholog); BMP signaling pathway (ortholog); FOUND IN extracellular region (ortholog) NW_004955469 3134355 3149177 + 102027836 AGCD01052290;AGCD01052291;AGCD01052292;GBDF01101331;XM_013522564 XP_013378018 MODEL 39132319 snrna U6 U6 spliceosomal RNA 8912012 ncrna LOC102013017 uncharacterized LOC102013017 NW_004955444 2369111 2395806 - 102013017 AGCD01038759;AGCD01038760;AGCD01038761;GBDJ01063177;XR_001235512;XR_001235513;XR_001235514 MODEL 8917967 protein-coding Snai1 snail family transcriptional repressor 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); E-box binding (ortholog); kinase binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cartilage morphogenesis (ortholog); cell migration (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955445 8232084 8237893 - 102030677 AGCD01039568;GBCQ01013485;XM_005392323 XP_005392380 MODEL 8771236 protein-coding Lkaaear1 LKAAEAR motif containing 1 NW_004955528 175380 179265 + 102022957 AGCD01069513;GBDF01051163;XM_005409905;XM_013507519;XM_013507520;XM_013507521;XM_013507522 XP_005409962;XP_013362973;XP_013362974;XP_013362975;XP_013362976 MODEL 8705993 ncrna LOC102014188 uncharacterized LOC102014188 NW_004955448 18347215 18360566 + 102014188 AGCD01041746;GBCQ01112525;XR_262479 MODEL 9047271 protein-coding Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits protein heterodimerization activity (ortholog); INVOLVED IN mRNA catabolic process (ortholog); mRNA splicing, via spliceosome (ortholog); response to bacterium (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); Lsm2-8 complex (ortholog); nucleus (ortholog) NW_004955617 42829 47999 - 102006525 AGCD01077267;GBDK01241807;XM_005414987 XP_005415044 MODEL 39133045 snrna U6 U6 spliceosomal RNA 8719444 protein-coding Skida1 SKI/DACH domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog) NW_004955429 7181234 7187309 + 102018422 AGCD01028583;AGCD01028584;GBDJ01303835;XM_013515352 XP_013370806 MODEL 8747759 protein-coding Ttc14 tetratricopeptide repeat domain 14 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955420 9677626 9687008 + 102017666 AGCD01020761;GBCE01001619;XM_005383061 XP_005383118 MODEL 8799746 ncrna LOC102005323 uncharacterized LOC102005323 NW_004955402 4782171 4812521 - 102005323 AGCD01000126;AGCD01000127;GBDI01204334;XR_001236325;XR_259027 MODEL 39131927 snrna U1 U1 spliceosomal RNA 8837974 protein-coding Gusb glucuronidase beta ENCODES a protein that exhibits beta-glucuronidase activity (ortholog); carbohydrate binding (ortholog); hydrolase activity (ortholog); INVOLVED IN aorta development (ortholog); articular cartilage development (ortholog); autophagy (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; congenital sucrase-isomaltase deficiency pathway; erythropoietic porphyria pathway; ASSOCIATED WITH Otitis Media with Effusion; autism spectrum disorder (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); lysosomal lumen (ortholog) NW_004955456 8377161 8392298 - 102004897 AGCD01046473;AGCD01046474;AGCD01046475;GBDJ01424324;XM_005396707;XM_013520594;XM_013520595 XP_005396764;XP_013376048;XP_013376049 MODEL 8964990 protein-coding LOC102022151 olfactory receptor 8B12-like NW_004956494 2419 3366 - 102022151 AGCD01079688;XM_005415202 XP_005415259 MODEL 8948004 protein-coding Kif19 kinesin family member 19 ENCODES a protein that exhibits plus-end-directed microtubule motor activity (ortholog); INVOLVED IN axonemal microtubule depolymerization (ortholog); plus-end specific microtubule depolymerization (ortholog); ASSOCIATED WITH Hydrops Fetalis (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cilium (ortholog) NW_004955553 1219462 1247161 + 102007281 AGCD01072873;GBDF01178770;XM_005412230;XM_013508634;XM_013508635 XP_005412287;XP_013364088;XP_013364089 MODEL 9036048 ncrna LOC102007947 uncharacterized LOC102007947 NW_004955443 8832249 8845558 - 102007947 AGCD01038338;GBDJ01378112;XR_001235447;XR_001235448;XR_262198;XR_262199 MODEL 8964013 protein-coding Il3ra interleukin 3 receptor subunit alpha ENCODES a protein that exhibits interleukin-3 binding (ortholog); interleukin-3 receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-3-mediated signaling pathway (ortholog); monocyte differentiation (ortholog); PARTICIPATES IN interleukin-3 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955499 1004432 1011950 + 102007248 AGCD01063305;GBBH01025894;GBCE01069501;XM_013505601 XP_013361055 MODEL 8989021 protein-coding Sarm1 sterile alpha and TIR motif containing 1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); identical protein binding (ortholog); NAD+ nucleosidase activity (ortholog); INVOLVED IN modification of postsynaptic structure (ortholog); NAD+ catabolic process (ortholog); nervous system process (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955481 4743458 4763766 - 102004279 AGCD01056950;AGCD01056951;GBCE01145647;XM_005402754 XP_005402811 MODEL 10379226 protein-coding Sco2 synthesis of cytochrome C oxidase 2 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN copper ion homeostasis (ortholog); eye development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); cytochrome-c oxidase deficiency disease (ortholog); Human Influenza (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); myofibril (ortholog) NW_004955413 33503882 33505417 - 106146232 AGCD01014673;GBCB01076355;XM_005379585;XM_005379587 XP_005379642;XP_005379644 MODEL 9053040 protein-coding LOC102018844 neutrophil elastase ENCODES a protein that exhibits cytokine binding (ortholog); endopeptidase activity (ortholog); heparin binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); defense response to bacterium (ortholog); defense response to fungus (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); anthrax disease (ortholog); FOUND IN azurophil granule (ortholog); cell surface (ortholog); cytoplasm (ortholog) NW_004955495 6964577 6967208 - 102018844 AGCD01062105;GBDF01239090;XM_005406018 XP_005406075 MODEL 9039022 protein-coding Tcta T cell leukemia translocation altered INVOLVED IN negative regulation of osteoclast differentiation (ortholog); osteoclast fusion (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955532 1347639 1349864 + 102012125 AGCD01070179;GBDF01007499;XM_005410197 XP_005410254 MODEL 8986910 pseudo LOC102009848 transcription elongation factor B polypeptide 1 pseudogene NW_004955489 234222 234732 + 102009848 AGCD01059787 MODEL 8704236 protein-coding LOC102004604 olfactory receptor 1N1-like NW_004955419 5180021 5180950 - 102004604 AGCD01019787;XM_013513100 XP_013368554 MODEL 8952141 ncrna LOC102010644 uncharacterized LOC102010644 NW_004955445 12260606 12264915 + 102010644 AGCD01039746;GBDF01008996;XR_001235639 MODEL 8840050 protein-coding Tgm2 transglutaminase 2 ENCODES a protein that exhibits calcium ion binding (ortholog); GTP binding (ortholog); histone dopaminyltransferase activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); blood vessel remodeling (ortholog); branching involved in salivary gland morphogenesis (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955445 18544192 18576576 + 102014186 AGCD01039906;GBCB01061029;XM_005392542 XP_005392599 MODEL 39133509 snrna U4 U4 spliceosomal RNA 8769497 ncrna LOC102003554 uncharacterized LOC102003554 NW_004955420 23737531 23739070 - 102003554 AGCD01021255;GBBH01155304;XR_001233760;XR_260743 MODEL 8786853 protein-coding Cxcr6 C-X-C motif chemokine receptor 6 ENCODES a protein that exhibits C-X-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); ASSOCIATED WITH systemic scleroderma (ortholog) NW_004955420 26056464 26061992 - 102003029 AGCD01021389;GBDJ01402626;XM_005383457 XP_005383514 MODEL 8950412 protein-coding Fkbp15 FKBP prolyl isomerase family member 15 ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); cytoplasm (ortholog) NW_004955419 14264488 14329890 + 102026641 AGCD01020015;AGCD01020016;GBDF01191885;XM_005382688;XM_005382689 XP_005382745;XP_005382746 MODEL 10381693 protein-coding LOC106147355 zinc finger protein 709-like NW_004955546 540952 542104 - 106147355 AGCD01071997;XM_013508425 XP_013363879 MODEL 8829949 protein-coding Tomm34 translocase of outer mitochondrial membrane 34 ENCODES a protein that exhibits heat shock protein binding (ortholog); INVOLVED IN protein import into mitochondrial matrix (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); Mesothelioma (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955445 12401348 12420548 + 102013770 AGCD01039751;GBBH01164511;XM_005392455 XP_005392512 MODEL 8942557 protein-coding Slc25a28 solute carrier family 25 member 28 ENCODES a protein that exhibits ferrous iron transmembrane transporter activity (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955507 5520915 5530615 - 102005067 AGCD01065678;GBDJ01079892;GBDK01080161;XM_013506230 XP_013361684 MODEL 8973255 protein-coding F11 coagulation factor XI ENCODES a protein that exhibits identical protein binding (ortholog); serine-type aminopeptidase activity (ortholog); INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); plasminogen activation (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH factor XI deficiency (ortholog); genetic disease (ortholog); Hemorrhage (ortholog); FOUND IN extracellular region (ortholog); serine-type endopeptidase complex (ortholog) NW_004955403 22811211 22830281 - 102016869 AGCD01002231;GBDJ01168243;XM_005373429;XM_005373430 XP_005373486;XP_005373487 MODEL 8933502 protein-coding Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 ENCODES a protein that exhibits 3'(2'),5'-bisphosphate nucleotidase activity (ortholog); 3',5'-nucleotide bisphosphate phosphatase activity (ortholog); 3'-nucleotidase activity (ortholog); INVOLVED IN chondrocyte development (ortholog); chondroitin sulfate proteoglycan metabolic process (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chondrodysplasia with joint dislocations gPAPP type (ortholog); esophageal cancer (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network membrane (ortholog) NW_004955454 15899820 15918222 - 102007970 AGCD01045497;AGCD01045498;GBDF01119202;GBDK01128450;XM_013520210;XM_013520211 XP_013375664;XP_013375665 MODEL 8711509 protein-coding Syn2 synapsin II ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); neurotransmitter secretion (ortholog); synaptic vesicle clustering (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog); epilepsy (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955429 14676286 14724625 + 102017687 AGCD01028784;GBDF01094658;XM_013515353 XP_013370807 MODEL 39132943 misc_rna Y_RNA Y RNA 8846730 pseudo LOC102025350 mas-related G-protein coupled receptor member X1-like NW_004955414 33638100 33644821 - 102025350 AGCD01015816;AGCD01015817 MODEL 8903459 protein-coding Lats2 large tumor suppressor kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); hippo signaling (ortholog); hormone-mediated signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); malignant astrocytoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955497 1711882 1768177 - 102010282 AGCD01062469;AGCD01062470;AGCD01062471;AGCD01062472;GBCE01135541;GBCE01135542;XM_013505466 XP_013360920 MODEL 8772683 protein-coding Gdf9 growth differentiation factor 9 INVOLVED IN blastocyst development (ortholog); embryonic cleavage (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); hereditary breast ovarian cancer syndrome (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog) NW_004955408 4234208 4239795 - 102016569 AGCD01008098;AGCD01008099;GBCB01038530;GBDF01127692;XM_013508374;XM_013508382 XP_013363828;XP_013363836 MODEL 8830520 protein-coding LOC102004605 histone H2A type 1 NW_004955483 970650 971254 - 102004605 AGCD01057638;GBDF01049962;XM_013503794 XP_013359248 MODEL 8733570 pseudo LOC102009854 cytochrome c oxidase assembly factor 5 pseudogene NW_004955424 27866525 27870117 - 102009854 AGCD01025137 MODEL 8717200 protein-coding LOC102009434 zinc finger protein 709-like NW_004955569 187430 209724 + 102009434 AGCD01074566;GBDF01011185;XM_013509367 XP_013364821 MODEL 8830336 protein-coding Gls glutaminase ENCODES a protein that exhibits glutaminase activity (ortholog); identical protein binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); intracellular glutamate homeostasis (ortholog); L-glutamate biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); CASGID syndrome (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955403 8195241 8261402 - 102028486 AGCD01001869;AGCD01001870;AGCD01001871;AGCD01001872;AGCD01001873;GBDJ01423953;XM_005373298;XM_013512252 XP_005373355;XP_013367706 MODEL 8745076 protein-coding Rab3d RAB3D, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTP-dependent protein binding (ortholog); myosin V binding (ortholog); INVOLVED IN bone resorption (ortholog); positive regulation of regulated secretory pathway (ortholog); regulation of exocytosis (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasmic microtubule (ortholog); secretory vesicle (ortholog); zymogen granule (ortholog) NW_004955495 2254336 2259211 - 102018939 AGCD01061759;AGCD01061760;GBBH01063907;XM_005405649;XM_013505109 XP_005405706;XP_013360563 MODEL 8741107 protein-coding LOC102019266 translation initiation factor IF-2-like NW_004955414 19651075 19652661 + 102019266 AGCD01015327;GBCB01111580;GBDK01347780;XM_013511755 XP_013367209 MODEL 8960023 ncrna LOC102016110 uncharacterized LOC102016110 NW_004955443 16354739 16374514 - 102016110 AGCD01038567;GBDF01236537;XR_262210 MODEL 8767373 protein-coding Nsd3 nuclear receptor binding SET domain protein 3 ENCODES a protein that exhibits histone H3K27 dimethyltransferase activity (ortholog); histone H3K27 methyltransferase activity (ortholog); histone H3K27 trimethyltransferase activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955463 13864294 13985995 - 102022371 AGCD01049892;AGCD01049893;AGCD01049894;AGCD01049895;AGCD01049896;GBCE01186815;GBDI01131067;XM_005398440 XP_005398497 MODEL 39133046 snrna U6 U6 spliceosomal RNA 9005393 protein-coding LOC102005326 zinc finger protein 271-like NW_004955402 22009497 22049009 + 102005326 AGCD01000595;AGCD01000596;AGCD01000597;AGCD01000598;GBDJ01165251;XM_005372797;XM_005372798;XM_005372799;XM_013509230;XM_013509319;XM_013509375;XM_013509440 XP_005372854;XP_005372855;XP_005372856;XP_013364684;XP_013364773;XP_013364829;XP_013364894 MODEL 8858850 protein-coding LOC102022152 keratin-associated protein 9-3-like NW_004955451 15443373 15444392 - 102022152 AGCD01043607;XM_005394381 XP_005394438 MODEL 8704123 ncrna LOC102023192 uncharacterized LOC102023192 NW_004955437 3136338 3136884 - 102023192 AGCD01034298;GBDF01194081;XR_001235054 MODEL 39131370 protein-coding SLF2 SMC5/6 complex localization factor 2 8778547 protein-coding LOC102020322 Fc receptor-like protein 2 NW_004955468 9737059 9749159 + 102020322 AGCD01052057;GBBH01066864;XM_013522273 XP_013377727 MODEL 8806691 protein-coding Kif1a kinesin family member 1A ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); plus-end-directed microtubule motor activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde dendritic transport (ortholog); anterograde neuronal dense core vesicle transport (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); amblyopia (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955542 756834 832805 + 102014171 AGCD01071480;AGCD01071481;GBCB01099302;XM_005411149;XM_005411150;XM_005411151;XM_005411152;XM_013508118;XM_013508119;XM_013508120;XM_013508121;XM_013508122;XM_013508124;XM_013508125 XP_005411206;XP_005411207;XP_005411208;XP_005411209;XP_013363572;XP_013363573;XP_013363574;XP_013363575;XP_013363576;XP_013363578;XP_013363579 MODEL 8765042 protein-coding Scoc short coiled-coil protein INVOLVED IN positive regulation of macroautophagy (ortholog); regulation of protein complex stability (ortholog); ASSOCIATED WITH high grade glioma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) NW_004955428 3404372 3435653 - 102014926 AGCD01027657;GBDF01082674;XM_005386676;XM_005386677 XP_005386733;XP_005386734 MODEL 8954227 protein-coding LOC102003863 protocadherin beta-7 NW_004955415 12610873 12620570 - 102003863 AGCD01016207;AGCD01016208;XM_013512126 XP_013367580 MODEL 39132804 snrna U6 U6 spliceosomal RNA 8818837 protein-coding Tars3 threonyl-tRNA synthetase 3 ENCODES a protein that exhibits threonine-tRNA ligase activity (ortholog); INVOLVED IN threonyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955416 28509229 28554050 - 102020007 AGCD01017630;AGCD01017631;AGCD01017632;GBCE01179632;GBDK01432440;XM_013512618 XP_013368072 MODEL 8852424 protein-coding Dnah11 dynein axonemal heavy chain 11 INVOLVED IN cardiac septum morphogenesis (ortholog); cilium movement (ortholog); determination of left/right asymmetry in nervous system (ortholog); ASSOCIATED WITH acne (ortholog); acute myeloid leukemia (ortholog); allergic rhinitis (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axoneme (ortholog) NW_004955410 24045333 24352626 + 102006882 AGCD01011122;AGCD01011123;AGCD01011124;AGCD01011125;AGCD01011126;GBBH01091428;GBBH01091430;XM_005377377;XM_005377378 XP_005377434;XP_005377435 MODEL 8769096 protein-coding Cxxc1 CXXC finger protein 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); histone H3K4me3 reader activity (ortholog); unmethylated CpG binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN DNA modification pathway; histone modification pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN histone methyltransferase complex (ortholog); nuclear matrix (ortholog); nuclear speck (ortholog) NW_004955402 35335520 35340891 - 102017933 AGCD01000878;GBBH01090896;XM_005372924;XM_005372925;XM_013510694;XM_013510699 XP_005372981;XP_005372982;XP_013366148;XP_013366153 MODEL 8897463 protein-coding Llgl1 LLGL scribble cell polarity complex component 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein kinase binding (ortholog); small GTPase binding (ortholog); INVOLVED IN axonogenesis (ortholog); cortical actin cytoskeleton organization (ortholog); Golgi to plasma membrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); basolateral plasma membrane (ortholog); cortical actin cytoskeleton (ortholog) NW_004955478 11075399 11089818 - 102021006 AGCD01056158;AGCD01056159;GBBH01126920;GBDJ01224920;XM_005402281 XP_005402338 MODEL 8965466 ncrna LOC102018040 uncharacterized LOC102018040 NW_004955577 358724 365029 - 102018040 AGCD01075392;GBDF01178865;XR_001232463;XR_265079 MODEL 8965566 protein-coding Dynlt2 dynein light chain Tctex-type 2 INVOLVED IN microtubule-based movement (ortholog); FOUND IN cytoplasmic dynein complex (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955411 3866312 3903862 + 102020225 AGCD01011556;AGCD01011557;AGCD01011558;AGCD01011559;AGCD01011560;AGCD01011561;GBDF01080138;XM_005377635 XP_005377692 MODEL 8940730 protein-coding Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits protein heterodimerization activity (ortholog); INVOLVED IN mRNA catabolic process (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); Lsm2-8 complex (ortholog); nucleus (ortholog) NW_004955428 1931684 1944445 + 102010075 AGCD01027626;GBDI01078048;XM_005386661;XM_005386662 XP_005386718;XP_005386719 MODEL 10083140 ncrna LOC106147356 uncharacterized LOC106147356 NW_004955546 2688560 2692151 + 106147356 AGCD01072099;XR_001232211 MODEL 39131928 snrna U1 U1 spliceosomal RNA 8946993 pseudo LOC102012669 protein slowmo homolog 2-like NW_004955503 6860185 6860772 + 102012669 AGCD01064772 MODEL 8843346 protein-coding Gvqw3 GVQW motif containing 3 NW_004955414 15484559 15538991 - 102019590 AGCD01015186;GBDF01249108;XM_013511872;XM_013511873;XM_013511874;XM_013511875;XM_013511876;XM_013511877;XM_013511878;XM_013511879;XM_013511880 XP_013367326;XP_013367327;XP_013367328;XP_013367329;XP_013367330;XP_013367331;XP_013367332;XP_013367333;XP_013367334 MODEL 8873963 pseudo LOC102021434 elongation factor 1-alpha 1 pseudogene NW_004955414 28395548 28396556 - 102021434 AGCD01015681;XR_260242 MODEL 8775840 protein-coding Il4 interleukin 4 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN B cell costimulation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to mercury ion (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; interleukin-12 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Acute Hepatitis (ortholog); Acute Lung Injury (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); interleukin-4 receptor complex (ortholog) NW_004955408 4058052 4065999 + 102015609 AGCD01008086;XM_013507371 XP_013362825 MODEL 8750271 protein-coding LOC102007948 leukocyte immunoglobulin-like receptor subfamily B member 3 NW_004955567 1160961 1183994 + 102007948 AGCD01074460;AGCD01074461;GBCE01168958;XM_005413368;XM_013509271;XM_013509272;XM_013509273;XM_013509274;XM_013509275;XM_013509276;XM_013509277;XM_013509278 XP_005413425;XP_013364725;XP_013364726;XP_013364727;XP_013364728;XP_013364729;XP_013364730;XP_013364731;XP_013364732 MODEL 8711636 protein-coding Tcte1 t-complex-associated-testis-expressed 1 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955437 9900295 9913955 - 102021594 AGCD01034549;GBDF01120599;XM_005389817 XP_005389874 MODEL 8977426 pseudo LOC102005328 peroxiredoxin-1 pseudogene NW_004955402 31453916 31455006 + 102005328 AGCD01000789 MODEL 8917790 protein-coding Bptf bromodomain PHD finger transcription factor ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); brain development (ortholog); cellular response to nerve growth factor stimulus (ortholog); PARTICIPATES IN histone modification pathway; ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); Alzheimer's disease (ortholog); FOUND IN ATPase complex (ortholog); cell body (ortholog); chromatin (ortholog) NW_004955478 6990816 7088751 + 102026861 AGCD01055938;AGCD01055939;AGCD01055940;AGCD01055941;GBBH01089810;GBCQ01152099;XM_013503185;XM_013503186;XM_013503187;XM_013503188;XM_013503189;XM_013503190;XM_013503191;XM_013503192;XM_013503193;XM_013503194;XM_013503195 XP_013358639;XP_013358640;XP_013358641;XP_013358642;XP_013358643;XP_013358644;XP_013358645;XP_013358646;XP_013358647;XP_013358648;XP_013358649 MODEL 8709348 protein-coding LOC102014190 E3 ubiquitin-protein ligase TRIM39 NW_004955583 454579 466005 + 102014190 AGCD01075825;GBBH01186352;GBCE01008619;XM_005414304;XM_013509782;XM_013509783 XP_005414361;XP_013365236;XP_013365237 MODEL 8805796 protein-coding LOC102013019 nuclear factor interleukin-3-regulated protein NW_004955563 825025 844211 - 102013019 AGCD01074090;AGCD01074091;XM_005413205 XP_005413262 MODEL 39133510 snrna U4 U4 spliceosomal RNA 8930116 protein-coding Tgm3 transglutaminase 3 ENCODES a protein that exhibits calcium ion binding (ortholog); catalytic activity (ortholog); protein-glutamine gamma-glutamyltransferase activity (ortholog); INVOLVED IN keratinocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extrinsic component of cytoplasmic side of plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955415 13391857 13435342 + 102014351 AGCD01016247;AGCD01016248;AGCD01016249;GBDI01257144;XM_005380750 XP_005380807 MODEL 9032823 ncrna LOC102003556 uncharacterized LOC102003556 NW_004955420 28596394 28604005 + 102003556 AGCD01021480;AGCD01021481;GBBH01098605;XR_001233725;XR_001233726;XR_001233727;XR_001233728;XR_001233729;XR_001233730;XR_260767;XR_260768 MODEL 8989694 protein-coding Snai2 snail family transcriptional repressor 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cartilage morphogenesis (ortholog); cell migration (ortholog); cell migration involved in endocardial cushion formation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); calcinosis (ortholog); Esophageal Neoplasms (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955454 8759860 8763603 - 102025653 AGCD01045326;GBDJ01234105;XM_005396046 XP_005396103 MODEL 8962602 protein-coding LOC102009437 uncharacterized LOC102009437 NW_004955447 15549581 15578315 + 102009437 AGCD01041059;AGCD01041060;GBBH01122934;XM_013518483 XP_013373937 MODEL 8879203 protein-coding Ttc16 tetratricopeptide repeat domain 16 ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955419 926561 940368 - 102028539 AGCD01019623;AGCD01019624;GBCE01008925;XM_005382418;XM_013513206;XM_013513208;XM_013513209;XM_013513210;XM_013513211;XM_013513212 XP_005382475;XP_013368660;XP_013368662;XP_013368663;XP_013368664;XP_013368665;XP_013368666 MODEL 8920470 protein-coding Fkbp1a FKBP prolyl isomerase 1A ENCODES a protein that exhibits activin receptor binding (ortholog); calcium channel regulator activity (ortholog); enzyme binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); cytokine-mediated signaling pathway (ortholog); heart morphogenesis (ortholog); PARTICIPATES IN activin signaling pathway; mTOR signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Barth syndrome (ortholog); congenital heart disease (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955596 580106 606210 - 102014630 AGCD01076523;AGCD01076524;GBCB01000555;XM_005414705;XM_005414706;XM_013510019;XM_013510020 XP_005414762;XP_005414763;XP_013365473;XP_013365474 MODEL 8952419 protein-coding Skil SKI like proto-oncogene ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN blastocyst formation (ortholog); lens fiber cell differentiation (ortholog); lymphocyte homeostasis (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955420 530531 554308 + 102020343 AGCD01020545;GBDI01355390;GBDJ01349393;XM_005382979 XP_005383036 MODEL 8764079 protein-coding Tomm40 translocase of outer mitochondrial membrane 40 ENCODES a protein that exhibits monoatomic cation channel activity (ortholog); preprotein binding (ortholog); transmembrane protein transporter activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); protein import into mitochondrial matrix (ortholog); protein insertion into mitochondrial membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; intermembrane space assembly pathway of mitochondrial protein import; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Animal Disease Models (ortholog); FOUND IN membrane (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog); mitochondrial inner membrane (ortholog) NW_004955555 1987063 1997329 + 102028023 AGCD01073118;AGCD01073119;AGCD01073120;GBBH01087837;GBCE01039145;XM_013508699 XP_013364153 MODEL 8780160 protein-coding Slc25a29 solute carrier family 25 member 29 ENCODES a protein that exhibits arginine:ornithine antiporter activity (ortholog); basic amino acid transmembrane transporter activity (ortholog); high-affinity L-arginine transmembrane transporter activity (ortholog); INVOLVED IN carnitine transport (ortholog); L-arginine transmembrane transport (ortholog); L-histidine transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955438 21383805 21393897 - 102018028 AGCD01035539;AGCD01035540;AGCD01035541;GBDF01015561;GBDI01129385;XM_013517271 XP_013372725 MODEL 39132661 snrna U6 U6 spliceosomal RNA 8885025 protein-coding Sarnp SAP domain containing ribonucleoprotein ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); transcription export complex (ortholog) NW_004955458 3396443 3451193 - 102021210 AGCD01047301;AGCD01047302;GBDJ01421628;XM_005397259;XR_262968 XP_005397316 MODEL 8993621 ncrna LOC102018845 uncharacterized LOC102018845 NW_004955499 7438345 7462684 - 102018845 AGCD01063587;GBCE01090104;XR_001231453;XR_264222 MODEL 9063399 protein-coding F11r F11 receptor ENCODES a protein that exhibits integrin binding (ortholog); PDZ domain binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actomyosin structure organization (ortholog); cell adhesion (ortholog); cell differentiation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atherosclerosis (ortholog); breast cancer (ortholog); FOUND IN bicellular tight junction (ortholog); cell junction (ortholog); cell-cell junction (ortholog) NW_004955468 12764968 12785956 - 102023683 AGCD01052186;AGCD01052187;GBBH01000819;XM_005400228;XM_013522519 XP_005400285;XP_013377973 MODEL 39132320 snrna U6 U6 spliceosomal RNA 8810455 protein-coding LOC102010649 zinc finger protein 134 NW_004955584 442199 447345 + 102010649 AGCD01075941;GBDF01124692;XM_005414366;XM_013509874;XM_013509875 XP_005414423;XP_013365328;XP_013365329 MODEL 9017428 protein-coding Syn3 synapsin III ENCODES a protein that exhibits ATP binding (ortholog); INVOLVED IN synaptic vesicle clustering (ortholog); synaptic vesicle cycle (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) NW_004955405 41450081 41762894 - 102030270 AGCD01005552;AGCD01005553;AGCD01005554;AGCD01005555;AGCD01005556;AGCD01005557;AGCD01005558;GBBH01184382;XM_005374650;XM_005374651;XM_013519163 XP_005374707;XP_005374708;XP_013374617 MODEL 8822550 ncrna LOC102009857 uncharacterized LOC102009857 NW_004955425 20777011 20788476 - 102009857 AGCD01025762;AGCD01025763;GBDJ01354331;XR_261165;XR_261166 MODEL 8931181 protein-coding Lax1 lymphocyte transmembrane adaptor 1 ENCODES a protein that exhibits protein kinase binding (ortholog); SH2 domain binding (ortholog); INVOLVED IN antigen receptor-mediated signaling pathway (ortholog); B cell activation (ortholog); immune response (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); membrane (ortholog) NW_004955406 39656549 39667448 + 102013795 AGCD01006632;GBDI01290363;XM_005375271;XM_005375272;XM_005375273;XM_005375274;XM_005375275;XM_013522643 XP_005375328;XP_005375329;XP_005375330;XP_005375331;XP_005375332;XP_013378097 MODEL 8711849 protein-coding LOC102003870 eotaxin ENCODES a protein that exhibits CCR3 chemokine receptor binding (ortholog); chemokine activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN actin filament organization (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); branching involved in mammary gland duct morphogenesis (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); allergic conjunctivitis (ortholog); allergic disease (ortholog); FOUND IN extracellular region (ortholog) NW_004955481 9017930 9020436 + 102003870 AGCD01057092;GBDF01030595;XM_005402838 XP_005402895 MODEL 9064388 protein-coding Gls2 glutaminase 2 ENCODES a protein that exhibits glutaminase activity (ortholog); INVOLVED IN reactive oxygen species metabolic process (ortholog); regulation of apoptotic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) NW_004955458 4055088 4065307 - 102010342 AGCD01047364;GBCQ01165367;GBDK01180497;XM_005397316 XP_005397373 MODEL 8948395 protein-coding LOC102019268 cytoskeleton-associated protein 2-like NW_004955475 12067113 12069248 - 102019268 AGCD01055178;GBDI01308945;XM_013502802 XP_013358256 MODEL 8739454 protein-coding Cxxc4 CXXC finger protein 4 ENCODES a protein that exhibits methyl-CpG binding (ortholog); PDZ domain binding (ortholog); zinc ion binding (ortholog); INVOLVED IN negative regulation of Wnt signaling pathway (ortholog); Wnt signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); nucleus (ortholog) NW_004955496 4523027 4546671 + 102011334 AGCD01062325;AGCD01062326;GBDF01114472;XM_013505373 XP_013360827 MODEL 8961049 protein-coding Snai3 snail family transcriptional repressor 3 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH perinatal necrotizing enterocolitis (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955541 2593530 2599105 - 102004972 AGCD01071418;GBCB01024899;XM_005411019 XP_005411076 MODEL 8814478 ncrna LOC102016112 uncharacterized LOC102016112 NW_004955445 5830503 5848709 + 102016112 AGCD01039475;GBDJ01405649;XR_001235600 MODEL 8708722 protein-coding LOC102022153 uncharacterized LOC102022153 NW_004955403 379285 396291 - 102022153 AGCD01001691;GBDI01039089;XM_013511757 XP_013367211 MODEL 8816288 protein-coding Llgl2 LLGL scribble cell polarity complex component 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN branching involved in labyrinthine layer morphogenesis (ortholog); establishment or maintenance of polarity of embryonic epithelium (ortholog); L-leucine transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955553 2377640 2415152 + 102030244 AGCD01072935;GBDJ01082430;XM_005412308;XM_013508660;XM_013508661;XM_013508662 XP_005412365;XP_013364114;XP_013364115;XP_013364116 MODEL 8933579 protein-coding Nsdhl NAD(P) dependent steroid dehydrogenase-like ENCODES a protein that exhibits 3-beta-hydroxysteroid dehydrogenase (NAD+)/C4-decarboxylase activity (ortholog); 3-beta-hydroxysteroid dehydrogenase [NAD(P)+]/C4-decarboxylase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol metabolic process (ortholog); hair follicle development (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH Arachnodactyly (ortholog); Bloch-Sulzberger syndrome (ortholog); CHILD syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955498 8135897 8161775 + 102011559 AGCD01063167;AGCD01063168;GBBH01050653;XM_005406453;XM_005406454 XP_005406510;XP_005406511 MODEL 8962718 protein-coding Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH esophageal cancer (ortholog); generalized dystonia (ortholog); Joubert Syndrome 36 (ortholog); FOUND IN cytoplasm (ortholog); Lsm2-8 complex (ortholog); nucleus (ortholog) NW_004955495 5829976 5836785 + 102014375 AGCD01062035;GBCQ01002760;XM_005405905 XP_005405962 MODEL 39132945 misc_rna Y_RNA Y RNA 9064073 pseudo LOC102023193 phosducin-like protein 3 pseudogene NW_004955534 780697 781415 - 102023193 AGCD01070470 MODEL 9029641 ncrna LOC102025352 uncharacterized LOC102025352 NW_004955415 29717377 29729552 + 102025352 AGCD01016654;GBBH01180208;XR_260323 MODEL 8990248 pseudo LOC102020323 homeobox protein PKNOX1 pseudogene NW_004955468 3756234 3757363 + 102020323 AGCD01051868 MODEL 8889158 protein-coding Gxylt1 glucoside xylosyltransferase 1 ENCODES a protein that exhibits UDP-D-xylose:beta-D-glucoside alpha-1,3-D-xylosyltransferase activity (ortholog); UDP-xylosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via glucose (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog) NW_004955500 1479159 1511385 - 102021026 AGCD01063656;GBBH01049157;XM_013505719;XM_013505720 XP_013361173;XP_013361174 MODEL 8881807 pseudo LOC102004607 phosphatidylserine synthase 1 pseudogene NW_004955419 18515166 18516459 - 102004607 AGCD01020175 MODEL 8878857 protein-coding Slfn11 schlafen family member 11 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); RNA endonuclease activity (ortholog); tRNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); defense response to virus (ortholog); DNA damage response (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955481 9885798 9900330 - 102014452 AGCD01057123;AGCD01057124;GBBH01028655;GBDI01086604;XM_013503414 XP_013358868 MODEL 39132322 snrna U6 U6 spliceosomal RNA 39132806 snrna U6 U6 spliceosomal RNA 8707149 ncrna LOC102005329 uncharacterized LOC102005329 NW_004955602 418672 420204 - 102005329 AGCD01076784;GBDF01158942;XR_265157 MODEL 39133511 snrna U4 U4 spliceosomal RNA 8942418 protein-coding Kif1b kinesin family member 1B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); kinase binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN anterograde neuronal dense core vesicle transport (ortholog); anterograde synaptic vesicle transport (ortholog); apoptotic process involved in development (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN cytoplasmic vesicle (ortholog); mitochondrion (ortholog); neuron projection (ortholog) NW_004955486 3366791 3503845 - 102021353 AGCD01059024;AGCD01059025;AGCD01059026;AGCD01059027;AGCD01059028;AGCD01059029;AGCD01059030;AGCD01059031;AGCD01059032;GBBH01228626;GBCE01135289;XM_013504249 XP_013359703 MODEL 9007093 protein-coding Dnah12 dynein axonemal heavy chain 12 INVOLVED IN sperm axoneme assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955430 7039070 7272927 - 102014930 AGCD01029332;AGCD01029333;AGCD01029334;AGCD01029335;AGCD01029336;AGCD01029337;AGCD01029338;AGCD01029339;AGCD01029340;AGCD01029341;AGCD01029342;GBDI01175777;GBDK01394051;NM_001370885;XM_005387410;XM_013515596;XM_013515597;XM_013515598 NP_001357814;XP_005387467;XP_013371050;XP_013371051;XP_013371052 VALIDATED 8856806 protein-coding Tas1r1 taste 1 receptor member 1 ENCODES a protein that exhibits taste receptor activity (ortholog); INVOLVED IN sensory perception of umami taste (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955486 6056501 6065038 - 102007774 AGCD01059105;AGCD01059106;GBBH01067179;XM_005404078 XP_005404135 MODEL 8944457 pseudo LOC102003871 transcription and mRNA export factor ENY2 pseudogene NW_004955418 2196164 2198005 - 102003871 AGCD01018751;XM_005382119 MODEL 8733717 protein-coding Dynlt2b dynein light chain Tctex-type 2B ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); intraciliary retrograde transport (ortholog); regulation of cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary base (ortholog) NW_004955420 12515195 12528863 - 102011449 AGCD01020868;AGCD01020869;AGCD01020870;GBDF01081244;XM_005383130;XM_013513399 XP_005383187;XP_013368853 MODEL 8921300 pseudo LOC102007950 tubulin-specific chaperone A-like NW_004955446 19105862 19111198 + 102007950 AGCD01040423 MODEL 8753734 protein-coding Ttc17 tetratricopeptide repeat domain 17 INVOLVED IN actin filament polymerization (ortholog); cilium organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) NW_004955422 4019755 4119522 - 102026014 AGCD01022532;AGCD01022533;GBBH01188438;XM_005384085;XM_005384087;XM_013514117;XM_013514118;XM_013514119;XM_013514120;XM_013514121;XM_013514122 XP_005384142;XP_005384144;XP_013369571;XP_013369572;XP_013369573;XP_013369574;XP_013369575;XP_013369576 MODEL 8854523 protein-coding Scp2 sterol carrier protein 2 ENCODES a protein that exhibits acetyl-CoA C-acyltransferase activity (ortholog); acetyl-CoA C-myristoyltransferase activity (ortholog); cholesterol binding (ortholog); INVOLVED IN acylglycerol metabolic process (ortholog); arachidonate metabolic process (ortholog); bile acid metabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); mitochondrion (ortholog) NW_004955464 6097241 6224287 - 102014223 AGCD01050018;AGCD01050019;GBCQ01008435;XM_005398565;XM_005398566 XP_005398622;XP_005398623 MODEL 8768195 protein-coding Gdi1 GDP dissociation inhibitor 1 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); Rab GDP-dissociation inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of axonogenesis (ortholog); negative regulation of protein targeting to membrane (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); anemia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955580 935021 941081 + 102003189 AGCD01075630;GBBH01091858;XM_005414200;XM_013509689 XP_005414257;XP_013365143 MODEL 8971777 pseudo LOC102014192 calmodulin-alpha-like NW_004955588 210107 210570 + 102014192 AGCD01076095 MODEL 8721815 pseudo LOC102013028 protein-lysine N-methyltransferase N6AMT2 pseudogene NW_004955587 123785 124367 - 102013028 AGCD01076059 MODEL 8749961 protein-coding Sars1 seryl-tRNA synthetase 1 ENCODES a protein that exhibits enzyme binding (ortholog); molecular adaptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cytoplasmic translation (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955435 12642485 12659833 + 102025160 AGCD01033160;AGCD01033161;GBDF01045746;XM_005388851;XM_013516442 XP_005388908;XP_013371896 MODEL 8875480 protein-coding Tgm4 transglutaminase 4 ENCODES a protein that exhibits protein-glutamine gamma-glutamyltransferase activity (ortholog); INVOLVED IN mating plug formation (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); essential tremor (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955420 26736880 26766386 - 102010493 AGCD01021427;AGCD01021428;AGCD01021429;AGCD01021430;GBDI01171952;GBDJ01424037;XM_005383619 XP_005383676 MODEL 8700916 ncrna LOC102004612 uncharacterized LOC102004612 NW_004955422 13845624 13851380 - 102004612 AGCD01022839;GBCE01145779;XR_001233893;XR_260876 MODEL 8721043 ncrna LOC102009858 uncharacterized LOC102009858 NW_004955426 4649998 4654801 + 102009858 AGCD01026105;GBDF01248724;XR_261189 MODEL 39132323 snrna U6 U6 spliceosomal RNA 39133047 snrna U6 U6 spliceosomal RNA 10289154 ncrna LOC106147357 uncharacterized LOC106147357 NW_004955408 4433998 4461039 + 106147357 AGCD01008112;AGCD01008113;GBCE01019063;XR_001232212;XR_001232214 MODEL 8850074 ncrna LOC102019271 uncharacterized LOC102019271 NW_004955480 8712236 8827968 - 102019271 AGCD01056730;AGCD01056731;AGCD01056732;AGCD01056733;GBBH01073803;XR_001230895;XR_001230896;XR_001230897;XR_001230899;XR_263747 MODEL 39132662 snrna U6 U6 spliceosomal RNA 8872743 protein-coding Skor1 SKI family transcriptional corepressor 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); SMAD binding (ortholog); INVOLVED IN negative regulation of BMP signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); nucleus (ortholog) NW_004955450 8184843 8195626 - 102005094 AGCD01042563;AGCD01042564;GBDF01124401;XM_013518829 XP_013374283 MODEL 8965128 protein-coding Dnah14 dynein axonemal heavy chain 14 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebral palsy (ortholog) NW_004955520 418041 735810 - 102005744 AGCD01068016;AGCD01068017;AGCD01068018;AGCD01068019;AGCD01068020;AGCD01068021;AGCD01068022;AGCD01068023;AGCD01068024;AGCD01068025;AGCD01068026;AGCD01068027;AGCD01068028;AGCD01068029;AGCD01068030;AGCD01068031;GBDF01049700;XM_013507033;XM_013507034;XM_013507035;XM_013507036;XM_013507037;XM_013507038;XM_013507039;XM_013507040;XM_013507041;XM_013507042;XM_013507043;XM_013507044;XM_013507045;XM_013507046;XM_013507047;XM_013507048 XP_013362487;XP_013362488;XP_013362489;XP_013362490;XP_013362491;XP_013362492;XP_013362493;XP_013362494;XP_013362495;XP_013362496;XP_013362497;XP_013362498;XP_013362499;XP_013362500;XP_013362501;XP_013362502 MODEL 8781423 protein-coding Cxxc5 CXXC finger protein 5 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); methyl-CpG binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); regulation of generation of precursor metabolites and energy (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955418 932198 965894 - 102013719 AGCD01018694;AGCD01018695;GBDK01075972;XM_005382053;XM_005382054;XM_005382055;XM_005382056;XM_005382057;XM_013512966 XP_005382110;XP_005382111;XP_005382112;XP_005382113;XP_005382114;XP_013368420 MODEL 8835092 protein-coding Slc25a3 solute carrier family 25 member 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); melanoma (ortholog); Mitochondrial Phosphate Carrier Deficiency (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955405 34584676 34591470 + 102030035 AGCD01005379;AGCD01005380;GBBH01000009;GBDJ01019336;XM_013518582;XM_013518583 XP_013374036;XP_013374037 MODEL 8906021 ncrna LOC102018850 uncharacterized LOC102018850 NW_004955427 23573541 23591628 - 102018850 AGCD01027486;XR_261286 MODEL 39132947 misc_rna Y_RNA Y RNA 8716887 protein-coding Lsm8 LSM8 homolog, U6 small nuclear RNA associated INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lymphoma (ortholog); FOUND IN Lsm2-8 complex (ortholog); nucleus (ortholog); precatalytic spliceosome (ortholog) NW_004955432 23818036 23823550 + 102017691 AGCD01031298;GBCE01029815;XM_005388137 XP_005388194 MODEL 8887057 ncrna LOC102010653 uncharacterized LOC102010653 NW_004955403 10370654 10380440 + 102010653 AGCD01001921;GBDF01176244;XR_001234452;XR_001234453;XR_259166 MODEL 8907648 protein-coding Dynlt3 dynein light chain Tctex-type 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of mitotic cell cycle (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasmic dynein complex (ortholog); kinetochore (ortholog); mitotic spindle astral microtubule (ortholog) NW_004955587 828730 838614 - 102012384 AGCD01076070;GBBH01004194;XM_005414452 XP_005414509 MODEL 8946623 protein-coding Sync syncoilin, intermediate filament protein INVOLVED IN intermediate filament-based process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuromuscular junction (ortholog) NW_004955452 10975039 10984598 - 102021622 AGCD01044319;GBBH01218826;GBCB01022029;XM_013519546;XM_013519547 XP_013375000;XP_013375001 MODEL 8800749 protein-coding Braf B-Raf proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); MAP kinase kinase activity (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); CD4-positive or CD8-positive, alpha-beta T cell lineage commitment (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); PARTICIPATES IN adenosine signaling pathway; altered extracellular signal-regulated Raf/Mek/Erk signaling pathway; colorectal cancer pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); amblyopia (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955494 2567238 2712708 + 102018105 AGCD01061441;AGCD01061442;AGCD01061443;AGCD01061444;AGCD01061445;AGCD01061446;AGCD01061447;AGCD01061448;GBDF01011297;GBDF01011303;XM_005405413;XM_005405415;XM_005405418;XM_005405419;XM_013504993;XM_013504994;XM_013504995;XM_013504996;XM_013504997;XR_001231320;XR_001231321 XP_005405470;XP_005405472;XP_005405475;XP_005405476;XP_013360447;XP_013360448;XP_013360449;XP_013360450;XP_013360451 MODEL 8721022 pseudo LOC102009438 nucleobindin-2 pseudogene NW_004955580 212934 215509 + 102009438 AGCD01075591 MODEL 9060254 pseudo LOC102018045 laccase domain-containing protein 1-like NW_004955592 623122 623565 - 102018045 AGCD01076320 MODEL 8954288 protein-coding Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN brain development (ortholog); camera-type eye development (ortholog); establishment of protein localization to endoplasmic reticulum membrane (ortholog); ASSOCIATED WITH amenorrhea (ortholog); cataract (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955440 2551015 2645938 + 102007155 AGCD01036210;AGCD01036211;AGCD01036212;AGCD01036213;AGCD01036214;AGCD01036215;AGCD01036216;GBDI01170428;XM_005390760 XP_005390817 MODEL 39132807 snrna U6 U6 spliceosomal RNA 39131929 snrna U1 U1 spliceosomal RNA 9060807 pseudo LOC102012670 coiled-coil domain-containing protein 112 pseudogene NW_004955427 341416 343438 - 102012670 AGCD01026827;AGCD01026828 MODEL 8886494 protein-coding Layn layilin ENCODES a protein that exhibits hyaluronic acid binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog) NW_004955412 13282871 13298214 + 102015617 AGCD01012831;GBCE01024195;XM_013511017 XP_013366471 MODEL 8726943 pseudo LOC102021437 E3 SUMO-protein ligase PIAS2 pseudogene NW_004955415 14409004 14410892 - 102021437 AGCD01016298 MODEL 8717769 protein-coding Tomm40l translocase of outer mitochondrial membrane 40 like ENCODES a protein that exhibits preprotein binding (ortholog); transmembrane protein transporter activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrial outer membrane translocase complex (ortholog); mitochondrion (ortholog) NW_004955468 12981023 12984999 + 102008304 AGCD01052194;GBCE01159608;XM_005400273;XM_013522479 XP_005400330;XP_013377933 MODEL 9034718 ncrna LOC102016113 uncharacterized LOC102016113 NW_004955445 10661247 10664768 + 102016113 AGCD01039677;GBDF01049922;XR_001235557;XR_001235558 MODEL 8911657 protein-coding Snap23 synaptosome associated protein 23 ENCODES a protein that exhibits fusogenic activity (ortholog); SNAP receptor activity (ortholog); syntaxin binding (ortholog); INVOLVED IN cytotoxic T cell degranulation (ortholog); endosome to plasma membrane protein transport (ortholog); exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Experimental Liver Cirrhosis (ortholog); Myocardial Ischemia (ortholog); FOUND IN adherens junction (ortholog); azurophil granule (ortholog); cytoplasm (ortholog) NW_004955416 9191123 9225103 + 102022915 AGCD01017080;GBCQ01039038;XM_005381344;XM_013512570;XM_013512571 XP_005381401;XP_013368024;XP_013368025 MODEL 8766605 protein-coding Kif1c kinesin family member 1C INVOLVED IN anterograde neuronal dense core vesicle transport (ortholog); retrograde neuronal dense core vesicle transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955467 10399768 10423249 + 102024544 AGCD01051563;GBCB01004220;GBDI01060109;XM_005399633;XM_005399634 XP_005399690;XP_005399691 MODEL 8815556 protein-coding LOC102003872 olfactory receptor 1A1-like NW_004955481 248188 249135 + 102003872 AGCD01056784;XM_005402915 XP_005402972 MODEL 8805435 protein-coding Tctn1 tectonic family member 1 INVOLVED IN central nervous system interneuron axonogenesis (ortholog); cilium assembly (ortholog); dorsal/ventral neural tube patterning (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN ciliary transition zone (ortholog); extracellular region (ortholog); membrane (ortholog) NW_004955482 7504554 7533605 + 102026219 AGCD01057472;AGCD01057473;AGCD01057474;GBBH01143740;XM_013503666;XM_013503667;XM_013503668;XM_013503669;XM_013503670;XM_013503671;XR_001230980;XR_001230982 XP_013359120;XP_013359121;XP_013359122;XP_013359123;XP_013359124;XP_013359125 MODEL 9018929 protein-coding Nsf N-ethylmaleimide sensitive factor, vesicle fusing ATPase ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent protein binding (ortholog); calcium ion binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); positive regulation of AMPA glutamate receptor clustering (ortholog); positive regulation of excitatory postsynaptic potential (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cocaine dependence (ortholog); developmental and epileptic encephalopathy 96 (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cytoplasmic vesicle (ortholog) NW_004955478 10610715 10732656 + 102017870 AGCD01056140;AGCD01056141;AGCD01056142;AGCD01056143;AGCD01056144;AGCD01056145;AGCD01056146;GBCE01188483;GBDF01162589;XM_005402272 XP_005402329 MODEL 8701912 protein-coding Il4i1 interleukin 4 induced 1 ENCODES a protein that exhibits L-amino-acid oxidase activity (ortholog); L-phenylalaine oxidase activity (ortholog); INVOLVED IN L-phenylalanine catabolic process (ortholog); L-tryptophan catabolic process (ortholog); L-tyrosine catabolic process (ortholog); PARTICIPATES IN Canavan disease pathway; glycine N-methyltransferase deficiency pathway; homocystinuria pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN acrosomal vesicle (ortholog); extracellular region (ortholog); immunological synapse (ortholog) NW_004955559 1012634 1047051 + 102025183 AGCD01073626;GBDF01006554;XM_005412805;XM_005412806;XM_005412808;XM_013508954;XM_013508955;XM_013508956;XM_013508957;XM_013508958;XM_013508959;XM_013508960;XM_013508961;XM_013508962;XM_013508963;XM_013508964;XM_013508965 XP_005412862;XP_005412863;XP_005412865;XP_013364408;XP_013364409;XP_013364410;XP_013364411;XP_013364412;XP_013364413;XP_013364414;XP_013364415;XP_013364416;XP_013364417;XP_013364418;XP_013364419 MODEL 8958840 ncrna LOC102023194 uncharacterized LOC102023194 NW_004955538 2857005 2863163 + 102023194 AGCD01071143;GBDF01016111;XR_264805 MODEL 9058100 ncrna LOC102020324 uncharacterized LOC102020324 NW_004955469 5243140 5244995 - 102020324 AGCD01052346;GBDF01148382;XR_263432 MODEL 9022670 protein-coding LOC102003559 HRAS-like suppressor 2 NW_004955422 21458082 21474996 + 102003559 AGCD01023119;AGCD01023120;AGCD01023121;GBBH01000367;XM_005384675;XM_013514294;XM_013514295;XM_013514296 XP_005384732;XP_013369748;XP_013369749;XP_013369750 MODEL 8710624 protein-coding Ttc19 tetratricopeptide repeat domain 19 INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); ASSOCIATED WITH apraxia (ortholog); asthma (ortholog); Ataxia (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955467 1381105 1405509 + 102014124 AGCD01051262;AGCD01051263;AGCD01051264;GBCE01045510;GBCQ01125396;XM_005399316 XP_005399373 MODEL 8762681 protein-coding LOC102005330 uncharacterized LOC102005330 NW_004955637 38088 43799 + 102005330 AGCD01077644;AGCD01077645;XM_005415045 XP_005415102 MODEL 8852156 protein-coding Gxylt2 glucoside xylosyltransferase 2 ENCODES a protein that exhibits UDP-xylosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via glucose (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog) NW_004955421 15240112 15328829 - 102027536 AGCD01021973;AGCD01021974;AGCD01021975;AGCD01021976;AGCD01021977;AGCD01021978;AGCD01021979;GBCE01060525;GBDF01241393;XM_005383767 XP_005383824 MODEL 8936293 protein-coding Slfn14 schlafen family member 14 ENCODES a protein that exhibits ribosome binding (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN mRNA catabolic process (ortholog); platelet maturation (ortholog); rRNA catabolic process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); Fetal Growth Retardation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955481 10037941 10046549 - 102015406 AGCD01057135;GBBH01083245;XM_005402875 XP_005402932 MODEL 9015417 protein-coding Fkbp1b FKBP prolyl isomerase 1B ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); calcium channel regulator activity (ortholog); cyclic nucleotide binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); insulin secretion (ortholog); negative regulation of calcium-mediated signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cardiomyopathy (ortholog); catecholaminergic polymorphic ventricular tachycardia (ortholog); FOUND IN calcium channel complex (ortholog); cytoplasm (ortholog); membrane (ortholog) NW_004955469 6263271 6274823 + 102023893 AGCD01052376;GBCB01028793;GBDF01063636;XM_005400373 XP_005400430 MODEL 8991232 protein-coding Glt1d1 glycosyltransferase 1 domain containing 1 ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN cytosol (ortholog) NW_004955482 2208059 2283298 - 102024909 AGCD01057230;AGCD01057231;AGCD01057232;AGCD01057233;AGCD01057234;AGCD01057235;AGCD01057236;GBDF01003661;GBDI01147114;XM_013503709 XP_013359163 MODEL 8940493 ncrna LOC102022154 uncharacterized LOC102022154 NW_004955404 2424413 2428084 + 102022154 AGCD01003258;GBDJ01337735;XR_001234589;XR_259290 MODEL 10205569 ncrna LOC106147358 uncharacterized LOC106147358 NW_004955546 2807548 2812322 + 106147358 AGCD01072101;GBDI01066469;XR_001232213 MODEL 8904660 protein-coding Tas1r2 taste 1 receptor member 2 ENCODES a protein that exhibits sweet taste receptor activity (ortholog); taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of sweet taste (ortholog); positive regulation of cytokinesis (ortholog); sensory perception of sweet taste (ortholog); FOUND IN G protein-coupled receptor dimeric complex (ortholog); signaling receptor complex (ortholog); sweet taste receptor complex (ortholog) NW_004955527 377269 392833 + 102018219 AGCD01069383;GBDF01112496;XM_013507373 XP_013362827 MODEL 8999985 protein-coding Skor2 SKI family transcriptional corepressor 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone deacetylase binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell development (ortholog); cerebellar Purkinje cell differentiation (ortholog); cerebellum morphogenesis (ortholog); ASSOCIATED WITH Dysarthria (ortholog); sarcoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955402 32577189 32618611 - 102027366 AGCD01000826;AGCD01000827;GBDF01021613;XM_013510345 XP_013365799 MODEL 8969834 protein-coding F12 coagulation factor XII ENCODES a protein that exhibits peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN blood coagulation (ortholog); Factor XII activation (ortholog); plasma kallikrein-kinin cascade (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acquired angioedema (ortholog); angioedema (ortholog); C1 inhibitor deficiency (ortholog); FOUND IN extracellular region (ortholog) NW_004955408 29644279 29665161 - 102027946 AGCD01008765;GBDF01084005;XM_005376441;XM_005376442 XP_005376498;XP_005376499 MODEL 8871459 protein-coding Scp2d1 SCP2 sterol binding domain containing 1 NW_004955415 27215991 27229799 + 102018922 AGCD01016623;AGCD01016624;GBDF01010710;XM_005380936;XM_013512406;XM_013512407 XP_005380993;XP_013367860;XP_013367861 MODEL 8828161 pseudo LOC102013029 cyclic AMP-dependent transcription factor ATF-4 pseudogene NW_004955402 34589714 34591735 + 102013029 AGCD01000866 MODEL 8774558 protein-coding LOC102014195 alpha-fetoprotein-like NW_004955611 38479 41119 - 102014195 AGCD01077139;GBBH01032074;GBBH01032078;XM_005414938 XP_005414995 MODEL 730469332 snrna U4atac U4atac minor spliceosomal RNA 8767267 protein-coding Syncrip synaptotagmin binding cytoplasmic RNA interacting protein ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); poly(A) binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); circadian rhythm (ortholog); CRD-mediated mRNA stabilization (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); CRD-mediated mRNA stability complex (ortholog); cytoplasm (ortholog) NW_004955411 13068078 13096936 - 102021220 AGCD01011866;GBCQ01067050;GBCQ01067051;XM_005377711 XP_005377768 MODEL 8930427 protein-coding Sars2 seryl-tRNA synthetase 2, mitochondrial ASSOCIATED WITH cataract (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955468 603778 613475 + 102003009 AGCD01051719;GBCQ01127049;XM_005399804 XP_005399861 MODEL 39132324 snrna U6 U6 spliceosomal RNA 8775480 protein-coding Tgm5 transglutaminase 5 ASSOCIATED WITH allergic disease (ortholog); genetic disease (ortholog); peeling skin syndrome 1 (ortholog) NW_004955416 9808903 9842784 - 102030305 AGCD01017099;GBDI01211861;XM_005381369;XR_001233282 XP_005381426 MODEL 39132809 snrna U6 U6 spliceosomal RNA 39131930 snrna U1 U1 spliceosomal RNA 8957487 ncrna LOC102019274 uncharacterized LOC102019274 NW_004955482 9786132 9790762 - 102019274 AGCD01057583;XR_263854 MODEL 39132663 snrna U6 U6 spliceosomal RNA 8967113 protein-coding Glt6d1 glycosyltransferase 6 domain containing 1 NW_004955513 4792103 4812302 + 102027441 AGCD01066939;AGCD01066940;GBDF01050584;XM_013506564;XM_013506565 XP_013362018;XP_013362019 MODEL 8911408 ncrna LOC102016118 uncharacterized LOC102016118 NW_004955450 15980124 15994008 + 102016118 AGCD01042826;GBDJ01165643;XR_001235902;XR_001235903 MODEL 8965657 pseudo LOC102025357 caspase-3-like NW_004955417 10514744 10515995 + 102025357 AGCD01018075;AGCD01018076 MODEL 9053529 protein-coding Slc25a30 solute carrier family 25 member 30 ENCODES a protein that exhibits solute:inorganic anion antiporter activity (ortholog); INVOLVED IN inorganic anion transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955518 3182085 3203061 + 102014937 AGCD01067795;GBCQ01178160;XM_005409085 XP_005409142 MODEL 39132948 misc_rna Y_RNA Y RNA 9047280 protein-coding Dnah17 dynein axonemal heavy chain 17 INVOLVED IN outer dynein arm assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axoneme (ortholog); outer dynein arm (ortholog); sperm end piece (ortholog) NW_004955506 4042768 4161022 + 102007139 AGCD01065324;AGCD01065325;AGCD01065326;GBDF01045118;XM_005407377;XM_013506036 XP_005407434;XP_013361490 MODEL 8724553 protein-coding Kif20a kinesin family member 20A ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); midbody abscission (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN midbody (ortholog); mitotic spindle (ortholog); spindle (ortholog) NW_004955418 2222398 2232775 - 102004929 AGCD01018753;GBDF01125758;XM_005382123 XP_005382180 MODEL 8775847 protein-coding Lsmem1 leucine rich single-pass membrane protein 1 ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); thymoma (ortholog); FOUND IN cytosol (ortholog) NW_004955410 16224294 16235975 + 102016139 AGCD01010951;GBDI01258132;XM_005377321 XP_005377378 MODEL 8878434 protein-coding Gdi2 GDP dissociation inhibitor 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); Rab GDP-dissociation inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of cilium assembly (ortholog); negative regulation of protein localization to cilium (ortholog); small GTPase-mediated signal transduction (ortholog); PARTICIPATES IN Rab family mediated signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); Down syndrome (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); synapse (ortholog) NW_004955421 22449620 22480721 - 102026648 AGCD01022136;AGCD01022137;GBBH01032868;GBDF01002947;XM_005383848;XM_005383849;XM_013513666 XP_005383905;XP_005383906;XP_013369120 MODEL 8806460 ncrna LOC102009439 uncharacterized LOC102009439 NW_004955448 13394879 13451616 + 102009439 AGCD01041588;AGCD01041589;AGCD01041590;AGCD01041591;GBDK01000836;XR_262470 MODEL 8798804 protein-coding LOC102020325 uncharacterized LOC102020325 NW_004955414 15650867 15654793 - 102020325 AGCD01015187;GBDF01003766;XM_005379874;XR_001233063 XP_005379931 MODEL 9048452 ncrna LOC102004619 uncharacterized LOC102004619 NW_004955497 162494 196973 - 102004619 AGCD01062402;GBCC01014237;XR_264187 MODEL 9061448 ncrna LOC102009859 uncharacterized LOC102009859 NW_004955427 7919836 7924927 + 102009859 AGCD01027059;GBDF01303674;XR_001234333;XR_001234334 MODEL 9061137 protein-coding Ttc21a tetratricopeptide repeat domain 21A INVOLVED IN flagellated sperm motility (ortholog); spermatid development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955427 24833021 24862199 - 102028112 AGCD01027524;GBDF01085603;XM_013515069;XM_013515070;XM_013515071;XM_013515072;XM_013515073;XM_013515074 XP_013370523;XP_013370524;XP_013370525;XP_013370526;XP_013370527;XP_013370528 MODEL 8936987 pseudo LOC102012671 pescadillo homolog pseudogene NW_004955428 5346972 5362433 + 102012671 AGCD01027708;XR_261310 MODEL 9034137 protein-coding Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 ENCODES a protein that exhibits enzyme regulator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN establishment of protein localization to endoplasmic reticulum membrane (ortholog); positive regulation of autophagosome assembly (ortholog); positive regulation of endoplasmic reticulum tubular network organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); GTPase complex (ortholog) NW_004955520 3411504 3483703 + 102022531 AGCD01068102;AGCD01068103;GBDK01092646;XM_005409267;XM_005409268;XM_005409269 XP_005409324;XP_005409325;XP_005409326 MODEL 8754814 protein-coding Gyg1 glycogenin 1 ENCODES a protein that exhibits D-glucose binding (ortholog); glycogenin glucosyltransferase activity (ortholog); manganese ion binding (ortholog); INVOLVED IN glycogen biosynthetic process (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN catalytic complex (ortholog) NW_004955474 8491100 8523280 - 102007007 AGCD01054554;GBBH01118449;XM_013502748;XM_013502749 XP_013358202;XP_013358203 MODEL 8739963 protein-coding LOC102007951 cytochrome P450 3A9-like NW_004955573 1323275 1354705 - 102007951 AGCD01075041;AGCD01075042;AGCD01075043;AGCD01075044;XM_013509451 XP_013364905 MODEL 8705041 protein-coding Tomm5 translocase of outer mitochondrial membrane 5 PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; presequence pathway of mitochondrial protein import; ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrial outer membrane translocase complex (ortholog); mitochondrion (ortholog) NW_004955419 28897328 28900289 + 102006133 AGCD01020479;GBCQ01035619;XM_005382876 XP_005382933 MODEL 8842654 protein-coding LOC102021446 olfactory receptor 6F1 NW_004955418 30343310 30344236 - 102021446 AGCD01019514;XM_005382336 XP_005382393 MODEL 8889940 protein-coding Fkbp2 FKBP prolyl isomerase 2 NW_004955422 20834741 20837594 - 102017784 AGCD01023092;GBBH01031180;XM_005384627;XM_005384628;XM_005384630;XM_005384631;XM_005384632 XP_005384684;XP_005384685;XP_005384687;XP_005384688;XP_005384689 MODEL 8724109 ncrna LOC102018853 uncharacterized LOC102018853 NW_004955433 21601809 21606853 + 102018853 AGCD01031928;GBDF01290084;XR_261604 MODEL 9016047 protein-coding LOC102009861 zinc finger protein 420-like NW_004955429 13414895 13444098 + 102009861 AGCD01028748;AGCD01028749;GBDF01252222;XM_013515503;XM_013515504;XM_013515505;XM_013515506 XP_013370957;XP_013370958;XP_013370959;XP_013370960 MODEL 10144613 protein-coding LOC106147359 translation initiation factor IF-2-like NW_004955547 62642 121802 - 106147359 AGCD01072125;AGCD01072126;AGCD01072127;AGCD01072128;AGCD01072129;AGCD01072130;AGCD01072131;AGCD01072132;GBDF01030874;XM_013508440 XP_013363894 MODEL 8970865 protein-coding Tctn2 tectonic family member 2 INVOLVED IN cilium assembly (ortholog); protein localization to ciliary transition zone (ortholog); smoothened signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN ciliary transition zone (ortholog); MKS complex (ortholog) NW_004955482 5344113 5362519 - 102013934 AGCD01057326;GBDK01276687;XM_005403021;XM_013503545;XM_013503547;XR_001230953;XR_001230954 XP_005403078;XP_013358999;XP_013359001 MODEL 8936614 protein-coding Snap25 synaptosome associated protein 25 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); lipid binding (ortholog); myosin binding (ortholog); INVOLVED IN associative learning (ortholog); axonogenesis (ortholog); calcium ion-regulated exocytosis of neurotransmitter (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH Adducted Thumbs Syndrome (ortholog); arthrogryposis multiplex congenita (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); axonal growth cone (ortholog) NW_004955415 20133361 20218840 + 102023903 AGCD01016485;AGCD01016486;GBDK01292814;XM_005380870;XM_005380871;XM_005380872 XP_005380927;XP_005380928;XP_005380929 MODEL 8809209 protein-coding Nsfl1c NSFL1 cofactor ENCODES a protein that exhibits ATPase binding (ortholog); phospholipid binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN establishment of mitotic spindle orientation (ortholog); Golgi organization (ortholog); membrane fusion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN chromosome (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955596 648978 673586 - 102016007 AGCD01076525;GBDK01127037;XM_005414707;XM_005414708 XP_005414764;XP_005414765 MODEL 9057942 ncrna LOC102010654 uncharacterized LOC102010654 NW_004955451 2820724 2842826 + 102010654 AGCD01043023;GBDF01304074;XR_262571 MODEL 8725799 pseudo LOC102023197 septin-11 pseudogene NW_004955438 18236201 18238017 - 102023197 AGCD01035467;XM_005390398 MODEL 9002231 protein-coding Il4r interleukin 4 receptor ENCODES a protein that exhibits interleukin-13 receptor activity (ortholog); interleukin-4 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); defense response to protozoan (ortholog); immunoglobulin mediated immune response (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acne (ortholog); acute myeloid leukemia (ortholog); allergic conjunctivitis (ortholog); FOUND IN extracellular region (ortholog); interleukin-13 receptor complex (ortholog); interleukin-4 receptor complex (ortholog) NW_004955493 5546340 5580745 + 102006675 AGCD01061070;AGCD01061071;GBDJ01082206;XM_005405137 XP_005405194 MODEL 8979061 protein-coding LOC102003561 BPI fold-containing family A member 2-like NW_004955422 27993083 28136036 + 102003561 AGCD01023340;AGCD01023341;AGCD01023342;AGCD01023343;GBBH01222071;XM_005384852;XM_013514264;XM_013514265;XM_013514266;XM_013514267;XM_013514268;XM_013514269;XM_013514270;XM_013514271;XM_013514273;XM_013514274;XM_013514275 XP_005384909;XP_013369718;XP_013369719;XP_013369720;XP_013369721;XP_013369722;XP_013369723;XP_013369724;XP_013369725;XP_013369727;XP_013369728;XP_013369729 MODEL 8998177 pseudo LOC102018046 eukaryotic translation initiation factor 5 pseudogene NW_004955596 640860 643263 + 102018046 AGCD01076525 MODEL 39133048 snrna U6 U6 spliceosomal RNA 8839654 protein-coding F13a1 coagulation factor XIII A chain ENCODES a protein that exhibits protein-glutamine gamma-glutamyltransferase activity (ortholog); INVOLVED IN blood coagulation (ortholog); blood coagulation, fibrin clot formation (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); arteriosclerosis (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955465 7444118 7617366 + 102006885 AGCD01050461;AGCD01050462;AGCD01050463;AGCD01050464;GBBH01102684;XM_013521832;XM_013521833 XP_013377286;XP_013377287 MODEL 8988144 ncrna LOC102005333 uncharacterized LOC102005333 NW_004955452 11263904 11270100 + 102005333 AGCD01044333;GBDJ01321809;XR_001236063;XR_262678 MODEL 8704678 protein-coding Llph LLP homolog, long-term synaptic facilitation factor INVOLVED IN dendrite extension (ortholog); positive regulation of dendritic spine development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955458 12785194 12791918 - 102023233 AGCD01047789;GBDF01120063;XM_005397449;XM_005397450;XM_005397451;XM_013520895 XP_005397506;XP_005397507;XP_005397508;XP_013376349 MODEL 10234109 protein-coding Slfnl1 schlafen like 1 NW_004955537 814859 819238 - 106147270 AGCD01070875;XM_013507793;XM_013507794 XP_013363247;XP_013363248 MODEL 39132326 snrna U6 U6 spliceosomal RNA 39131931 snrna U1 U1 spliceosomal RNA 8774048 protein-coding Tgm6 transglutaminase 6 ENCODES a protein that exhibits protein-glutamine gamma-glutamyltransferase activity (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); genetic disease (ortholog); Parkinson's disease (ortholog); FOUND IN cytoplasm (ortholog) NW_004955415 13470268 13499500 + 102014664 AGCD01016250;AGCD01016251;GBDF01128911;XM_005380751 XP_005380808 MODEL 8935392 protein-coding LOC102019275 histone H2A type 1 NW_004955483 901347 913474 - 102019275 AGCD01057637;GBCQ01010632;XM_005403303;XM_005403304 XP_005403360;XP_005403361 MODEL 8760819 protein-coding Tas1r3 taste 1 receptor member 3 ENCODES a protein that exhibits sweet taste receptor activity (ortholog); taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of sweet taste (ortholog); sensory perception of sweet taste (ortholog); sensory perception of umami taste (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); colorectal cancer (ortholog); FOUND IN G protein-coupled receptor dimeric complex (ortholog); plasma membrane (ortholog); sweet taste receptor complex (ortholog) NW_004955486 9469954 9475421 - 102024012 AGCD01059187;GBCQ01086767;XM_005404231;XM_013504184;XM_013504185;XM_013504186;XM_013504188 XP_005404288;XP_013359638;XP_013359639;XP_013359640;XP_013359642 MODEL 8880631 protein-coding Skp1 S-phase kinase associated protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); cullin family protein binding (ortholog); F-box domain binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); homologous chromosome pairing at meiosis (ortholog); maintenance of protein location in nucleus (ortholog); PARTICIPATES IN Notch signaling pathway; nuclear factor kappa B signaling pathway; nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); Keratoconus 1 (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN centrosome (ortholog); chromosome, centromeric region (ortholog); Cul7-RING ubiquitin ligase complex (ortholog) NW_004955408 5393851 5412644 - 102012613 AGCD01008133;AGCD01008134;GBBH01003740;GBCB01004285;XM_005376136 XP_005376193 MODEL 8981400 protein-coding Brap BRCA1 associated protein ENCODES a protein that exhibits identical protein binding (ortholog); protein sequestering activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN MAPK cascade (ortholog); negative regulation of signal transduction (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); ubiquitin ligase complex (ortholog) NW_004955482 8254709 8282416 - 102029515 AGCD01057515;GBDF01246857;XM_005403172 XP_005403229 MODEL 8986950 protein-coding Scpep1 serine carboxypeptidase 1 ENCODES a protein that exhibits serine-type carboxypeptidase activity (ortholog); INVOLVED IN blood vessel diameter maintenance (ortholog); negative regulation of blood pressure (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955451 5847371 5876286 - 102011933 AGCD01043182;AGCD01043183;AGCD01043184;GBCE01000239;XM_005394064 XP_005394121 MODEL 8902898 pseudo LOC102013034 mitochondrial inner membrane protease ATP23 homolog NW_004955402 57646854 57653921 + 102013034 AGCD01001505 MODEL 8874236 protein-coding Dnah2 dynein axonemal heavy chain 2 INVOLVED IN cilium movement (ortholog); cilium-dependent cell motility (ortholog); inner dynein arm assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axonemal dynein complex (ortholog); axoneme (ortholog); cilium (ortholog) NW_004955467 9107089 9210941 - 102003107 AGCD01051484;GBDI01187193;XM_005399455;XM_005399456;XM_005399457;XM_005399458 XP_005399512;XP_005399513;XP_005399514;XP_005399515 MODEL 8926288 protein-coding Kif20b kinesin family member 20B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); microtubule binding (ortholog); plus-end-directed microtubule motor activity (ortholog); INVOLVED IN neural tube closure (ortholog); neuron projection morphogenesis (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); contractile ring (ortholog) NW_004955425 3261269 3313891 - 102014468 AGCD01025284;AGCD01025285;GBDF01194821;XM_005385846 XP_005385903 MODEL 730469188 snrna U4atac U4atac minor spliceosomal RNA 8809766 protein-coding Syndig1 synapse differentiation inducing 1 ENCODES a protein that exhibits glutamate receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN intracellular protein transport (ortholog); positive regulation of synapse assembly (ortholog); regulation of postsynapse assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell body (ortholog); dendritic shaft (ortholog); dendritic spine (ortholog) NW_004955415 30909654 31005421 + 102008403 AGCD01016669;GBCQ01013508;XM_005380980;XM_013512392 XP_005381037;XP_013367846 MODEL 8886702 protein-coding Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of cytotoxic T cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN Cajal body (ortholog); catalytic step 2 spliceosome (ortholog); Golgi apparatus (ortholog) NW_004955422 19360641 19370623 - 102022394 AGCD01023002;GBCE01006992;XM_005384438 XP_005384495 MODEL 39132810 snrna U6 U6 spliceosomal RNA 8959217 protein-coding Dynlt4 dynein light chain Tctex-type 4 ENCODES a protein that exhibits protein phosphatase 1 binding (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN acrosomal vesicle (ortholog); axoneme (ortholog); cytoplasm (ortholog) NW_004955464 13417735 13419646 + 102007316 AGCD01050275;GBDI01118775;XM_005398725;XM_005398726;XM_005398727 XP_005398782;XP_005398783;XP_005398784 MODEL 8881084 pseudo LOC102003873 40S ribosomal protein S18 pseudogene NW_004955418 24453774 24454252 - 102003873 AGCD01019333 MODEL 39132664 snrna U6 U6 spliceosomal RNA 8837453 protein-coding Fkbp3 FKBP prolyl isomerase 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955409 16810934 16824380 + 102007864 AGCD01009743;AGCD01009744;GBDF01000475;XM_005376860 XP_005376917 MODEL 8751678 protein-coding Slc25a31 solute carrier family 25 member 31 ENCODES a protein that exhibits ATP:ADP antiporter activity (ortholog); INVOLVED IN male meiosis I (ortholog); regulation of mitochondrial membrane permeability (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH stomach cancer (ortholog); uterine carcinosarcoma (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial permeability transition pore complex (ortholog) NW_004955428 13648753 13667133 - 102007921 AGCD01027960;GBDF01052354;XM_005386748 XP_005386805 MODEL 39132949 misc_rna Y_RNA Y RNA 8986337 protein-coding LOC102016119 protocadherin alpha-C2 NW_004955611 153360 357143 - 102016119 AGCD01077147;AGCD01077148;AGCD01077149;AGCD01077150;AGCD01077151;AGCD01077152;AGCD01077153;AGCD01077154;AGCD01077155;AGCD01077156;AGCD01077157;AGCD01077158;AGCD01077159;AGCD01077160;AGCD01077161;AGCD01077162;AGCD01077163;AGCD01077164;GBCQ01014927;XM_005414941;XM_005414943;XM_005414945 XP_005414998;XP_005415000;XP_005415002 MODEL 9036983 ncrna LOC102014202 uncharacterized LOC102014202 NW_004955404 1262946 1265247 + 102014202 AGCD01003223;GBDF01087339;XR_001235125;XR_259285 MODEL 8738250 protein-coding Lsmem2 leucine rich single-pass membrane protein 2 ASSOCIATED WITH hepatocellular carcinoma (ortholog) NW_004955532 2096231 2101541 + 102029116 AGCD01070216;GBDK01198044;XM_005410256 XP_005410313 MODEL 8870052 protein-coding Snap29 synaptosome associated protein 29 ENCODES a protein that exhibits SNARE binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagosome membrane docking (ortholog); cilium assembly (ortholog); ASSOCIATED WITH CEDNIK syndrome (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN autophagosome (ortholog); ciliary pocket membrane (ortholog); cytoplasm (ortholog) NW_004955442 19419381 19446782 - 102026163 AGCD01038057;AGCD01038058;AGCD01038059;AGCD01038060;GBDF01082896;XM_005391838 XP_005391895 MODEL 8855649 protein-coding LOC102018049 vomeronasal type-2 receptor 116-like NW_004955622 20044 44768 - 102018049 AGCD01077381;XM_005415016 XP_005415073 MODEL 8893974 protein-coding LOC102020326 olfactory receptor 51A7 NW_004955414 20512630 20513568 + 102020326 AGCD01015377;XM_005380059 XP_005380116 MODEL 8986037 ncrna LOC102004620 uncharacterized LOC102004620 NW_004955497 6989452 7027099 - 102004620 AGCD01062651;AGCD01062652;AGCD01062653;AGCD01062654;GBBH01127272;XR_001231442;XR_001231443;XR_001231444 MODEL 8813340 pseudo LOC102005334 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial pseudogene NW_004955453 2433189 2438637 - 102005334 AGCD01044629 MODEL 9018778 pseudo LOC102012675 uncharacterized LOC102012675 NW_004955429 6718846 6761193 + 102012675 AGCD01028560;AGCD01028561;AGCD01028562;AGCD01028563;AGCD01028564 MODEL 8989949 protein-coding Ttc21b tetratricopeptide repeat domain 21B ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN Bergmann glial cell differentiation (ortholog); cerebellar Purkinje cell differentiation (ortholog); cerebellum development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); FOUND IN intraciliary transport particle A (ortholog) NW_004955449 8242327 8306012 + 102010959 AGCD01042009;AGCD01042010;GBDF01085390;XM_005393290 XP_005393347 MODEL 8845906 protein-coding LOC102022156 cytochrome c-like NW_004955405 15750007 15750318 - 102022156 AGCD01004951;XM_005374685 XP_005374742 MODEL 39132329 snrna U6 U6 spliceosomal RNA 8955665 protein-coding LOC102007953 olfactory receptor 2B6-like NW_004955576 1156143 1157078 + 102007953 AGCD01075361;XM_005413942 XP_005413999 MODEL 8765013 protein-coding Cybb cytochrome b-245 beta chain ENCODES a protein that exhibits electron transfer activity (ortholog); FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN cellular response to cadmium ion (ortholog); cellular response to ethanol (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Binge Drinking (ortholog); brain infarction (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); NADPH oxidase complex (ortholog) NW_004955587 781533 818149 + 102012042 AGCD01076070;GBDI01225603;XM_005414451 XP_005414508 MODEL 8809497 protein-coding LOC102025359 C-C motif chemokine 3 NW_004955481 10400276 10402146 - 102025359 AGCD01057146;GBDK01021644;XM_005402905 XP_005402962 MODEL 9039903 protein-coding Tomm6 translocase of outer mitochondrial membrane 6 PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; presequence pathway of mitochondrial protein import; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN mitochondrion (ortholog); TOM complex (ortholog) NW_004955437 8183219 8184602 + 102015762 AGCD01034480;GBCQ01000051;XM_005389697 XP_005389754 MODEL 8879911 ncrna LOC102021447 uncharacterized LOC102021447 NW_004955419 7019339 7024396 - 102021447 AGCD01019869;GBDF01146333;XR_260613 MODEL 8765167 pseudo LOC102018855 60S ribosomal protein L12-like NW_004955435 12047641 12048394 + 102018855 AGCD01033133 MODEL 9027625 ncrna LOC102003874 uncharacterized LOC102003874 NW_004955482 8396477 8398258 + 102003874 AGCD01057519;GBDF01127761;XR_263850 MODEL 8787782 protein-coding Tctn3 tectonic family member 3 INVOLVED IN cilium assembly (ortholog); positive regulation of apoptotic process (ortholog); smoothened signaling pathway (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); ciliopathy (ortholog); FOUND IN nucleus (ortholog) NW_004955507 1972645 1993967 - 102011565 AGCD01065575;GBDI01077907;XM_005407554 XP_005407611 MODEL 8881566 pseudo LOC102023198 speckle-type POZ protein pseudogene NW_004955546 94701 95906 + 102023198 AGCD01071949;XM_005411815 MODEL 9063767 protein-coding LOC102010656 laminin subunit alpha-3-like NW_004955649 79435 83763 - 102010656 AGCD01077784;AGCD01077785;GBDI01289779;GBDJ01229315;XM_013510173 XP_013365627 MODEL 8987814 protein-coding Tas2r16 taste 2 receptor member 16 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955479 4591015 4591920 - 102021343 AGCD01056326;XM_005402452 XP_005402509 MODEL 8744389 protein-coding Gdnf glial cell derived neurotrophic factor ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor binding (ortholog); growth factor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to dexamethasone stimulus (ortholog); ASSOCIATED WITH acoustic neuroma (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog); signaling receptor complex (ortholog) NW_004955426 22386613 22412324 - 102017258 AGCD01026616;GBDJ01107563;XM_005386218;XM_005386219;XM_005386220;XM_005386221;XM_005386222;XM_005386223;XM_013514924 XP_005386275;XP_005386276;XP_005386277;XP_005386278;XP_005386279;XP_005386280;XP_013370378 MODEL 8807864 protein-coding Nsg1 neuronal vesicle trafficking associated 1 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN amyloid precursor protein metabolic process (ortholog); apoptotic process (ortholog); endosomal transport (ortholog); ASSOCIATED WITH thymoma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); dendrite (ortholog); early endosome (ortholog) NW_004955514 5273810 5294925 - 102026460 AGCD01067150;AGCD01067151;GBCE01054320;GBDJ01271922;XM_005408832 XP_005408889 MODEL 8803342 protein-coding Il5 interleukin 5 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-5 receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cytokine-mediated signaling pathway (ortholog); interleukin-5-mediated signaling pathway (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; interleukin-4 signaling pathway; interleukin-5 signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); allergic asthma (ortholog); allergic contact dermatitis (ortholog); FOUND IN extracellular region (ortholog) NW_004955408 3937128 3951784 - 102029937 AGCD01008083;GBDK01154528;XM_005376103;XR_001231944 XP_005376160 MODEL 8962611 protein-coding LOC102009441 zinc finger protein 211 NW_004955584 469784 476250 + 102009441 AGCD01075942;GBDK01431604;XM_005414361;XM_005414362;XM_005414363;XM_005414365 XP_005414418;XP_005414419;XP_005414420;XP_005414422 MODEL 39133049 snrna U6 U6 spliceosomal RNA 9043386 protein-coding F13b coagulation factor XIII B chain INVOLVED IN blood coagulation (ortholog); blood coagulation, fibrin clot formation (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH factor XIII deficiency (ortholog); Factor XIII, B Subunit, Deficiency Of (ortholog); genetic disease (ortholog); FOUND IN extracellular region (ortholog) NW_004955406 33633911 33660506 - 102023224 AGCD01006485;AGCD01006486;GBDF01131030;XM_005375114;XM_005375115;XM_005375116 XP_005375171;XP_005375172;XP_005375173 MODEL 8914181 protein-coding Lman1 lectin, mannose binding 1 ENCODES a protein that exhibits cargo receptor activity (ortholog); identical protein binding (ortholog); metal ion binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); endoplasmic reticulum organization (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); PARTICIPATES IN protein secretory pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cargo receptor complex (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); endoplasmic reticulum (ortholog) NW_004955402 43465556 43495789 - 102014193 AGCD01001073;GBDI01115194;XM_005373001;XM_013511080 XP_005373058;XP_013366534 MODEL 8773399 protein-coding Lsp1 lymphocyte specific protein 1 INVOLVED IN cellular response to interleukin-7 (ortholog); chemotaxis (ortholog); defense response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog) NW_004955422 13664594 13697682 + 102030642 AGCD01022837;AGCD01022838;GBDJ01074693;XM_005384187;XM_013514167;XM_013514168;XM_013514169 XP_005384244;XP_013369621;XP_013369622;XP_013369623 MODEL 8808916 protein-coding Dnah3 dynein axonemal heavy chain 3 INVOLVED IN inner dynein arm assembly (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); sperm flagellum (ortholog) NW_004955493 211458 363988 - 102005720 AGCD01060843;AGCD01060844;AGCD01060845;AGCD01060846;AGCD01060847;GBBH01117267;XM_013504828 XP_013360282 MODEL 9000504 protein-coding Glt8d1 glycosyltransferase 8 domain containing 1 ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi membrane (ortholog) NW_004955430 2678166 2690555 - 102024832 AGCD01029174;AGCD01029175;AGCD01029176;GBDF01052118;GBDJ01225285;XM_013515590 XP_013371044 MODEL 39132812 snrna U6 U6 spliceosomal RNA 8966085 protein-coding LOC102012676 guanylate cyclase soluble subunit beta-2-like NW_004955431 4387868 4457281 - 102012676 AGCD01029996;AGCD01029997;AGCD01029998;AGCD01029999;XM_013515724 XP_013371178 MODEL 8870339 protein-coding Gyg2 glycogenin 2 ENCODES a protein that exhibits glycogenin glucosyltransferase activity (ortholog); INVOLVED IN glycogen biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cerebellar ataxia (ortholog); colon adenocarcinoma (ortholog) NW_004955499 1700858 1737893 + 102011134 AGCD01063380;AGCD01063381;AGCD01063382;GBBH01077818;GBBH01077823;XM_005406519 XP_005406576 MODEL 8879960 protein-coding Sart3 spliceosome associated factor 3, U4/U6 recycling protein ENCODES a protein that exhibits histone binding (ortholog); protein-macromolecule adaptor activity (ortholog); U4 snRNA binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); hematopoietic stem cell proliferation (ortholog); homeostasis of number of cells (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); cerebellar ataxia (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955455 9802260 9833326 - 102024529 AGCD01045931;GBCB01076004;XM_005396463;XM_005396464 XP_005396520;XP_005396521 MODEL 8852310 pseudo LOC102003562 olfactory receptor 140-like NW_004955422 257720 265363 - 102003562 AGCD01022401 MODEL 8850861 ncrna LOC102016120 uncharacterized LOC102016120 NW_004955403 31397939 31408658 + 102016120 AGCD01002416;AGCD01002417;GBCB01074998;XR_001233593;XR_001233594 MODEL 8849067 pseudo LOC102013036 olfactory receptor 2L3-like NW_004955619 80032 80977 + 102013036 AGCD01077334 MODEL 8981652 protein-coding Brat1 BRCA1 associated ATM activator 1 ENCODES a protein that exhibits ribonuclease inhibitor activity (ortholog); INVOLVED IN apoptotic process (ortholog); cell migration (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955460 12662005 12674223 - 102012169 AGCD01048661;GBDI01062771;XM_005397864;XM_013521148;XM_013521149;XM_013521150;XM_013521151;XM_013521152 XP_005397921;XP_013376602;XP_013376603;XP_013376604;XP_013376605;XP_013376606 MODEL 8896635 protein-coding LOC102018050 arylamine N-acetyltransferase 2-like NW_004955403 42312025 42335918 + 102018050 AGCD01002751;GBDK01432435;XM_005373604;XM_005373605;XM_005373606;XM_005373607;XM_013513595 XP_005373661;XP_005373662;XP_005373663;XP_005373664;XP_013369049 MODEL 8759743 pseudo LOC102009446 heat shock cognate 71 kDa protein pseudogene NW_004955402 47210640 47213865 + 102009446 AGCD01001177;XR_259129 MODEL 10080960 pseudo LOC106147360 40S ribosomal protein SA-like NW_004955547 529959 530897 - 106147360 AGCD01072162 MODEL 39131932 snrna U1 U1 spliceosomal RNA 9008028 ncrna LOC102020328 uncharacterized LOC102020328 NW_004955414 33108363 33109387 - 102020328 AGCD01015798;GBDF01127948;XR_260225 MODEL 8994520 protein-coding Kif21a kinesin family member 21A ENCODES a protein that exhibits ankyrin repeat binding (ortholog); plus-end-directed microtubule motor activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); cortical microtubule organization (ortholog); regulation of axon guidance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aniridia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axonal growth cone (ortholog); presynapse (ortholog) NW_004955505 933254 1000039 + 102025143 AGCD01064964;GBCE01108734;GBDI01325563;XM_013505950 XP_013361404 MODEL 8850080 pseudo LOC102019280 protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 pseudogene NW_004955420 1690583 1691948 - 102019280 AGCD01020576 MODEL 39132330 snrna U6 U6 spliceosomal RNA 8708823 pseudo LOC102025361 coiled-coil domain-containing protein 152 pseudogene NW_004955418 6274363 6275849 + 102025361 AGCD01018870;AGCD01018871 MODEL 8970783 protein-coding LOC102009862 olfactory receptor 1440 NW_004955511 3826101 3827067 - 102009862 AGCD01066477;XM_005408060 XP_005408117 MODEL 39132950 misc_rna Y_RNA Y RNA 8924926 protein-coding Lman1l lectin, mannose binding 1 like ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); prostate cancer (ortholog) NW_004955450 3111004 3123266 - 102009444 AGCD01042422;GBDJ01215387;XM_005393541;XM_005393542 XP_005393598;XP_005393599 MODEL 405822141 protein-coding SCPPPQ1 secretory calcium-binding phosphoprotein proline-glutamine rich 1 8767245 protein-coding Lbh LBH regulator of WNT signaling pathway INVOLVED IN mammary gland development (ortholog); mammary gland epithelial cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); high grade glioma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) NW_004955469 12054727 12078796 + 102020650 AGCD01052576;GBDI01078372;XM_005400551 XP_005400608 MODEL 8991663 ncrna LOC102014205 uncharacterized LOC102014205 NW_004955405 34201814 34209313 - 102014205 AGCD01005369;GBDF01287702;XR_259428 MODEL 39133739 snrna U5 U5 spliceosomal RNA 8958270 ncrna LOC102023199 uncharacterized LOC102023199 NW_004955441 15211964 15214246 + 102023199 AGCD01037244;GBDF01213433;XR_262084 MODEL 8705732 protein-coding Tas2r3 taste 2 receptor member 3 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog) NW_004955494 1799438 1800388 - 102006678 AGCD01061424;XM_005405533 XP_005405590 MODEL 9033298 protein-coding Slirp SRA stem-loop interacting RNA binding protein ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); mitochondrial mRNA polyadenylation (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); mitochondrial matrix (ortholog) NW_004955438 1556462 1561561 + 102018768 AGCD01034986;GBDF01046525;XM_005390211 XP_005390268 MODEL 8898904 protein-coding Nsg2 neuronal vesicle trafficking associated 2 INVOLVED IN regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); dendrite (ortholog); early endosome (ortholog) NW_004955408 26664884 26724949 + 102004358 AGCD01008672;GBBH01045170;XM_005376357 XP_005376414 MODEL 39133050 snrna U6 U6 spliceosomal RNA 8961721 ncrna LOC102004621 uncharacterized LOC102004621 NW_004955505 1555708 1583604 - 102004621 AGCD01064974;AGCD01064975;GBDF01014944;XR_001231574;XR_264301 MODEL 8810376 protein-coding Gdpd1 glycerophosphodiester phosphodiesterase domain containing 1 ENCODES a protein that exhibits phosphatidylcholine lysophospholipase A1 activity (ortholog); phosphoric diester hydrolase activity (ortholog); INVOLVED IN N-acylethanolamine metabolic process (ortholog); phospholipid metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955451 3751229 3799651 - 102006861 AGCD01043071;AGCD01043072;GBBH01069797;GBDF01048584;XM_013519210 XP_013374664 MODEL 8765822 protein-coding Snap47 synaptosome associated protein 47 INVOLVED IN exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); long-term synaptic potentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN BLOC-1 complex (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) NW_004955581 486087 525171 - 102017180 AGCD01075675;GBCE01008670;XM_005414246;XM_005414247;XM_013509738;XM_013509740 XP_005414303;XP_005414304;XP_013365192;XP_013365194 MODEL 8866688 protein-coding Il5ra interleukin 5 receptor subunit alpha ENCODES a protein that exhibits interleukin-5 receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); inflammatory response to antigenic stimulus (ortholog); interleukin-5-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-5 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); asthma (ortholog) NW_004955421 10211594 10259760 + 102021980 AGCD01021870;AGCD01021871;AGCD01021872;GBDF01113547;XM_005383750 XP_005383807 MODEL 8914371 protein-coding LOC102022164 transmembrane protein 198-like NW_004955458 3467969 3473114 + 102022164 AGCD01047303;GBDF01188087;XM_005397262;XM_005397264 XP_005397319;XP_005397321 MODEL 39132665 snrna U6 U6 spliceosomal RNA 8718868 protein-coding Ttc22 tetratricopeptide repeat domain 22 ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955464 4592667 4609148 + 102024775 AGCD01049992;GBDI01128402;XM_005398510;XM_013521666 XP_005398567;XP_013377120 MODEL 8820121 protein-coding Tgm7 transglutaminase 7 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955416 9847645 9870627 - 102003124 AGCD01017099;GBCQ01191296;XM_005381371 XP_005381428 MODEL 8822132 protein-coding Slc25a32 solute carrier family 25 member 32 ENCODES a protein that exhibits FAD transmembrane transporter activity (ortholog); INVOLVED IN mitochondrial FAD transmembrane transport (ortholog); PARTICIPATES IN folate cycle metabolic pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Exercise Intolerance (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955417 27530806 27545103 - 102021443 AGCD01018559;GBBH01025020;XM_013512707 XP_013368161 MODEL 8979168 protein-coding Tomm7 translocase of outer mitochondrial membrane 7 INVOLVED IN positive regulation of protein localization to mitochondrion (ortholog); positive regulation of type 2 mitophagy (ortholog); regulation of protein stability (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; mitochondrial autophagy pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Developmental Disabilities (ortholog); Dwarfism (ortholog); FOUND IN mitochondrial outer membrane translocase complex (ortholog); mitochondrion (ortholog) NW_004955410 25157860 25166898 - 102009473 AGCD01011144;GBCB01006439;XM_005377383 XP_005377440 MODEL 8747218 protein-coding Fkbp4 FKBP prolyl isomerase 4 ENCODES a protein that exhibits ATP binding (ortholog); copper-dependent protein binding (ortholog); GTP binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); copper ion transport (ortholog); embryo implantation (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH androgen insensitivity syndrome (ortholog); FOUND IN axonal growth cone (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955429 18334939 18344530 + 102021997 AGCD01028899;AGCD01028900;GBDF01005695;XM_005387116 XP_005387173 MODEL 8882215 pseudo LOC102021449 pyrethroid hydrolase Ces2e-like NW_004955484 9684942 9693526 - 102021449 AGCD01058425 MODEL 8910470 protein-coding Skp2 S-phase kinase associated protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cellular response to cell-matrix adhesion (ortholog); defense response to virus (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN Notch signaling pathway; p53 signaling pathway; ASSOCIATED WITH Brain Injuries (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955426 20972663 20999769 + 102011338 AGCD01026576;GBDF01112275;XM_005386206;XM_005386207 XP_005386263;XP_005386264 MODEL 8858830 protein-coding LOC102018858 olfactory receptor 2A5-like NW_004955537 2612449 2613549 - 102018858 AGCD01070933;XM_005410627 XP_005410684 MODEL 9020721 pseudo LOC102010667 60S acidic ribosomal protein P2 pseudogene NW_004955453 8336273 8336716 - 102010667 AGCD01044760;XM_005395716 MODEL 8700901 protein-coding LOC102003877 chromosome unknown open reading frame, human C16orf47 NW_004955484 5772487 5791070 - 102003877 AGCD01058271;XM_005415398 XP_005415455 MODEL 8775032 protein-coding Rab3il1 RAB3A interacting protein like 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); melanoma (ortholog) NW_004955511 5797528 5810692 + 102006805 AGCD01066585;AGCD01066586;GBDF01005308;XM_005408129;XM_005408130;XM_013506427;XM_013506428;XM_013506429 XP_005408186;XP_005408187;XP_013361881;XP_013361882;XP_013361883 MODEL 8989915 protein-coding Tdg thymine DNA glycosylase ENCODES a protein that exhibits ATP binding (ortholog); chloride ion binding (ortholog); DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); epigenetic regulation of gene expression (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); PML body (ortholog) NW_004955405 38661687 38680138 + 102008375 AGCD01005482;AGCD01005483;GBCE01187647;XM_005374580 XP_005374637 MODEL 39132952 misc_rna Y_RNA Y RNA 8923009 protein-coding Syndig1l synapse differentiation inducing 1 like ASSOCIATED WITH colorectal cancer (ortholog); stomach cancer (ortholog); FOUND IN Golgi apparatus (ortholog) NW_004955523 1092463 1095567 + 102019311 AGCD01068499;XM_005409395 XP_005409452 MODEL 8902760 pseudo LOC102003569 40S ribosomal protein S20 pseudogene NW_004955429 19247140 19249410 + 102003569 AGCD01028938 MODEL 39131313 protein-coding CYFIP1 cytoplasmic FMR1 interacting protein 1 8865535 protein-coding LOC102007955 olfactory receptor 2H1-like NW_004955583 61165 64037 + 102007955 AGCD01075793;GBDK01227600;XM_005414286 XP_005414343 MODEL 8903112 pseudo LOC102020329 proteasome subunit alpha type-6 pseudogene NW_004955472 12332579 12333266 - 102020329 AGCD01053795 MODEL 8909523 protein-coding Glt8d2 glycosyltransferase 8 domain containing 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog) NW_004955405 38680302 38708383 - 102008689 AGCD01005483;GBBH01076269;XM_005374581;XM_005374583;XM_013518849;XM_013518856;XM_013518857;XM_013518860;XM_013518862;XM_013518864 XP_005374638;XP_005374640;XP_013374303;XP_013374310;XP_013374311;XP_013374314;XP_013374316;XP_013374318 MODEL 9066615 ncrna LOC102019286 uncharacterized LOC102019286 NW_004955494 7882189 7889175 + 102019286 AGCD01061558;GBDF01308021;XR_264121 MODEL 8899859 protein-coding Dnah5 dynein axonemal heavy chain 5 ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); cilium movement (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); asthma (ortholog); autism spectrum disorder (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axonemal dynein complex (ortholog) NW_004955426 3105631 3406587 - 102007676 AGCD01026065;AGCD01026066;AGCD01026067;AGCD01026068;AGCD01026069;AGCD01026070;AGCD01026071;AGCD01026072;AGCD01026073;AGCD01026074;AGCD01026075;AGCD01026076;AGCD01026077;AGCD01026078;AGCD01026079;AGCD01026080;GBDI01083953;XM_005386122;XM_013514981 XP_005386179;XP_013370435 MODEL 8957734 protein-coding Ttc23 tetratricopeptide repeat domain 23 INVOLVED IN positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cilium (ortholog) NW_004955416 26583219 26664519 - 102030420 AGCD01017599;AGCD01017600;GBCB01058906;XM_005381620;XM_005381621;XM_005381622;XM_005381623;XM_005381625;XM_005381626;XM_013512540;XM_013512541 XP_005381677;XP_005381678;XP_005381679;XP_005381680;XP_005381682;XP_005381683;XP_013367994;XP_013367995 MODEL 8725278 protein-coding Kif21b kinesin family member 21B INVOLVED IN brain development (ortholog); corpus callosum development (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); brain ischemia (ortholog); cervical cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic endosome (ortholog) NW_004955406 37139168 37187543 - 102008285 AGCD01006571;GBDF01161913;XM_005375156;XM_005375158;XM_013522093;XR_001236847;XR_001236848;XR_001236849;XR_001236851;XR_001236852 XP_005375213;XP_005375215;XP_013377547 MODEL 8821333 protein-coding Snap91 synaptosome associated protein 91 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); clathrin binding (ortholog); clathrin heavy chain binding (ortholog); INVOLVED IN axonogenesis (ortholog); chemical synaptic transmission (ortholog); clathrin coat assembly (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Alzheimer's disease (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axon terminus (ortholog); clathrin-coated vesicle (ortholog); cytosol (ortholog) NW_004955411 11175587 11301145 - 102014541 AGCD01011808;AGCD01011809;AGCD01011810;AGCD01011811;AGCD01011812;AGCD01011813;GBBH01023636;XM_005377690;XM_005377691;XM_013510912;XM_013510914;XM_013510915;XM_013510916;XM_013510917;XM_013510918 XP_005377747;XP_005377748;XP_013366366;XP_013366368;XP_013366369;XP_013366370;XP_013366371;XP_013366372 MODEL 8805165 protein-coding Sash1 SAM and SH3 domain containing 1 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell migration (ortholog); positive regulation of lipopolysaccharide-mediated signaling pathway (ortholog); ASSOCIATED WITH alopecia (ortholog); Breast Cancer, Familial (ortholog); Cancer, Alopecia, Pigment Dyscrasia, Onychodystrophy, and Keratoderma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955439 12551361 12729500 - 102016200 AGCD01035939;AGCD01035940;AGCD01035941;AGCD01035942;AGCD01035943;AGCD01035944;AGCD01035945;GBCE01076514;GBDI01179673;XM_013517361 XP_013372815 MODEL 8861227 pseudo LOC102025363 uracil-DNA glycosylase pseudogene NW_004955484 7703130 7704292 - 102025363 AGCD01058343;AGCD01058344 MODEL 8743006 pseudo LOC102016129 E3 ubiquitin-protein ligase RBX1 pseudogene NW_004955454 2567323 2567736 - 102016129 AGCD01045023;XM_005395821 MODEL 8726769 protein-coding LOC102013037 solute carrier organic anion transporter family member 5A1-like NW_004955655 54988 70910 - 102013037 AGCD01077842;GBCB01004342;GBDF01097203;XM_013510175 XP_013365629 MODEL 39132953 misc_rna Y_RNA Y RNA 39132926 snrna U5 U5 spliceosomal RNA 8796345 protein-coding LOC102018052 uncharacterized LOC102018052 NW_004955451 16436871 16438274 - 102018052 AGCD01043676;XM_013519142 XP_013374596 MODEL 8807388 protein-coding LOC102009447 vomeronasal type-1 receptor 4-like NW_004955603 356667 357605 - 102009447 AGCD01076839;XM_005414843 XP_005414900 MODEL 39133051 snrna U6 U6 spliceosomal RNA 10063772 protein-coding LOC106147361 translation initiation factor IF-2-like NW_004955547 562109 564352 + 106147361 AGCD01072163;XM_013508441 XP_013363895 MODEL 39132813 snrna U6 U6 spliceosomal RNA 39131933 snrna U1 U1 spliceosomal RNA 9014307 pseudo LOC102012678 60S ribosomal protein L26 pseudogene NW_004955523 522319 523767 - 102012678 AGCD01068463 MODEL 9045262 protein-coding Lsr lipolysis stimulated lipoprotein receptor INVOLVED IN epithelial structure maintenance (ortholog); establishment of blood-brain barrier (ortholog); establishment of skin barrier (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); carcinoma (ortholog); FOUND IN cell junction (ortholog); plasma membrane (ortholog); tight junction (ortholog) NW_004955468 4548774 4563341 + 102014228 AGCD01051916;GBBH01063442;XM_005400034;XM_005400035;XM_005400036;XM_005400037;XM_005400038;XM_005400039 XP_005400091;XP_005400092;XP_005400093;XP_005400094;XP_005400095;XP_005400096 MODEL 39132332 snrna U6 U6 spliceosomal RNA 8872115 protein-coding Gypc glycophorin C (Gerbich blood group) ASSOCIATED WITH atrial fibrillation (ortholog); malaria (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cortical cytoskeleton (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955459 3748272 3754402 - 102011092 AGCD01048018;GBCQ01035547;XM_013521037 XP_013376491 MODEL 8937609 protein-coding Cyfip2 cytoplasmic FMR1 interacting protein 2 INVOLVED IN apoptotic process (ortholog); cell-cell adhesion (ortholog); dendrite extension (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955408 11483891 11586628 + 102014747 AGCD01008311;AGCD01008312;GBBH01150816;XM_013508767;XM_013508777 XP_013364221;XP_013364231 MODEL 8966312 protein-coding Scrg1 stimulator of chondrogenesis 1 INVOLVED IN mesenchymal stem cell proliferation (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); neuron projection terminus (ortholog) NW_004955403 33599197 33626095 + 102025072 AGCD01002457;GBDI01141301;XM_005373540 XP_005373597 MODEL 8936288 ncrna LOC102014209 uncharacterized LOC102014209 NW_004955406 20144960 20150756 - 102014209 AGCD01006099;AGCD01006100;GBDI01275825;XR_001236593 MODEL 8979663 protein-coding Brca1 BRCA1 DNA repair associated ENCODES a protein that exhibits chromatin binding (ortholog); damaged DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to indole-3-methanol (ortholog); cellular response to ionizing radiation (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; forkhead class A signaling pathway; homologous recombination pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN BRCA1-A complex (ortholog); BRCA1-B complex (ortholog); BRCA1-BARD1 complex (ortholog) NW_004955451 16819463 16870780 - 102029928 AGCD01043709;AGCD01043710;AGCD01043711;GBDF01225401;GBDF01304989;JN414194;XM_005394496;XM_013519228;XM_013519229;XM_013519230;XM_013519231;XR_001235969 AEP18221;XP_005394553;XP_013374682;XP_013374683;XP_013374684;XP_013374685 MODEL 39131388 protein-coding LBHD2 LBH domain containing 2 9008080 protein-coding Syne1 spectrin repeat containing nuclear envelope protein 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); cytoskeleton-nuclear membrane anchor activity (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); centrosome localization (ortholog); Golgi organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arthrogryposis multiplex congenita (ortholog); arthrogryposis multiplex congenita-3 (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); dendritic spine head (ortholog) NW_004955439 9131227 9574112 + 102022331 AGCD01035827;AGCD01035828;AGCD01035829;AGCD01035830;AGCD01035831;AGCD01035832;AGCD01035833;AGCD01035834;AGCD01035835;AGCD01035836;AGCD01035837;AGCD01035838;AGCD01035839;AGCD01035840;GBDF01025112;GBDK01044848;XM_013517312;XM_013517313;XM_013517314 XP_013372766;XP_013372767;XP_013372768 MODEL 9016445 protein-coding F2 coagulation factor II, thrombin ENCODES a protein that exhibits endopeptidase activity (ortholog); heparin binding (ortholog); lipopolysaccharide binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); blood coagulation, common pathway (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acquired angioedema (ortholog); Acute Coronary Syndrome (ortholog); Acute Lung Injury (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955422 1356675 1367788 - 102003453 AGCD01022456;GBDI01106150;XM_005384007 XP_005384064 MODEL 9038293 protein-coding Snapc1 small nuclear RNA activating complex polypeptide 1 PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); snRNA-activating protein complex (ortholog) NW_004955466 7953559 7979083 - 102011520 AGCD01050974;AGCD01050975;GBCE01127294;XM_005399162 XP_005399219 MODEL 8771680 protein-coding Tas2r38 taste 2 receptor member 38 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Thiourea Tasting (ortholog); FOUND IN plasma membrane (ortholog) NW_004955494 1659692 1662712 + 102005055 AGCD01061419;XM_013505004 XP_013360458 MODEL 8916892 protein-coding Nsl1 NSL1 component of MIS12 kinetochore complex ASSOCIATED WITH acute myeloid leukemia (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN kinetochore (ortholog); MIS12/MIND type complex (ortholog); nuclear speck (ortholog) NW_004955406 4764439 4798499 + 102020080 AGCD01005704;AGCD01005705;AGCD01005706;GBCE01065089;XM_005374740 XP_005374797 MODEL 8844642 pseudo LOC102003880 transcription initiation factor TFIID subunit 7-like pseudogene NW_004955488 7941790 7996454 + 102003880 AGCD01059698;XM_005404481 MODEL 8972709 protein-coding Slit1 slit guidance ligand 1 ENCODES a protein that exhibits heparan sulfate proteoglycan binding (ortholog); Roundabout binding (ortholog); INVOLVED IN axon extension involved in axon guidance (ortholog); axon guidance (ortholog); axonogenesis (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN extracellular region (ortholog); non-collagenous component of interstitial matrix (ortholog) NW_004955507 3204135 3365319 - 102022625 AGCD01065614;AGCD01065615;AGCD01065616;AGCD01065617;AGCD01065618;AGCD01065619;GBCB01111715;XM_005407596 XP_005407653 MODEL 9038031 protein-coding LOC102004626 olfactory receptor 5B2-like NW_004955511 3096845 3097774 - 102004626 AGCD01066442;XM_013506380 XP_013361834 MODEL 8766282 protein-coding Il6 interleukin 6 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); histone H3K9ac reader activity (ortholog); INVOLVED IN autocrine signaling (ortholog); bone remodeling (ortholog); branching involved in salivary gland morphogenesis (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; interleukin-27 signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH otitis media; Acute Coronary Syndrome (ortholog); Acute Hepatitis (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); interleukin-6 receptor complex (ortholog) NW_004955410 25079835 25084390 + 102009154 AGCD01011140;GBDF01056731;XM_005377381 XP_005377438 MODEL 39132666 snrna U6 U6 spliceosomal RNA 8937783 protein-coding Gdpd2 glycerophosphodiester phosphodiesterase domain containing 2 ENCODES a protein that exhibits C-type glycerophospholipase activity (ortholog); glycerophosphoinositol inositolphosphodiesterase activity (ortholog); GPI anchor phospholipase C activity (ortholog); INVOLVED IN actin filament organization (ortholog); negative regulation of cell-matrix adhesion (ortholog); negative regulation of extracellular matrix disassembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN actin filament (ortholog); lamellipodium (ortholog); plasma membrane (ortholog) NW_004955475 9972797 9983145 + 102023802 AGCD01055079;GBBH01062185;XM_005401622;XM_005401623;XM_005401625;XM_005401626;XM_013502885 XP_005401679;XP_005401680;XP_005401682;XP_005401683;XP_013358339 MODEL 8958449 protein-coding LOC102009864 olfactory receptor 4D11-like NW_004955511 3981204 3982139 + 102009864 AGCD01066484;XM_005408268 XP_005408325 MODEL 8991955 protein-coding Slc25a33 solute carrier family 25 member 33 ENCODES a protein that exhibits pyrimidine nucleotide transmembrane transporter activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to insulin-like growth factor stimulus (ortholog); mitochondria-nucleus signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955486 3905001 3921501 - 102022298 AGCD01059044;GBBH01118527;GBCB01072973;XM_013504167 XP_013359621 MODEL 8996352 pseudo LOC102005336 60S ribosomal protein L12-like NW_004955406 7460294 7460841 + 102005336 AGCD01005771 MODEL 8896000 protein-coding Lman2 lectin, mannose binding 2 ENCODES a protein that exhibits carbohydrate binding (ortholog); D-mannose binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN positive regulation of phagocytosis (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cell surface (ortholog); COPI-coated vesicle (ortholog); cytoplasmic vesicle (ortholog) NW_004955408 29581737 29597240 - 102023778 AGCD01008764;AGCD01008765;GBDI01019724;XM_005376426 XP_005376483 MODEL 8823344 protein-coding Sla Src like adaptor PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); vitiligo (ortholog) NW_004955461 7622501 7643008 - 102014427 AGCD01048921;GBDI01326913;XM_005398022 XP_005398079 MODEL 9035780 ncrna LOC102025365 uncharacterized LOC102025365 NW_004955488 5333649 5334649 + 102025365 AGCD01059618;GBDF01159254;XR_263999 MODEL 8711700 protein-coding LOC102023200 transcription elongation factor A protein-like 5 NW_004955548 416862 420750 - 102023200 AGCD01072331;GBCE01005297;XM_005411979;XM_005411980 XP_005412036;XP_005412037 MODEL 8910507 protein-coding Sash3 SAM and SH3 domain containing 3 INVOLVED IN homeostasis of number of cells within a tissue (ortholog); positive regulation of adaptive immune response (ortholog); positive regulation of B cell proliferation (ortholog); ASSOCIATED WITH asthma (ortholog); Brain Abscess (ortholog); Cafe au lait Spots, Multiple (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955473 5224635 5237066 - 102012856 AGCD01053973;GBBH01090094;XM_005401258 XP_005401315 MODEL 8722175 protein-coding Rab3ip RAB3A interacting protein ENCODES a protein that exhibits GTPase binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); negative regulation of filopodium assembly (ortholog); protein targeting to membrane (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955405 10031333 10091438 + 102025971 AGCD01004802;AGCD01004803;AGCD01004804;AGCD01004805;AGCD01004806;AGCD01004807;GBBH01082375;GBDF01009098;XM_013517540 XP_013372994 MODEL 8907252 protein-coding Dynlt5 dynein light chain Tctex-type family member 5 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog) NW_004955423 24125928 24148629 - 102019407 AGCD01024031;GBDF01135150;XM_005385289 XP_005385346 MODEL 8974772 ncrna LOC102013039 uncharacterized LOC102013039 NW_004955403 57271566 57272877 + 102013039 AGCD01003149;GBCB01111792;XR_259280 MODEL 8765999 pseudo LOC102022167 olfactory receptor 6C6-like NW_004955458 2820776 2842036 + 102022167 AGCD01047245;AGCD01047246;AGCD01047247;AGCD01047248;AGCD01047249 MODEL 8792067 protein-coding Yae1 YAE1 maturation factor of ABCE1 INVOLVED IN protein maturation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955460 3900245 3904430 - 102018809 AGCD01048422;GBDF01046538;XM_005397731;XM_005397732;XM_013521094 XP_005397788;XP_005397789;XP_013376548 MODEL 9013243 pseudo LOC102007959 fatty acyl-CoA reductase 1-like NW_004955402 53525237 53526901 - 102007959 AGCD01001369 MODEL 9024305 ncrna LOC102020333 uncharacterized LOC102020333 NW_004955476 9010691 9023839 + 102020333 AGCD01055377;GBDF01053841;XR_001230806 MODEL 8830066 pseudo LOC102021450 40S ribosomal protein S24 pseudogene NW_004955420 610075 610467 - 102021450 AGCD01020550 MODEL 8992638 ncrna LOC102018860 uncharacterized LOC102018860 NW_004955439 13825758 13882758 + 102018860 AGCD01035968;GBDF01154382;XR_001235173 MODEL 8883413 protein-coding Fkbp5 FKBP prolyl isomerase 5 ENCODES a protein that exhibits heat shock protein binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); protein folding (ortholog); response to alcohol (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955437 3445515 3548874 - 102029005 AGCD01034318;AGCD01034319;AGCD01034320;AGCD01034321;GBDI01261071;XM_005389562;XM_013516903;XM_013516904 XP_005389619;XP_013372357;XP_013372358 MODEL 8851907 protein-coding Nsmaf neutral sphingomyelinase activation associated factor ENCODES a protein that exhibits sphingomyelin phosphodiesterase activator activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); tumor necrosis factor-mediated signaling pathway (ortholog); PARTICIPATES IN ceramide signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955454 17113817 17162900 - 102016888 AGCD01045545;AGCD01045546;AGCD01045547;GBCQ01151799;GBDI01170604;XM_013520109 XP_013375563 MODEL 39132333 snrna U6 U6 spliceosomal RNA 8824120 ncrna LOC102012680 uncharacterized LOC102012680 NW_004955435 7947806 7951442 - 102012680 AGCD01032982;GBDF01049854;XR_001234875;XR_001234876;XR_001234877 MODEL 8740232 protein-coding Slit2 slit guidance ligand 2 ENCODES a protein that exhibits chemorepellent activity (ortholog); GTPase inhibitor activity (ortholog); heparan sulfate proteoglycan binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); apoptotic process involved in luteolysis (ortholog); axon extension involved in axon guidance (ortholog); PARTICIPATES IN glypican signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); anti-basement membrane glomerulonephritis (ortholog); atrial fibrillation (ortholog); FOUND IN axon (ortholog); cell body (ortholog); cell projection (ortholog) NW_004955480 3982977 4314160 - 102030421 AGCD01056633;AGCD01056634;AGCD01056635;AGCD01056636;GBCE01001769;XM_005402476;XM_005402478;XM_005402479;XM_013503310 XP_005402533;XP_005402535;XP_005402536;XP_013358764 MODEL 8903774 protein-coding Ttc23l tetratricopeptide repeat domain 23 like ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN midbody (ortholog) NW_004955426 19985179 20029902 + 102030550 AGCD01026560;GBDJ01376678;XM_005386177;XM_005386178;XM_005386181;XM_013514964;XM_013514965;XM_013514966;XM_013514967;XM_013514968;XR_001234319 XP_005386234;XP_005386235;XP_005386238;XP_013370418;XP_013370419;XP_013370420;XP_013370421;XP_013370422 MODEL 8819711 protein-coding LOC102019287 olfactory receptor 7E24-like NW_004955495 533469 599025 - 102019287 AGCD01061635;AGCD01061636;AGCD01061637;AGCD01061638;AGCD01061639;AGCD01061640;AGCD01061641;AGCD01061642;GBDF01039324;XM_005405558 XP_005405615 MODEL 8752712 protein-coding Gys1 glycogen synthase 1 ENCODES a protein that exhibits alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (ortholog); D-glucose binding (ortholog); glycogen synthase activity, transferring glucose-1-phosphate (ortholog); INVOLVED IN glycogen biosynthetic process (ortholog); glycogen metabolic process (ortholog); heart development (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cardiovascular system disease (ortholog); cervical cancer (ortholog); FOUND IN catalytic complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955559 1674969 1690098 + 102026808 AGCD01073659;GBDF01248535;XM_005412917 XP_005412974 MODEL 8930660 protein-coding LOC102016130 histone H2A.V ENCODES a protein that exhibits molecular adaptor activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN nucleosome (ortholog); nucleus (ortholog) NW_004955456 7364329 7374786 + 102016130 AGCD01046412;AGCD01046413;GBDF01008221;XM_005396652 XP_005396709 MODEL 8940786 protein-coding Tdo2 tryptophan 2,3-dioxygenase ENCODES a protein that exhibits amino acid binding (ortholog); heme binding (ortholog); identical protein binding (ortholog); INVOLVED IN L-tryptophan catabolic process (ortholog); protein homotetramerization (ortholog); response to cortisol (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH alcohol withdrawal syndrome (ortholog); Alzheimer's disease (ortholog); autistic disorder (ortholog); FOUND IN cytosol (ortholog) NW_004955471 11229795 11245255 - 102013818 AGCD01053251;GBCQ01088498;XM_005400948 XP_005401005 MODEL 8906986 protein-coding Kif22 kinesin family member 22 INVOLVED IN metaphase chromosome alignment (ortholog); mitotic metaphase chromosome alignment (ortholog); sister chromatid cohesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); mitotic spindle (ortholog); nuclear speck (ortholog) NW_004955493 7155307 7173576 - 102008119 AGCD01061157;GBDJ01025840;XM_013504774 XP_013360228 MODEL 8859908 ncrna LOC102003575 uncharacterized LOC102003575 NW_004955433 12281187 12287342 + 102003575 AGCD01031661;XR_001234717;XR_261586 MODEL 8878298 protein-coding Cygb cytoglobin ENCODES a protein that exhibits carbon monoxide binding (ortholog); catalase activity (ortholog); fatty acid peroxidase activity (ortholog); INVOLVED IN fatty acid oxidation (ortholog); negative regulation of collagen biosynthetic process (ortholog); negative regulation of fibroblast migration (ortholog); ASSOCIATED WITH chronic pancreatitis (ortholog); Experimental Liver Cirrhosis (ortholog); extrahepatic cholestasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuron projection (ortholog) NW_004955506 5766006 5775722 + 102023381 AGCD01065387;GBBH01228785;XM_005407427;XM_013506123;XM_013506124 XP_005407484;XP_013361577;XP_013361578 MODEL 9007700 protein-coding Tgoln2 trans-golgi network protein 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN endosome (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955424 2122410 2131734 - 102006477 AGCD01024263;GBCQ01005356;XM_013514587 XP_013370041 MODEL 9011473 pseudo LOC102025367 polyprenol reductase-like NW_004955490 2653858 2656890 + 102025367 AGCD01060146 MODEL 8809088 pseudo LOC102009451 archaemetzincin-2-like NW_004955403 30870358 30871472 + 102009451 AGCD01002408 MODEL 8880456 protein-coding Rab40b RAB40B, member RAS oncogene family ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cellular detoxification (ortholog); negative regulation of actin filament bundle assembly (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog); lamellipodium membrane (ortholog) NW_004955506 480236 509038 + 102006261 AGCD01065228;AGCD01065229;AGCD01065230;GBDI01219730;XM_005407186 XP_005407243 MODEL 8741608 protein-coding Tomm70 translocase of outer mitochondrial membrane 70 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN activation of innate immune response (ortholog); alpha helical protein insertion into mitochondrial outer membrane (ortholog); cellular response to virus (ortholog); PARTICIPATES IN alpha-helical insertion pathway of mitochondrial protein import; beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955427 1874277 1908245 - 102014589 AGCD01026884;GBCE01075536;XM_013515046 XP_013370500 MODEL 8827863 protein-coding LOC102003881 olfactory receptor-like protein OLF3 NW_004955491 257421 258371 + 102003881 AGCD01060325;XM_005404721 XP_005404778 MODEL 8810656 protein-coding Snapc2 small nuclear RNA activating complex polypeptide 2 PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); snRNA-activating protein complex (ortholog) NW_004955563 1345100 1347593 - 102018780 AGCD01074142;GBCE01033036;XM_005413140;XM_005413141;XM_005413142 XP_005413197;XP_005413198;XP_005413199 MODEL 8957408 protein-coding Gltp glycolipid transfer protein ENCODES a protein that exhibits glycolipid binding (ortholog); glycolipid transfer activity (ortholog); identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); intermembrane lipid transfer (ortholog); regulation of glucosylceramide biosynthetic process (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytosol (ortholog) NW_004955455 8713152 8735320 + 102018259 AGCD01045908;GBDF01222011;XM_005396445 XP_005396502 MODEL 8809822 pseudo LOC102010670 ADP-ribosylation factor-like protein 8B pseudogene NW_004955455 5770199 5771659 - 102010670 AGCD01045751 MODEL 8960428 protein-coding Dnah6 dynein axonemal heavy chain 6 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN sperm flagellum (ortholog) NW_004955424 2575333 2788742 - 102008433 AGCD01024293;AGCD01024294;AGCD01024295;AGCD01024296;AGCD01024297;GBDJ01350396;XM_005385447 XP_005385504 MODEL 8763230 protein-coding Lss lanosterol synthase ENCODES a protein that exhibits lanosterol synthase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); regulation of protein stability (ortholog); steroid biosynthetic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia-mental retardation syndrome 4 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955407 42633658 42653399 - 102024648 AGCD01007894;GBDF01088470;XM_013505726 XP_013361180 MODEL 9042703 ncrna LOC102023207 uncharacterized LOC102023207 NW_004955444 15292822 15398299 - 102023207 AGCD01039134;AGCD01039135;AGCD01039136;XR_262273 MODEL 8871697 protein-coding Scrib scribble planar cell polarity protein ENCODES a protein that exhibits signaling adaptor activity (ortholog); INVOLVED IN apoptotic process involved in morphogenesis (ortholog); astrocyte cell migration (ortholog); auditory receptor cell morphogenesis (ortholog); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN adherens junction (ortholog); anchoring junction (ortholog); basolateral plasma membrane (ortholog) NW_004955454 2461526 2482734 - 102023554 AGCD01045021;AGCD01045022;GBBH01187694;GBCQ01067678;XM_013520053 XP_013375507 MODEL 8725192 protein-coding Ttc24 tetratricopeptide repeat domain 24 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955545 2670629 2679093 + 102003907 AGCD01071915;GBBH01143366;XM_005415343;XM_013508312;XM_013508313;XM_013508314;XM_013508315;XM_013508316;XM_013508317;XM_013508318;XM_013508319;XM_013508320 XP_005415400;XP_013363766;XP_013363767;XP_013363768;XP_013363769;XP_013363770;XP_013363771;XP_013363772;XP_013363773;XP_013363774 MODEL 39131934 snrna U1 U1 spliceosomal RNA 8734358 pseudo LOC102014211 28S ribosomal protein S36, mitochondrial pseudogene NW_004955407 3015541 3015967 + 102014211 AGCD01006848 MODEL 39133052 snrna U6 U6 spliceosomal RNA 39132815 snrna U6 U6 spliceosomal RNA 8951047 protein-coding Sla2 Src like adaptor 2 ENCODES a protein that exhibits signaling adaptor activity (ortholog); INVOLVED IN negative regulation of calcium-mediated signaling (ortholog); negative regulation of T cell receptor signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); late endosome (ortholog); plasma membrane (ortholog) NW_004955422 24978447 25003732 + 102022398 AGCD01023239;GBDI01326113;XM_005384738;XM_005384739 XP_005384795;XP_005384796 MODEL 8999503 protein-coding Brca2 BRCA2 DNA repair associated ENCODES a protein that exhibits double-stranded DNA binding (ortholog); gamma-tubulin binding (ortholog); histone acetyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); cell population proliferation (ortholog); cellular response to ionizing radiation (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN BRCA2-MAGE-D1 complex (ortholog); centrosome (ortholog); chromosome (ortholog) NW_004955431 13449287 13526878 - 102011896 AGCD01030308;GBCB01111140;JN414336;XM_005387715;XM_005387716;XM_005387717;XM_005387718;XM_005387719;XM_005387720;XM_013515889;XM_013515890 AEP18373;XP_005387772;XP_005387773;XP_005387774;XP_005387775;XP_005387776;XP_005387777;XP_013371343;XP_013371344 MODEL 8715297 pseudo LOC102004631 quinone oxidoreductase-like protein 2 NW_004955432 19214738 19226859 - 102004631 AGCD01031171;AGCD01031172;AGCD01031173;AGCD01031174 MODEL 8717066 protein-coding Kif23 kinesin family member 23 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN mitotic cytokinesis (ortholog); mitotic spindle midzone assembly (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centralspindlin complex (ortholog); centrosome (ortholog); Flemming body (ortholog) NW_004955450 7060240 7083818 - 102004769 AGCD01042531;AGCD01042532;GBDF01086111;XM_005393877;XM_013519019;XM_013519020;XM_013519021 XP_005393934;XP_013374473;XP_013374474;XP_013374475 MODEL 39132667 snrna U6 U6 spliceosomal RNA 9065642 pseudo LOC102009452 serine/arginine repetitive matrix protein 1 pseudogene NW_004955451 7812936 7823923 - 102009452 AGCD01043254 MODEL 8936844 ncrna LOC102005337 uncharacterized LOC102005337 NW_004955406 13632067 13716155 - 102005337 AGCD01005948;AGCD01005949;GBDF01163324;XR_001236425;XR_001236426;XR_001236427 MODEL 8982690 protein-coding Rab40c RAB40C, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cell migration (ortholog); lipid droplet formation (ortholog); negative regulation of focal adhesion assembly (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); epilepsy (ortholog); esophageal cancer (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955442 16577843 16614132 - 102024512 AGCD01037901;AGCD01037902;AGCD01037903;GBCE01155373;GBCQ01129291;XM_005391634 XP_005391691 MODEL 8870437 pseudo LOC102012683 cyclin-dependent kinase 1-like NW_004955530 1703354 1747813 + 102012683 AGCD01069897;AGCD01069898;AGCD01069899 MODEL 39133660 snrna U5 U5 spliceosomal RNA 8895838 protein-coding Lman2l lectin, mannose binding 2 like INVOLVED IN protein transport (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 69 (ortholog); autosomal recessive intellectual developmental disorder 52 (ortholog); bipolar disorder (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955470 4080723 4100662 - 102019161 AGCD01052717;AGCD01052718;GBDF01157284;XM_005400667;XM_005400668 XP_005400724;XP_005400725 MODEL 8772336 pseudo LOC102018054 60S ribosomal protein L38 pseudogene NW_004955405 18308689 18309581 + 102018054 AGCD01005015 MODEL 8862933 protein-coding Syne2 spectrin repeat containing nuclear envelope protein 2 ENCODES a protein that exhibits actin binding (ortholog); cytoskeleton-nuclear membrane anchor activity (ortholog); INVOLVED IN centrosome localization (ortholog); establishment or maintenance of cell polarity (ortholog); fibroblast migration (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); atrial fibrillation (ortholog); FOUND IN cytoplasm (ortholog); filopodium membrane (ortholog); focal adhesion (ortholog) NW_004955466 5646516 5926382 - 102005241 AGCD01050885;AGCD01050886;AGCD01050887;AGCD01050888;AGCD01050889;AGCD01050890;AGCD01050891;AGCD01050892;AGCD01050893;AGCD01050894;AGCD01050895;AGCD01050896;AGCD01050897;GBDJ01010914;XM_005399141;XM_005399142;XM_005399143;XM_013521919;XM_013521920 XP_005399198;XP_005399199;XP_005399200;XP_013377373;XP_013377374 MODEL 10252601 protein-coding LOC106147362 translation initiation factor IF-2-like NW_004955547 564087 567929 + 106147362 AGCD01072163;AGCD01072164;GBCQ01047831;GBDK01282685;XM_013508442 XP_013363896 MODEL 8966216 protein-coding Gys2 glycogen synthase 2 ENCODES a protein that exhibits alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (ortholog); D-glucose binding (ortholog); INVOLVED IN glycogen biosynthetic process (ortholog); glycogen metabolic process (ortholog); response to glucose (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen biosynthetic pathway; glycogen metabolic pathway; ASSOCIATED WITH Acidoses (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN cell cortex (ortholog); cortical actin cytoskeleton (ortholog); cytoplasm (ortholog) NW_004955413 17182342 17240180 - 102018375 AGCD01014131;AGCD01014132;AGCD01014133;AGCD01014134;AGCD01014135;AGCD01014136;GBDF01253705;XM_005379062 XP_005379119 MODEL 8836431 pseudo LOC102022169 small ubiquitin-related modifier 2 pseudogene NW_004955460 13632113 13632539 + 102022169 AGCD01048710 MODEL 8918371 protein-coding Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A ENCODES a protein that exhibits actin binding (ortholog); cyclin binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); cardiac muscle hypertrophy (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); allergic disease (ortholog); allergic rhinitis (ortholog); FOUND IN actin filament (ortholog); axon (ortholog); cytoplasm (ortholog) NW_004955407 36456628 36588940 + 102015174 AGCD01007769;AGCD01007770;AGCD01007771;GBDF01046753;GBDK01234122;XM_005375747;XM_005375749;XM_005375750;XM_005375751;XM_013504724 XP_005375804;XP_005375806;XP_005375807;XP_005375808;XP_013360178 MODEL 8943084 protein-coding Gdpd3 glycerophosphodiester phosphodiesterase domain containing 3 ENCODES a protein that exhibits phosphatidylcholine lysophospholipase A1 activity (ortholog); phosphoric diester hydrolase activity (ortholog); INVOLVED IN N-acylethanolamine metabolic process (ortholog); phosphatidylcholine catabolic process (ortholog); phospholipid metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lipid storage disease (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955493 6876943 6883716 + 102021563 AGCD01061147;GBCE01188319;XM_005405185 XP_005405242 MODEL 8884673 protein-coding Tgs1 trimethylguanosine synthase 1 ENCODES a protein that exhibits RNA cap trimethylguanosine synthase activity (ortholog); INVOLVED IN 7-methylguanosine cap hypermethylation (ortholog); cellular response to fatty acid (ortholog); cellular response to glucose stimulus (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955454 14896085 14937678 + 102009799 AGCD01045479;GBDI01173633;GBDK01020865;XM_005396075 XP_005396132 MODEL 8708520 protein-coding Slain1 SLAIN family member 1 ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog) NW_004955404 29537497 29594617 - 102015594 AGCD01003978;AGCD01003979;GBBH01069566;GBDF01054223;XM_005374150;XM_005374151 XP_005374207;XP_005374208 MODEL 9042278 protein-coding Yaf2 YY1 associated factor 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); sarcoma (ortholog); thymoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955500 1531884 1626335 - 102029985 AGCD01063657;AGCD01063658;AGCD01063659;AGCD01063660;AGCD01063661;AGCD01063662;AGCD01063663;AGCD01063664;AGCD01063665;AGCD01063666;AGCD01063667;GBBH01107030;XM_005406575;XR_001231508;XR_001231509;XR_001231510;XR_001231511 XP_005406632 MODEL 8938102 pseudo LOC102007960 ubiquitin-conjugating enzyme E2 L3 pseudogene NW_004955403 1242593 1242983 + 102007960 AGCD01001717 MODEL 8949342 pseudo LOC102009866 U2 small nuclear ribonucleoprotein B'' pseudogene NW_004955512 1307791 1314557 + 102009866 AGCD01066638 MODEL 8860297 ncrna LOC102020334 uncharacterized LOC102020334 NW_004955478 1118663 1128148 + 102020334 AGCD01055756;GBCE01092361;XR_263684 MODEL 8878731 protein-coding LOC102010672 uncharacterized LOC102010672 NW_004955456 8615945 8618802 + 102010672 AGCD01046495;AGCD01046496;GBDJ01224884;XM_013520516 XP_013375970 MODEL 8921944 protein-coding Snapc3 small nuclear RNA activating complex polypeptide 3 PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); snRNA-activating protein complex (ortholog) NW_004955434 18275301 18310682 + 102017154 AGCD01032561;AGCD01032562;GBBH01208062;GBCE01115541;XM_013516308;XR_001234798 XP_013371762 MODEL 8815616 protein-coding Tonsl tonsoku like, DNA repair protein ENCODES a protein that exhibits histone binding (ortholog); histone reader activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); protein localization to chromatin (ortholog); replication fork processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); disease by infectious agent (ortholog); FOUND IN chromosome (ortholog); DNA replication factor A complex (ortholog); FACT complex (ortholog) NW_004955454 3054727 3067785 - 102006630 AGCD01045050;GBBH01121727;XM_005395889;XM_005395890;XM_013520284;XM_013520285 XP_005395946;XP_005395947;XP_013375738;XP_013375739 MODEL 8732812 protein-coding Lbr lamin B receptor ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); chromo shadow domain binding (ortholog); Delta14-sterol reductase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); neutrophil differentiation (ortholog); random inactivation of X chromosome (ortholog); PARTICIPATES IN cholesterol biosynthetic pathway; histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Anadysplasia-Like, Spontaneously Remitting Spondylometaphyseal Dysplasia (ortholog); asphyxiating thoracic dystrophy (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) NW_004955520 401733 418279 + 102006067 AGCD01068016;GBDF01125131;GBDF01125132;XM_013507049 XP_013362503 MODEL 39131415 protein-coding TAS2R38 taste 2 receptor member 38 9059370 ncrna LOC102016131 uncharacterized LOC102016131 NW_004955407 42491276 42493477 - 102016131 AGCD01007892;XR_259640;XR_259641 MODEL 8843136 protein-coding Lst1 leukocyte specific transcript 1 INVOLVED IN dendrite development (ortholog); negative regulation of lymphocyte proliferation (ortholog); ASSOCIATED WITH graft-versus-host disease (ortholog); Inflammation (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955437 127430 129835 + 102013647 AGCD01034102;GBDK01077421;XM_005389328;XM_013516930;XM_013516931 XP_005389385;XP_013372384;XP_013372385 MODEL 8966265 protein-coding Sass6 SAS-6 centriolar assembly protein INVOLVED IN centriole replication (ortholog); centrosome duplication (ortholog); positive regulation of centriole replication (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955435 4832284 4876077 - 102022223 AGCD01032855;AGCD01032856;AGCD01032857;AGCD01032858;AGCD01032859;AGCD01032860;GBDI01383796;GBDK01218416;XM_005389097 XP_005389154 MODEL 8725692 protein-coding Dnah7 dynein axonemal heavy chain 7 INVOLVED IN cilium movement (ortholog); inner dynein arm assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); bronchiectasis (ortholog); FOUND IN cilium (ortholog); inner dynein arm (ortholog); sperm annulus (ortholog) NW_004955403 4189887 4426405 + 102020073 AGCD01001780;AGCD01001781;AGCD01001782;AGCD01001783;AGCD01001784;AGCD01001785;AGCD01001786;GBBH01004459;XM_005373280;XR_001233192 XP_005373337 MODEL 8958003 pseudo LOC102013043 60S ribosomal protein L29 pseudogene NW_004955404 82336 85302 + 102013043 AGCD01003194 MODEL 8792615 protein-coding Cylc1 cylicin 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN acrosome assembly (ortholog); cell morphogenesis (ortholog); maintenance of cell number (ortholog); ASSOCIATED WITH lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN acrosomal matrix (ortholog); acrosomal membrane (ortholog); acrosomal vesicle (ortholog) NW_004955529 2996909 3052053 + 102020952 AGCD01069777;AGCD01069778;AGCD01069779;AGCD01069780;AGCD01069781;AGCD01069782;GBDF01089424;XM_005410077;XM_005410078 XP_005410134;XP_005410135 MODEL 8858068 protein-coding Il6r interleukin 6 receptor ENCODES a protein that exhibits ciliary neurotrophic factor binding (ortholog); ciliary neurotrophic factor receptor activity (ortholog); cytokine receptor activity (ortholog); INVOLVED IN autocrine signaling (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); Alzheimer's disease (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); ciliary neurotrophic factor receptor complex (ortholog) NW_004955545 932814 979359 + 102022428 AGCD01071826;AGCD01071827;AGCD01071828;AGCD01071829;AGCD01071830;GBBH01050791;XM_013508348;XM_013508349 XP_013363802;XP_013363803 MODEL 39131935 snrna U1 U1 spliceosomal RNA 8907411 pseudo LOC102025373 meteorin pseudogene NW_004955422 20231565 20233265 + 102025373 AGCD01023070 MODEL 8758570 protein-coding Ttc27 tetratricopeptide repeat domain 27 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955441 945619 1111973 + 102023299 AGCD01036743;AGCD01036744;AGCD01036745;AGCD01036746;AGCD01036747;GBDF01192444;XM_005390841 XP_005390898 MODEL 9039140 protein-coding Scrn1 secernin 1 INVOLVED IN regulation of synaptic vesicle cycle (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN nuclear membrane (ortholog); nucleus (ortholog); presynapse (ortholog) NW_004955410 31231418 31299772 - 102016990 AGCD01011318;AGCD01011319;AGCD01011320;AGCD01011321;GBDF01048678;GBDK01305177;XM_013510669 XP_013366123 MODEL 8731340 protein-coding LOC102003886 olfactory receptor 4X1-like NW_004955422 269162 270091 - 102003886 AGCD01022401;XM_005384932 XP_005384989 MODEL 8706093 ncrna LOC102018861 uncharacterized LOC102018861 NW_004955547 1458211 1476533 - 102018861 AGCD01072224;AGCD01072225;GBDJ01374207;XR_001232216 MODEL 39132334 snrna U6 U6 spliceosomal RNA 8793461 ncrna LOC102021452 uncharacterized LOC102021452 NW_004955420 19744171 19769843 + 102021452 AGCD01021066;GBDF01162139;XR_001233826;XR_260726 MODEL 8961613 protein-coding Brcc3 BRCA1/BRCA2-containing complex subunit 3 ENCODES a protein that exhibits enzyme regulator activity (ortholog); K63-linked deubiquitinase activity (ortholog); metal-dependent deubiquitinase activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); chromatin remodeling (ortholog); DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN BRCA1-A complex (ortholog); BRISC complex (ortholog); cytoplasm (ortholog) NW_004955594 551407 613772 - 102024964 AGCD01076434;AGCD01076435;GBCB01038463;XM_013509990;XM_013509991 XP_013365444;XP_013365445 MODEL 8788145 protein-coding Gltpd2 glycolipid transfer protein domain containing 2 ASSOCIATED WITH hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955467 10192527 10203765 + 102027505 AGCD01051551;AGCD01051552;AGCD01051553;GBCQ01072144;GBDI01293693;XM_013522215 XP_013377669 MODEL 8955374 pseudo LOC102019289 cysteine-rich protein 2-binding protein pseudogene NW_004955423 1306040 1307293 - 102019289 AGCD01023432 MODEL 9024009 ncrna LOC102009454 uncharacterized LOC102009454 NW_004955452 11752081 11769463 + 102009454 AGCD01044343;GBCB01079032;XR_262680 MODEL 8785220 protein-coding F2r coagulation factor II thrombin receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); G-protein alpha-subunit binding (ortholog); G-protein beta-subunit binding (ortholog); INVOLVED IN cell-cell junction maintenance (ortholog); connective tissue replacement involved in inflammatory response wound healing (ortholog); establishment of synaptic specificity at neuromuscular junction (ortholog); PARTICIPATES IN G protein mediated signaling pathway; protease mediated signaling via protease-activated receptor 1; ASSOCIATED WITH brain edema (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); early endosome (ortholog) NW_004955425 24144905 24164498 - 102020935 AGCD01025878;AGCD01025879;GBDI01187951;XM_005386038 XP_005386095 MODEL 8968574 protein-coding LOC102003578 telomerase protein component 1-like NW_004955433 39594 81672 + 102003578 AGCD01031301;XM_013516101 XP_013371555 MODEL 8996406 pseudo LOC102009870 deoxycytidine kinase-like NW_004955435 5992632 5993789 - 102009870 AGCD01032903 MODEL 9039618 protein-coding Tdp1 tyrosyl-DNA phosphodiesterase 1 ENCODES a protein that exhibits 3'-tyrosyl-DNA phosphodiesterase activity (ortholog); double-stranded DNA binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN DNA repair (ortholog); double-strand break repair (ortholog); single strand break repair (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955438 12421790 12510243 + 102011360 AGCD01035257;AGCD01035258;AGCD01035259;AGCD01035260;GBDF01127781;XM_005390276;XM_005390277;XM_005390278;XM_005390279 XP_005390333;XP_005390334;XP_005390335;XP_005390336 MODEL 8755918 protein-coding Fkbp6 FKBP prolyl isomerase family member 6 (inactive) ENCODES a protein that exhibits Hsp90 protein binding (ortholog); identical protein binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); piRNA processing (ortholog); positive regulation of viral genome replication (ortholog); ASSOCIATED WITH genetic disease (ortholog); male infertility (ortholog); spermatogenic failure 77 (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955456 14291445 14318310 - 102029366 AGCD01046638;AGCD01046639;GBDF01051299;XM_005396786 XP_005396843 MODEL 8996401 protein-coding LOC102009461 immunoglobulin omega chain-like NW_004955455 6648451 6649016 + 102009461 AGCD01045803;XM_005396575 XP_005396632 MODEL 8920668 protein-coding LOC102023216 uncharacterized LOC102023216 NW_004955403 17656915 17673294 - 102023216 AGCD01002084;GBDK01310107;XM_013514765 XP_013370219 MODEL 39132816 snrna U6 U6 spliceosomal RNA 39133053 snrna U6 U6 spliceosomal RNA 8759142 protein-coding Syne3 spectrin repeat containing nuclear envelope family member 3 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeleton-nuclear membrane anchor activity (ortholog); INVOLVED IN cytoskeleton organization (ortholog); establishment of protein localization to membrane (ortholog); regulation of cell shape (ortholog); PARTICIPATES IN Huntington's disease pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN meiotic nuclear membrane microtubule tethering complex (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) NW_004955438 17093612 17178177 + 102016311 AGCD01035430;AGCD01035431;AGCD01035432;AGCD01035433;GBDJ01239579;XM_005390377;XM_005390379;XM_013517207;XM_013517208;XM_013517209 XP_005390434;XP_005390436;XP_013372661;XP_013372662;XP_013372663 MODEL 8838056 protein-coding Slc25a34 solute carrier family 25 member 34 INVOLVED IN blastocyst hatching (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955527 2433577 2437348 - 102009872 AGCD01069436;GBDI01262999;XM_005409861;XM_005409862 XP_005409918;XP_005409919 MODEL 8911382 protein-coding Sat1 spermidine/spermine N1-acetyltransferase 1 ENCODES a protein that exhibits diamine N-acetyltransferase activity (ortholog); identical protein binding (ortholog); N-acetyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); polyamine biosynthetic process (ortholog); polyamine catabolic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; polyamine metabolic pathway; spermidine metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); anxiety disorder (ortholog) NW_004955509 4198876 4202103 + 102015032 AGCD01066057;AGCD01066058;AY533231;GBCE01002359;XM_005407833;XM_013506302 AAS59433;XP_005407890;XP_013361756 MODEL 9067359 protein-coding Nsmce1 NSE1 component of SMC5/6 complex ENCODES a protein that exhibits protein dimerization activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN chromosome, centromeric region (ortholog); mitotic spindle pole (ortholog); nucleoplasm (ortholog) NW_004955493 5468028 5498490 - 102006142 AGCD01061068;GBDJ01128693;XM_005405135;XM_013504878;XM_013504879 XP_005405192;XP_013360332;XP_013360333 MODEL 39132668 snrna U6 U6 spliceosomal RNA 8766323 protein-coding Slit3 slit guidance ligand 3 ENCODES a protein that exhibits Roundabout binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); aortic valve morphogenesis (ortholog); apoptotic process involved in luteolysis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Brain Injuries (ortholog); cervical cancer (ortholog); FOUND IN cell junction (ortholog); extracellular region (ortholog) NW_004955408 21719487 22322958 - 102012738 AGCD01008562;AGCD01008563;AGCD01008564;AGCD01008565;AGCD01008566;AGCD01008567;AGCD01008568;AGCD01008569;AGCD01008570;AGCD01008571;AGCD01008572;AGCD01008573;GBCE01095441;GBDJ01128089;XM_005376304;XM_013509145;XM_013509153 XP_005376361;XP_013364599;XP_013364607 MODEL 9037569 protein-coding Gdpd4 glycerophosphodiester phosphodiesterase domain containing 4 ENCODES a protein that exhibits GPI anchor phospholipase C activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955414 14471320 14564089 + 102010686 AGCD01015151;AGCD01015152;AGCD01015153;AGCD01015154;AGCD01015155;GBDF01002348;XM_005379839;XM_005379840 XP_005379896;XP_005379897 MODEL 8835217 protein-coding Th tyrosine hydroxylase ENCODES a protein that exhibits amino acid binding (ortholog); dopamine binding (ortholog); enzyme binding (ortholog); INVOLVED IN aminergic neurotransmitter loading into synaptic vesicle (ortholog); animal organ morphogenesis (ortholog); catecholamine biosynthetic process (ortholog); PARTICIPATES IN aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; dopamine biosynthetic pathway; ASSOCIATED WITH autosomal recessive Segawa syndrome (ortholog); Bietti crystalline corneoretinal dystrophy (ortholog); brain disease (ortholog); FOUND IN neuron projection terminus; perikaryon; axon (ortholog) NW_004955422 13943590 13951102 - 102006672 AGCD01022843;GBDF01056603;XM_005384197 XP_005384254 MODEL 39133303 snrna U5 U5 spliceosomal RNA 8702642 protein-coding Dyrk1b dual specificity tyrosine phosphorylation regulated kinase 1B ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN adipose tissue development (ortholog); myoblast fusion (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome 3 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955578 1187128 1195574 + 102022981 AGCD01075511;GBDF01008859;XM_005414085;XM_005414086;XM_005414087;XM_005414088;XM_005414089;XM_005414090 XP_005414142;XP_005414143;XP_005414144;XP_005414145;XP_005414146;XP_005414147 MODEL 8978721 protein-coding Brd1 bromodomain containing 1 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K5 acetyltransferase activity (ortholog); INVOLVED IN positive regulation of erythrocyte differentiation (ortholog); response to electrical stimulus (ortholog); response to immobilization stress (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); bipolar disorder (ortholog); FOUND IN chromosome (ortholog); dendrite (ortholog); histone H3-K14 acetyltransferase complex (ortholog) NW_004955413 32935827 32973820 - 102016580 AGCD01014652;GBDK01189055;XM_005379525;XM_005379526;XM_013511532 XP_005379582;XP_005379583;XP_013366986 MODEL 8916772 pseudo LOC102018056 deoxycytidine kinase pseudogene NW_004955452 6316449 6326634 - 102018056 AGCD01044102;AGCD01044103;AGCD01044104;AGCD01044105 MODEL 10092733 ncrna LOC106147363 uncharacterized LOC106147363 NW_004955547 1303216 1305339 - 106147363 AGCD01072208;GBDK01171259;XR_001232215 MODEL 8872874 protein-coding LOC102012689 keratin, type II cytoskeletal 73 NW_004955547 3011391 3021597 - 102012689 AGCD01072303;GBCB01047840;XM_005411952;XM_005411953 XP_005412009;XP_005412010 MODEL 8900249 ncrna LOC102016134 uncharacterized LOC102016134 NW_004955409 940711 943540 + 102016134 AGCD01009168;GBBH01012462;XR_259742 MODEL 9031652 pseudo LOC102004632 protein DBF4 homolog A pseudogene NW_004955520 4533977 4536441 + 102004632 AGCD01068120 MODEL 8901559 ncrna LOC102023217 uncharacterized LOC102023217 NW_004955403 23531392 23541660 - 102023217 AGCD01002248;GBDJ01026736;XR_259199 MODEL 8842745 pseudo LOC102025378 pre-mRNA-splicing factor SPF27 pseudogene NW_004955425 25170569 25172343 - 102025378 AGCD01025910 MODEL 8740018 ncrna LOC102013044 uncharacterized LOC102013044 NW_004955452 10168123 10182403 + 102013044 AGCD01044270;XR_262673 MODEL 9000713 protein-coding Cylc2 cylicin 2 INVOLVED IN acrosome assembly (ortholog); maintenance of cell number (ortholog); manchette assembly (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cytoskeletal calyx (ortholog); perinuclear theca (ortholog); sperm glycocalyx (ortholog) NW_004955419 23183700 23218555 - 102006350 AGCD01020315;AGCD01020316;AGCD01020317;GBDF01045355;XM_005382791;XM_013513110;XM_013513111;XM_013513112;XM_013513113;XM_013513114;XM_013513115;XM_013513116;XM_013513117;XM_013513118 XP_005382848;XP_013368564;XP_013368565;XP_013368566;XP_013368567;XP_013368568;XP_013368569;XP_013368570;XP_013368571;XP_013368572 MODEL 10167406 pseudo LOC102007961 Ig heavy chain V-III region 23-like NW_004955643 40217 40730 + 102007961 AGCD01077723 MODEL 8901048 protein-coding Slain2 SLAIN family member 2 INVOLVED IN cytoplasmic microtubule organization (ortholog); microtubule nucleation (ortholog); positive regulation of microtubule polymerization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); ciliary tip (ortholog) NW_004955443 134631 231866 - 102023303 AGCD01038090;AGCD01038091;AGCD01038092;AGCD01038093;AGCD01038094;GBDI01178119;XM_005391877;XM_005391878;XM_013518102;XM_013518103 XP_005391934;XP_005391935;XP_013373556;XP_013373557 MODEL 8840724 protein-coding Yap1 Yes1 associated transcriptional regulator ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); proline-rich region binding (ortholog); INVOLVED IN bud elongation involved in lung branching (ortholog); cardiac muscle tissue regeneration (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955412 5423866 5533728 + 102010882 AGCD01012633;AGCD01012634;GBBH01090880;GBDF01046541;XM_013511126 XP_013366580 MODEL 8997987 ncrna LOC102010678 uncharacterized LOC102010678 NW_004955410 29688647 29706211 + 102010678 AGCD01011293;GBDF01277999;XR_259884 MODEL 8729775 pseudo LOC102019293 elongation factor 1-beta pseudogene NW_004955424 22092321 22093115 - 102019293 AGCD01024931 MODEL 8928760 protein-coding Rab42 RAB42, member RAS oncogene family ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); sarcoma (ortholog) NW_004955452 7673187 7676293 + 102019977 AGCD01044180;AGCD01044181;GBCE01167668;GBDJ01214087;XM_013519491 XP_013374945 MODEL 8826481 protein-coding Tas2r4 taste 2 receptor member 4 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); respiratory gaseous exchange by respiratory system (ortholog) NW_004955494 1790395 1791294 - 102006361 AGCD01061423;XM_005405532 XP_005405589 MODEL 8834640 protein-coding Glud1 glutamate dehydrogenase 1 ENCODES a protein that exhibits ADP binding (ortholog); enzyme binding (ortholog); GTP binding (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); cerebellum development (ortholog); L-glutamate biosynthetic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; AGAT deficiency pathway; arginine and proline metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); mitochondrial matrix (ortholog) NW_004955510 5987811 6021001 - 102012987 AGCD01066298;GBBH01060664;GBDF01002360;XM_005407910 XP_005407967 MODEL 8846488 protein-coding LOC102014213 general transcription factor II-I repeat domain-containing protein 2B NW_004955456 13308270 13349556 + 102014213 AGCD01046586;AGCD01046587;GBDF01261563;XM_005396734;XM_005396735;XM_013520535 XP_005396791;XP_005396792;XP_013375989 MODEL 8800992 protein-coding Lbx1 ladybird homeobox 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN heart looping (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of neuron differentiation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Congenital Central Hypoventilation Syndrome 3 (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955485 9003329 9005987 + 102028421 AGCD01058739;GBCB01021735;GBCQ01007298;XM_005403879 XP_005403936 MODEL 8847202 protein-coding Lta lymphotoxin alpha INVOLVED IN defense response to Gram-positive bacterium (ortholog); humoral immune response (ortholog); lymph node development (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); allergic disease (ortholog); arteriosclerosis (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog); tumor necrosis factor receptor superfamily complex (ortholog) NW_004955437 114216 116003 + 102011907 AGCD01034101;GBBH01094522;XM_005389322;XM_005389323 XP_005389379;XP_005389380 MODEL 8813991 protein-coding Fkbp7 FKBP prolyl isomerase 7 ENCODES a protein that exhibits calcium ion binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955403 18373372 18385172 + 102026699 AGCD01002098;GBDF01188414;XM_005373377;XM_005373378 XP_005373434;XP_005373435 MODEL 39132818 snrna U6 U6 spliceosomal RNA 8950071 protein-coding Il6st interleukin 6 cytokine family signal transducer ENCODES a protein that exhibits ciliary neurotrophic factor receptor activity (ortholog); ciliary neurotrophic factor receptor binding (ortholog); coreceptor activity (ortholog); INVOLVED IN autocrine signaling (ortholog); cell population proliferation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); Alzheimer's disease (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN cell body (ortholog); ciliary neurotrophic factor receptor complex (ortholog); dendrite (ortholog) NW_004955446 11790636 11837734 + 102013983 AGCD01040212;AGCD01040213;GBDF01189975;GBDK01071858;XM_005392688 XP_005392745 MODEL 8914555 ncrna LOC102003895 uncharacterized LOC102003895 NW_004955429 23679053 23685472 + 102003895 AGCD01029078;GBDF01277697;XR_001234522;XR_261397 MODEL 8937722 pseudo LOC102018872 ELAV-like protein 1 pseudogene NW_004955574 1566040 1566941 - 102018872 AGCD01075190 MODEL 9067657 protein-coding Ttc28 tetratricopeptide repeat domain 28 ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN midbody (ortholog) NW_004955455 2322290 2964259 - 102021626 AGCD01045592;AGCD01045593;AGCD01045594;AGCD01045595;AGCD01045596;AGCD01045597;AGCD01045598;AGCD01045599;AGCD01045600;AGCD01045601;AGCD01045602;AGCD01045603;AGCD01045604;AGCD01045605;AGCD01045606;AGCD01045607;GBBH01113455;XM_013520304 XP_013375758 MODEL 39132336 snrna U6 U6 spliceosomal RNA 8909157 pseudo LOC102021455 calcyclin-binding protein pseudogene NW_004955422 12772330 12772978 - 102021455 AGCD01022798 MODEL 8974341 ncrna LOC102020335 uncharacterized LOC102020335 NW_004955416 21327879 21329980 + 102020335 AGCD01017503;GBDF01253604;XR_260408 MODEL 39131446 protein-coding F2RL1 F2R like trypsin receptor 1 8905570 protein-coding Top1 DNA topoisomerase I ENCODES a protein that exhibits ATP binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to luteinizing hormone stimulus (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN irinotecan pharmacodynamics pathway; irinotecan pharmacokinetics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); dense fibrillar component (ortholog) NW_004955445 15834017 15922785 - 102005524 AGCD01039857;AGCD01039858;AGCD01039859;AGCD01039860;GBDJ01176800;XM_005392521 XP_005392578 MODEL 9056221 protein-coding Snapc4 small nuclear RNA activating complex polypeptide 4 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN snRNA transcription by RNA polymerase II (ortholog); snRNA transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH acne (ortholog); astigmatism (ortholog); Ataxia (ortholog); FOUND IN snRNA-activating protein complex (ortholog) NW_004955513 4330579 4349136 + 102007045 AGCD01066926;AGCD01066927;GBDJ01136998;XM_005408497;XM_013506645;XM_013506646;XM_013506647;XM_013506648;XM_013506649;XM_013506650;XM_013506651;XM_013506652;XM_013506653;XM_013506654 XP_005408554;XP_013362099;XP_013362100;XP_013362101;XP_013362102;XP_013362103;XP_013362104;XP_013362105;XP_013362106;XP_013362107;XP_013362108 MODEL 8989141 ncrna LOC102009882 uncharacterized LOC102009882 NW_004955545 1976556 1983940 - 102009882 AGCD01071876;AGCD01071877;GBDI01212919;XR_001232185 MODEL 8703607 protein-coding LOC102007969 maestro heat-like repeat-containing protein family member 7 NW_004955406 37107660 37135900 + 102007969 AGCD01006571;GBDF01021853;XM_013522084 XP_013377538 MODEL 8875499 protein-coding Tdp2 tyrosyl-DNA phosphodiesterase 2 ENCODES a protein that exhibits 5'-tyrosyl-DNA phosphodiesterase activity (ortholog); magnesium ion binding (ortholog); manganese ion binding (ortholog); INVOLVED IN double-strand break repair (ortholog); neuron development (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 23 (ortholog); Breast Cancer, Familial (ortholog); cerebellar ataxia (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955483 2375213 2385354 + 102010589 AGCD01057675;GBDF01254328;XM_005403367;XM_005403368 XP_005403424;XP_005403425 MODEL 9051992 pseudo LOC102009463 cordon-bleu protein-like 1 NW_004955407 25359436 25360666 + 102009463 AGCD01007501 MODEL 8871971 protein-coding Gzf1 GDNF inducible zinc finger protein 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH genetic disease (ortholog); joint laxity, short stature, and myopia (ortholog); Larsen syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955415 30381153 30391239 + 102003536 AGCD01016661;GBDF01160848;XM_005380965;XM_005380966;XM_013512373 XP_005381022;XP_005381023;XP_013367827 MODEL 39131937 snrna U1 U1 spliceosomal RNA 8846931 protein-coding Kif24 kinesin family member 24 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); microtubule depolymerization (ortholog); negative regulation of cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); colon adenocarcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); protein-containing complex (ortholog) NW_004955472 1774850 1868525 + 102004062 AGCD01053411;AGCD01053412;AGCD01053413;GBDF01126396;XM_005401086;XM_005401087;XM_005401088;XM_005401089;XM_013522982;XM_013522984;XM_013522985;XM_013522986;XR_001237083;XR_001237084;XR_001237085 XP_005401143;XP_005401144;XP_005401145;XP_005401146;XP_013378436;XP_013378438;XP_013378439;XP_013378440 MODEL 39133054 snrna U6 U6 spliceosomal RNA 8753075 pseudo LOC102016141 protein kinase C iota type pseudogene NW_004955410 8891170 8892515 - 102016141 AGCD01010753 MODEL 8934095 protein-coding Dnah8 dynein axonemal heavy chain 8 ENCODES a protein that exhibits microtubule motor activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN axoneme (ortholog); cytoplasm (ortholog); sperm flagellum (ortholog) NW_004955437 4441776 4722261 - 102013538 AGCD01034365;AGCD01034366;AGCD01034367;AGCD01034368;AGCD01034369;GBBH01019158;XM_005389605;XM_005389606;XM_005389607;XM_005389608 XP_005389662;XP_005389663;XP_005389664;XP_005389665 MODEL 10178226 pseudo LOC106147364 chromobox protein homolog 3 pseudogene NW_004955547 1380826 1382012 + 106147364 AGCD01072219 MODEL 8909037 protein-coding Scrn2 secernin 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955451 13273421 13276563 + 102013575 AGCD01043464;GBDF01111085;XM_005394263;XM_005394264;XM_013519394;XM_013519395 XP_005394320;XP_005394321;XP_013374848;XP_013374849 MODEL 8810723 protein-coding Slc25a35 solute carrier family 25 member 35 ENCODES a protein that exhibits phosphoenolpyruvate transmembrane transporter activity (ortholog); INVOLVED IN glycerol-3-phosphate biosynthetic process (ortholog); ASSOCIATED WITH Cardiac Arrhythmias (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955467 8618572 8628857 + 102019789 AGCD01051463;GBDK01357239;XM_013522178;XM_013522179;XM_013522180;XM_013522181;XM_013522182 XP_013377632;XP_013377633;XP_013377634;XP_013377635;XP_013377636 MODEL 8846457 protein-coding Syne4 spectrin repeat containing nuclear envelope family member 4 INVOLVED IN establishment of epithelial cell apical/basal polarity (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autosomal recessive nonsyndromic deafness 76 (ortholog); cardiovascular system disease (ortholog); FOUND IN meiotic nuclear membrane microtubule tethering complex (ortholog); nuclear outer membrane (ortholog) NW_004955468 2580743 2584967 + 102013493 AGCD01051827;GBDF01143421;XM_005399934;XM_005399935;XM_005399936;XM_005399937;XM_005399938 XP_005399991;XP_005399992;XP_005399993;XP_005399994;XP_005399995 MODEL 39132669 snrna U6 U6 spliceosomal RNA 8857191 pseudo LOC102023222 calcineurin B homologous protein 1 pseudogene NW_004955452 13533225 13536269 + 102023222 AGCD01044421 MODEL 8721816 protein-coding LOC102013050 homeobox protein Hox-A4-like NW_004955407 36080940 36082388 - 102013050 AGCD01007755;GBCQ01047171;XM_013504651 XP_013360105 MODEL 8847713 ncrna LOC102025380 uncharacterized LOC102025380 NW_004955426 18639518 18643536 + 102025380 AGCD01026526;GBDF01114609;XR_261204 MODEL 8901801 protein-coding Lmbr1 limb development membrane protein 1 INVOLVED IN embryonic digit morphogenesis (ortholog); ASSOCIATED WITH acheiropody (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955491 9171462 9217996 - 102007669 AGCD01060625;GBDF01053045;GBDJ01006296;XM_005404906 XP_005404963 MODEL 8996263 ncrna LOC102003579 uncharacterized LOC102003579 NW_004955522 3869752 3871054 + 102003579 AGCD01068402;GBDI01286574;XR_264629 MODEL 8707153 protein-coding Slitrk1 SLIT and NTRK like family member 1 INVOLVED IN adult behavior (ortholog); axonogenesis (ortholog); endocytosis (ortholog); ASSOCIATED WITH Gilles de la Tourette syndrome (ortholog); trichotillomania (ortholog); FOUND IN extracellular region (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955404 24436394 24439749 + 102005990 AGCD01003820;XM_005374122 XP_005374179 MODEL 8936361 protein-coding Cyld CYLD lysine 63 deubiquitinase ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); INVOLVED IN CD4-positive or CD8-positive, alpha-beta T cell lineage commitment (ortholog); homeostasis of number of cells (ortholog); innate immune response (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH Brooke-Spiegler syndrome (ortholog); cervical cancer (ortholog); Frontotemporal Dementia and/or Amyotrophic Lateral Sclerosis-8 (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955433 8788867 8845925 + 102017373 AGCD01031603;GBDF01085055;XM_005388274;XM_005388275;XM_005388276;XM_005388277;XM_005388278;XM_005388279 XP_005388331;XP_005388332;XP_005388333;XP_005388334;XP_005388335;XP_005388336 MODEL 8823539 pseudo LOC102021458 60S ribosomal protein L27 pseudogene NW_004955494 2795835 2796269 - 102021458 AGCD01061451 MODEL 8886432 pseudo LOC102010681 WD repeat domain phosphoinositide-interacting protein 2-like NW_004955411 4563483 4584420 + 102010681 AGCD01011581 MODEL 9064792 protein-coding LOC102019294 melanoma-associated antigen 10-like NW_004955498 2586214 2586879 - 102019294 AGCD01062811;XM_005406471 XP_005406528 MODEL 9056695 protein-coding Slamf1 signaling lymphocytic activation molecule family member 1 ENCODES a protein that exhibits identical protein binding (ortholog); SH2 domain binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN leukocyte chemotaxis involved in inflammatory response (ortholog); myeloid dendritic cell activation involved in immune response (ortholog); natural killer cell differentiation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); high grade glioma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); phagocytic vesicle (ortholog) NW_004955468 12336744 12383917 - 102019586 AGCD01052149;AGCD01052150;AGCD01052151;GBDK01308588;XM_005400212;XM_013522533;XM_013522535 XP_005400269;XP_013377987;XP_013377989 MODEL 8919178 pseudo LOC102022171 galactoside 2-alpha-L-fucosyltransferase 1-like NW_004955460 11131749 11133358 - 102022171 AGCD01048629 MODEL 8781093 protein-coding Tas2r40 taste 2 receptor member 40 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog) NW_004955494 415607 416569 - 102025474 AGCD01061376;XM_005405364 XP_005405421 MODEL 8961738 protein-coding Brd10 bromodomain containing 10 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog) NW_004955434 9904255 9991651 - 102005499 AGCD01032314;AGCD01032315;AGCD01032316;GBCQ01124872;GBDJ01028811;XM_013516351 XP_013371805 MODEL 8704500 ncrna LOC102018063 uncharacterized LOC102018063 NW_004955460 12992444 12996471 - 102018063 AGCD01048666;GBDK01027678;XR_001236498;XR_001236499 MODEL 8751759 pseudo LOC102012691 DNA-directed RNA polymerase III subunit RPC7 pseudogene NW_004955551 615007 616795 + 102012691 AGCD01072666 MODEL 8878480 ncrna LOC102005341 uncharacterized LOC102005341 NW_004955408 8988844 8997598 - 102005341 AGCD01008230;GBDF01277633;XR_259674 MODEL 9016485 protein-coding LOC102004635 uncharacterized LOC102004635 NW_004955524 2023272 2031552 + 102004635 AGCD01068792;GBDF01249148;XM_013507193 XP_013362647 MODEL 9000119 pseudo LOC102009886 39S ribosomal protein L32, mitochondrial pseudogene NW_004955442 7886469 7887029 + 102009886 AGCD01037628 MODEL 9009488 protein-coding Lta4h leukotriene A4 hydrolase ENCODES a protein that exhibits aminopeptidase activity (ortholog); epoxide hydrolase activity (ortholog); leukotriene-A4 hydrolase activity (ortholog); INVOLVED IN leukotriene biosynthetic process (ortholog); leukotriene metabolic process (ortholog); peptide catabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH otitis media; acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955405 32345005 32377685 - 102007852 AGCD01005333;AY462137;GBCQ01151674;NM_001282364 AAR26536;NP_001269293;Q6S9C8 PROVISIONAL 8748668 protein-coding Nsmce2 NSE2 SUMO ligase component of SMC5/6 complex ENCODES a protein that exhibits SUMO transferase activity (ortholog); INVOLVED IN cellular senescence (ortholog); double-strand break repair via homologous recombination (ortholog); double-strand break repair via nonhomologous end joining (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bloom syndrome (ortholog); Dwarfism (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955461 199356 451716 + 102029718 AGCD01048792;AGCD01048793;AGCD01048794;AGCD01048795;GBDF01124848;XM_005397986;XM_013521309 XP_005398043;XP_013376763 MODEL 8761037 protein-coding LOC102003900 CSC1-like protein 1 NW_004955520 110432 115131 + 102003900 AGCD01068006;GBBH01033679;GBCC01001992;XM_013507053 XP_013362507 MODEL 730469315 misc_rna TTC28-AS1_3 TTC28 antisense RNA 1 conserved region 3 39133304 snrna U5 U5 spliceosomal RNA 8921510 protein-coding Thada THADA armadillo repeat containing ENCODES a protein that exhibits enzyme regulator activity (ortholog); INVOLVED IN lipid homeostasis (ortholog); negative regulation of endoplasmic reticulum calcium ion concentration (ortholog); tRNA methylation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955441 10471555 10792881 - 102024283 AGCD01037089;AGCD01037090;AGCD01037091;AGCD01037092;AGCD01037093;AGCD01037094;GBDI01224141;XM_013517530 XP_013372984 MODEL 8707038 protein-coding Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); manganese ion binding (ortholog); INVOLVED IN DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955458 14199912 14201712 + 102027496 AGCD01047829;GBDF01187898;GBDJ01087414;XM_013520977 XP_013376431 MODEL 8822927 protein-coding LOC102023228 cuticle collagen 1-like NW_004955408 6166588 6168304 - 102023228 AGCD01008164;GBDF01234789;XM_005376169 XP_005376226 MODEL 8810315 protein-coding Yars1 tyrosyl-tRNA synthetase 1 ENCODES a protein that exhibits small molecule binding (ortholog); tyrosine-tRNA ligase activity (ortholog); INVOLVED IN response to starvation (ortholog); tyrosyl-tRNA aminoacylation (ortholog); PARTICIPATES IN phenylketonuria pathway; tyrosinemia type II pathway; tyrosinemia type III pathway; ASSOCIATED WITH acute kidney failure (ortholog); anemia (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955452 11046047 11078016 - 102029820 AGCD01044322;AGCD01044323;GBDF01118229;XM_005395094 XP_005395151 MODEL 39131334 protein-coding CYREN cell cycle regulator of NHEJ 8980422 protein-coding Lbx2 ladybird homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) NW_004955424 11288897 11292143 + 102024928 AGCD01024561;GBDF01177258;XM_005385495 XP_005385552 MODEL 8732859 protein-coding Sat2 spermidine/spermine N1-acetyltransferase family member 2 ENCODES a protein that exhibits diamine N-acetyltransferase activity (ortholog); identical protein binding (ortholog); N-acetyltransferase activity (ortholog); INVOLVED IN nor-spermidine metabolic process (ortholog); polyamine biosynthetic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway NW_004955467 9306210 9308668 + 102007640 AGCD01051494;GBDK01232568;XM_005399471;XM_013522147 XP_005399528;XP_013377601 MODEL 9003741 protein-coding Slamf6 SLAM family member 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN natural killer cell differentiation (ortholog); natural killer cell proliferation (ortholog); positive regulation of interleukin-17 production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955468 12233629 12264502 - 102003749 AGCD01052148;GBBH01155535;XM_013522471;XM_013522472;XM_013522473;XM_013522474 XP_013377925;XP_013377926;XP_013377927;XP_013377928 MODEL 9035698 protein-coding Fkbp8 FKBP prolyl isomerase 8 ENCODES a protein that exhibits calmodulin binding (ortholog); disordered domain specific binding (ortholog); identical protein binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell fate specification (ortholog); dorsal/ventral neural tube patterning (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clubfoot (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial envelope (ortholog); mitochondrial membrane (ortholog) NW_004955524 3037825 3044296 + 102023733 AGCD01068853;GBDF01003178;XM_013507284;XM_013507285 XP_013362738;XP_013362739 MODEL 8868865 protein-coding Il7 interleukin 7 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); INVOLVED IN bone resorption (ortholog); cellular response to hypoxia (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Injuries (ortholog); colon adenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955444 2365077 2400953 + 102013224 AGCD01038758;AGCD01038759;AGCD01038760;AGCD01038761;GBCE01057367;GBDK01360525;XM_013518182 XP_013373636 MODEL 8973606 protein-coding Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 ENCODES a protein that exhibits glycerophosphocholine phosphodiesterase activity (ortholog); glycerophospholipase activity (ortholog); INVOLVED IN cerebral cortex neuron differentiation (ortholog); negative regulation of amyloid precursor protein biosynthetic process (ortholog); negative regulation of amyloid-beta formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); endomembrane system (ortholog); membrane (ortholog) NW_004955414 16322705 16416036 + 102026098 AGCD01015209;AGCD01015210;AGCD01015211;AGCD01015212;GBBH01206648;GBCQ01114411;XM_005379889 XP_005379946 MODEL 9026084 pseudo LOC102004637 TBC1 domain family member 12 pseudogene NW_004955435 21292150 21303948 - 102004637 AGCD01033474;AGCD01033475 MODEL 8867389 ncrna LOC102018873 uncharacterized LOC102018873 NW_004955402 23899043 23959834 + 102018873 AGCD01000634;GBDF01014734;XR_259065 MODEL 39132670 snrna U6 U6 spliceosomal RNA 8951129 protein-coding F2rl1 F2R like trypsin receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); G-protein alpha-subunit binding (ortholog); G-protein beta-subunit binding (ortholog); INVOLVED IN antimicrobial humoral response (ortholog); cell-cell junction maintenance (ortholog); defense response to virus (ortholog); PARTICIPATES IN protease mediated signaling via protease-activated receptor 2; ASSOCIATED WITH asthma (ortholog); chronic obstructive pulmonary disease (ortholog); Experimental Arthritis (ortholog); FOUND IN early endosome (ortholog); plasma membrane (ortholog); pseudopodium (ortholog) NW_004955425 24050901 24054039 - 102027322 AGCD01025874;GBCE01044808;XM_013514910 XP_013370364 MODEL 8961220 protein-coding Rab43 RAB43, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); FOUND IN cis-Golgi network membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) NW_004955429 13474460 13506979 - 102010504 AGCD01028750;AGCD01028751;AGCD01028752;GBBH01114788;GBCE01117554;XM_005386994 XP_005387051 MODEL 9054336 protein-coding Glul glutamate-ammonia ligase ENCODES a protein that exhibits dynein light chain binding (ortholog); glutamine synthetase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to starvation (ortholog); intracellular ammonium homeostasis (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; homocarnosinosis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN axon terminus (ortholog); cell body (ortholog); cell projection (ortholog) NW_004955406 21266383 21274546 - 102016128 AGCD01006121;GBCE01003977;XM_005375000 XP_005375057 MODEL 39133138 snrna U5 U5 spliceosomal RNA 39132819 snrna U6 U6 spliceosomal RNA 8828118 protein-coding LOC102010684 C-type lectin domain family 2 member F-like NW_004955413 7860820 7873954 + 102010684 AGCD01013834;GBDF01050906;XM_005378944 XP_005379001 MODEL 9036266 ncrna LOC102018066 uncharacterized LOC102018066 NW_004955411 12009836 12011426 - 102018066 AGCD01011835;GBDF01078244;XR_259933 MODEL 8990080 protein-coding Tdrd1 tudor domain containing 1 INVOLVED IN germ cell development (ortholog); piRNA processing (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); male infertility (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); P granule (ortholog) NW_004955431 19173336 19218183 + 102014477 AGCD01030444;AGCD01030445;GBDF01084155;XM_005387815;XM_005387816;XM_005387817;XM_005387818;XM_013515848 XP_005387872;XP_005387873;XP_005387874;XP_005387875;XP_013371302 MODEL 9031037 protein-coding Scrn3 secernin 3 INVOLVED IN detection of temperature stimulus involved in sensory perception of pain (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955449 935061 960514 - 102007384 AGCD01041776;AGCD01041777;AGCD01041778;GBDJ01173998;XM_005393190;XM_013518736 XP_005393247;XP_013374190 MODEL 8879317 pseudo LOC102020338 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform pseudogene NW_004955479 519760 520819 - 102020338 AGCD01056201;XR_263740 MODEL 8723480 ncrna LOC102014216 uncharacterized LOC102014216 NW_004955408 22585567 22590646 - 102014216 AGCD01008578;GBDF01208907;XR_001231743 MODEL 8998376 protein-coding Dnah9 dynein axonemal heavy chain 9 INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium movement (ortholog); mucociliary clearance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); centriole (ortholog) NW_004955467 5357500 5677144 - 102027282 AGCD01051389;AGCD01051390;AGCD01051391;AGCD01051392;AGCD01051393;AGCD01051394;AGCD01051395;AGCD01051396;GBBH01035041;XM_005399350;XM_005399351;XM_005399353;XM_013522070;XM_013522071;XM_013522072 XP_005399407;XP_005399408;XP_005399410;XP_013377524;XP_013377525;XP_013377526 MODEL 8959113 ncrna LOC102003582 uncharacterized LOC102003582 NW_004955526 1543834 1552568 + 102003582 AGCD01069274;GBDF01182742;XR_264657 MODEL 8782196 protein-coding Lmbr1l limb development membrane protein 1 like ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN hematopoietic stem cell differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); receptor-mediated endocytosis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); high grade glioma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) NW_004955500 7922422 7934538 - 102014922 AGCD01063960;AGCD01063961;GBBH01209783;GBDK01196940;XM_013505718 XP_013361172 MODEL 730469139 misc_rna TTC28-AS1_4 TTC28 antisense RNA 1 conserved region 4 8820794 protein-coding Top1mt DNA topoisomerase I mitochondrial ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog) NW_004955454 2020884 2045939 - 102027810 AGCD01045000;AGCD01045001;AGCD01045002;GBDJ01349204;XM_005395761;XM_013520028;XM_013520029;XM_013520030;XM_013520032;XR_001236215 XP_005395818;XP_013375482;XP_013375483;XP_013375484;XP_013375486 MODEL 8903274 protein-coding Snapc5 small nuclear RNA activating complex polypeptide 5 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN snRNA transcription by RNA polymerase II (ortholog); snRNA transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); long QT syndrome (ortholog); Noonan syndrome (ortholog); FOUND IN nucleoplasm (ortholog); snRNA-activating protein complex (ortholog) NW_004955450 9176462 9197592 + 102029028 AGCD01042585;GBDF01223026;XM_005393702;XM_005393703;XM_013518953 XP_005393759;XP_005393760;XP_013374407 MODEL 39132671 snrna U6 U6 spliceosomal RNA 8714362 pseudo LOC102023232 transcription termination factor 1, mitochondrial-like NW_004955458 5088372 5089612 + 102023232 AGCD01047452 MODEL 8739978 protein-coding LOC102007971 keratin-associated protein 20-2-like NW_004955407 30174961 30175134 + 102007971 AGCD01007628;XM_005375643 XP_005375700 MODEL 8868191 ncrna LOC102022173 uncharacterized LOC102022173 NW_004955462 9257426 9259568 - 102022173 AGCD01049335;GBDK01198807;XR_001236611 MODEL 8738542 pseudo LOC102012693 splicing factor, proline- and glutamine-rich pseudogene NW_004955442 15809374 15820619 - 102012693 AGCD01037879;XR_262171 MODEL 39133055 snrna U6 U6 spliceosomal RNA 8981863 gene LOC102016150 Ig heavy chain V-I region 5-like NW_004955470 291223 294846 - 102016150 AGCD01052609;XM_005400818 MODEL 10092323 ncrna LOC106147365 uncharacterized LOC106147365 NW_004955547 242646 244648 - 106147365 AGCD01072141;GBDF01303283;XR_001232217;XR_001232218 MODEL 8893516 pseudo LOC102005342 COP9 signalosome complex subunit 8 pseudogene NW_004955457 11873480 11874149 - 102005342 AGCD01046991 MODEL 8924180 protein-coding Dyrk3 dual specificity tyrosine phosphorylation regulated kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein kinase activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of DNA damage response, signal transduction by p53 class mediator (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nuclear speck (ortholog) NW_004955406 42190043 42199323 + 102020880 AGCD01006697;GBDF01047346;XM_005375399;XM_005375400;XM_005375402;XM_013502732 XP_005375456;XP_005375457;XP_005375459;XP_013358186 MODEL 9050020 protein-coding Brd2 bromodomain containing 2 ENCODES a protein that exhibits acetylation-dependent protein binding (ortholog); histone H3K14ac reader activity (ortholog); histone H4K12ac reader activity (ortholog); INVOLVED IN chromatin looping (ortholog); neural tube closure (ortholog); positive regulation of T-helper 17 cell lineage commitment (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); B-cell lymphoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytoplasm (ortholog) NW_004955437 1584890 1592486 + 102024381 AGCD01034219;GBCB01001835;XM_005389461 XP_005389518 MODEL 39132095 snrna U6 U6 spliceosomal RNA 8995472 protein-coding Slc25a36 solute carrier family 25 member 36 ENCODES a protein that exhibits pyrimidine nucleotide transmembrane transporter activity (ortholog); INVOLVED IN pyrimidine nucleotide import into mitochondrion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955508 4699668 4721198 - 102030104 AGCD01065885;GBCQ01035640;GBDI01008293;XM_013506278 XP_013361732 MODEL 9033826 protein-coding LOC102010688 olfactory receptor 52D1-like NW_004955414 21652761 21653761 + 102010688 AGCD01015425;XM_005380102 XP_005380159 MODEL 8773680 ncrna LOC102025381 uncharacterized LOC102025381 NW_004955506 3658763 3660305 + 102025381 AGCD01065318;GBDF01155637;XR_001231606;XR_264341;XR_264342 MODEL 8755931 protein-coding Nsmce3 NSE3 component of SMC5/6 complex ENCODES a protein that exhibits protein dimerization activity (ortholog); INVOLVED IN cellular response to hydroxyurea (ortholog); cellular response to radiation (ortholog); cellular response to UV (ortholog); ASSOCIATED WITH Lung Damage, Immunodeficiency and Chromosome Breakage Syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); Smc5-Smc6 complex (ortholog) NW_004955416 29261347 29262696 + 102029622 AGCD01017651;GBBH01119696;GBCB01087478;XM_013512660 XP_013368114 MODEL 9017015 pseudo LOC102004640 coiled-coil domain-containing protein 94 pseudogene NW_004955532 391528 392376 + 102004640 AGCD01070116 MODEL 8792970 protein-coding Syngap1 synaptic Ras GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN dendrite development (ortholog); maintenance of postsynaptic specialization structure (ortholog); modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH absence epilepsy (ortholog); Arnold-Chiari Malformation (ortholog); autistic disorder (ortholog); FOUND IN dendritic shaft (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955437 1950559 1981004 + 102006280 AGCD01034245;AGCD01034246;AGCD01034247;AGCD01034248;GBCE01122722;XM_013516981;XM_013516982;XM_013516983;XM_013516984;XM_013516985;XM_013516986 XP_013372435;XP_013372436;XP_013372437;XP_013372438;XP_013372439;XP_013372440 MODEL 8707854 protein-coding Fkbp9 FKBP prolyl isomerase 9 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955617 196845 234431 + 102010012 AGCD01077274;AGCD01077275;GBDF01081147;XM_005414998;XM_013510142 XP_005415055;XP_013365596 MODEL 9049508 protein-coding Slitrk2 SLIT and NTRK like family member 2 INVOLVED IN axonogenesis (ortholog); positive regulation of synapse assembly (ortholog); regulation of presynapse assembly (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); familial renal glucosuria (ortholog); intellectual disability (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) NW_004955585 479798 488046 - 102004218 AGCD01075997;GBDK01170292;XM_005414427;XM_005414428;XM_005414430;XM_005414431;XM_013509886 XP_005414484;XP_005414485;XP_005414487;XP_005414488;XP_013365340 MODEL 8927708 protein-coding Gdpgp1 GDP-D-glucose phosphorylase 1 ENCODES a protein that exhibits GDP-D-glucose phosphorylase activity (ortholog); INVOLVED IN glucose metabolic process (ortholog); response to stress (ortholog) NW_004955416 15098922 15102499 - 102021439 AGCD01017300;GBDF01188866;XM_005381528 XP_005381585 MODEL 8949239 pseudo LOC102003901 epidermal growth factor receptor substrate 15 pseudogene NW_004955433 95292 97670 + 102003901 AGCD01031301 MODEL 8808376 ncrna LOC102018876 uncharacterized LOC102018876 NW_004955451 369727 371246 - 102018876 AGCD01042932;GBDF01306894;XR_262565 MODEL 8786628 protein-coding LOC102021461 tubulin alpha-1C chain-like NW_004955499 193636 205355 + 102021461 AGCD01063193;AGCD01063194;AGCD01063195;AGCD01063196;AGCD01063197;XM_013505550 XP_013361004 MODEL 8752924 protein-coding Il7r interleukin 7 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-7 receptor activity (ortholog); INVOLVED IN B cell proliferation (ortholog); cell morphogenesis (ortholog); cellular homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic asthma (ortholog); Breast Cancer, Familial (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955426 20785896 20818512 + 102009522 AGCD01026575;GBDF01110704;XM_005386201;XM_005386202;XM_013515007;XM_013515008 XP_005386258;XP_005386259;XP_013370461;XP_013370462 MODEL 39131938 snrna U1 U1 spliceosomal RNA 8999710 ncrna LOC102019297 uncharacterized LOC102019297 NW_004955427 11260026 11277529 - 102019297 AGCD01027179;AGCD01027180;AGCD01027181;GBBH01138238;XR_001234355;XR_261252 MODEL 8941533 protein-coding Tas2r5 taste 2 receptor member 5 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog) NW_004955494 1775222 1776226 - 102006041 AGCD01061422;XM_005405531 XP_005405588 MODEL 8721023 protein-coding LOC102009464 chromosome unknown open reading frame, human C5orf15 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog) NW_004955408 5245336 5256655 - 102009464 AGCD01008129;GBCQ01005179;XM_005376124;XM_005376125 XP_005376181;XP_005376182 MODEL 8708382 protein-coding Thap1 THAP domain containing 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN DNA-templated transcription (ortholog); endothelial cell proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cervical dystonia (ortholog); Cognitive Dysfunction (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955457 13077015 13088406 - 102011739 AGCD01047037;GBCB01074927;XM_005397068;XM_013520673;XR_001236385;XR_001236386;XR_001236387;XR_001236388;XR_001236389;XR_001236390;XR_001236391;XR_001236392 XP_005397125;XP_013376127 MODEL 8907308 protein-coding Gzma granzyme A ENCODES a protein that exhibits protein homodimerization activity (ortholog); serine-type endopeptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN cytotoxic T cell pyroptotic cell death (ortholog); granzyme-mediated programmed cell death signaling pathway (ortholog); positive regulation of apoptotic process (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytolytic granule (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955446 12560831 12568023 - 102021189 AGCD01040238;GBDJ01174665;XM_005392711 XP_005392768 MODEL 8975570 protein-coding Snapin SNAP associated protein ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); SNARE binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); autophagosome maturation (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); COVID-19 (ortholog); neurodevelopmental disorder with structural brain abnormalities and craniofacial abnormalities (ortholog); FOUND IN acrosomal vesicle (ortholog); BLOC-1 complex (ortholog); BORC complex (ortholog) NW_004955545 306546 308229 + 102018651 AGCD01071783;GBCB01002603;XM_005411436 XP_005411493 MODEL 8991736 ncrna LOC102018069 uncharacterized LOC102018069 NW_004955412 17652061 17663017 - 102018069 AGCD01012916;GBDF01083884;XR_001232864 MODEL 9022313 protein-coding Slamf7 SLAM family member 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of natural killer cell activation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955468 12440157 12457445 + 102020900 AGCD01052152;GBDK01184416;XM_005400217;XM_013522531 XP_005400274;XP_013377985 MODEL 8948060 protein-coding LOC102009890 kallikrein-4-like NW_004955558 2014462 2080060 + 102009890 AGCD01073496;AGCD01073497;AGCD01073498;AGCD01073499;AGCD01073500;AGCD01073501;AGCD01073502;AGCD01073503;AGCD01073504;AGCD01073505;AGCD01073506;AGCD01073507;AGCD01073508;AGCD01073509;XM_013508851 XP_013364305 MODEL 8860481 protein-coding Satb1 SATB homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN activated T cell proliferation (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); CD8-positive, alpha-beta T cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN chromatin (ortholog); heterochromatin (ortholog); nuclear body (ortholog) NW_004955430 10587539 10683887 - 102029889 AGCD01029438;AGCD01029439;AGCD01029440;GBDI01013807;XM_005387457;XM_005387458;XM_013515670;XM_013515671;XM_013515672 XP_005387514;XP_005387515;XP_013371124;XP_013371125;XP_013371126 MODEL 8781623 ncrna LOC102020339 uncharacterized LOC102020339 NW_004955417 27291344 27294537 - 102020339 AGCD01018545;GBDF01290011;XR_260505 MODEL 8742730 pseudo LOC102003583 zinc transporter ZIP2 pseudogene NW_004955436 12539750 12540990 + 102003583 AGCD01033843 MODEL 8840440 protein-coding Kif25 kinesin family member 25 INVOLVED IN establishment of spindle orientation (ortholog); negative regulation of mitotic centrosome separation (ortholog); nucleus localization (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955439 14282985 14311330 - 102026261 AGCD01035973;GBDJ01352842;XM_013517304 XP_013372758 MODEL 8827916 protein-coding Yars2 tyrosyl-tRNA synthetase 2 ENCODES a protein that exhibits L-tyrosine binding (ortholog); protein homodimerization activity (ortholog); tRNA binding (ortholog); INVOLVED IN mitochondrial tyrosyl-tRNA aminoacylation (ortholog); tRNA aminoacylation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Cafe au lait Spots, Multiple (ortholog); cardiovascular system disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955505 3004084 3011003 + 102006369 AGCD01065010;GBCB01061117;GBDF01222575;XM_005407111 XP_005407168 MODEL 8955652 protein-coding Glyat glycine-N-acyltransferase ENCODES a protein that exhibits glycine N-acyltransferase activity (ortholog); glycine N-benzoyltransferase activity (ortholog); INVOLVED IN benzoyl-CoA metabolic process (ortholog); glycine metabolic process (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955511 3670736 3683751 - 102006697 AGCD01066472;GBDI01296560;XM_005408048;XM_005408049 XP_005408105;XP_005408106 MODEL 8993790 protein-coding Rab44 RAB44, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN histamine secretion by mast cell (ortholog); histamine secretion mediated by IgE immunoglobulin (ortholog); mast cell degranulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); familial meningioma (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) NW_004955437 6223281 6250068 - 102025839 AGCD01034422;AGCD01034423;AGCD01034424;GBBH01203108;XM_005389639;XM_005389640;XM_005389641;XM_005389642;XM_005389643;XM_005389644;XM_005389645;XM_013517131;XM_013517132 XP_005389696;XP_005389697;XP_005389698;XP_005389699;XP_005389700;XP_005389701;XP_005389702;XP_013372585;XP_013372586 MODEL 8714690 protein-coding Ttc29 tetratricopeptide repeat domain 29 INVOLVED IN cilium movement (ortholog); cilium organization (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN sperm flagellum (ortholog); sperm principal piece (ortholog) NW_004955428 2378498 2571246 - 102011464 AGCD01027633;AGCD01027634;AGCD01027635;GBBH01076528;XM_005386666;XM_013515339;XM_013515340 XP_005386723;XP_013370793;XP_013370794 MODEL 8923130 protein-coding Gem GTP binding protein overexpressed in skeletal muscle ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN chromosome organization (ortholog); metaphase chromosome alignment (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); glaucoma (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); midbody (ortholog); mitotic spindle (ortholog) NW_004955417 10475967 10486879 - 102024564 AGCD01018071;GBCE01034424;GBDI01358204;XM_013512843 XP_013368297 MODEL 8912829 protein-coding Cyria CYFIP related Rac1 interactor A ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955487 9545639 9636183 - 102013618 AGCD01059461;GBCE01085376;XM_005404447;XM_005404449;XM_013504374 XP_005404504;XP_005404506;XP_013359828 MODEL 39132821 snrna U6 U6 spliceosomal RNA 8914386 pseudo LOC102022177 serpin B9-like NW_004955465 10417040 10426823 + 102022177 AGCD01050509;AGCD01050510 MODEL 8730871 ncrna LOC102013053 uncharacterized LOC102013053 NW_004955456 10144425 10145561 + 102013053 AGCD01046518;GBDF01025520;XR_262893 MODEL 8794173 pseudo LOC102016152 structural maintenance of chromosomes protein 3 pseudogene NW_004955472 2694507 2698195 - 102016152 AGCD01053485;AGCD01053486 MODEL 9068311 protein-coding Tdrd12 tudor domain containing 12 INVOLVED IN fertilization (ortholog); male meiotic nuclear division (ortholog); piRNA processing (ortholog); ASSOCIATED WITH cervical cancer (ortholog); lung cancer (ortholog); male infertility (ortholog); FOUND IN PET complex (ortholog) NW_004955468 5201216 5277062 - 102028402 AGCD01051959;AGCD01051960;AGCD01051961;AGCD01051962;GBCQ01087913;XM_005400080;XM_005400081;XM_005400082;XM_005400083;XM_005400084;XM_005400085 XP_005400137;XP_005400138;XP_005400139;XP_005400140;XP_005400141;XP_005400142 MODEL 9062424 ncrna LOC102018076 uncharacterized LOC102018076 NW_004955413 26991201 26996200 + 102018076 AGCD01014489;AGCD01014490;GBCB01118470;XR_260115 MODEL 8734439 protein-coding Slc25a37 solute carrier family 25 member 37 ENCODES a protein that exhibits ferrous iron transmembrane transporter activity (ortholog); iron ion transmembrane transporter activity (ortholog); INVOLVED IN iron import into the mitochondrion (ortholog); positive regulation of hemoglobin biosynthetic process (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH anemia (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955403 46697560 46739082 + 102019559 AGCD01002866;AGCD01002867;GBDF01004000;XM_005373702;XM_013514004;XM_013514005 XP_005373759;XP_013369458;XP_013369459 MODEL 8965289 pseudo LOC102010691 nudC domain-containing protein 2-like NW_004955475 11122125 11122610 - 102010691 AGCD01055143 MODEL 8923466 ncrna LOC102014221 uncharacterized LOC102014221 NW_004955463 3968794 3970059 - 102014221 AGCD01049600;GBDF01080280;XR_263143 MODEL 8877455 protein-coding F2rl2 coagulation factor II thrombin receptor like 2 ENCODES a protein that exhibits proteinase-activated receptor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; protease mediated signaling via protease-activated receptor 3; FOUND IN apical plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955425 24246333 24254887 + 102021260 AGCD01025883;GBDK01113155;XM_005386039 XP_005386096 MODEL 9050522 protein-coding Dnai1 dynein axonemal intermediate chain 1 INVOLVED IN cilium movement (ortholog); determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); bronchiectasis (ortholog); FOUND IN 9+2 motile cilium (ortholog); centrosome (ortholog); cilium (ortholog) NW_004955472 1599265 1668214 - 102014236 AGCD01053403;AGCD01053404;AGCD01053405;AGCD01053406;AGCD01053407;AGCD01053408;AGCD01053409;GBBH01062174;GBCE01133976;XM_013522970 XP_013378424 MODEL 9047053 protein-coding Lmbrd1 LMBR1 domain containing 1 ENCODES a protein that exhibits ABC-type vitamin B12 transporter activity (ortholog); AP-2 adaptor complex binding (ortholog); clathrin heavy chain binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); gastrulation (ortholog); insulin receptor internalization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Cognitive Dysfunction (ortholog); FOUND IN clathrin-coated endocytic vesicle (ortholog); clathrin-coated vesicle (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955488 4774835 4879401 - 102024687 AGCD01059605;AGCD01059606;GBBH01208099;XM_005404466 XP_005404523 MODEL 39133141 snrna U5 U5 spliceosomal RNA 8741908 protein-coding Tas2r60 taste 2 receptor member 60 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN membrane (ortholog) NW_004955494 220847 221851 - 102024923 AGCD01061370;XM_005405523 XP_005405580 MODEL 9008699 ncrna LOC102007974 uncharacterized LOC102007974 NW_004955462 12999013 13022290 + 102007974 AGCD01049421;GBDF01013996;XR_263132 MODEL 39133056 snrna U6 U6 spliceosomal RNA 8904635 protein-coding LOC102012694 solute carrier organic anion transporter family member 5A1 NW_004955444 9855499 9886614 + 102012694 AGCD01038995;GBCQ01074693;XM_013518225 XP_013373679 MODEL 8760306 protein-coding Glyatl3 glycine-N-acyltransferase like 3 ENCODES a protein that exhibits glycine N-acyltransferase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog) NW_004955410 33444100 33462285 - 102003004 AGCD01011371;GBBH01213825;XM_005377533;XM_005377534 XP_005377590;XP_005377591 MODEL 8844512 protein-coding Brd3 bromodomain containing 3 ENCODES a protein that exhibits histone H3K18cr reader activity (ortholog); histone H3K27cr reader activity (ortholog); histone H3K9cr reader activity (ortholog); INVOLVED IN endodermal cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein localization to chromatin (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleoplasm (ortholog) NW_004955513 3145267 3164791 - 102023386 AGCD01066895;AGCD01066896;GBDK01134998;XM_013506673;XM_013506674;XM_013506675;XM_013506676 XP_013362127;XP_013362128;XP_013362129;XP_013362130 MODEL 9030923 protein-coding Scrt1 scratch family transcriptional repressor 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of neuron migration (ortholog); ASSOCIATED WITH sarcoma (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog) NW_004955454 2948137 2953955 - 102028821 AGCD01045040;AGCD01045041;GBDF01045105;GBDF01261759;XM_013520102 XP_013375556 MODEL 8970204 ncrna LOC102009891 uncharacterized LOC102009891 NW_004955444 753602 758219 - 102009891 AGCD01038683;GBDF01111656;XR_001235508 MODEL 9066760 pseudo LOC102025386 spindlin-1 pseudogene NW_004955433 5076994 5077704 + 102025386 AGCD01031489 MODEL 9051705 protein-coding Dyrk4 dual specificity tyrosine phosphorylation regulated kinase 4 ASSOCIATED WITH cholangiocarcinoma (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955413 2359480 2410395 + 102003640 AGCD01013544;AGCD01013545;XM_005378732;XM_005378733;XM_013511555;XM_013511556;XM_013511557;XM_013511558;XM_013511559;XM_013511560;XM_013511561;XM_013511562;XM_013511563;XM_013511565;XM_013511566;XM_013511567 XP_005378789;XP_005378790;XP_013367009;XP_013367010;XP_013367011;XP_013367012;XP_013367013;XP_013367014;XP_013367015;XP_013367016;XP_013367017;XP_013367019;XP_013367020;XP_013367021 MODEL 8771298 protein-coding Syngr1 synaptogyrin 1 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); modulation of chemical synaptic transmission (ortholog); protein targeting (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); melanosome (ortholog); Schaffer collateral - CA1 synapse (ortholog) NW_004955413 25244679 25269725 + 102028626 AGCD01014399;GBCB01023804;XM_005379287;XM_005379288;XM_005379289;XM_013511529 XP_005379344;XP_005379345;XP_005379346;XP_013366983 MODEL 10371996 protein-coding Fkbpl FKBP prolyl isomerase like INVOLVED IN regulation of angiogenesis (ortholog); regulation of blood vessel branching (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN extracellular region (ortholog) NW_004955437 592098 594244 - 106146274 AGCD01034150;GBDJ01373671;XM_013516901;XM_013516902 XP_013372355;XP_013372356 MODEL 8945015 protein-coding LOC102003903 ADP-ribosylation factor-like protein 4A NW_004955436 16294434 16295575 - 102003903 AGCD01033912;GBDF01008117;XM_005389238 XP_005389295 MODEL 8997546 pseudo LOC102021462 translocation protein SEC62 pseudogene NW_004955425 16717873 16720163 - 102021462 AGCD01025619;XM_005386094 MODEL 8815670 protein-coding Lca5 lebercilin LCA5 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN intraciliary transport (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); blindness (ortholog); cervical cancer (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); ciliary tip (ortholog) NW_004955502 7325650 7373641 - 102008241 AGCD01064440;AGCD01064441;GBDI01325151;XM_013505843 XP_013361297 MODEL 8773292 protein-coding LOC102018880 uncharacterized protein C1orf43 NW_004956345 1240 4569 - 102018880 AGCD01079460;GBDF01045162;GBDI01007030;XM_005415197 XP_005415254 MODEL 39131939 snrna U1 U1 spliceosomal RNA 8759711 protein-coding Ltap1 lipid transport auxiliary protein 1 INVOLVED IN phagocytosis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog); Golgi apparatus (ortholog) NW_004955545 760857 767801 - 102008353 AGCD01071817;GBCQ01003944;XM_005411507;XM_005411508 XP_005411564;XP_005411565 MODEL 9004087 pseudo LOC102019299 ferritin heavy chain pseudogene NW_004955506 5978894 5981769 + 102019299 AGCD01065396 MODEL 8832531 protein-coding Top2a DNA topoisomerase II alpha ENCODES a protein that exhibits ATP binding (ortholog); ATP-dependent activity, acting on DNA (ortholog); chromatin binding (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); cerebellar granule cell differentiation (ortholog); cerebellar Purkinje cell differentiation (ortholog); PARTICIPATES IN doxorubicin pharmacodynamics pathway; etoposide pharmacodynamics pathway; etoposide pharmacokinetics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN centriole (ortholog); chromosome, centromeric region (ortholog); condensed chromosome (ortholog) NW_004955451 14928273 14964855 - 102021727 AGCD01043584;AGCD01043585;AGCD01043586;AGCD01043587;AGCD01043588;AGCD01043589;GBBH01012210;GBDI01224195;XM_013519327 XP_013374781 MODEL 8753865 pseudo LOC102003588 60S ribosomal protein L37 pseudogene NW_004955440 16839141 16839617 + 102003588 AGCD01036533 MODEL 8955221 pseudo LOC102009469 non-POU domain-containing octamer-binding protein pseudogene NW_004955458 11867254 11868199 - 102009469 AGCD01047762 MODEL 39132822 snrna U6 U6 spliceosomal RNA 8817137 protein-coding LOC102005343 cytochrome P450 2J2-like NW_004955457 13519513 13582133 + 102005343 AGCD01047047;AGCD01047048;AGCD01047049;GBCB01120042;XM_013520668 XP_013376122 MODEL 39132096 snrna U6 U6 spliceosomal RNA 8821282 protein-coding Ttc3 tetratricopeptide repeat domain 3 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein K48-linked ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleus (ortholog) NW_004955407 36175312 36307250 + 102014212 AGCD01007760;AGCD01007761;AGCD01007762;AGCD01007763;GBDF01251910;XM_013504664;XM_013504667;XM_013504668;XM_013504669;XM_013504671;XM_013504674 XP_013360118;XP_013360121;XP_013360122;XP_013360123;XP_013360125;XP_013360128 MODEL 8875411 ncrna LOC102007976 uncharacterized LOC102007976 NW_004955465 144325 179094 + 102007976 AGCD01050304;GBDF01285865;XR_263226 MODEL 8873541 protein-coding LOC102004641 cytochrome b-245 light chain ENCODES a protein that exhibits electron transfer activity (ortholog); protein heterodimerization activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to gamma radiation (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); dendrite (ortholog) NW_004955541 2570843 2573822 - 102004641 AGCD01071416;GBCQ01010127;GBDI01016531;XM_013507989 XP_013363443 MODEL 8884003 protein-coding LOC102016159 uncharacterized LOC102016159 NW_004955416 16349780 16351627 - 102016159 AGCD01017352;GBDI01352072;XM_013512424 XP_013367878 MODEL 9008976 protein-coding LOC102020340 histone H1t-like NW_004955483 926053 926748 + 102020340 AGCD01057637;GBDF01277700;XM_005403307 XP_005403364 MODEL 8762508 protein-coding Glyctk glycerate kinase ENCODES a protein that exhibits glycerate kinase activity (ortholog); INVOLVED IN fructose catabolic process (ortholog); PARTICIPATES IN D-glycericacidemia pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); D-glyceric aciduria (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955532 3933964 3939858 + 102028574 AGCD01070305;GBDF01189334;XM_005410350;XM_005410351;XM_005410352;XM_005410353;XM_005410354 XP_005410407;XP_005410408;XP_005410409;XP_005410410;XP_005410411 MODEL 8742543 protein-coding Slitrk3 SLIT and NTRK like family member 3 INVOLVED IN axonogenesis (ortholog); gephyrin clustering involved in postsynaptic density assembly (ortholog); neurotransmitter-gated ion channel clustering (ortholog); ASSOCIATED WITH intellectual disability (ortholog); lung squamous cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cell surface (ortholog); GABA-ergic synapse (ortholog); postsynaptic density membrane (ortholog) NW_004955448 14846976 14852612 - 102025960 AGCD01041649;AGCD01041650;GBDJ01262456;XM_013518581 XP_013374035 MODEL 8826608 pseudo LOC102010693 charged multivesicular body protein 1b-like NW_004955416 11825639 11828480 - 102010693 AGCD01017192 MODEL 8905879 protein-coding Il9 interleukin 9 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-9 receptor binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Airway Obstruction (ortholog); asthma (ortholog); FOUND IN extracellular region (ortholog) NW_004955408 30950816 30953571 - 102012504 AGCD01008818;GBDF01218996;XM_005376487 XP_005376544 MODEL 9044779 pseudo LOC102023239 40S ribosomal protein S18 pseudogene NW_004955410 25328235 25339663 - 102023239 AGCD01011150 MODEL 39132929 snrna U5 U5 spliceosomal RNA 8850899 protein-coding Ybey ybeY metalloendoribonuclease ENCODES a protein that exhibits RNA endonuclease activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) NW_004955407 42706407 42710962 + 102017954 AGCD01007895;GBCE01160007;XM_005375930;XR_001231523;XR_259644;XR_259645 XP_005375987 MODEL 8919855 protein-coding Kif26a kinesin family member 26A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); enteric nervous system development (ortholog); microtubule-based movement (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955538 2801706 2832888 + 102017381 AGCD01071142;GBBH01077414;GBDF01148658;XM_013507896 XP_013363350 MODEL 8941779 protein-coding Rab4a RAB4A, member RAS oncogene family ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); G protein activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); neurotransmitter receptor transport postsynaptic membrane to endosome (ortholog); protein transport (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); early endosome membrane (ortholog); endosome (ortholog) NW_004955492 8715252 8743432 - 102018840 AGCD01060825;GBDF01087629;GBDJ01234437;XM_005405009 XP_005405066 MODEL 9037134 protein-coding Gzmk granzyme K ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); pattern recognition receptor activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN complement activation, GZMK pathway (ortholog); opsonization (ortholog); positive regulation of inflammatory response (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); lung cancer (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); symbiont cell surface (ortholog) NW_004955446 12623257 12633584 - 102022137 AGCD01040239;GBDK01090140;XM_005392713 XP_005392770 MODEL 39133057 snrna U6 U6 spliceosomal RNA 8771733 protein-coding Snca synuclein alpha ENCODES a protein that exhibits actin binding (ortholog); alpha-tubulin binding (ortholog); arachidonate binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); amyloid fibril formation (ortholog); behavioral response to cocaine (ortholog); PARTICIPATES IN apoptotic cell death pathway; Parkinson's disease pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); amphetamine abuse (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); axon terminus (ortholog) NW_004955405 854011 962741 - 102008373 AGCD01004588;GBBH01051195;GBDK01308795;XM_013517311 XP_013372765 MODEL 8763529 protein-coding Slamf8 SLAM family member 8 ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN B-1 B cell lineage commitment (ortholog); cellular response to xenobiotic stimulus (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955468 11623092 11632566 + 102008521 AGCD01052136;GBBH01203155;XM_005400176 XP_005400233 MODEL 8946494 protein-coding Nsmce4a NSE4A component of SMC5/6 complex INVOLVED IN DNA damage response (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); Smc5-Smc6 complex (ortholog) NW_004955477 300467 312110 - 102015511 AGCD01055485;GBDK01192031;XM_005401917 XP_005401974 MODEL 9037520 protein-coding Satb2 SATB homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cartilage development (ortholog); chromatin remodeling (ortholog); embryonic pattern specification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anisometropia (ortholog); astigmatism (ortholog); FOUND IN histone deacetylase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955403 1663676 1811088 + 102010009 AGCD01001724;AGCD01001725;GBCE01064967;XM_013511972 XP_013367426 MODEL 39132672 snrna U6 U6 spliceosomal RNA 9030847 protein-coding Scrt2 scratch family transcriptional repressor 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of neuron migration (ortholog); FOUND IN nucleus (ortholog) NW_004955597 504160 515609 - 102027133 AGCD01076558;AGCD01076559;XM_013510024 XP_013365478 MODEL 8715843 protein-coding F2rl3 F2R like thrombin or trypsin receptor 3 ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN platelet activation (ortholog); platelet aggregation (ortholog); positive regulation of release of sequestered calcium ion into cytosol (ortholog); PARTICIPATES IN protease mediated signaling via protease-activated receptor 4; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); esophageal cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955524 1045493 1047924 - 102029220 AGCD01068733;GBDF01142310;XM_005409505;XM_005409506 XP_005409562;XP_005409563 MODEL 9026487 protein-coding Slc25a38 solute carrier family 25 member 38 ENCODES a protein that exhibits glycine transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); glycine import into mitochondrion (ortholog); PARTICIPATES IN heme biosynthetic pathway; ASSOCIATED WITH autosomal recessive pyridoxine-refractory sideroblastic anemia 2 (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955420 29988147 29996485 - 102012762 AGCD01021524;GBCC01041557;GBDJ01135342;XM_013513554 XP_013369008 MODEL 8756689 ncrna LOC102003910 uncharacterized LOC102003910 NW_004955547 2449218 2452224 + 102003910 AGCD01072281;GBDF01261280;XR_001232226;XR_001232227;XR_264909 MODEL 8913666 protein-coding Thap11 THAP domain containing 11 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell population proliferation (ortholog); electron transport chain (ortholog); gene expression (ortholog); ASSOCIATED WITH methylmalonic aciduria and homocystinuria type cblC (ortholog); Methylmalonic Aciduria and Homocystinuria, cblL Type (ortholog); Spinocerebellar Ataxia 51 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955484 8857015 8859091 - 102022193 AGCD01058398;GBCQ01010799;XM_005403621 XP_005403678 MODEL 8738163 protein-coding Fkrp fukutin related protein ENCODES a protein that exhibits dystroglycan binding (ortholog); identical protein binding (ortholog); laminin binding (ortholog); INVOLVED IN adult walking behavior (ortholog); basement membrane organization (ortholog); bone mineralization (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); FOUND IN cardiac myofibril (ortholog); catalytic complex (ortholog); cytoplasm (ortholog) NW_004955574 779672 789621 + 102017286 AGCD01075128;AGCD01075129;GBBH01007373;GBBH01007374;XM_013509559 XP_013365013 MODEL 9042999 protein-coding Dnai2 dynein axonemal intermediate chain 2 ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); cilium movement (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Ciliary Motility Disorders (ortholog); Kartagener syndrome (ortholog); FOUND IN 9+2 motile cilium (ortholog); axonemal dynein complex (ortholog); axoneme (ortholog) NW_004955553 1188279 1212053 + 102006501 AGCD01072872;GBDF01087219;XM_005412227;XM_005412229;XM_013508632;XM_013508633 XP_005412284;XP_005412286;XP_013364086;XP_013364087 MODEL 9020311 protein-coding Dysf dysferlin ENCODES a protein that exhibits alpha-tubulin binding (ortholog); calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to osmotic stress (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytoplasmic vesicle membrane (ortholog) NW_004955424 13756130 13970437 - 102025026 AGCD01024637;AGCD01024638;AGCD01024639;AGCD01024640;GBDJ01131542;XM_005385587;XM_005385588;XM_005385589;XM_005385590;XM_005385591;XM_005385592;XM_005385593;XM_005385594;XM_005385595;XM_005385596;XM_005385597;XM_005385598;XM_005385599;XM_005385600;XM_013514696;XM_013514697 XP_005385644;XP_005385645;XP_005385646;XP_005385647;XP_005385648;XP_005385649;XP_005385650;XP_005385651;XP_005385652;XP_005385653;XP_005385654;XP_005385655;XP_005385656;XP_005385657;XP_013370150;XP_013370151 MODEL 8846577 protein-coding Gemin2 gem nuclear organelle associated protein 2 INVOLVED IN protein-containing complex assembly (ortholog); spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Gemini of Cajal bodies (ortholog) NW_004955409 22142082 22153699 - 102016352 AGCD01010021;AGCD01010022;GBDK01323617;GBDK01323624;XM_013510473;XM_013510474 XP_013365927;XP_013365928 MODEL 8836306 protein-coding Ltb lymphotoxin beta INVOLVED IN gene expression (ortholog); lymph node development (ortholog); positive regulation of interleukin-12 production (ortholog); ASSOCIATED WITH contact dermatitis (ortholog); cutaneous leishmaniasis (ortholog); disease of cellular proliferation (ortholog); FOUND IN plasma membrane (ortholog); tumor necrosis factor receptor superfamily complex (ortholog) NW_004955437 120966 123973 - 102013209 AGCD01034101;AGCD01034102;GBBH01089970;GBDJ01064428;XM_013516928 XP_013372382 MODEL 8706800 protein-coding LOC102018881 keratin, type I cytoskeletal 28 NW_004955451 15254864 15264012 - 102018881 AGCD01043603;AGCD01043604;GBDK01170754;XM_005394373 XP_005394430 MODEL 8877473 pseudo LOC102022180 uncharacterized protein C11orf57 pseudogene NW_004955466 12265025 12265773 + 102022180 AGCD01051118 MODEL 8821253 pseudo LOC102013054 nuclear inhibitor of protein phosphatase 1-like NW_004955407 28446035 28447589 + 102013054 AGCD01007586 MODEL 9049323 protein-coding Tdrd15 tudor domain containing 15 NW_004955469 3542765 3583503 + 102019380 AGCD01052303;XM_013522573 XP_013378027 MODEL 8888144 protein-coding LOC102012695 olfactory receptor 2Z1 ASSOCIATED WITH prostate cancer (ortholog) NW_004955563 779884 780825 - 102012695 AGCD01074088;XM_005413204 XP_005413261 MODEL 8893517 ncrna LOC102005345 uncharacterized LOC102005345 NW_004955460 7260247 7263228 + 102005345 AGCD01048480;GBDF01208870;XR_263036 MODEL 39133058 snrna U6 U6 spliceosomal RNA 8772269 pseudo LOC102009892 zinc finger CCCH domain-containing protein 15-like NW_004955566 44899 55696 + 102009892 AGCD01074343 MODEL 8962995 protein-coding Syngr2 synaptogyrin 2 INVOLVED IN protein targeting (ortholog); regulated exocytosis (ortholog); synaptic vesicle membrane organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); membrane (ortholog); mitochondrion (ortholog) NW_004955506 4391587 4393475 - 102026452 AGCD01065337;GBCB01004940;GBDK01002828;XM_013505966 XP_013361420 MODEL 8926974 ncrna LOC102020344 uncharacterized LOC102020344 NW_004955420 19033302 19040719 + 102020344 AGCD01021053;GBDJ01305271;XR_260724 MODEL 9021449 protein-coding Lca5l lebercilin LCA5 like NW_004955407 38176533 38220781 - 102020088 AGCD01007798;AGCD01007799;GBBH01037007;GBDF01048282;XM_013504856;XM_013504861;XM_013504865 XP_013360310;XP_013360315;XP_013360319 MODEL 8715506 protein-coding LOC102010697 olfactory receptor 2L3-like NW_004955418 30109107 30110042 + 102010697 AGCD01019503;XM_005382366 XP_005382423 MODEL 8785913 protein-coding Slitrk4 SLIT and NTRK like family member 4 INVOLVED IN axonogenesis (ortholog); behavioral fear response (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Dwarfism (ortholog); esophageal cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog) NW_004955539 1929681 1942525 - 102020162 AGCD01071215;GBDJ01343869;XM_005410903;XM_005410904 XP_005410960;XP_005410961 MODEL 8930540 protein-coding Il9r interleukin 9 receptor ENCODES a protein that exhibits interleukin-9 binding (ortholog); interleukin-9 receptor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH asthma (ortholog); Brain Injuries (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) NW_004955442 17115207 17128899 + 102010526 AGCD01037937;XM_013517828;XM_013517829 XP_013373282;XP_013373283 MODEL 9034501 ncrna LOC102009472 uncharacterized LOC102009472 NW_004955462 1145564 1150883 - 102009472 AGCD01049102;AGCD01049103;GBDF01041427;XR_263087 MODEL 39132867 snrna U5 U5 spliceosomal RNA 8973419 protein-coding LOC102019301 membrane-spanning 4-domains subfamily A member 6D-like NW_004955511 4880379 4889743 - 102019301 AGCD01066538;GBCQ01057843;XM_005408078;XM_005408079 XP_005408135;XP_005408136 MODEL 8824698 protein-coding Top2b DNA topoisomerase II beta ENCODES a protein that exhibits chromatin binding (ortholog); DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN axonogenesis (ortholog); B cell differentiation (ortholog); cellular response to ATP (ortholog); PARTICIPATES IN doxorubicin pharmacodynamics pathway; doxorubicin response pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); B-Cell Immunodeficiency, Distal Limb Anomalies, and Urogenital Malformations (ortholog); Developmental Disabilities (ortholog); FOUND IN chromosome (ortholog); cytosol (ortholog); heterochromatin (ortholog) NW_004955430 17457603 17523115 - 102012788 AGCD01029657;AGCD01029658;AGCD01029659;AGCD01029660;AGCD01029661;AGCD01029662;GBCE01117472;GBDI01076437;XM_005387486 XP_005387543 MODEL 8756104 protein-coding Cyrib CYFIP related Rac1 interactor B ENCODES a protein that exhibits MHC class Ib protein binding, via antigen binding groove (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to molecule of bacterial origin (ortholog); negative regulation of actin filament polymerization (ortholog); negative regulation of small GTPase mediated signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN cilium (ortholog); mitochondrion (ortholog) NW_004955461 4634324 4786723 - 102006550 AGCD01048870;AGCD01048871;AGCD01048872;AGCD01048873;AGCD01048874;AGCD01048875;GBDI01133387;XM_005397991;XM_005397992;XM_005397993;XM_013521325;XM_013521326 XP_005398048;XP_005398049;XP_005398050;XP_013376779;XP_013376780 MODEL 151707871 protein-coding BRD3OS BRD3 opposite strand 39132823 snrna U6 U6 spliceosomal RNA 8812881 protein-coding LOC102018077 WD repeat-containing protein 87-like NW_004955468 2223885 2241409 - 102018077 AGCD01051804;GBBH01142412;XM_013522301;XM_013522302;XM_013522303 XP_013377755;XP_013377756;XP_013377757 MODEL 39132097 snrna U6 U6 spliceosomal RNA 8757509 pseudo LOC102014222 pre-mRNA-splicing factor SLU7-like NW_004955410 4406190 4432857 + 102014222 AGCD01010666 MODEL 8868724 protein-coding Kif26b kinesin family member 26B INVOLVED IN establishment of cell polarity (ortholog); positive regulation of cell-cell adhesion (ortholog); ureteric bud invasion (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955406 8289774 8738131 + 102009798 AGCD01005801;AGCD01005802;AGCD01005803;AGCD01005804;AGCD01005805;AGCD01005806;AGCD01005807;GBBH01168941;XM_005374788;XM_013520421;XM_013520424 XP_005374845;XP_013375875;XP_013375878 MODEL 8771462 protein-coding Tasl TLR adaptor interacting with endolysosomal SLC15A4 INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of toll-like receptor 7 signaling pathway (ortholog); positive regulation of toll-like receptor 8 signaling pathway (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endolysosome membrane (ortholog) NW_004955531 207614 293127 + 102017498 AGCD01069977;AGCD01069978;AGCD01069979;AGCD01069980;AGCD01069981;AGCD01069982;AGCD01069983;AGCD01069984;AGCD01069985;AGCD01069986;AGCD01069987;GBCQ01146366;XM_005410129;XM_013507559 XP_005410186;XP_013363013 MODEL 9002255 protein-coding LOC102007981 translation initiation factor IF-2-like NW_004955413 24038776 24042868 - 102007981 AGCD01014345;GBDI01226162;XM_005379216 XP_005379273 MODEL 8922699 ncrna LOC102025389 uncharacterized LOC102025389 NW_004955435 618650 622278 - 102025389 AGCD01032727;GBDF01254184;XR_261650 MODEL 8802708 protein-coding LOC102004649 N-formyl peptide receptor 2-like NW_004955558 759900 765019 - 102004649 AGCD01073389;XM_013508846 XP_013364300 MODEL 8975117 protein-coding Ttc31 tetratricopeptide repeat domain 31 ASSOCIATED WITH colorectal cancer (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955424 11297666 11304937 - 102025813 AGCD01024561;GBDK01014863;XM_005385498;XM_005385499;XM_005385500;XM_013514655;XM_013514656 XP_005385555;XP_005385556;XP_005385557;XP_013370109;XP_013370110 MODEL 8874791 ncrna LOC102016160 uncharacterized LOC102016160 NW_004955481 10053363 10056863 + 102016160 AGCD01057135;GBDF01249735;XR_263806 MODEL 8817488 ncrna LOC102021468 uncharacterized LOC102021468 NW_004955429 22067479 22079189 + 102021468 AGCD01029017;GBDK01379872;XR_001234457;XR_001234458 MODEL 39131940 snrna U1 U1 spliceosomal RNA 10183523 ncrna LOC106147366 uncharacterized LOC106147366 NW_004955547 1789443 1794040 + 106147366 AGCD01072246;GBBH01083083;XR_001232219 MODEL 9030983 protein-coding Sncaip synuclein alpha interacting protein ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN dopamine metabolic process (ortholog); regulation of inclusion body assembly (ortholog); regulation of neurotransmitter secretion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955521 410270 548691 + 102006601 AGCD01068137;AGCD01068138;AGCD01068139;GBCE01085088;XM_005409289;XM_005409291;XM_005409292;XM_005409293;XM_005409294;XM_005409297;XM_005409299;XM_005409301;XM_013507091 XP_005409346;XP_005409348;XP_005409349;XP_005409350;XP_005409351;XP_005409354;XP_005409356;XP_005409358;XP_013362545 MODEL 8999303 protein-coding Glyr1 glyoxylate reductase 1 homolog ENCODES a protein that exhibits chromatin binding (ortholog); chromatin-protein adaptor activity (ortholog); DNA binding (ortholog); INVOLVED IN transcription elongation-coupled chromatin remodeling (ortholog); transcription initiation-coupled chromatin remodeling (ortholog); ASSOCIATED WITH atrioventricular septal defect (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleoplasm (ortholog) NW_004955442 12654805 12694090 + 102030006 AGCD01037743;AGCD01037744;AGCD01037745;GBDI01113542;XM_005391261;XM_005391262;XM_005391263;XM_005391264 XP_005391318;XP_005391319;XP_005391320;XP_005391321 MODEL 9006037 protein-coding LOC102003590 olfactory receptor 1361-like NW_004955442 14147658 14149906 - 102003590 AGCD01037802;XM_013517700 XP_013373154 MODEL 8768659 protein-coding Thap12 THAP domain containing 12 ASSOCIATED WITH Familial Prostate Cancer (ortholog); Hereditary Adrenocortical Carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955414 15539135 15560664 + 102019794 AGCD01015186;AGCD01015187;GBCB01039699;GBDK01238164;XM_005379872 XP_005379929 MODEL 8782956 protein-coding Ybx1 Y-box binding protein 1 ENCODES a protein that exhibits C5-methylcytidine-containing RNA reader activity (ortholog); chromatin binding (ortholog); GTPase binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); CRD-mediated mRNA stabilization (ortholog); epidermis development (ortholog); PARTICIPATES IN cisplatin drug pathway; p53 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN CRD-mediated mRNA stability complex (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) NW_004955537 2234052 2254528 + 102016420 AGCD01070920;AGCD01070921;GBBH01004351;GBCQ01008012;XM_005410716 XP_005410773 MODEL 9029130 protein-coding Dnai3 dynein axonemal intermediate chain 3 ENCODES a protein that exhibits Arp2/3 complex binding (ortholog); INVOLVED IN negative regulation of Arp2/3 complex-mediated actin nucleation (ortholog); negative regulation of cell migration (ortholog); positive regulation of osteoblast differentiation (ortholog); ASSOCIATED WITH Encephalocele (ortholog); esophageal cancer (ortholog); stomach cancer (ortholog); FOUND IN axonemal dynein complex (ortholog); cytoplasm (ortholog) NW_004955423 8870877 8928070 - 102025701 AGCD01023645;GBBH01089896;XM_005385141 XP_005385198 MODEL 9020184 pseudo LOC102018882 microtubule-associated protein RP/EB family member 1 pseudogene NW_004955403 4209027 4215282 + 102018882 AGCD01001781 MODEL 39131568 protein-coding H1-1 H1.1 linker histone, cluster member 8844528 protein-coding Nsmf NMDA receptor synaptonuclear signaling and neuronal migration factor ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to electrical stimulus (ortholog); cellular response to gonadotropin stimulus (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); carcinoma (ortholog); FOUND IN apical dendrite (ortholog); cortical cytoskeleton (ortholog); cytoplasm (ortholog) NW_004955513 5368384 5376480 - 102003367 AGCD01066968;AGCD01066969;GBBH01227293;GBDI01081736;XM_013506661 XP_013362115 MODEL 8801279 protein-coding Slamf9 SLAM family member 9 INVOLVED IN defense response to bacterium (ortholog); plasmacytoid dendritic cell chemotaxis (ortholog); plasmacytoid dendritic cell differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cell surface (ortholog) NW_004955468 11745694 11771376 - 102012304 AGCD01052137;AGCD01052138;AGCD01052139;GBDJ01323839;XM_013522438 XP_013377892 MODEL 8735895 protein-coding Sav1 salvador family WW domain containing protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein serine/threonine kinase activator activity (ortholog); transcription regulator activator activity (ortholog); INVOLVED IN hair follicle development (ortholog); hippo signaling (ortholog); intestinal epithelial cell differentiation (ortholog); ASSOCIATED WITH colonic disease (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955409 12200721 12221520 + 102021738 AGCD01009541;GBCE01118906;GBDK01129269;XM_005376820 XP_005376877 MODEL 8981777 protein-coding LOC102014224 serotriflin-like NW_004955411 8272227 8279483 + 102014224 AGCD01011722;AGCD01011723;AGCD01011724;GBBH01225617;XM_005377929 XP_005377986 MODEL 39132673 snrna U6 U6 spliceosomal RNA 8702169 protein-coding Ltb4r leukotriene B4 receptor ENCODES a protein that exhibits leukotriene B4 receptor activity (ortholog); leukotriene receptor activity (ortholog); INVOLVED IN signal transduction (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH otitis media; Anaphylaxis (ortholog); arteriosclerosis (ortholog) NW_004955409 35984757 35991492 - 102003215 AGCD01010438;GBBH01214872;XM_005377015;XM_005377016 XP_005377072;XP_005377073 MODEL 8932356 protein-coding Sct secretin ENCODES a protein that exhibits digestive hormone activity (ortholog); G protein-coupled receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); dentate gyrus development (ortholog); diet induced thermogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); choledochal cyst (ortholog); polycystic ovary syndrome (ortholog); FOUND IN extracellular region (ortholog) NW_004955476 11433857 11434662 + 102011984 AGCD01055458;GBDF01151931;XM_005401907 XP_005401964 MODEL 39131941 snrna U1 U1 spliceosomal RNA 8728093 pseudo LOC102003912 S-phase kinase-associated protein 1 pseudogene NW_004955442 6806797 6817973 + 102003912 AGCD01037597;AGCD01037598;AGCD01037599 MODEL 8795534 pseudo LOC102010711 probable ATP-dependent RNA helicase DDX41 pseudogene NW_004955502 1434 3248 + 102010711 AGCD01064229 MODEL 8952132 pseudo LOC102009895 DNA damage-regulated autophagy modulator protein 2 pseudogene NW_004955446 16745148 16746679 - 102009895 AGCD01040349 MODEL 8976625 protein-coding Fktn fukutin ENCODES a protein that exhibits phosphotransferase activity, for other substituted phosphate groups (ortholog); INVOLVED IN basement membrane organization (ortholog); brain development (ortholog); cerebellar cortex development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2L (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2M (ortholog); FOUND IN catalytic complex (ortholog); cis-Golgi network (ortholog); cytoplasm (ortholog) NW_004955419 20933662 20994793 - 102028090 AGCD01020258;AGCD01020259;AGCD01020260;AGCD01020261;AGCD01020262;GBCE01181662;XM_005382776;XM_013513225 XP_005382833;XP_013368679 MODEL 39131366 protein-coding DYTN dystrotelin 8906226 protein-coding Rab4b RAB4B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN D-glucose import across plasma membrane (ortholog); early endosome to Golgi transport (ortholog); endosomal vesicle fusion (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN early endosome membrane (ortholog); insulin-responsive compartment (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955578 559029 568966 - 102004532 AGCD01075489;GBDI01109935;XM_005414016;XM_005414017;XM_005414018;XM_013509647;XR_001232465;XR_265084 XP_005414073;XP_005414074;XP_005414075;XP_013365101 MODEL 8999716 protein-coding LOC102019302 olfactory receptor 8K5-like NW_004955511 1415677 1416615 + 102019302 AGCD01066366;XM_005408231 XP_005408288 MODEL 8845780 protein-coding LOC102013056 olfactory receptor 6C74 NW_004955458 2437549 2438499 - 102013056 AGCD01047233;XM_005397240 XP_005397297 MODEL 8951396 protein-coding Lmbrd2 LMBR1 domain containing 2 INVOLVED IN adrenergic receptor signaling pathway (ortholog); ASSOCIATED WITH body dysmorphic disorder (ortholog); cerebral palsy (ortholog); cervical cancer (ortholog) NW_004955426 20928323 20972371 - 102010820 AGCD01026576;GBDI01384158;XM_005386204;XM_005386205 XP_005386261;XP_005386262 MODEL 8796399 protein-coding Top3a DNA topoisomerase III alpha ENCODES a protein that exhibits DNA topoisomerase type I (single strand cut, ATP-independent) activity (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN chromosome separation (ortholog); DNA topological change (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 5 (ortholog); Breast Cancer, Familial (ortholog); Cardiomegaly (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); PML body (ortholog) NW_004955478 11015378 11045717 + 102020114 AGCD01056157;GBDF01128087;XM_005402278;XM_005402279 XP_005402335;XP_005402336 MODEL 8761090 ncrna LOC102005347 uncharacterized LOC102005347 NW_004955411 1520955 1525362 + 102005347 AGCD01011485;GBDF01208789;XR_259910 MODEL 8846231 protein-coding Tdrd3 tudor domain containing 3 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3 reader activity (ortholog); histone H4 reader activity (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); DNA topoisomerase III-beta-TDRD3 complex (ortholog) NW_004955404 44329159 44457958 - 102004032 AGCD01004420;AGCD01004421;GBCE01045841;XM_005374205;XM_005374206;XM_005374207;XM_013516689 XP_005374262;XP_005374263;XP_005374264;XP_013372143 MODEL 8728342 ncrna LOC102012697 uncharacterized LOC102012697 NW_004955445 18404493 18440417 + 102012697 AGCD01039904;GBDF01229799;XR_262357 MODEL 8830561 protein-coding Brd4 bromodomain containing 4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); chromatin remodeling (ortholog); chromosome segregation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alopecia (ortholog); autosomal dominant intellectual developmental disorder 23 (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); condensed nuclear chromosome (ortholog) NW_004955495 7959033 7989216 + 102009518 AGCD01062173;GBDF01154291;XM_013505125 XP_013360579 MODEL 39133059 snrna U6 U6 spliceosomal RNA 8875988 pseudo LOC102023241 pre-mRNA-splicing regulator WTAP-like NW_004955411 32294790 32295591 + 102023241 AGCD01012301 MODEL 8856765 protein-coding Kif27 kinesin family member 27 INVOLVED IN cilium assembly (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ventricular system development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cilium (ortholog) NW_004955432 3298427 3441116 + 102007686 AGCD01030647;AGCD01030648;AGCD01030649;AGCD01030650;AGCD01030651;AGCD01030652;AGCD01030653;AGCD01030654;AGCD01030655;AGCD01030656;AGCD01030657;AGCD01030658;AGCD01030659;AGCD01030660;AGCD01030661;AGCD01030662;GBBH01213959;XM_005387948;XM_005387957;XM_013515989;XM_013515990;XM_013515991;XM_013515992;XM_013515993;XM_013515994;XM_013515995;XM_013515996;XM_013515997 XP_005388005;XP_005388014;XP_013371443;XP_013371444;XP_013371445;XP_013371446;XP_013371447;XP_013371448;XP_013371449;XP_013371450;XP_013371451 MODEL 8860302 pseudo LOC102020348 nucleophosmin pseudogene NW_004955492 6061344 6066275 + 102020348 AGCD01060762 MODEL 9020692 protein-coding F3 coagulation factor III, tissue factor ENCODES a protein that exhibits phospholipid binding (ortholog); protease binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN activation of blood coagulation via clotting cascade (ortholog); activation of plasma proteins involved in acute inflammatory response (ortholog); blood coagulation (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular matrix (ortholog) NW_004955423 254060 264448 + 102008007 AGCD01023411;GBDJ01075489;XM_005384995 XP_005385052 MODEL 8828792 protein-coding Ttc32 tetratricopeptide repeat domain 32 ASSOCIATED WITH cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955469 2461559 2466793 - 102011105 AGCD01052276;GBDF01194304;XM_005400338 XP_005400395 MODEL 8979836 protein-coding Slc25a39 solute carrier family 25 member 39 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); glutathione transmembrane transporter activity (ortholog); INVOLVED IN cellular response to iron ion (ortholog); glutathione import into mitochondrion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955451 17352853 17356466 - 102012272 AGCD01043743;AGCD01043744;GBDI01005619;GBDJ01010093;XM_013519261 XP_013374715 MODEL 8860859 ncrna LOC102014225 uncharacterized LOC102014225 NW_004955465 9702260 9741251 - 102014225 AGCD01050495;GBDK01058628;XR_001236719;XR_263262 MODEL 8837185 protein-coding Gemin4 gem nuclear organelle associated protein 4 ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); INVOLVED IN spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); cataract (ortholog); neurodevelopmental disorder with microcephaly, cataracts, and renal abnormalities (ortholog); FOUND IN Cajal body (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955481 2294406 2301297 - 102026638 AGCD01056873;GBBH01131697;XM_005402640 XP_005402697 MODEL 8704490 protein-coding Lcat lecithin-cholesterol acyltransferase ENCODES a protein that exhibits 1-alkyl-2-acetylglycerophosphocholine esterase activity (ortholog); A2-type glycerophospholipase activity (ortholog); apolipoprotein A-I binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); cholesterol transport (ortholog); PARTICIPATES IN reverse cholesterol transport pathway; ASSOCIATED WITH arteriosclerosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); diabetes mellitus (ortholog); FOUND IN extracellular region (ortholog); high-density lipoprotein particle (ortholog) NW_004955484 8772692 8776122 + 102017239 AGCD01058396;GBDF01235122;XM_005403602;XM_013503882 XP_005403659;XP_013359336 MODEL 8799081 ncrna LOC102009475 uncharacterized LOC102009475 NW_004955463 254981 270114 + 102009475 AGCD01049479;GBDF01303373;XR_263138 MODEL 8886977 protein-coding Slitrk5 SLIT and NTRK like family member 5 INVOLVED IN adult behavior (ortholog); axonogenesis (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); obsessive-compulsive disorder (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog); signaling receptor complex (ortholog) NW_004955404 21342379 21350803 - 102004347 AGCD01003724;GBDK01424009;XM_005374119;XM_005374120 XP_005374176;XP_005374177 MODEL 9042402 protein-coding Ildr1 immunoglobulin like domain containing receptor 1 ENCODES a protein that exhibits high-density lipoprotein particle receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); epithelial structure maintenance (ortholog); positive regulation of peptide hormone secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); angiokeratoma (ortholog); aortic aneurysm (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955427 21304460 21333170 - 102007792 AGCD01027440;GBCQ01175397;XM_005386503;XM_013515104;XM_013515105;XM_013515106;XM_013515107;XM_013515108;XM_013515109 XP_005386560;XP_013370558;XP_013370559;XP_013370560;XP_013370561;XP_013370562;XP_013370563 MODEL 10191111 pseudo LOC102018079 Ig heavy chain V-I region 5-like NW_004955470 851205 851707 - 102018079 AGCD01052624 MODEL 8831559 protein-coding Flacc1 flagellum associated containing coiled-coil domains 1 ASSOCIATED WITH anthracosis (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); outer dense fiber (ortholog) NW_004955403 264969 321370 + 102021407 AGCD01001685;AGCD01001686;AGCD01001687;AGCD01001688;GBDK01061068;XM_005373202;XM_013511720;XM_013511724;XM_013511729 XP_005373259;XP_013367174;XP_013367178;XP_013367183 MODEL 153211021 protein-coding LCE7A late cornified envelope 7A 8815560 protein-coding Tasor transcription activation suppressor ENCODES a protein that exhibits chromatin binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN anterior/posterior axis specification, embryo (ortholog); constitutive heterochromatin formation (ortholog); mesodermal to mesenchymal transition involved in gastrulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN chromosome (ortholog); heterochromatin (ortholog); HUSH complex (ortholog) NW_004955430 6440655 6480956 - 102004306 AGCD01029292;AGCD01029293;AGCD01029294;AGCD01029295;AGCD01029296;GBBH01227717;GBDI01138171;XM_013515613;XM_013515614 XP_013371067;XP_013371068 MODEL 8894385 protein-coding Rab5a RAB5A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GDP-dissociation inhibitor binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); canonical Wnt signaling pathway (ortholog); early endosome to late endosome transport (ortholog); PARTICIPATES IN autophagy pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); Myocardial Ischemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); axon terminus (ortholog) NW_004955430 11991548 12040003 + 102004840 AGCD01029472;AGCD01029473;GBDF01119494;XM_005387462;XM_013515692 XP_005387519;XP_013371146 MODEL 8844765 protein-coding LOC102007982 cytochrome P450 2D17-like NW_004955413 27521610 27655636 - 102007982 AGCD01014511;AGCD01014512;AGCD01014513;AGCD01014514;AGCD01014515;AGCD01014516;AGCD01014517;AGCD01014518;AGCD01014519;AGCD01014520;AGCD01014521;AGCD01014522;AGCD01014523;AGCD01014524;AGCD01014525;AGCD01014526;AGCD01014527;AGCD01014528;AGCD01014529;GBDI01255784;XM_013511457;XM_013511458;XM_013511459;XR_001232980 XP_013366911;XP_013366912;XP_013366913 MODEL 8915713 protein-coding LOC102021470 olfactory receptor 8H1-like NW_004955511 5092184 5093131 + 102021470 AGCD01066548;XM_005408085 XP_005408142 MODEL 8821379 protein-coding LOC102016161 olfactory receptor 2T33-like NW_004955418 30651317 30652267 + 102016161 AGCD01019539;XM_013512885 XP_013368339 MODEL 10106014 ncrna LOC106147367 uncharacterized LOC106147367 NW_004955547 1807433 1810934 + 106147367 AGCD01072247;GBDF01058544;XR_001232220 MODEL 8705945 protein-coding LOC102012698 zinc finger protein 709-like NW_004955569 603589 617354 + 102012698 AGCD01074601;AGCD01074602;XM_013509369 XP_013364823 MODEL 39132674 snrna U6 U6 spliceosomal RNA 39132870 snrna U5 U5 spliceosomal RNA 9017910 pseudo LOC102003591 etoposide-induced protein 2.4 homolog pseudogene NW_004955442 5873690 5874760 - 102003591 AGCD01037571 MODEL 8793514 protein-coding LOC102022181 taste receptor type 2 member 13-like NW_004955413 7940665 7941612 + 102022181 AGCD01013838;XM_013511293 XP_013366747 MODEL 39131942 snrna U1 U1 spliceosomal RNA 8972647 protein-coding Sctr secretin receptor ENCODES a protein that exhibits peptide binding (ortholog); peptide hormone binding (ortholog); secretin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); diet induced thermogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasmic microtubule (ortholog); plasma membrane (ortholog) NW_004955459 10192449 10270483 + 102020770 AGCD01048181;AGCD01048182;AGCD01048183;AGCD01048184;GBDF01222090;XM_005397666;XM_005397668;XM_005397669;XM_005397670;XM_005397671;XM_013521062;XM_013521063 XP_005397723;XP_005397725;XP_005397726;XP_005397727;XP_005397728;XP_013376516;XP_013376517 MODEL 9003008 protein-coding LOC102010712 huntingtin-interacting protein M-like NW_004955503 3419013 3419370 - 102010712 AGCD01064627;GBDF01001006;GBDK01096844;XM_013505852 XP_013361306 MODEL 39132824 snrna U6 U6 spliceosomal RNA 8989734 protein-coding Dytn dystrotelin ASSOCIATED WITH cervical cancer (ortholog); pancreatic adenocarcinoma (ortholog); thymoma (ortholog) NW_004955457 8269960 8332498 + 102027494 AGCD01046907;GBDF01273348;XM_013520662 XP_013376116 MODEL 8814863 pseudo LOC102004651 protein ELYS-like NW_004955443 9345582 9368751 - 102004651 AGCD01038349;AGCD01038350;AGCD01038351;AGCD01038352 MODEL 8881952 protein-coding LOC102009896 transmembrane protease serine 11F NW_004955447 4757521 4834971 + 102009896 AGCD01040733;GBDF01305457;XM_005392827 XP_005392884 MODEL 8854352 protein-coding Slitrk6 SLIT and NTRK like family member 6 INVOLVED IN adult locomotory behavior (ortholog); auditory behavior (ortholog); auditory receptor cell morphogenesis (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN cell periphery (ortholog); cell surface (ortholog); plasma membrane (ortholog) NW_004955404 22738080 22744601 + 102005659 AGCD01003774;GBDK01060369;XM_005374121 XP_005374178 MODEL 9038660 protein-coding H1-1 H1.1 linker histone, cluster member ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); heparin binding (ortholog); INVOLVED IN chromosome condensation (ortholog); positive regulation of receptor-mediated endocytosis (ortholog); spermatogenesis (ortholog); FOUND IN cell surface (ortholog); chromatin (ortholog); chromosome (ortholog) NW_004955483 996019 1008034 + 102025362 AGCD01057638;GBDF01119907;XM_005403325;XM_005403326;XR_001231010 XP_005403382;XP_005403383 MODEL 8930000 protein-coding Syngr3 synaptogyrin 3 ENCODES a protein that exhibits SH2 domain binding (ortholog); INVOLVED IN regulated exocytosis (ortholog); regulation of neurotransmitter uptake (ortholog); regulation of synaptic vesicle priming (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN neuromuscular junction (ortholog); synapse (ortholog); synaptic vesicle (ortholog) NW_004955442 15273597 15277740 - 102010098 AGCD01037862;GBBH01140110;GBDJ01403115;XM_005391482 XP_005391539 MODEL 8805269 protein-coding Ltb4r2 leukotriene B4 receptor 2 ENCODES a protein that exhibits leukotriene B4 receptor activity (ortholog); INVOLVED IN keratinocyte migration (ortholog); signal transduction (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955409 35989425 35991492 - 102018478 AGCD01010438;XM_013510397 XP_013365851 MODEL 9019446 protein-coding Flad1 flavin adenine dinucleotide synthetase 1 ENCODES a protein that exhibits FAD diphosphatase activity (ortholog); FMN adenylyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN FAD biosynthetic process (ortholog); PARTICIPATES IN riboflavin metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955545 1487929 1495808 + 102017387 AGCD01071856;AGCD01071857;GBDF01155147;XM_005411537;XM_005411538;XM_013508294 XP_005411594;XP_005411595;XP_013363748 MODEL 8955413 protein-coding LOC102020351 myb-like protein X NW_004955422 19494472 19511742 + 102020351 AGCD01023011;AGCD01023012;AGCD01023013;GBDI01385675;XM_005384968;XM_013513852 XP_005385025;XP_013369306 MODEL 8992992 protein-coding Cys1 cystin 1 ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN inner ear development (ortholog); kidney development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); polycystic kidney disease (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cytosol (ortholog) NW_004955487 5455820 5461362 - 102027752 AGCD01059333;AGCD01059334;GBBH01180330;GBCQ01098223;XM_013504397 XP_013359851 MODEL 8790990 protein-coding Thap2 THAP domain containing 2 ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955405 11647989 11665110 + 102003723 AGCD01004835;XM_013517628 XP_013373082 MODEL 39132099 snrna U6 U6 spliceosomal RNA 8806755 protein-coding LOC102014231 interferon lambda-4-like NW_004955468 295047 309275 - 102014231 AGCD01051688;AGCD01051689;XM_013522287 XP_013377741 MODEL 8912011 pseudo LOC102012703 transmembrane protease serine 11E-like NW_004955447 5103263 5144409 + 102012703 AGCD01040741;AGCD01040742;AGCD01040743 MODEL 8969041 pseudo LOC102025391 synapse-associated protein 1 pseudogene NW_004955529 271045 272081 - 102025391 AGCD01069627 MODEL 8767910 ncrna LOC102019303 uncharacterized LOC102019303 NW_004955513 1028739 1031639 - 102019303 AGCD01066838;GBCB01080479;XR_001231742 MODEL 8947989 protein-coding Nsrp1 nuclear speckle splicing regulatory protein 1 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN developmental process (ortholog); in utero embryonic development (ortholog); positive regulation of adipose tissue development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955481 3142009 3192060 - 102006456 AGCD01056894;AGCD01056895;GBDK01195556;XM_005402665;XM_005402666;XM_013503523 XP_005402722;XP_005402723;XP_013358977 MODEL 8991424 pseudo LOC102005348 60S ribosomal protein L9-like NW_004955464 13057600 13058278 + 102005348 AGCD01050255 MODEL 8787801 protein-coding Top3b DNA topoisomerase III beta ENCODES a protein that exhibits RNA topoisomerase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN condensed chromosome (ortholog); DNA topoisomerase III-beta-TDRD3 complex (ortholog); nucleus (ortholog) NW_004955442 17201079 17223824 + 102011701 AGCD01037946;GBBH01143487;XM_005391689;XM_005391690;XM_005391691;XM_005391692;XM_005391693;XM_013517987 XP_005391746;XP_005391747;XP_005391748;XP_005391749;XP_005391750;XP_013373441 MODEL 8848632 protein-coding Lmcd1 LIM and cysteine rich domains 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); regulation of cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); coronary stenosis (ortholog); FOUND IN nucleus (ortholog) NW_004955561 151315 213904 + 102025852 AGCD01073819;GBCE01030182;XM_005412996;XM_013509111 XP_005413053;XP_013364565 MODEL 8802981 protein-coding Gm2a GM2 ganglioside activator ENCODES a protein that exhibits beta-N-acetylgalactosaminidase activity (ortholog); beta-N-acetylhexosaminidase activity (ortholog); enzyme activator activity (ortholog); INVOLVED IN ganglioside catabolic process (ortholog); ganglioside metabolic process (ortholog); learning or memory (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); GM2 gangliosidosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955408 2442406 2449426 - 102013695 AGCD01008006;GBCB01075592;GBCE01028873;XM_013508167 XP_013363621 MODEL 8897861 protein-coding Tdrd5 tudor domain containing 5 INVOLVED IN P granule organization (ortholog); spermatid development (ortholog); transposable element silencing by piRNA-mediated DNA methylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromatoid body (ortholog); pi-body (ortholog); synapse (ortholog) NW_004955406 18895010 18961200 + 102005220 AGCD01006070;GBDF01154225;XM_013521209;XM_013521211;XM_013521214;XM_013521219;XM_013521222;XR_001236523 XP_013376663;XP_013376665;XP_013376668;XP_013376673;XP_013376676 MODEL 8867124 protein-coding LOC102007986 tripartite motif-containing protein 5-like NW_004955414 21541749 21555056 - 102007986 AGCD01015423;GBCQ01013376;XM_005380093;XM_013512002;XM_013512004 XP_005380150;XP_013367456;XP_013367458 MODEL 8854048 protein-coding Rab5b RAB5B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP-dependent protein binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); endocytosis (ortholog); endosomal transport (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); esotropia (ortholog); lung cancer (ortholog); FOUND IN early endosome membrane (ortholog); endocytic vesicle (ortholog); endosome (ortholog) NW_004955458 3563363 3582620 + 102026402 AGCD01047320;AGCD01047321;AGCD01047322;AGCD01047323;AGCD01047324;GBCB01000783;GBDF01126202;XM_013520906 XP_013376360 MODEL 8927468 protein-coding Sncb synuclein beta ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); calcium ion binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); dopamine metabolic process (ortholog); negative regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH acute megakaryocytic leukemia (ortholog); Alzheimer's disease (ortholog); autistic disorder (ortholog); FOUND IN axon terminus (ortholog); growth cone (ortholog); inclusion body (ortholog) NW_004955408 28894204 28903095 - 102015380 AGCD01008733;GBDI01245052;XM_005376395 XP_005376452 MODEL 8832511 protein-coding Lck LCK proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits antigen binding (ortholog); ATPase binding (ortholog); CD4 receptor binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); CD27 signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic conjunctivitis (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); endocytic vesicle (ortholog) NW_004955452 10608317 10632310 + 102019766 AGCD01044281;AGCD01044282;AGCD01044283;GBDJ01388405;XM_005395058;XM_005395059 XP_005395115;XP_005395116 MODEL 8701375 protein-coding Tasor2 transcription activation suppressor family member 2 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of gene expression, epigenetic (ortholog); negative regulation of type I interferon production (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); cytosol (ortholog) NW_004955421 22381295 22448115 + 102025253 AGCD01022134;AGCD01022135;AGCD01022136;GBDF01085789;XM_005383842;XM_005383843;XM_005383844;XM_005383845;XM_005383846;XM_005383847;XM_013513662;XM_013513663;XM_013513664 XP_005383899;XP_005383900;XP_005383901;XP_005383902;XP_005383903;XP_005383904;XP_013369116;XP_013369117;XP_013369118 MODEL 8798140 pseudo LOC102003915 SAFB-like transcription modulator NW_004955445 12049621 12053924 - 102003915 AGCD01039731 MODEL 8718061 protein-coding LOC102021471 secretoglobin family 1D member-like NW_004955511 6342089 6346015 + 102021471 AGCD01066602;GBCB01129881;XM_013506417 XP_013361871 MODEL 8725473 protein-coding F5 coagulation factor V INVOLVED IN blood circulation (ortholog); blood coagulation (ortholog); proteolysis (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); blood coagulation disease (ortholog); brain ischemia (ortholog); FOUND IN extracellular region (ortholog); platelet alpha granule (ortholog) NW_004955462 7695004 7757832 + 102012615 AGCD01049309;GBBH01073086;XM_005398188 XP_005398245 MODEL 8797604 protein-coding Kif28 Kinesin-like protein KIF28P INVOLVED IN mitochondrion organization (ortholog); organelle transport along microtubule (ortholog); FOUND IN mitochondrial membrane (ortholog) NW_004955406 9618041 9687626 - 102011836 AGCD01005829;AGCD01005830;AGCD01005831;GBCC01020699;XM_005374794 XP_005374851 MODEL 8802237 protein-coding Dnai4 dynein axonemal intermediate chain 4 INVOLVED IN axonemal dynein complex assembly (ortholog); cilium movement (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN axonemal dynein complex (ortholog); axoneme (ortholog); motile cilium (ortholog) NW_004955423 24027924 24089914 + 102018507 AGCD01024028;AGCD01024029;AGCD01024030;GBBH01032835;GBDI01017375;XM_013514439 XP_013369893 MODEL 8987533 protein-coding Ybx2 Y-box binding protein 2 ENCODES a protein that exhibits chromatin binding (ortholog); lipid binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN mRNA stabilization (ortholog); negative regulation of translation (ortholog); oocyte development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); ribonucleoprotein complex (ortholog) NW_004955467 9624506 9629904 + 102008613 AGCD01051520;GBDF01004444;XM_013522114;XM_013522115;XM_013522116;XM_013522117;XM_013522118 XP_013377568;XP_013377569;XP_013377570;XP_013377571;XP_013377572 MODEL 9009375 protein-coding Slc25a4 solute carrier family 25 member 4 ENCODES a protein that exhibits ADP transmembrane transporter activity (ortholog); ATP:ADP antiporter activity (ortholog); enzyme binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); ADP transport (ortholog); apoptotic mitochondrial changes (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH alcoholic cardiomyopathy (ortholog); Alzheimer's disease (ortholog); autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 2 (ortholog); FOUND IN membrane (ortholog); membrane raft (ortholog); mitochondrial inner membrane (ortholog) NW_004955403 23878329 23882322 - 102003079 AGCD01002262;AGCD01002263;GBCB01005621;XM_005373479 XP_005373536 MODEL 8765168 pseudo LOC102018885 histone H2A.Z pseudogene NW_004955452 16500190 16501449 + 102018885 AGCD01044514;XM_005395228;XM_005395229 MODEL 8880648 protein-coding LOC102013057 interferon-inducible GTPase 1-like NW_004955408 2302552 2307297 - 102013057 AGCD01008003;GBDJ01001366;XM_013507347 XP_013362801 MODEL 8891276 protein-coding Gemin5 gem nuclear organelle associated protein 5 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); ribosome binding (ortholog); RNA 7-methylguanosine cap binding (ortholog); INVOLVED IN regulation of translation (ortholog); spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) NW_004955408 9136490 9179087 - 102008600 AGCD01008235;AGCD01008236;GBDF01122245;XM_005376211;XM_005376212;XM_013508713 XP_005376268;XP_005376269;XP_013364167 MODEL 9068178 pseudo LOC102018080 olfactory receptor 51F2-like NW_004955414 20321335 20322268 + 102018080 AGCD01015368 MODEL 10265739 protein-coding Rab5c RAB5C, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTPase activity (ortholog); INVOLVED IN endocytosis (ortholog); endosomal transport (ortholog); endosome organization (ortholog); ASSOCIATED WITH angiokeratoma (ortholog); autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 41 (ortholog); FOUND IN endocytic vesicle (ortholog); endosome (ortholog); exocytic vesicle (ortholog) NW_004955451 16200442 16215583 - 106146228 AGCD01043660;GBCQ01075012;XM_005394449 XP_005394506 MODEL 39132825 snrna U6 U6 spliceosomal RNA 8795904 protein-coding Saxo1 stabilizer of axonemal microtubules 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN cellular response to cold (ortholog); cold acclimation (ortholog); positive regulation of cilium assembly (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN axonemal microtubule (ortholog); centriole (ortholog); ciliary basal body (ortholog) NW_004955434 21414937 21454901 - 102024607 AGCD01032628;GBDF01003678;XM_005388724;XM_013516288 XP_005388781;XP_013371742 MODEL 8858369 protein-coding Ildr2 immunoglobulin like domain containing receptor 2 INVOLVED IN cell differentiation (ortholog); homeostasis of number of cells within a tissue (ortholog); insulin secretion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nucleus (ortholog); tight junction (ortholog) NW_004955462 9953393 10016339 + 102030613 AGCD01049346;AGCD01049347;AGCD01049348;AGCD01049349;AGCD01049350;GBCE01147847;GBDF01303897;XM_013521459 XP_013376913 MODEL 8765802 protein-coding Slbp stem-loop histone mRNA binding protein ENCODES a protein that exhibits histone pre-mRNA stem-loop binding (ortholog); identical protein binding (ortholog); mRNA binding (ortholog); INVOLVED IN cap-dependent translational initiation (ortholog); mRNA 3'-end processing by stem-loop binding and cleavage (ortholog); mRNA transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); coloboma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); histone mRNA stem-loop binding complex (ortholog) NW_004955514 954489 968670 - 102016626 AGCD01067028;GBDF01000480;XM_005408703;XM_013506819;XM_013506820;XM_013506821 XP_005408760;XP_013362273;XP_013362274;XP_013362275 MODEL 39133060 snrna U6 U6 spliceosomal RNA 8877860 protein-coding Brd7 bromodomain containing 7 ENCODES a protein that exhibits histone binding (ortholog); histone H3K14ac reader activity (ortholog); p53 binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of mitotic cell cycle (ortholog); PARTICIPATES IN histone modification pathway; SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955433 8425976 8462431 - 102008761 AGCD01031593;AGCD01031594;GBBH01166493;GBCB01024456;XM_013516217 XP_013371671 MODEL 8993713 ncrna LOC102023242 uncharacterized LOC102023242 NW_004955465 3870352 3871548 - 102023242 AGCD01050394;GBCE01079619;XR_263235 MODEL 8995841 protein-coding LOC102016162 histone H2B type 1-H NW_004955483 784433 784869 - 102016162 AGCD01057630;XM_013503795 XP_013359249 MODEL 10359868 ncrna LOC106147368 uncharacterized LOC106147368 NW_004955547 1628639 1630325 - 106147368 AGCD01072234;GBCQ01046862;XR_001232224 MODEL 8905819 protein-coding Syngr4 synaptogyrin 4 ASSOCIATED WITH Breast Cancer, Familial (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955559 2090259 2096871 - 102011368 AGCD01073691;GBDK01027658;XM_005412956;XM_005412957;XM_013509043;XM_013509044 XP_005413013;XP_005413014;XP_013364497;XP_013364498 MODEL 39132874 snrna U5 U5 spliceosomal RNA 8820361 ncrna LOC102009476 uncharacterized LOC102009476 NW_004955463 10007303 10028051 - 102009476 AGCD01049804;AGCD01049805;GBDF01223582;XR_263166 MODEL 39131943 snrna U1 U1 spliceosomal RNA 8757659 protein-coding Flcn folliculin ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); GTPase activator activity (ortholog); INVOLVED IN cell-cell junction assembly (ortholog); cellular response to amino acid starvation (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Birt-Hogg-Dube syndrome (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell-cell contact zone (ortholog); centrosome (ortholog); cilium (ortholog) NW_004955577 672774 694140 + 102019651 AGCD01075409;AGCD01075410;GBCE01099409;XM_005413976;XM_005413977;XM_005413978 XP_005414033;XP_005414034;XP_005414035 MODEL 8780782 pseudo LOC102010717 probable ATP-dependent RNA helicase DDX41 NW_004955428 2954658 3061479 + 102010717 AGCD01027644;AGCD01027645;AGCD01027646;AGCD01027647;AGCD01027648 MODEL 39132100 snrna U6 U6 spliceosomal RNA 8910875 protein-coding Thap3 THAP domain containing 3 INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955486 6012557 6018101 - 102024574 AGCD01059101;AGCD01059102;GBBH01207080;GBDI01220594;XM_013504317 XP_013359771 MODEL 8740468 ncrna LOC102014232 uncharacterized LOC102014232 NW_004955470 3643885 3651775 + 102014232 AGCD01052706;GBDF01189926;XR_263467 MODEL 9054134 protein-coding LOC102004653 olfactory receptor 7G2-like NW_004955563 384107 385063 - 102004653 AGCD01074064;XM_005413097 XP_005413154 MODEL 8886399 protein-coding LOC102009898 prolactin-like NW_004955576 934768 939343 + 102009898 AGCD01075348;XM_013509612 XP_013365066 MODEL 8887193 protein-coding Dzank1 double zinc ribbon and ankyrin repeat domains 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog) NW_004955415 26969814 27021767 - 102017120 AGCD01016621;GBDJ01297692;XM_013512227;XM_013512228;XM_013512229 XP_013367681;XP_013367682;XP_013367683 MODEL 39132675 snrna U6 U6 spliceosomal RNA 8764643 ncrna LOC102022184 uncharacterized LOC102022184 NW_004955470 7992536 7997200 - 102022184 AGCD01052816;AGCD01052817;GBDF01304651;XR_263476 MODEL 8973500 protein-coding Nsun2 NOP2/Sun RNA methyltransferase 2 ENCODES a protein that exhibits mRNA (cytidine-5-)-methyltransferase activity (ortholog); tRNA (cytidine-N5)-methyltransferase activity (ortholog); INVOLVED IN hair follicle maturation (ortholog); in utero embryonic development (ortholog); meiotic cell cycle checkpoint signaling (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); extracellular exosome (ortholog) NW_004955504 4339044 4360176 - 102023822 AGCD01064882;GBCB01020574;GBDF01121402;XM_013505896 XP_013361350 MODEL 8827411 protein-coding LOC102020353 olfactory receptor 7G2-like NW_004955495 181711 182661 - 102020353 AGCD01061606;XM_005406116 XP_005406173 MODEL 9023565 protein-coding Gemin6 gem nuclear organelle associated protein 6 INVOLVED IN spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Gemini of Cajal bodies (ortholog) NW_004955441 6456482 6461027 + 102012367 AGCD01036922;GBCQ01122381;XM_005390892;XM_005390893;XM_005390894;XM_005390895;XM_005390896 XP_005390949;XP_005390950;XP_005390951;XP_005390952;XP_005390953 MODEL 9062530 protein-coding H1-2 H1.2 linker histone, cluster member ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); histone H3K27me3 reader activity (ortholog); INVOLVED IN chromatin organization (ortholog); chromosome condensation (ortholog); facultative heterochromatin formation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); FOUND IN chromosome (ortholog); euchromatin (ortholog); heterochromatin (ortholog) NW_004955483 961317 962727 + 102021664 AGCD01057638;GBCE01053961;XM_005403311 XP_005403368 MODEL 9023645 protein-coding LOC102016163 vacuolar fusion protein MON1 homolog B-like NW_004955484 1024204 1028196 + 102016163 AGCD01057913;GBDF01195683;XM_005403432;XM_005403433;XM_013503991 XP_005403489;XP_005403490;XP_013359445 MODEL 8712714 protein-coding Scube1 signal peptide, CUB domain and EGF like domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955413 28339212 28461626 - 102013711 AGCD01014556;AGCD01014557;GBDF01285768;XM_005379668 XP_005379725 MODEL 8772060 protein-coding Ltbp1 latent transforming growth factor beta binding protein 1 ENCODES a protein that exhibits microfibril binding (ortholog); molecular adaptor activity (ortholog); receptor ligand inhibitor activity (ortholog); INVOLVED IN aorta development (ortholog); cellular response to mechanical stimulus (ortholog); cellular response to parathyroid hormone stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Autosomal Recessive Cutis Laxa Type IIE (ortholog); basal cell carcinoma (ortholog); FOUND IN dendrite (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) NW_004955441 1405340 1626668 + 102023637 AGCD01036754;AGCD01036755;AGCD01036756;GBCQ01011811;XM_013517601;XM_013517602;XM_013517603;XM_013517604 XP_013373055;XP_013373056;XP_013373057;XP_013373058 MODEL 8934859 protein-coding Lclat1 lysocardiolipin acyltransferase 1 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); acyltransferase activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955469 12234689 12431951 + 102020999 AGCD01052580;AGCD01052581;GBDK01177327;XM_005400553;XM_005400554;XM_005400555;XM_005400556;XM_013522665;XM_013522666;XM_013522667;XM_013522668 XP_005400610;XP_005400611;XP_005400612;XP_005400613;XP_013378119;XP_013378120;XP_013378121;XP_013378122 MODEL 8864278 protein-coding LOC102021473 lipocalin NW_004955513 4813800 4818133 - 102021473 AGCD01066940;GBBH01225941;XM_005408547 XP_005408604 MODEL 8872427 protein-coding Cysltr1 cysteinyl leukotriene receptor 1 ENCODES a protein that exhibits leukotriene receptor activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH acute asthma (ortholog); Acute Lung Injury (ortholog); allergic asthma (ortholog); FOUND IN plasma membrane (ortholog) NW_004955557 1667518 1702272 - 102022430 AGCD01073303;AGCD01073304;AY462138;GBCE01034656;XM_005412634;XM_005412635 AAR26537;XP_005412691;XP_005412692 MODEL 9061096 pseudo LOC102025392 PDZ domain-containing protein 11 pseudogene NW_004955436 2821151 2821591 + 102025392 AGCD01033614 MODEL 8805875 protein-coding LOC102019312 zinc finger protein 627-like NW_004955524 331603 343440 - 102019312 AGCD01068675;GBDI01011137;XM_005409479 XP_005409536 MODEL 9055526 ncrna LOC102005350 uncharacterized LOC102005350 NW_004955465 6890152 6891671 + 102005350 AGCD01050449;GBCB01123633;XR_263244 MODEL 8917860 protein-coding Slk STE20 like kinase ENCODES a protein that exhibits histone kinase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); cellular response to type II interferon (ortholog); cytoplasmic microtubule organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955485 6617698 6685220 - 102027985 AGCD01058622;AGCD01058623;AGCD01058624;AGCD01058625;GBDF01188499;GBDI01178670;XM_005403794 XP_005403851 MODEL 39132827 snrna U6 U6 spliceosomal RNA 8889828 protein-coding LOC102013060 chromosome-associated kinesin KIF4A-like NW_004955409 19322565 19326894 - 102013060 AGCD01009867;GBDF01046103;XM_005376878 XP_005376935 MODEL 8969637 protein-coding Top6bl TOP6B like initiator of meiotic double strand breaks ENCODES a protein that exhibits DNA secondary structure binding (ortholog); INVOLVED IN meiotic DNA double-strand break formation (ortholog); reciprocal meiotic recombination (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Hydatidiform Mole, Recurrent, 4 (ortholog); lung cancer (ortholog); FOUND IN chromosome (ortholog); DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex (ortholog) NW_004955422 18541350 18726269 - 102019710 AGCD01022951;AGCD01022952;AGCD01022953;AGCD01022954;AGCD01022955;AGCD01022956;AGCD01022957;AGCD01022958;AGCD01022959;AGCD01022960;GBDF01145171;XM_013513887;XM_013513888;XM_013513889;XM_013513890;XM_013513891;XM_013513892;XM_013513893;XM_013513894;XM_013513895;XM_013513896;XM_013513897;XM_013513898;XM_013513899;XM_013513900;XM_013513901;XM_013513902 XP_013369341;XP_013369342;XP_013369343;XP_013369344;XP_013369345;XP_013369346;XP_013369347;XP_013369348;XP_013369349;XP_013369350;XP_013369351;XP_013369352;XP_013369353;XP_013369354;XP_013369355;XP_013369356 MODEL 8707093 ncrna LOC102003597 uncharacterized LOC102003597 NW_004955447 15301309 15312329 + 102003597 AGCD01041045;GBDF01277712;XR_262434 MODEL 39133061 snrna U6 U6 spliceosomal RNA 8750803 protein-coding Saxo2 stabilizer of axonemal microtubules 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955416 12789683 12811159 + 102027637 AGCD01017212;AGCD01017213;GBDF01086244;XM_005381455;XM_005381456;XM_005381457;XM_005381458 XP_005381512;XP_005381513;XP_005381514;XP_005381515 MODEL 8763433 pseudo LOC102003918 stress-induced-phosphoprotein 1-like NW_004955447 5714882 5718387 - 102003918 AGCD01040769 MODEL 8894688 protein-coding Sncg synuclein gamma ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); aggressive behavior (ortholog); cellular response to hydrostatic pressure (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); centrosome (ortholog) NW_004955510 5958276 5961719 + 102011687 AGCD01066297;GBDJ01020114;XM_005407908;XM_013506329 XP_005407965;XP_013361783 MODEL 8862298 protein-coding F7 coagulation factor VII ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); blood coagulation (ortholog); circadian rhythm (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acquired angioedema (ortholog); Acute Liver Failure (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog); protein-containing complex (ortholog) NW_004955404 685170 692797 - 102010860 AGCD01003207;GBCQ01072735;XM_005373970 XP_005374027 MODEL 8853686 protein-coding Synj1 synaptojanin 1 ENCODES a protein that exhibits EH domain binding (ortholog); inositol-1,4,5-trisphosphate 5-phosphatase activity (ortholog); phosphatidylinositol phosphate 5-phosphatase activity (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process (ortholog); inositol trisphosphate metabolic process (ortholog); learning (ortholog); PARTICIPATES IN altered clathrin-dependent synaptic vesicle endocytosis; clathrin-dependent synaptic vesicle endocytosis; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN clathrin coat of coated pit (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) NW_004955407 32094076 32175676 - 102017096 AGCD01007669;GBDI01295468;XM_013504161;XM_013504168;XM_013504171;XM_013504180;XM_013504181;XM_013504183;XM_013504187;XM_013504192;XM_013504196;XM_013504200 XP_013359615;XP_013359622;XP_013359625;XP_013359634;XP_013359635;XP_013359637;XP_013359641;XP_013359646;XP_013359650;XP_013359654 MODEL 8876545 ncrna LOC102012707 uncharacterized LOC102012707 NW_004955584 1044910 1047589 + 102012707 AGCD01075977;GBBH01222868;XR_001232516 MODEL 8705484 protein-coding Ttc33 tetratricopeptide repeat domain 33 NW_004955426 25017351 25075164 - 102024820 AGCD01026701;GBCQ01098236;XM_005386241;XM_005386242 XP_005386298;XP_005386299 MODEL 8904063 protein-coding Slc25a40 solute carrier family 25 member 40 ENCODES a protein that exhibits glutathione transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte development (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955432 5191197 5244587 - 102016941 AGCD01030767;AGCD01030768;AGCD01030769;GBCQ01073228;GBDF01251683;XM_013516045 XP_013371499 MODEL 8999662 ncrna LOC102018084 uncharacterized LOC102018084 NW_004955414 33063328 33066744 - 102018084 AGCD01015795;GBCB01039007;XR_001233137 MODEL 39132101 snrna U6 U6 spliceosomal RNA 8864949 protein-coding Lmf1 lipase maturation factor 1 INVOLVED IN chylomicron remnant clearance (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); glycoprotein biosynthetic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955442 16250131 16360907 + 102013881 AGCD01037893;AGCD01037894;AGCD01037895;AGCD01037896;AGCD01037897;AGCD01037898;GBDJ01272886;XM_005391597 XP_005391654 MODEL 8854453 pseudo LOC102007993 28S ribosomal protein S36, mitochondrial pseudogene NW_004955474 11143140 11143451 - 102007993 AGCD01054611;XM_005401469 MODEL 8835804 protein-coding Gmcl1 germ cell-less 1, spermatogenesis associated ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN nuclear envelope (ortholog); nuclear matrix (ortholog) NW_004955424 15265052 15318445 - 102024818 AGCD01024701;AGCD01024702;AGCD01024703;AGCD01024704;AGCD01024705;GBBH01188155;XM_013514713 XP_013370167 MODEL 8882702 protein-coding Brd8 bromodomain containing 8 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cellular response to thyroid hormone stimulus (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) NW_004955418 2232853 2275812 + 102005259 AGCD01018753;AGCD01018754;GBCE01097970;XM_005382124;XM_005382125;XM_005382126;XM_005382127;XM_005382128;XM_005382129;XM_005382130;XM_013512994;XM_013512995;XM_013512996;XM_013512997 XP_005382181;XP_005382182;XP_005382183;XP_005382184;XP_005382185;XP_005382186;XP_005382187;XP_013368448;XP_013368449;XP_013368450;XP_013368451 MODEL 8813357 protein-coding Tdrd6 tudor domain containing 6 INVOLVED IN germ cell development (ortholog); spermatogenesis (ortholog); spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) NW_004955437 11517094 11531816 + 102006707 AGCD01034574;GBDF01081343;XM_005389858;XM_013516994 XP_005389915;XP_013372448 MODEL 8715794 protein-coding Slc10a1 solute carrier family 10 member 1 ENCODES a protein that exhibits bile acid transmembrane transporter activity (ortholog); bile acid:sodium symporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); cellular response to xenobiotic stimulus (ortholog); response to estrogen (ortholog); ASSOCIATED WITH alcoholic hepatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) NW_004955466 597081 609254 + 102026303 AGCD01050667;GBCB01029096;XM_005399028 XP_005399085 MODEL 10349371 ncrna LOC106147369 uncharacterized LOC106147369 NW_004955547 2426784 2436827 - 106147369 AGCD01072280;GBCB01035729;XR_001232225 MODEL 8795692 protein-coding Slmap sarcolemma associated protein ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of hippo signaling (ortholog); protein localization to plasma membrane (ortholog); regulation of membrane depolarization during cardiac muscle cell action potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Brugada syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); FAR/SIN/STRIPAK complex (ortholog) NW_004955430 7470823 7620101 + 102016939 AGCD01029353;AGCD01029354;AGCD01029355;AGCD01029356;AGCD01029357;AGCD01029358;GBBH01007453;GBDF01076825;XM_005387415 XP_005387472 MODEL 39132879 snrna U5 U5 spliceosomal RNA 8999777 protein-coding Ybx3 Y-box binding protein 3 ENCODES a protein that exhibits DNA binding (ortholog); mRNA 3'-UTR binding (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular hyperosmotic response (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955413 7090085 7111542 + 102020236 AGCD01013798;AGCD01013799;AGCD01013800;GBBH01032211;GBCE01028229;XM_013511652 XP_013367106 MODEL 9052303 protein-coding LOC102022185 olfactory receptor 51H1-like NW_004955414 20166170 20167120 + 102022185 AGCD01015358;XM_013511716 XP_013367170 MODEL 8956145 protein-coding Kif2a kinesin family member 2A ENCODES a protein that exhibits microtubule binding (ortholog); protein serine/threonine kinase binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); dendritic transport (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955446 6244547 6279080 - 102025854 AGCD01040090;AGCD01040091;GBDK01281069;XM_005392643;XM_005392645;XM_005392646 XP_005392700;XP_005392702;XP_005392703 MODEL 9049102 pseudo LOC102009479 60S ribosomal protein L26-like NW_004955466 1763067 1764140 + 102009479 AGCD01050717 MODEL 8961456 protein-coding Nsun3 NOP2/Sun RNA methyltransferase 3 ENCODES a protein that exhibits tRNA (cytidine-N5)-methyltransferase activity (ortholog); INVOLVED IN regulation of mitochondrial translation (ortholog); tRNA wobble base cytosine methylation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 48 (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955407 3322246 3397289 - 102018156 AGCD01006857;AGCD01006858;GBDK01252817;XM_005375515;XM_013503538;XM_013503546;XM_013503551 XP_005375572;XP_013358992;XP_013359000;XP_013359005 MODEL 8826820 protein-coding Gemin8 gem nuclear organelle associated protein 8 INVOLVED IN spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955519 4205660 4228174 + 102021476 AGCD01067981;GBDK01285087;XM_005409185 XP_005409242 MODEL 8716901 protein-coding H1-4 H1.4 linker histone, cluster member ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); ATP binding (ortholog); INVOLVED IN chromatin organization (ortholog); chromosome condensation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN chromosome (ortholog); heterochromatin (ortholog); nuclear speck (ortholog) NW_004955483 870957 871724 - 102018601 AGCD01057634;GBDJ01046421;XM_005403302 XP_005403359 MODEL 8744945 pseudo LOC102016165 casein kinase II subunit alpha-like NW_004955486 552614 556089 + 102016165 AGCD01058861 MODEL 8884473 protein-coding Lcmt1 leucine carboxyl methyltransferase 1 ENCODES a protein that exhibits protein C-terminal carboxyl O-methyltransferase activity (ortholog); protein C-terminal leucine carboxyl O-methyltransferase activity (ortholog); INVOLVED IN negative regulation of protein-containing complex assembly (ortholog); regulation of apoptotic process (ortholog); regulation of mitotic cell cycle spindle assembly checkpoint (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Embryo Loss (ortholog); esophageal cancer (ortholog) NW_004955493 3440832 3499658 + 102030433 AGCD01060997;AGCD01060998;AGCD01060999;GBDF01082047;XM_005405126;XM_005405127;XM_013504899 XP_005405183;XP_005405184;XP_013360353 MODEL 8701226 protein-coding LOC102014248 olfactory receptor 6F1-like NW_004955418 30394643 30395602 + 102014248 AGCD01019515;XM_005382375 XP_005382432 MODEL 8773330 protein-coding Scube2 signal peptide, CUB domain and EGF like domain containing 2 ENCODES a protein that exhibits hedgehog family protein binding (ortholog); protein carrier activity (ortholog); INVOLVED IN chondrocyte differentiation involved in endochondral bone morphogenesis (ortholog); positive regulation of chondrocyte proliferation (ortholog); positive regulation of ossification (ortholog); ASSOCIATED WITH stomach cancer (ortholog); FOUND IN extracellular region (ortholog) NW_004955414 24751134 24818338 - 102025996 AGCD01015553;AGCD01015554;AGCD01015555;AGCD01015556;GBBH01011763;GBDK01358943;XM_013511992 XP_013367446 MODEL 8762173 protein-coding Fli1 Fli-1 proto-oncogene, ETS transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); blood circulation (ortholog); megakaryocyte development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Epistaxis (ortholog); esophageal cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955412 29653621 29773412 + 102012178 AGCD01013284;AGCD01013285;AGCD01013286;GBDK01013563;XM_005378532;XM_013511152;XM_013511153 XP_005378589;XP_013366606;XP_013366607 MODEL 8760915 protein-coding F8 coagulation factor VIII INVOLVED IN blood coagulation, intrinsic pathway (ortholog); proteolysis (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH Adrenal Insufficiency (ortholog); aortic disease (ortholog); autoimmune disease (ortholog); FOUND IN extracellular region (ortholog); protein-containing complex (ortholog) NW_004955594 658686 800101 + 102027251 AGCD01076437;AGCD01076438;AGCD01076439;AGCD01076440;AGCD01076441;AGCD01076442;GBDK01080123;XM_005414663;XM_013509994;XM_013509995;XM_013509996;XM_013509997;XM_013509998;XM_013509999;XM_013510000;XM_013510001;XR_001232543 XP_005414720;XP_013365448;XP_013365449;XP_013365450;XP_013365451;XP_013365452;XP_013365453;XP_013365454;XP_013365455 MODEL 8841646 protein-coding Rab5if RAB5 interacting factor INVOLVED IN mitochondrial respirasome assembly (ortholog); multi-pass transmembrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH craniofacial dysmorphism, skeletal anomalies, and impaired intellectual development syndrome 2 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955422 25003195 25017380 - 102022094 AGCD01023239;AGCD01023240;GBDK01078344;XM_005384737 XP_005384794 MODEL 8791802 ncrna LOC102009902 uncharacterized LOC102009902 NW_004956152 10489 11424 - 102009902 AGCD01079147;GBBH01228485;XR_265206 MODEL 8993717 protein-coding LOC102023243 serpin B9-like NW_004955465 10475882 10506105 + 102023243 AGCD01050510;GBDJ01011024;XM_005398919;XM_005398922;XM_005398923;XM_005398925;XM_005398926;XM_005398927;XM_013521820;XM_013521821;XM_013521822;XM_013521823 XP_005398976;XP_005398979;XP_005398980;XP_005398982;XP_005398983;XP_005398984;XP_013377274;XP_013377275;XP_013377276;XP_013377277 MODEL 39132830 snrna U6 U6 spliceosomal RNA 8849623 protein-coding Tasp1 taspase 1 ENCODES a protein that exhibits identical protein binding (ortholog); threonine-type endopeptidase activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955415 22856382 23091732 - 102030625 AGCD01016545;AGCD01016546;AGCD01016547;AGCD01016548;AGCD01016549;AGCD01016550;GBDF01223881;XM_005380885;XR_001233252 XP_005380942 MODEL 39133062 snrna U6 U6 spliceosomal RNA 8973043 protein-coding Topaz1 testis and ovary specific TOPAZ 1 INVOLVED IN apoptotic process (ortholog); lncRNA transcription (ortholog); spermatocyte division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog) NW_004955420 27048650 27106983 - 102011775 AGCD01021449;GBDF01250001;XM_013513516;XM_013513517;XM_013513518 XP_013368970;XP_013368971;XP_013368972 MODEL 39131944 snrna U1 U1 spliceosomal RNA 8837252 protein-coding Dnai7 dynein axonemal intermediate chain 7 ENCODES a protein that exhibits beta-tubulin binding (ortholog); microtubule binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN axonemal dynein complex (ortholog); cilium (ortholog); cytoplasm (ortholog) NW_004955413 20227807 20287211 - 102028947 AGCD01014212;GBDI01218967;XM_005379097;XM_013511446;XM_013511447;XM_013511448 XP_005379154;XP_013366900;XP_013366901;XP_013366902 MODEL 8951786 protein-coding Dzip1 DAZ interacting zinc finger protein 1 ENCODES a protein that exhibits BBSome binding (ortholog); molecular adaptor activity (ortholog); protein sequestering activity (ortholog); INVOLVED IN ciliary basal body organization (ortholog); cilium assembly (ortholog); cilium organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant intellectual developmental disorder 61 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) NW_004955404 14428026 14481106 + 102023426 AGCD01003509;GBCE01127362;XM_005374099 XP_005374156 MODEL 8762369 ncrna LOC102021474 uncharacterized LOC102021474 NW_004955433 10006841 10023375 + 102021474 AGCD01031621;GBDF01126170;XR_001234700;XR_261577;XR_261578 MODEL 8996682 protein-coding Kif2b kinesin family member 2B INVOLVED IN metaphase chromosome alignment (ortholog); microtubule depolymerization (ortholog); regulation of chromosome segregation (ortholog) NW_004955451 8528405 8530661 - 102020514 AGCD01043272;GBDF01007804;XM_005394091 XP_005394148 MODEL 8826072 protein-coding Ilf2 interleukin enhancer binding factor 2 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955545 308560 316053 - 102018983 AGCD01071783;AGCD01071784;GBDK01416208;XM_005411437;XM_005411438 XP_005411494;XP_005411495 MODEL 9011989 protein-coding Cysltr2 cysteinyl leukotriene receptor 2 ENCODES a protein that exhibits cysteinyl leukotriene receptor activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); negative regulation of glial cell proliferation (ortholog); positive regulation of angiogenesis (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH otitis media; aspirin-induced respiratory disease (ortholog); asthma (ortholog); FOUND IN membrane (ortholog) NW_004955431 2203342 2282635 + 102018629 AGCD01029924;AGCD01029925;AGCD01029926;GBDI01106238;XM_005387568;XM_005387569;XM_013515743 XP_005387625;XP_005387626;XP_013371197 MODEL 8975253 protein-coding LOC102004655 zinc finger protein 709-like NW_004955569 1219307 1247738 - 102004655 AGCD01074645;GBDI01176345;XM_005413497 XP_005413554 MODEL 8707162 protein-coding Thap4 THAP domain containing 4 ENCODES a protein that exhibits heme binding (ortholog); identical protein binding (ortholog); nitric oxide binding (ortholog); INVOLVED IN cellular response to reactive nitrogen species (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955542 192888 217985 + 102006957 AGCD01071461;AGCD01071462;AGCD01071463;AGCD01071464;GBBH01061509;GBDF01047758;XM_013508087 XP_013363541 MODEL 8806136 protein-coding Snd1 staphylococcal nuclease and tudor domain containing 1 ENCODES a protein that exhibits 3' overhang single-stranded DNA endonuclease activity (ortholog); endonuclease activity (ortholog); RISC complex binding (ortholog); INVOLVED IN miRNA catabolic process (ortholog); mRNA catabolic process (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dense body (ortholog) NW_004955479 8692674 9124504 + 102024672 AGCD01056451;AGCD01056452;AGCD01056453;AGCD01056454;AGCD01056455;AGCD01056456;AGCD01056457;GBDI01008676;XM_005402366 XP_005402423 MODEL 8939379 protein-coding H1-5 H1.5 linker histone, cluster member ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN chromatin organization (ortholog); establishment of protein localization to chromatin (ortholog); muscle organ development (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); heterochromatin (ortholog) NW_004955465 13390856 13391994 + 102006886 AGCD01050607;GBDJ01408770;XM_005398950 XP_005399007 MODEL 8808908 ncrna LOC102005351 uncharacterized LOC102005351 NW_004955466 1620912 1640471 + 102005351 AGCD01050714;GBDI01342166;XR_001236819;XR_001236820;XR_263277 MODEL 39132676 snrna U6 U6 spliceosomal RNA 8867999 pseudo LOC102013061 cysteine-rich with EGF-like domain protein 2 pseudogene NW_004955409 26647055 26648471 + 102013061 AGCD01010196 MODEL 8894736 protein-coding LOC102014254 uncharacterized LOC102014254 NW_004955420 29515927 29530159 + 102014254 AGCD01021509;GBDJ01291266;XM_013513574;XR_001233782;XR_001233783;XR_001233784;XR_001233785;XR_001233786;XR_001233787 XP_013369028 MODEL 8845435 protein-coding Gmds GDP-mannose 4,6-dehydratase ENCODES a protein that exhibits GDP-mannose 4,6-dehydratase activity (ortholog); identical protein binding (ortholog); NADP+ binding (ortholog); INVOLVED IN 'de novo' GDP-L-fucose biosynthetic process (ortholog); GDP-mannose metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) NW_004955465 11133513 11562562 + 102028514 AGCD01050521;AGCD01050522;AGCD01050523;AGCD01050524;AGCD01050525;AGCD01050526;GBBH01033606;XM_013521779 XP_013377233 MODEL 9029394 protein-coding F9 coagulation factor IX ENCODES a protein that exhibits calcium ion binding (ortholog); endopeptidase activity (ortholog); metal ion binding (ortholog); INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); proteolysis (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH autosomal hemophilia A (ortholog); blood coagulation disease (ortholog); Developmental Disabilities (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog); protein-containing complex (ortholog) NW_004955489 5747718 5780899 - 102007779 AGCD01059946;XM_005404570 XP_005404627 MODEL 10278425 protein-coding Ltbp2 latent transforming growth factor beta binding protein 2 INVOLVED IN response to alkaloid (ortholog); supramolecular fiber organization (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); brachydactyly (ortholog); Breast Cancer, Familial (ortholog) NW_004955523 919220 1005747 + 106147157 AGCD01068486;AGCD01068487;GBCE01000154;GBDJ01375566;XM_013507149 XP_013362603 MODEL 9048928 ncrna LOC102025394 uncharacterized LOC102025394 NW_004955533 2066486 2072522 + 102025394 AGCD01070384;XR_264746 MODEL 8723911 protein-coding Ttc34 tetratricopeptide repeat domain 34 ASSOCIATED WITH Breast Cancer, Familial (ortholog); Familial Pancreatic Carcinoma (ortholog); uterine carcinosarcoma (ortholog) NW_004955486 8620609 8633069 + 102003451 AGCD01059152;AGCD01059153;GBDJ01134032;XM_005404156 XP_005404213 MODEL 39131479 protein-coding LCMT2 leucine carboxyl methyltransferase 2 8726297 protein-coding Nsun4 NOP2/Sun RNA methyltransferase 4 ENCODES a protein that exhibits mitochondrial large ribosomal subunit binding (ortholog); mitochondrial ribosomal large subunit rRNA binding (ortholog); mRNA (cytidine-5-)-methyltransferase activity (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); mitochondrial RNA catabolic process (ortholog); mitochondrial RNA modification (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955464 11934146 11962513 - 102019989 AGCD01050168;AGCD01050169;GBCE01032888;XM_005398675;XM_005398676;XM_013521590;XM_013521591 XP_005398732;XP_005398733;XP_013377044;XP_013377045 MODEL 8945170 protein-coding Synj2 synaptojanin 2 ENCODES a protein that exhibits inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity (ortholog); inositol-1,4,5-trisphosphate 5-phosphatase activity (ortholog); phosphatidylinositol monophosphate phosphatase activity (ortholog); INVOLVED IN clathrin coat assembly (ortholog); inositol phosphate catabolic process (ortholog); phosphatidylinositol dephosphorylation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytoplasmic microtubule (ortholog) NW_004955439 4305630 4400775 - 102015243 AGCD01035708;GBCE01021710;GBCQ01037324;XM_005390531;XM_005390532;XM_013517389;XM_013517390;XM_013517391;XM_013517392;XM_013517393 XP_005390588;XP_005390589;XP_013372843;XP_013372844;XP_013372845;XP_013372846;XP_013372847 MODEL 39132102 snrna U6 U6 spliceosomal RNA 8977005 protein-coding Slc25a41 solute carrier family 25 member 41 ENCODES a protein that exhibits ADP transmembrane transporter activity (ortholog); ADP:phosphate antiporter activity (ortholog); ATP transmembrane transporter activity (ortholog); INVOLVED IN ADP transport (ortholog); ATP transport (ortholog); mitochondrial ADP transmembrane transport (ortholog); ASSOCIATED WITH sarcoma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955495 3175892 3182637 + 102013733 AGCD01061833;GBDF01010067;XM_005405722 XP_005405779 MODEL 8912913 ncrna LOC102018892 uncharacterized LOC102018892 NW_004955455 1322663 1342562 + 102018892 AGCD01045573;AGCD01045574;GBDF01128397;XR_001236278;XR_001236279;XR_001236280;XR_001236281;XR_262813 MODEL 8887112 protein-coding Saxo4 stabilizer of axonemal microtubules 4 ENCODES a protein that exhibits phosphatase binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); ciliary basal body (ortholog); cilium (ortholog) NW_004955511 6105063 6116809 - 102012460 AGCD01066597;GBDK01219508;XM_005408146;XM_013506470 XP_005408203;XP_013361924 MODEL 8907540 protein-coding LOC102004656 UDP-glucuronosyltransferase 2B14-like NW_004955447 4066107 4075826 + 102004656 AGCD01040701;AGCD01040702;GBDJ01380770;XM_005392809;XM_013518529 XP_005392866;XP_013373983 MODEL 8783935 ncrna LOC102023244 uncharacterized LOC102023244 NW_004955466 4629522 4635286 - 102023244 AGCD01050834;GBDI01209682;XR_263289 MODEL 8940499 protein-coding Scube3 signal peptide, CUB domain and EGF like domain containing 3 ENCODES a protein that exhibits BMP binding (ortholog); BMP receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of BMP signaling pathway (ortholog); positive regulation of osteoblast differentiation (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Dwarfism (ortholog); esophageal cancer (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955437 3178985 3213772 + 102022425 AGCD01034300;GBDI01201758;GBDJ01353348;XM_005389543;XM_005389544;XM_005389545 XP_005389600;XP_005389601;XP_005389602 MODEL 39132832 snrna U6 U6 spliceosomal RNA 8934545 pseudo LOC102003922 tubulin polyglutamylase TTLL4 pseudogene NW_004955585 115408 119336 - 102003922 AGCD01075993 MODEL 8788996 protein-coding Sln sarcolipin INVOLVED IN positive regulation of cold-induced thermogenesis (ortholog); regulation of relaxation of muscle (ortholog); sarcoplasmic reticulum calcium ion transport (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); sarcoplasmic reticulum (ortholog); sarcoplasmic reticulum membrane (ortholog) NW_004955412 10057481 10062178 - 102003220 AGCD01012756;GBDK01231463;XM_005378031;XM_005378032 XP_005378088;XP_005378089 MODEL 8791901 ncrna LOC102013066 uncharacterized LOC102013066 NW_004955411 33836261 33840026 + 102013066 AGCD01012375;GBDF01143020;XR_259952 MODEL 8827241 protein-coding Rab6a RAB6A, member RAS oncogene family ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); G protein activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); early endosome to Golgi transport (ortholog); protein localization to Golgi apparatus (ortholog); ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN acrosomal membrane (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955414 17758071 17806727 + 102013278 AGCD01015251;AGCD01015252;AGCD01015253;AGCD01015254;AGCD01015255;GBDJ01023296;XM_005379939;XM_005379940 XP_005379996;XP_005379997 MODEL 8924222 protein-coding Tdrd7 tudor domain containing 7 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN germ cell development (ortholog); lens fiber cell differentiation (ortholog); lens morphogenesis in camera-type eye (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cataract (ortholog); cataract 36 (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) NW_004955419 27919664 27983426 - 102025799 AGCD01020450;AGCD01020451;AGCD01020452;GBBH01063289;XM_005382851;XM_013513266;XM_013513267 XP_005382908;XP_013368720;XP_013368721 MODEL 8877151 protein-coding Tat tyrosine aminotransferase ENCODES a protein that exhibits amino acid binding (ortholog); identical protein binding (ortholog); L-tyrosine:2-oxoglutarate transaminase activity (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); amino acid metabolic process (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH alcohol withdrawal syndrome (ortholog); genetic disease (ortholog); tyrosinemia (ortholog); FOUND IN cytosol (ortholog) NW_004955484 4278083 4287535 - 102011994 AGCD01058206;GBDF01020940;XM_005403508;XM_005403509 XP_005403565;XP_005403566 MODEL 8916007 ncrna LOC102009480 uncharacterized LOC102009480 NW_004955412 20745073 20752832 + 102009480 AGCD01013012;AGCD01013013;GBDF01262373;XR_001232926;XR_260006 MODEL 9037741 protein-coding Ydjc YdjC chitooligosaccharide deacetylase homolog ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955442 17481581 17483858 + 102015669 AGCD01037955;GBDF01253063;XM_005391703 XP_005391760 MODEL 8901470 protein-coding LOC102012708 uncharacterized LOC102012708 NW_004955449 15463379 15557849 - 102012708 AGCD01042194;AGCD01042195;AGCD01042196;AGCD01042197;GBDK01148150;XM_005393396;XM_005393397;XR_001235813;XR_001235814;XR_262508;XR_262509 XP_005393453;XP_005393454 MODEL 8765177 pseudo LOC102019317 ubiquitin-like domain-containing CTD phosphatase 1 pseudogene NW_004955435 16026713 16028322 + 102019317 AGCD01033293 MODEL 9036435 protein-coding Topbp1 DNA topoisomerase II binding protein 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); identical protein binding (ortholog); phosphorylation-dependent protein binding (ortholog); INVOLVED IN broken chromosome clustering (ortholog); chromosome organization (ortholog); DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN BRCA1-B complex (ortholog); chromosome (ortholog); condensed nuclear chromosome (ortholog) NW_004955501 4907687 4974995 + 102028214 AGCD01064148;GBDF01083772;XM_005406814;XM_005406815;XM_013505749;XM_013505750;XM_013505751;XM_013505753;XR_264253 XP_005406871;XP_005406872;XP_013361203;XP_013361204;XP_013361205;XP_013361207 MODEL 8940666 pseudo LOC102003598 SRSF protein kinase 1 pseudogene NW_004955447 5510865 5512873 + 102003598 AGCD01040759 MODEL 9043342 pseudo LOC102020355 prefoldin subunit 4 pseudogene NW_004955500 8267493 8270378 - 102020355 AGCD01063985;AGCD01063986 MODEL 9064995 protein-coding Lmf2 lipase maturation factor 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955413 33487970 33492033 - 102003532 AGCD01014672;GBDK01128390;XM_005379576 XP_005379633 MODEL 8947233 protein-coding Flii FLII actin remodeling protein ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN sarcomere organization (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN brush border (ortholog); podosome (ortholog) NW_004955478 11061728 11075370 + 102021340 AGCD01056157;AGCD01056158;GBBH01061469;GBDI01005007;XM_013503179 XP_013358633 MODEL 9000861 pseudo LOC102010721 TRMT1-like protein pseudogene NW_004955431 1011390 1013166 - 102010721 AGCD01029888 MODEL 8774510 pseudo LOC102009903 probable U3 small nucleolar RNA-associated protein 11 pseudogene NW_004957626 626 1246 + 102009903 AGCD01081022 MODEL 8855798 protein-coding Slc10a2 solute carrier family 10 member 2 ENCODES a protein that exhibits bile acid:sodium symporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); response to bacterium (ortholog); ASSOCIATED WITH cognitive disorder (ortholog); Diabetes Complications (ortholog); intestinal disease (ortholog); FOUND IN apical plasma membrane (ortholog); microvillus (ortholog); proteasome complex (ortholog) NW_004955404 8122119 8137236 + 102027934 AGCD01003348;XM_005374019 XP_005374076 MODEL 8784056 protein-coding Brd9 bromodomain containing 9 ENCODES a protein that exhibits histone reader activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); site of double-strand break (ortholog) NW_004955504 416145 434132 - 102028991 AGCD01064819;GBCE01000275;XM_005407029;XM_005407030;XM_013505887;XM_013505888;XM_013505889 XP_005407086;XP_005407087;XP_013361341;XP_013361342;XP_013361343 MODEL 39133063 snrna U6 U6 spliceosomal RNA 39131945 snrna U1 U1 spliceosomal RNA 39132885 snrna U5 U5 spliceosomal RNA 8779222 protein-coding LOC102014255 3-ketoacyl-CoA thiolase B, peroxisomal-like NW_004955421 4985856 4998119 - 102014255 AGCD01021709;AGCD01021710;GBCQ01008989;XM_005383729 XP_005383786 MODEL 8872856 protein-coding Dnaja1 DnaJ heat shock protein family (Hsp40) member A1 ENCODES a protein that exhibits ATPase activator activity (ortholog); C3HC4-type RING finger domain binding (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); flagellated sperm motility (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH galactosemia (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); microtubule cytoskeleton (ortholog) NW_004955472 2604002 2618033 - 102011980 AGCD01053478;AGCD01053479;AGCD01053480;GBDK01003789;XM_005401111 XP_005401168 MODEL 8940333 protein-coding LOC102016169 tumor necrosis factor receptor superfamily member 23-like NW_004955422 14853579 14865230 - 102016169 AGCD01022871;AGCD01022872;GBDF01266354;XM_013513880 XP_013369334 MODEL 8765696 pseudo LOC102009912 KATNB1-like protein 1 pseudogene NW_004955406 13799840 13800569 + 102009912 AGCD01005954 MODEL 8920298 ncrna LOC102008005 uncharacterized LOC102008005 NW_004955494 6144787 6169872 + 102008005 AGCD01061530;GBDF01223353;XR_001231296;XR_264116 MODEL 8803754 protein-coding LOC102021482 sperm acrosome membrane-associated protein 4-like NW_004955437 249864 253964 - 102021482 AGCD01034115;GBCE01030987;XM_013516852;XM_013516853;XR_001235059;XR_001235060 XP_013372306;XP_013372307 MODEL 8838154 protein-coding Dzip1l DAZ interacting zinc finger protein 1 like INVOLVED IN ciliary transition zone assembly (ortholog); cilium assembly (ortholog); floor plate development (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); ciliary basal body (ortholog) NW_004955501 895245 965626 + 102011681 AGCD01064043;GBDI01220148;XM_005406770;XM_005406772;XM_013505765;XM_013505766;XM_013505767;XM_013505768;XM_013505769;XM_013505770;XM_013505771;XM_013505772;XM_013505773;XM_013505774;XM_013505775;XM_013505776;XM_013505777;XM_013505778;XM_013505779;XM_013505780 XP_005406827;XP_005406829;XP_013361219;XP_013361220;XP_013361221;XP_013361222;XP_013361223;XP_013361224;XP_013361225;XP_013361226;XP_013361227;XP_013361228;XP_013361229;XP_013361230;XP_013361231;XP_013361232;XP_013361233;XP_013361234 MODEL 8737534 pseudo LOC102009482 growth hormone-inducible transmembrane protein pseudogene NW_004955466 13355054 13356148 - 102009482 AGCD01051156 MODEL 9045940 protein-coding Ilf3 interleukin enhancer binding factor 3 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of translation (ortholog); negative regulation of viral genome replication (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleolus (ortholog) NW_004955495 1814012 1844605 + 102010277 AGCD01061733;AGCD01061734;AGCD01061735;GBDF01047065;XM_005405615;XM_005405616;XM_005405618;XM_005405619;XM_005405621;XM_005405622;XM_005405623;XM_013505145;XM_013505146 XP_005405672;XP_005405673;XP_005405675;XP_005405676;XP_005405678;XP_005405679;XP_005405680;XP_013360599;XP_013360600 MODEL 8705810 protein-coding Cysrt1 cysteine rich tail 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN biological process involved in interaction with symbiont (ortholog); establishment of skin barrier (ortholog); FOUND IN cornified envelope (ortholog) NW_004955513 5223124 5224650 + 102010396 AGCD01066963;GBDI01327324;XM_005408604 XP_005408661 MODEL 8991575 protein-coding Thap5 THAP domain containing 5 ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN negative regulation of cell cycle (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955410 12808700 12814915 - 102012838 AGCD01010872;GBDF01221249;XM_005377310 XP_005377367 MODEL 8808849 protein-coding Lcmt2 leucine carboxyl methyltransferase 2 NW_004955416 9890208 9892326 - 102004810 AGCD01017099;GBDJ01334253;XM_005381378 XP_005381435 MODEL 9059166 protein-coding LOC102005354 T-cell surface glycoprotein YE1/48-like NW_004955413 7520787 7531148 + 102005354 AGCD01013822;GBDK01356301;XM_005378928 XP_005378985 MODEL 39132677 snrna U6 U6 spliceosomal RNA 10312308 ncrna LOC106147370 uncharacterized LOC106147370 NW_004955547 2459406 2470898 + 106147370 AGCD01072281;AGCD01072282;GBCB01056621;XR_001232228 MODEL 8864890 protein-coding Sned1 sushi, nidogen and EGF like domains 1 INVOLVED IN cell adhesion mediated by integrin (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955542 587159 628159 - 102012475 AGCD01071474;GBCE01117402;XM_005411144;XM_013508057;XM_013508058;XM_013508059 XP_005411201;XP_013363511;XP_013363512;XP_013363513 MODEL 8908482 pseudo LOC102018893 putative dimethylaniline monooxygenase [N-oxide-forming] 6 NW_004955406 11808291 11826736 + 102018893 AGCD01005896;XM_005375459 MODEL 8881530 protein-coding LOC102022194 olfactory receptor 1J2-like NW_004955419 5338113 5339093 + 102022194 AGCD01019802;XM_005382920 XP_005382977 MODEL 9029559 protein-coding Gmeb1 glucocorticoid modulatory element binding protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); Hsp27 protein binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955452 7732095 7766810 + 102019235 AGCD01044191;AGCD01044192;AGCD01044193;AGCD01044194;GBDF01112717;XM_005394966;XM_005394967;XM_013519493;XM_013519494;XM_013519495 XP_005395023;XP_005395024;XP_013374947;XP_013374948;XP_013374949 MODEL 8823546 pseudo LOC102023245 non-histone chromosomal protein HMG-14-like NW_004955412 26679167 26679592 - 102023245 AGCD01013208 MODEL 8863415 protein-coding LOC102018085 protein FAM205A-like NW_004955472 1304677 1310702 + 102018085 AGCD01053385;GBDF01086556;XM_005401038;XM_005401039;XM_005401040 XP_005401095;XP_005401096;XP_005401097 MODEL 8816373 protein-coding LOC102003924 uncharacterized LOC102003924 NW_004955402 38979252 38993934 + 102003924 AGCD01000974;GBDF01101946;NM_001371756;XM_005373171;XM_013522414 NP_001358685;XP_005373228;XP_013377868 VALIDATED 8714119 pseudo LOC102012709 40S ribosomal protein S29 pseudogene NW_004955587 108587 108779 - 102012709 AGCD01076058 MODEL 9049636 protein-coding Kif2c kinesin family member 2C ENCODES a protein that exhibits microtubule plus-end binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment or maintenance of microtubule cytoskeleton polarity (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromosome, centromeric region (ortholog); glutamatergic synapse (ortholog); kinetochore (ortholog) NW_004955464 13453637 13475447 - 102011966 AGCD01050281;AGCD01050282;AGCD01050283;GBDF01008525;XM_005398743;XM_005398744;XM_005398746;XM_013521631;XM_013521632 XP_005398800;XP_005398801;XP_005398803;XP_013377085;XP_013377086 MODEL 9020402 protein-coding LOC102025397 SLAM family member 9-like NW_004955545 3193069 3198260 - 102025397 AGCD01071934;GBDF01111729;XM_013508200 XP_013363654 MODEL 8856161 ncrna LOC102014256 uncharacterized LOC102014256 NW_004955421 27341522 27382472 - 102014256 AGCD01022282;GBDJ01081484;XR_001233846;XR_001233847;XR_001233848 MODEL 730469497 misc_rna H19_1 H19 conserved region 1 8904057 protein-coding Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase ENCODES a protein that exhibits antigen binding (ortholog); DNA binding (ortholog); DNA topoisomerase binding (ortholog); INVOLVED IN DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); ASSOCIATED WITH asthma (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); gamma-tubulin complex (ortholog) NW_004955472 3073090 3076607 + 102015004 AGCD01053501;GBBH01173020;GBDF01118627;XM_013522944 XP_013378398 MODEL 39132103 snrna U6 U6 spliceosomal RNA 8978832 protein-coding Synj2bp synaptojanin 2 binding protein ENCODES a protein that exhibits type II activin receptor binding (ortholog); INVOLVED IN intracellular distribution of mitochondria (ortholog); negative regulation of activin receptor signaling pathway (ortholog); negative regulation of angiogenesis (ortholog); FOUND IN cell surface (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955466 80766 127383 + 102022798 AGCD01050649;AGCD01050650;GBDF01187942;XM_005399019 XP_005399076 MODEL 8952635 protein-coding Gen1 GEN1 structure-specific endonuclease ENCODES a protein that exhibits 5'-flap endonuclease activity (ortholog); crossover junction DNA endonuclease activity (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); positive regulation of mitotic cell cycle spindle assembly checkpoint (ortholog); regulation of centrosome duplication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cervical cancer (ortholog); FOUND IN centrosome (ortholog) NW_004955469 552850 590792 + 102007001 AGCD01052227;AGCD01052228;AGCD01052229;GBDJ01319147;XM_005400326;XM_005400328 XP_005400383;XP_005400385 MODEL 8870257 protein-coding Slc25a42 solute carrier family 25 member 42 ENCODES a protein that exhibits ADP phosphatase activity (ortholog); ADP transmembrane transporter activity (ortholog); AMP transmembrane transporter activity (ortholog); INVOLVED IN ADP transport (ortholog); AMP transport (ortholog); ATP transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cardiomyopathy (ortholog); colorectal cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955524 2674508 2683304 - 102007050 AGCD01068828;GBCB01022455;XM_005409612;XM_005409613;XM_013507218;XM_013507219 XP_005409669;XP_005409670;XP_013362672;XP_013362673 MODEL 8949886 pseudo LOC102004657 UBX domain-containing protein 2B pseudogene NW_004955402 184252 185227 + 102004657 AGCD01000011 MODEL 39133064 snrna U6 U6 spliceosomal RNA 39132833 snrna U6 U6 spliceosomal RNA 8746048 protein-coding Slc10a3 solute carrier family 10 member 3 INVOLVED IN response to retinoic acid (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); lung cancer (ortholog) NW_004955580 1002029 1005673 - 102005197 AGCD01075638;GBCE01024045;XM_005414206 XP_005414263 MODEL 39132891 snrna U5 U5 spliceosomal RNA 8727424 protein-coding Tatdn1 TatD DNase domain containing 1 ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); DNA endonuclease activity (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) NW_004955540 3154273 3198140 - 102008147 AGCD01071335;AGCD01071336;GBBH01177239;XM_013507914;XM_013507915;XM_013507917;XR_001232123;XR_001232124;XR_001232125;XR_001232126 XP_013363368;XP_013363369;XP_013363371 MODEL 8742682 protein-coding Yeats2 YEATS domain containing 2 ENCODES a protein that exhibits histone binding (ortholog); histone reader activity (ortholog); modification-dependent protein binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle (ortholog); regulation of cell division (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN ATAC complex (ortholog); mitotic spindle (ortholog); nucleus (ortholog) NW_004955420 23590636 23666689 - 102029974 AGCD01021249;AGCD01021250;AGCD01021251;GBDJ01062988;XM_005383359;XM_005383360;XM_005383361 XP_005383416;XP_005383417;XP_005383418 MODEL 9012187 protein-coding Rab6b RAB6B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); myosin V binding (ortholog); INVOLVED IN Golgi organization (ortholog); protein localization to Golgi membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) NW_004955501 4751647 4781094 + 102026339 AGCD01064144;GBBH01065558;GBCQ01069711;XM_013505801 XP_013361255 MODEL 8928631 protein-coding LOC102009913 keratin-associated protein 20-2-like NW_004955407 30225299 30225502 + 102009913 AGCD01007628;XM_005375649 XP_005375706 MODEL 8983212 protein-coding LOC102019320 mamu class II histocompatibility antigen, DR alpha chain ENCODES a protein that exhibits peptide antigen binding (ortholog); polysaccharide binding (ortholog); T cell receptor binding (ortholog); INVOLVED IN antigen processing and presentation of endogenous peptide antigen via MHC class II (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); antigen processing and presentation of peptide or polysaccharide antigen via MHC class II (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); Asthma and Nasal Polyps (ortholog); FOUND IN autolysosome membrane (ortholog); cell surface (ortholog); early endosome membrane (ortholog) NW_004955437 1109735 1114742 + 102019320 AGCD01034190;GBBH01030587;XM_005389449 XP_005389506 MODEL 8892747 protein-coding Nsun5 NOP2/Sun RNA methyltransferase 5 ENCODES a protein that exhibits rRNA (cytosine-C5-)-methyltransferase activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); cognition (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) NW_004955456 14331890 14336650 + 102030276 AGCD01046639;GBDK01231053;XM_005396790 XP_005396847 MODEL 9001856 pseudo LOC102020359 40S ribosomal protein S2 pseudogene NW_004955428 23371700 23372590 - 102020359 AGCD01028222 MODEL 8861275 pseudo LOC102003599 ubiquitin-like protein ATG12 pseudogene NW_004955448 10940263 10942006 + 102003599 AGCD01041506 MODEL 8858584 protein-coding Cystm1 cysteine rich transmembrane module containing 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); stomach cancer (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955418 415703 475796 - 102010694 AGCD01018675;AGCD01018676;GBDI01021426;XM_005382046 XP_005382103 MODEL 8775106 ncrna LOC102010723 uncharacterized LOC102010723 NW_004955518 2285051 2292236 + 102010723 AGCD01067775;GBBH01218705;XR_264568 MODEL 9064101 protein-coding Lmln leishmanolysin like peptidase ASSOCIATED WITH acute myeloid leukemia (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) NW_004955420 11867034 11953303 - 102026643 AGCD01020841;AGCD01020842;AGCD01020843;AGCD01020844;AGCD01020845;AGCD01020846;AGCD01020847;AGCD01020848;GBCE01119901;GBCQ01076834;XM_013513591 XP_013369045 MODEL 8938024 protein-coding Lcn10 lipocalin 10 INVOLVED IN heart development (ortholog); inflammatory response (ortholog); macrophage activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog) NW_004955513 4063245 4066160 + 102030556 AGCD01066914;XM_005408481 XP_005408538 MODEL 8933771 protein-coding Flna filamin A ENCODES a protein that exhibits actin filament binding (ortholog); DNA-binding transcription factor binding (ortholog); Fc-gamma receptor I complex binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin cytoskeleton organization (ortholog); adenylate cyclase-inhibiting dopamine receptor signaling pathway (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; integrin mediated signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); actin filament bundle (ortholog) NW_004955580 874233 895172 + 102028037 AGCD01075628;GBDI01017513;GBDJ01003927;XM_013509692 XP_013365146 MODEL 10139305 ncrna LOC106147371 uncharacterized LOC106147371 NW_004955547 416785 419469 + 106147371 AGCD01072154;GBDI01090934;XR_001232229 MODEL 8750663 protein-coding Scx scleraxis bHLH transcription factor ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell differentiation (ortholog); cellular response to BMP stimulus (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) NW_004955454 2886981 2888829 + 102018058 AGCD01045039;GBCB01079555;GBCQ01092845;XM_013520103 XP_013375557 MODEL 8730210 protein-coding Sltm SAFB like transcription modulator ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) NW_004955450 15691472 15748123 + 102013894 AGCD01042809;AGCD01042810;AGCD01042811;AGCD01042812;AGCD01042813;GBCB01022390;GBCE01053462;XM_013518874 XP_013374328 MODEL 8838666 protein-coding Fa2h fatty acid 2-hydroxylase ENCODES a protein that exhibits 4-hydroxysphinganine ceramide fatty acyl 2-hydroxylase activity (ortholog); fatty acid 2-hydroxylase activity (ortholog); free fatty acid 2-hydroxylase activity (ortholog); INVOLVED IN central nervous system myelin maintenance (ortholog); ceramide biosynthetic process (ortholog); establishment of skin barrier (ortholog); ASSOCIATED WITH Ataxia (ortholog); Breast Cancer, Familial (ortholog); Developmental Disabilities (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) NW_004955484 2726496 2775763 + 102024680 AGCD01058129;AGCD01058130;AGCD01058131;GBDF01006028;XM_005403456 XP_005403513 MODEL 39131946 snrna U1 U1 spliceosomal RNA 8970257 protein-coding LOC102013070 endothelial cell-selective adhesion molecule NW_004955412 25824222 25832315 - 102013070 AGCD01013174;GBBH01227824;XM_005378437 XP_005378494 MODEL 8797074 protein-coding Tdrd9 tudor domain containing 9 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN fertilization (ortholog); male meiosis I (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); azoospermia (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); piP-body (ortholog) NW_004955538 2667219 2749805 + 102020712 AGCD01071136;AGCD01071137;AGCD01071138;GBDF01090041;XM_005410819;XM_005410820;XM_005410821;XM_013507899 XP_005410876;XP_005410877;XP_005410878;XP_013363353 MODEL 8898016 protein-coding Ltbp3 latent transforming growth factor beta binding protein 3 ENCODES a protein that exhibits transforming growth factor beta binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); bone remodeling (ortholog); lung saccule development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amelogenesis imperfecta (ortholog); anodontia (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) NW_004955422 19714161 19730344 + 102008953 AGCD01023029;AGCD01023030;GBBH01064004;GBCE01000619;XM_005384491 XP_005384548 MODEL 39131527 protein-coding TTC36 tetratricopeptide repeat domain 36 8724820 protein-coding Saxo5 stabilizer of axonemal microtubules 5 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog) NW_004955563 1723768 1729831 - 102016531 AGCD01074159;AGCD01074160;GBDF01087755;GBDF01087757;XM_013509149 XP_013364603 MODEL 9036357 protein-coding LOC102023246 histone H4 NW_004955413 899257 901762 - 102023246 AGCD01013494;XM_005378712 XP_005378769 MODEL 9032619 protein-coding LOC102021483 HLA class II histocompatibility antigen, DQ beta 1 chain-like NW_004955437 1393285 1399648 - 102021483 AGCD01034205;GBBH01003753;XM_005389455 XP_005389512 MODEL 8986391 protein-coding Dzip3 DAZ interacting zinc finger protein 3 ENCODES a protein that exhibits phosphatase binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); RNA binding (ortholog); INVOLVED IN protein polyubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955427 9481196 9571483 + 102017260 AGCD01027101;AGCD01027102;GBCQ01179483;XM_005386361;XM_013515123;XM_013515124;XM_013515125;XM_013515126;XM_013515127;XR_001234381 XP_005386418;XP_013370577;XP_013370578;XP_013370579;XP_013370580;XP_013370581 MODEL 39132678 snrna U6 U6 spliceosomal RNA 8731137 pseudo LOC102022197 ribose-phosphate pyrophosphokinase 2 pseudogene NW_004955420 10011213 10017218 - 102022197 AGCD01020772 MODEL 8974501 protein-coding Snf8 SNF8 subunit of ESCRT-II ENCODES a protein that exhibits channel regulator activity (ortholog); lipid binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endocytic recycling (ortholog); macroautophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Agenesis of Corpus Callosum (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endosome membrane (ortholog) NW_004955451 12396625 12406014 + 102029141 AGCD01043392;GBDI01006108;XM_005394225 XP_005394282 MODEL 8710011 protein-coding LOC102016171 olfactory receptor 7A17-like NW_004955495 8434964 8435920 + 102016171 AGCD01062208;XM_005406108 XP_005406165 MODEL 39132834 snrna U6 U6 spliceosomal RNA 8856885 protein-coding Dnaja2 DnaJ heat shock protein family (Hsp40) member A2 ENCODES a protein that exhibits ATPase activator activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN carbon tetrachloride metabolic process (ortholog); protein refolding (ortholog); PARTICIPATES IN androgen signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955474 8180995 8202169 + 102011534 AGCD01054544;AGCD01054545;GBDF01004147;XM_005401411 XP_005401468 MODEL 8797824 pseudo LOC102018086 glyceraldehyde-3-phosphate dehydrogenase pseudogene NW_004955472 5347652 5348320 - 102018086 AGCD01053576 MODEL 8938727 protein-coding LOC102008010 melanoma-associated antigen 10-like NW_004955498 7052955 7064840 - 102008010 AGCD01063141;AGCD01063142;GBDF01251926;XM_013505532;XM_013505533;XM_013505534;XM_013505535 XP_013360986;XP_013360987;XP_013360988;XP_013360989 MODEL 8756018 protein-coding LOC102003925 protein FAM127A NW_004955602 174103 174639 - 102003925 AGCD01076766;GBCB01040403;XM_005414829 XP_005414886 MODEL 8932772 pseudo LOC102012710 GTP:AMP phosphotransferase AK3, mitochondrial pseudogene NW_004955402 34583997 34587079 + 102012710 AGCD01000866 MODEL 8838227 protein-coding Slc10a4 solute carrier family 10 member 4 ENCODES a protein that exhibits bile acid:sodium symporter activity (ortholog); INVOLVED IN adult behavior (ortholog); regulation of neurotransmitter loading into synaptic vesicle (ortholog); response to xenobiotic stimulus (ortholog); FOUND IN cholinergic synapse (ortholog); dopaminergic synapse (ortholog); plasma membrane (ortholog) NW_004955447 19189516 19194982 - 102012704 AGCD01041205;GBCE01165455;GBCQ01088285;XM_005392971 XP_005393028 MODEL 39132895 snrna U5 U5 spliceosomal RNA 8842401 ncrna LOC102009483 uncharacterized LOC102009483 NW_004955412 27560591 27578228 + 102009483 AGCD01013240;AGCD01013241;GBDK01345407;XR_260029 MODEL 8878856 protein-coding LOC102014258 mortality factor 4-like protein 1 NW_004955422 14066167 14067136 + 102014258 AGCD01022848;XM_013513833 XP_013369287 MODEL 8874124 protein-coding Ilk integrin linked kinase ENCODES a protein that exhibits ATP binding (ortholog); integrin binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament network formation (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH cardiomyopathy (ortholog); Cocaine-Related Disorders (ortholog); Colonic Polyps (ortholog); FOUND IN axon (ortholog); cell-cell junction (ortholog); centrosome (ortholog) NW_004955414 22316243 22322979 + 102027399 AGCD01015452;GBDF01047463;XM_005380164 XP_005380221 MODEL 8983859 protein-coding Thap6 THAP domain containing 6 ASSOCIATED WITH Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); urinary bladder cancer (ortholog); FOUND IN microtubule cytoskeleton (ortholog) NW_004955474 1481669 1491904 + 102008937 AGCD01054256;GBDF01081168;XM_005401316 XP_005401373 MODEL 8830410 protein-coding Kif3a kinesin family member 3A ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); kinesin binding (ortholog); microtubule binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); anterograde dendritic transport (ortholog); anterograde dendritic transport of neurotransmitter receptor complex (ortholog); PARTICIPATES IN Hedgehog signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic disease (ortholog); asthma (ortholog); FOUND IN axon cytoplasm (ortholog); axoneme (ortholog); centriole (ortholog) NW_004955408 4072823 4115975 - 102030602 AGCD01008086;AGCD01008087;AGCD01008088;GBDF01053282;XM_005376105;XM_005376106;XM_005376107 XP_005376162;XP_005376163;XP_005376164 MODEL 39131336 protein-coding TOPORS TOP1 binding arginine/serine rich protein 730469142 misc_rna H19_2 H19 conserved region 2 8984391 ncrna LOC102005357 uncharacterized LOC102005357 NW_004955413 23947369 23962983 + 102005357 AGCD01014341;AGCD01014342;AGCD01014343;GBCQ01160344;XR_260102 MODEL 8915618 protein-coding LOC102018897 uncharacterized LOC102018897 NW_004955458 9971865 9973728 + 102018897 AGCD01047669;GBDF01150755;XM_005397436 XP_005397493 MODEL 39132104 snrna U6 U6 spliceosomal RNA 8940178 ncrna LOC102009915 uncharacterized LOC102009915 NW_004955458 5401003 5402675 + 102009915 AGCD01047487;GBBH01073358;XR_262984 MODEL 9023022 protein-coding Nsun6 NOP2/Sun RNA methyltransferase 6 ENCODES a protein that exhibits tRNA (cytidine-N5)-methyltransferase activity (ortholog); tRNA binding (ortholog); INVOLVED IN tRNA C5-cytosine methylation (ortholog); tRNA methylation (ortholog); tRNA modification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal recessive intellectual developmental disorder 82 (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog) NW_004955429 9594964 9639614 + 102022519 AGCD01028651;AGCD01028652;GBBH01135357;XM_005386941;XM_005386943 XP_005386998;XP_005387000 MODEL 8936567 protein-coding Get1 guided entry of tail-anchored proteins factor 1 INVOLVED IN otic vesicle development (ortholog); post-translational protein targeting to endoplasmic reticulum membrane (ortholog); protein insertion into ER membrane (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); GET complex (ortholog) NW_004955407 38160951 38168808 + 102022784 AGCD01007798;GBDF01120917;XM_005375768 XP_005375825 MODEL 8733730 protein-coding Slc25a43 solute carrier family 25 member 43 ASSOCIATED WITH acute myeloid leukemia (ortholog); nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955534 513757 548027 - 102012576 AGCD01070456;GBCQ01100708;XM_005410446 XP_005410503 MODEL 8865325 protein-coding Lcn12 lipocalin 12 ENCODES a protein that exhibits retinoic acid binding (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 14 (ortholog); lung cancer (ortholog); ovarian cancer (ortholog) NW_004955513 4997015 5003691 + 102027218 AGCD01066949;GBDF01113483;XM_005408566;XM_013506642;XM_013506643 XP_005408623;XP_013362096;XP_013362097 MODEL 8742077 protein-coding Gmeb2 glucocorticoid modulatory element binding protein 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH melanoma (ortholog); neuronal ceroid lipofuscinosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955528 603817 638698 + 102008026 AGCD01069540;GBBH01193408;XM_005409955;XM_013507500;XM_013507501 XP_005410012;XP_013362954;XP_013362955 MODEL 8717997 protein-coding Flnb filamin B ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to type II interferon (ortholog); epithelial cell morphogenesis (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Absent Patella (ortholog); acute myeloid leukemia (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN brush border (ortholog); cytosol (ortholog); focal adhesion (ortholog) NW_004955430 7680394 7832124 + 102020827 AGCD01029367;AGCD01029368;AGCD01029369;AGCD01029370;AGCD01029371;GBDF01196019;XM_005387431;XM_005387432;XM_005387433;XM_013515640 XP_005387488;XP_005387489;XP_005387490;XP_013371094 MODEL 9052000 pseudo LOC102009916 KATNB1-like protein 1 pseudogene NW_004955458 3895009 3896301 + 102009916 AGCD01047353 MODEL 8993411 protein-coding Scyl1 SCY1 like pseudokinase 1 INVOLVED IN inflammatory response (ortholog); intracellular protein localization (ortholog); neuron development (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Ataxia (ortholog); autosomal recessive spinocerebellar ataxia 21 (ortholog); FOUND IN cis-Golgi network (ortholog); COPI vesicle coat (ortholog); cytoplasm (ortholog) NW_004955422 19730224 19742348 - 102008232 AGCD01023030;AGCD01023031;GBCQ01036441;XM_005384488 XP_005384545 MODEL 8843480 protein-coding Yeats4 YEATS domain containing 4 ENCODES a protein that exhibits histone H3K18ac reader activity (ortholog); histone H3K27ac reader activity (ortholog); INVOLVED IN gene expression (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) NW_004955405 9677701 9706541 + 102024641 AGCD01004787;AGCD01004788;AGCD01004789;AGCD01004790;GBDI01290622;XM_005374299 XP_005374356 MODEL 8887229 ncrna LOC102019322 uncharacterized LOC102019322 NW_004955539 512748 523203 + 102019322 AGCD01071185;GBDF01010156;XR_264813 MODEL 9028340 protein-coding Tatdn2 TatD DNase domain containing 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); melanoma (ortholog) NW_004955561 1653471 1673260 + 102018344 AGCD01073859;AGCD01073860;AGCD01073861;GBCQ01005537;GBDF01127617;XM_005413068 XP_005413125 MODEL 8995171 pseudo LOC102020361 hydroxysteroid dehydrogenase-like protein 2 NW_004955429 12779665 12781865 + 102020361 AGCD01028730 MODEL 8862879 protein-coding LOC102003926 multidrug resistance protein 3 NW_004955607 307152 369339 + 102003926 AGCD01076983;AGCD01076984;XM_005414906;XM_013510114 XP_005414963;XP_013365568 MODEL 8994423 protein-coding LOC102023249 T-cell surface glycoprotein CD1b3-like NW_004955468 10119937 10124011 + 102023249 AGCD01052067;GBBH01190249;XM_005400143;XM_005400144;XM_013522489 XP_005400200;XP_005400201;XP_013377943 MODEL 8744166 protein-coding LOC102010724 putative inactive carboxylesterase 4 NW_004955433 13538663 13552591 - 102010724 AGCD01031695;XM_013516106 XP_013371560 MODEL 8852745 protein-coding Tor1a torsin family 1 member A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent protein folding chaperone (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); ERAD pathway (ortholog); intermediate filament cytoskeleton organization (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita-5 (ortholog); autosomal dominant intellectual developmental disorder 43 (ortholog); dystonia (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955513 30655 36299 - 102012790 AGCD01066810;GBDF01083639;XM_005408331 XP_005408388 MODEL 10183528 ncrna LOC106147372 uncharacterized LOC106147372 NW_004955547 2743734 2750342 + 106147372 AGCD01072294;GBBH01159998;XR_001232236 MODEL 8857378 protein-coding E2f1 E2F transcription factor 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN anoikis (ortholog); cellular response to fatty acid (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear chromosome (ortholog) NW_004955422 27638625 27643261 + 102003151 AGCD01023330;GBDF01187864;XM_013513814 XP_013369268 MODEL 8719462 protein-coding Lmna lamin A/C ENCODES a protein that exhibits identical protein binding (ortholog); protein phosphatase 1 binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular senescence (ortholog); DNA double-strand break attachment to nuclear envelope (ortholog); PARTICIPATES IN atherosclerosis pathway; ASSOCIATED WITH achalasia (ortholog); anxiety disorder (ortholog); aortic valve disease 2 (ortholog); FOUND IN lamin filament (ortholog); nuclear envelope (ortholog); nuclear lamina (ortholog) NW_004955545 2290076 2310982 + 102018770 AGCD01071894;AGCD01071895;GBBH01034310;XM_005411648;XM_013508332 XP_005411705;XP_013363786 MODEL 39132679 snrna U6 U6 spliceosomal RNA 39133065 snrna U6 U6 spliceosomal RNA 39131947 snrna U1 U1 spliceosomal RNA 9034594 protein-coding Snip1 Smad nuclear interacting protein 1 ENCODES a protein that exhibits transcription regulator inhibitor activity (ortholog); INVOLVED IN miRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); migraine (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) NW_004955452 15352080 15365545 - 102011397 AGCD01044486;GBDF01082251;XM_005395208 XP_005395265 MODEL 8851316 protein-coding Faah fatty acid amide hydrolase ENCODES a protein that exhibits amidase activity (ortholog); fatty acid amide hydrolase activity (ortholog); hydrolase activity, acting on ester bonds (ortholog); INVOLVED IN fatty acid catabolic process (ortholog); fatty acid metabolic process (ortholog); monoacylglycerol catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); cocaine dependence (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); presynapse (ortholog) NW_004955464 11873368 11885366 - 102003743 AGCD01050161;AGCD01050162;AGCD01050163;GBCB01043365;GBDJ01228395;XM_013521588 XP_013377042 MODEL 9020822 pseudo LOC102016174 brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 pseudogene NW_004955502 7728610 7730040 - 102016174 AGCD01064460 MODEL 9002664 protein-coding LOC102025400 uncharacterized LOC102025400 NW_004955559 1652096 1655783 + 102025400 AGCD01073657;AGCD01073658;GBCB01053609;XM_005412913;XM_005412914 XP_005412970;XP_005412971 MODEL 8700157 protein-coding Brdt bromodomain testis associated ENCODES a protein that exhibits histone binding (ortholog); histone H4 reader activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); male meiosis I (ortholog); male meiotic nuclear division (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH azoospermia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955423 2434146 2498523 - 102027081 AGCD01023473;AGCD01023474;AGCD01023475;AGCD01023476;AGCD01023477;GBDF01048977;XM_005385061;XM_013514358;XM_013514359 XP_005385118;XP_013369812;XP_013369813 MODEL 39132837 snrna U6 U6 spliceosomal RNA 9034690 protein-coding Tdrkh tudor and KH domain containing INVOLVED IN fertilization (ortholog); male meiotic nuclear division (ortholog); piRNA processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); axonal neuropathy (ortholog); azoospermia (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); pi-body (ortholog) NW_004955589 630989 649936 + 102014846 AGCD01076179;GBDF01288647;XM_005414552;XM_005414553;XM_013509940;XM_013509941;XM_013509942;XM_013509943;XM_013509944 XP_005414609;XP_005414610;XP_013365394;XP_013365395;XP_013365396;XP_013365397;XP_013365398 MODEL 9049951 protein-coding Synm synemin ENCODES a protein that exhibits intermediate filament binding (ortholog); structural constituent of cytoskeleton (ortholog); structural constituent of muscle (ortholog); INVOLVED IN fast-twitch skeletal muscle fiber contraction (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); high grade glioma (ortholog); lung cancer (ortholog); FOUND IN costamere (ortholog); intermediate filament (ortholog); intermediate filament cytoskeleton (ortholog) NW_004955416 26554074 26579804 + 102018727 AGCD01017598;AGCD01017599;GBCE01037253;XM_013512539 XP_013367993 MODEL 8931707 ncrna LOC102021485 uncharacterized LOC102021485 NW_004955437 18547542 18548483 - 102021485 AGCD01034802;GBDJ01307924;XR_261893 MODEL 8716520 protein-coding LOC102003601 EKC/KEOPS complex subunit LAGE3-like NW_004955585 4764 6040 + 102003601 AGCD01075987;XM_005414426 XP_005414483 MODEL 8824296 protein-coding Rab7a RAB7A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); bone resorption (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN autophagy pathway; interleukin-12 signaling pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 2B (ortholog); genetic disease (ortholog); FOUND IN alveolar lamellar body (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) NW_004955429 15103792 15167498 - 102021694 AGCD01028794;AGCD01028795;AGCD01028796;GBBH01004537;XM_013515507 XP_013370961 MODEL 8894040 protein-coding Thap7 THAP domain containing 7 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); general transcription initiation factor binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN chromatin organization (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH sarcoma (ortholog); thymoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN chromatin (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) NW_004955442 19311307 19313779 + 102022025 AGCD01038052;GBDF01090370;XM_005391822 XP_005391879 MODEL 8969669 protein-coding LOC102020366 uncharacterized LOC102020366 NW_004955431 22145724 22192946 - 102020366 AGCD01030511;GBCE01160470;XM_013515756 XP_013371210 MODEL 9020570 protein-coding LOC102005359 olfactory receptor 10J1-like NW_004955468 11069935 11070873 - 102005359 AGCD01052113;XM_005400167 XP_005400224 MODEL 9000038 protein-coding LOC102004660 spermatogenesis-associated protein 31E1-like NW_004955637 27177 28652 - 102004660 AGCD01077641;GBDF01002545;GBDF01006017;XM_013510170 XP_013365624 MODEL 8913736 protein-coding Saxo6 stabilizer of axonemal microtubules 6 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN negative regulation of centriole replication (ortholog); retina development in camera-type eye (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN axoneme (ortholog); centriolar satellite (ortholog); centriole (ortholog) NW_004955458 14789842 14823117 - 102029593 AGCD01047847;AGCD01047848;AGCD01047849;GBDF01122670;XM_005397470;XM_005397471;XM_005397474;XM_013521000;XM_013521002;XM_013521003;XM_013521004;XM_013521005;XM_013521006 XP_005397527;XP_005397528;XP_005397531;XP_013376454;XP_013376456;XP_013376457;XP_013376458;XP_013376459;XP_013376460 MODEL 8708958 protein-coding CYTB cytochrome b MT 14163 15302 + 15822234 JX312692 AFQ55789;YP_008080757 REVIEWED 8713559 protein-coding Ttc36 tetratricopeptide repeat domain 36 ENCODES a protein that exhibits protein sequestering activity (ortholog); INVOLVED IN central nervous system neuron development (ortholog); memory (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog) NW_004955412 19670590 19672495 + 102019157 AGCD01012968;GBCQ01033714;XM_013511203 XP_013366657 MODEL 9033008 protein-coding Ltbp4 latent transforming growth factor beta binding protein 4 ENCODES a protein that exhibits transforming growth factor beta binding (ortholog); INVOLVED IN elastic fiber assembly (ortholog); hormone secretion (ortholog); transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN extracellular matrix (ortholog); microfibril (ortholog) NW_004955578 685960 712809 - 102010430 AGCD01075492;AGCD01075493;GBCB01003950;XM_005414039 XP_005414096 MODEL 8755049 protein-coding Lcn6 lipocalin 6 INVOLVED IN acrosome reaction (ortholog); calcium ion homeostasis (ortholog); cell maturation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); developmental and epileptic encephalopathy 14 (ortholog) NW_004955513 4860420 4863716 - 102022729 AGCD01066943;GBBH01173461;XM_013506588 XP_013362042 MODEL 8772275 ncrna LOC102012713 uncharacterized LOC102012713 NW_004955599 522218 526724 - 102012713 AGCD01076655;GBDI01339273;XR_001232551;XR_001232552;XR_265154 MODEL 8841385 ncrna LOC102008011 uncharacterized LOC102008011 NW_004955426 3353899 3375511 + 102008011 AGCD01026078;GBDI01255537;XR_261184;XR_261185 MODEL 8810919 protein-coding Slc10a5 solute carrier family 10 member 5 NW_004955417 40256 48658 - 102023355 AGCD01017784;AGCD01017785;GBCQ01072959;XM_005381715 XP_005381772 MODEL 8924526 protein-coding Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 ENCODES a protein that exhibits ATP-dependent protein folding chaperone (ortholog); DNA-binding transcription factor binding (ortholog); GTPase regulator activity (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); apoptotic process (ortholog); cellular senescence (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN actin filament (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955442 12971031 13002605 - 102010950 AGCD01037753;GBCB01002868;XM_005391293;XM_005391294 XP_005391350;XP_005391351 MODEL 9024072 protein-coding LOC102009925 olfactory receptor 8B12-like NW_004955412 25567776 25568708 - 102009925 AGCD01013160;XM_005378426 XP_005378483 MODEL 8777760 ncrna LOC102014263 uncharacterized LOC102014263 NW_004955425 3158459 3207750 - 102014263 AGCD01025281;AGCD01025282;GBDF01056331;XR_261122 MODEL 39132838 snrna U6 U6 spliceosomal RNA 8723724 protein-coding Slu7 spliceosome associated SLU7 ENCODES a protein that exhibits pre-mRNA 3'-splice site binding (ortholog); second spliceosomal transesterification activity (ortholog); zinc ion binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cellular response to heat (ortholog); intracellular protein transport (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) NW_004955408 14268958 14288114 - 102027148 AGCD01008391;GBDJ01087934;XM_005376265 XP_005376322 MODEL 40834594 protein-coding H2BC1 H2B clustered histone 1 8849822 protein-coding Kif3b kinesin family member 3B ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); microtubule binding (ortholog); small GTPase binding (ortholog); INVOLVED IN anterograde dendritic transport of neurotransmitter receptor complex (ortholog); cilium assembly (ortholog); intraciliary transport (ortholog); ASSOCIATED WITH cervical cancer (ortholog); fundus dystrophy (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cilium (ortholog) NW_004955422 28738567 28779584 - 102009622 AGCD01023368;GBDJ01272072;XM_005384873;XM_005384874;XM_013514112 XP_005384930;XP_005384931;XP_013369566 MODEL 8805272 pseudo LOC102018898 60S ribosomal protein L21 pseudogene NW_004955458 2628825 2629154 - 102018898 AGCD01047240;XM_005397497 MODEL 9006428 protein-coding Tdrp testis development related protein INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH uterine carcinosarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955403 58694134 58714440 + 102016875 AGCD01003190;GBBH01208696;XM_005373863;XM_013515063 XP_005373920;XP_013370517 MODEL 39132105 snrna U6 U6 spliceosomal RNA 8978578 ncrna LOC102013074 uncharacterized LOC102013074 NW_004955414 17753092 17757875 - 102013074 AGCD01015251;GBCQ01015489;XR_260179 MODEL 9032369 protein-coding LOC102010725 early placenta insulin-like peptide NW_004955434 9375953 9378354 - 102010725 AGCD01032299;GBDJ01223750;XM_005388747 XP_005388804 MODEL 8939040 protein-coding LOC102023253 olfactory receptor 52E1-like NW_004955414 20701545 20702480 + 102023253 AGCD01015387;XM_013511764 XP_013367218 MODEL 8855668 protein-coding Get3 guided entry of tail-anchored proteins factor 3, ATPase ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein carrier activity (ortholog); INVOLVED IN tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Dilated Cardiomyopathy 2H (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); GET complex (ortholog) NW_004955415 31836294 31843046 + 102020559 AGCD01016698;GBDF01003381;XM_005381023 XP_005381080 MODEL 10086777 ncrna LOC106147373 uncharacterized LOC106147373 NW_004955547 2258349 2259875 - 106147373 AGCD01072264;GBDK01059861;XR_001232237 MODEL 8991062 pseudo LOC102018089 methyltransferase-like protein 17, mitochondrial NW_004955416 190699 192939 + 102018089 AGCD01016780 MODEL 8820927 protein-coding Cyth1 cytohesin 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN establishment of epithelial cell polarity (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); regulation of cell adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955506 3920803 3997012 + 102005281 AGCD01065321;AGCD01065322;AGCD01065323;AGCD01065324;GBBH01209744;XM_005407370;XM_013506064;XM_013506065 XP_005407427;XP_013361518;XP_013361519 MODEL 39132899 snrna U5 U5 spliceosomal RNA 8790293 protein-coding Flnc filamin C ENCODES a protein that exhibits ankyrin binding (ortholog); cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN muscle cell development (ortholog); sarcomere organization (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); sarcolemma (ortholog) NW_004955479 9633817 9661725 + 102003129 AGCD01056485;GBCB01006284;XM_005402388;XM_005402389;XM_005402390;XM_005402391 XP_005402445;XP_005402446;XP_005402447;XP_005402448 MODEL 8988098 protein-coding Faah2 fatty acid amide hydrolase 2 ENCODES a protein that exhibits fatty acid amide hydrolase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 16 (ortholog); Breast Cancer, Familial (ortholog) NW_004955475 3593062 3734920 - 102029856 AGCD01054847;AGCD01054848;AGCD01054849;AGCD01054850;AGCD01054851;AGCD01054852;GBDK01429828;XM_005401548 XP_005401605 MODEL 8735215 protein-coding LOC102019324 tubulin beta-3 chain NW_004955541 3390452 3401774 + 102019324 AGCD01071442;AGCD01071443;GBBH01225915;XM_005411071 XP_005411128 MODEL 9036180 protein-coding Ilkap ILK associated serine/threonine phosphatase ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN protein dephosphorylation (ortholog); regulation of nuclear cell cycle DNA replication (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog) NW_004955542 2391432 2407559 + 102015769 AGCD01071522;GBCQ01094302;GBDF01124379;XM_013508014 XP_013363468 MODEL 9030809 protein-coding Synpo synaptopodin ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN positive regulation of actin filament bundle assembly (ortholog); postsynaptic modulation of chemical synaptic transmission (ortholog); regulation of long-term neuronal synaptic plasticity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); chronic kidney disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cell periphery (ortholog); cytosol (ortholog) NW_004955415 3929781 3977769 - 102025681 AGCD01015959;AGCD01015960;AGCD01015961;AGCD01015962;GBBH01187369;GBDJ01420980;XM_013512349 XP_013367803 MODEL 8716258 protein-coding Nsun7 NOP2/Sun RNA methyltransferase family member 7 INVOLVED IN flagellated sperm motility (ortholog); sperm flagellum assembly (ortholog); sperm mitochondrion organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); male infertility (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); sperm flagellum (ortholog) NW_004955443 6788155 6830659 - 102016109 AGCD01038263;AGCD01038264;GBBH01061569;XM_005391949;XM_013518051 XP_005392006;XP_013373505 MODEL 39132840 snrna U6 U6 spliceosomal RNA 39132680 snrna U6 U6 spliceosomal RNA 8699553 protein-coding LOC102005362 olfactory receptor 51I2 NW_004955414 21355079 21356017 + 102005362 AGCD01015416;XM_005380086 XP_005380143 MODEL 9056150 protein-coding Tor1aip1 torsin 1A interacting protein 1 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN nuclear membrane organization (ortholog); protein localization to nuclear envelope (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2Y (ortholog); Breast Cancer, Familial (ortholog); centronuclear myopathy (ortholog); FOUND IN nuclear envelope (ortholog); nuclear inner membrane (ortholog); nuclear membrane (ortholog) NW_004955406 19122906 19152458 + 102005890 AGCD01006074;AGCD01006075;GBDF01085103;XM_005374964;XM_005374965;XM_013521233;XM_013521240;XM_013521241;XM_013521247;XM_013521257 XP_005375021;XP_005375022;XP_013376687;XP_013376694;XP_013376695;XP_013376701;XP_013376711 MODEL 8907890 protein-coding Slc25a44 solute carrier family 25 member 44 ENCODES a protein that exhibits branched-chain amino acid transmembrane transporter activity (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); branched-chain amino acid transport (ortholog); regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955545 2347951 2364935 + 102023077 AGCD01071897;AGCD01071898;GBBH01172218;XM_005411661;XM_013508274 XP_005411718;XP_013363728 MODEL 8934066 pseudo LOC102010726 radixin pseudogene NW_004955435 6868094 6869629 - 102010726 AGCD01032938 MODEL 8841585 pseudo LOC102016175 transcription elongation factor A protein-like 2 NW_004955503 8205063 8207037 - 102016175 AGCD01064812 MODEL 8988738 protein-coding Snn stannin ENCODES a protein that exhibits metal ion binding (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); mitochondrial outer membrane (ortholog) NW_004955442 6959325 6969268 - 102026264 AGCD01037608;GBCE01186579;XM_005391160 XP_005391217 MODEL 8753209 protein-coding LOC102025404 leukocyte immunoglobulin-like receptor subfamily A member 6 NW_004955567 1318000 1322175 - 102025404 AGCD01074467;GBDK01305379;XM_013509219 XP_013364673 MODEL 8828251 protein-coding E2f2 E2F transcription factor 2 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); lens fiber cell apoptotic process (ortholog); negative regulation of sprouting angiogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Disease Progression (ortholog); esophageal cancer (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955452 3498077 3518033 - 102016226 AGCD01043927;AGCD01043928;GBBH01166880;XM_005394765;XM_005394766 XP_005394822;XP_005394823 MODEL 8730800 protein-coding Ttc38 tetratricopeptide repeat domain 38 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955413 30391385 30411210 + 102010791 AGCD01014608;GBCE01001497;XM_005379507;XM_013511392 XP_005379564;XP_013366846 MODEL 8715733 protein-coding Yes1 YES proto-oncogene 1, Src family tyrosine kinase ENCODES a protein that exhibits enzyme binding (ortholog); epidermal growth factor receptor binding (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN cellular response to platelet-derived growth factor stimulus (ortholog); cellular response to retinoic acid (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN actin filament (ortholog); anchoring junction (ortholog); cell junction (ortholog) NW_004955402 9199704 9255183 + 102021819 AGCD01000209;AGCD01000210;AGCD01000211;GBDF01249763;XM_005372669 XP_005372726 MODEL 8963910 protein-coding Brf1 BRF1 general transcription factor IIIB subunit INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); regulation of mRNA stability (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Cardiomegaly (ortholog) NW_004955538 3469322 3544704 - 102005507 AGCD01071164;AGCD01071165;AGCD01071166;AGCD01071167;AGCD01071168;AGCD01071169;GBCB01026253;GBDI01136185;XM_005410860 XP_005410917 MODEL 8774884 protein-coding Lcn8 lipocalin 8 INVOLVED IN response to hormone (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); developmental and epileptic encephalopathy 14 (ortholog); hepatocellular carcinoma (ortholog) NW_004955513 4877845 4879978 - 102028452 AGCD01066943;XM_013506582 XP_013362036 MODEL 8767344 protein-coding LOC102022198 sperm-associated antigen 4 protein-like NW_004955422 29464795 29468790 + 102022198 AGCD01023397;GBDF01000375;XM_005384914;XM_005384915;XM_005384916;XM_005384917 XP_005384971;XP_005384972;XP_005384973;XP_005384974 MODEL 39133066 snrna U6 U6 spliceosomal RNA 9038563 protein-coding LOC102020372 uncharacterized LOC102020372 NW_004955527 2368171 2373713 + 102020372 AGCD01069433;GBDF01182599;XM_005409896 XP_005409953 MODEL 9048353 protein-coding LOC102003603 polyadenylate-binding protein 1-like 2 NW_004955591 918513 919451 - 102003603 AGCD01076286;XM_005414600 XP_005414657 MODEL 8968369 protein-coding Lmnb1 lamin B1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); phospholipase binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to 2,3,7,8-tetrachlorodibenzodioxine (ortholog); cellular response to corticosterone stimulus (ortholog); cellular response to L-glutamate (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adult onset demyelinating leukodystrophy (ortholog); Animal Disease Models (ortholog); FOUND IN lamin filament (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) NW_004955521 4583691 4612271 + 102020157 AGCD01068273;GBBH01026773;XM_013507092 XP_013362546 MODEL 39131989 snrna U1 U1 spliceosomal RNA 8923284 protein-coding Kif3c kinesin family member 3C ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); INVOLVED IN positive regulation of neuron projection development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); atrial fibrillation (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); growth cone (ortholog) NW_004955469 7960224 8001161 - 102008840 AGCD01052441;AGCD01052442;GBDJ01220336;XM_005400416 XP_005400473 MODEL 8796021 protein-coding LOC102004662 interleukin-3 receptor subunit alpha-like NW_004956002 9149 9686 - 102004662 AGCD01078846;GBCE01069509;GBDK01099765;XM_005415160 XP_005415217 MODEL 9009336 protein-coding Gmfb glia maturation factor beta INVOLVED IN learning (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955409 8969398 8984008 + 102030607 AGCD01009426;GBDF01085214;XM_005376765 XP_005376822 MODEL 8754400 ncrna LOC102023254 uncharacterized LOC102023254 NW_004955470 9123134 9132267 - 102023254 AGCD01052835;GBDF01224252;XR_263478 MODEL 9061053 protein-coding Scyl2 SCY1 like pseudokinase 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN brain development (ortholog); clathrin-dependent endocytosis (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita-4 (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN endosome membrane (ortholog) NW_004955405 35984667 36043581 + 102020749 AGCD01005407;AGCD01005408;GBDF01119404;XM_005374529;XM_005374530 XP_005374586;XP_005374587 MODEL 8769203 protein-coding Tatdn3 TatD DNase domain containing 3 ENCODES a protein that exhibits DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); single-stranded DNA 3'-5' DNA exonuclease activity (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955406 4741448 4764410 - 102019136 AGCD01005702;AGCD01005703;AGCD01005704;GBDI01353936;XM_005374737;XM_005374738 XP_005374794;XP_005374795 MODEL 8944003 ncrna LOC102008014 uncharacterized LOC102008014 NW_004955427 4746086 4759360 - 102008014 AGCD01026973;GBDF01305344;XR_261235 MODEL 8700907 protein-coding LOC102003927 PRAME family member 20-like NW_004955615 78379 80979 - 102003927 AGCD01077249;XM_013510138 XP_013365592 MODEL 8729807 protein-coding LOC102021486 uncharacterized LOC102021486 NW_004955538 2766334 2771809 - 102021486 AGCD01071138;AGCD01071139;GBBH01020607;XM_005410822;XM_005410823;XM_013507898 XP_005410879;XP_005410880;XP_013363352 MODEL 39132910 snrna U5 U5 spliceosomal RNA 8966086 pseudo LOC102014264 ribosome biogenesis protein BRX1 homolog NW_004955502 5831939 5852642 + 102014264 AGCD01064380 MODEL 8871834 protein-coding LOC102025405 translation initiation factor IF-2-like NW_004955445 7021605 7022894 - 102025405 AGCD01039531;AGCD01039532;GBDF01047850;XM_005392570 XP_005392627 MODEL 8874476 protein-coding LOC102009926 chromosome unknown open reading frame, human C12orf57 INVOLVED IN camera-type eye morphogenesis (ortholog); cognition (ortholog); corpus callosum morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog) NW_004955413 4524236 4525760 + 102009926 AGCD01013621;GBDI01019226;XM_005378850 XP_005378907 MODEL 8955917 protein-coding Flot1 flotillin 1 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); protease binding (ortholog); INVOLVED IN adherens junction organization (ortholog); axonogenesis (ortholog); caveola assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN adherens junction (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) NW_004955583 717246 729924 - 102018347 AGCD01075855;AGCD01075856;AGCD01075857;GBDJ01001358;GBDK01004420;XM_005414316 XP_005414373 MODEL 8931125 protein-coding Thap8 THAP domain containing 8 ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955468 2545327 2559106 + 102010888 AGCD01051825;AGCD01051826;AGCD01051827;GBDK01230411;XM_005399924 XP_005399981 MODEL 8976324 pseudo LOC102018899 39S ribosomal protein L47, mitochondrial-like NW_004955409 7916768 7917852 - 102018899 AGCD01009369 MODEL 39132106 snrna U6 U6 spliceosomal RNA 8877137 pseudo LOC102009484 signal peptide peptidase-like 3 pseudogene NW_004955412 33749516 33760698 + 102009484 AGCD01013370 MODEL 8952133 protein-coding H3f3a H3 histone, family 3A ENCODES a protein that exhibits nucleosomal DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II core promoter sequence-specific DNA binding (ortholog); INVOLVED IN nucleosome assembly (ortholog); positive regulation of cell growth (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH bone giant cell tumor (ortholog); Bryant-Li-Bhoj neurodevelopmental syndrome 1 (ortholog); capillary hemangioma (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); nucleoplasm (ortholog) NW_004955489 269900 278398 + 102010375 AGCD01059789;GBDF01010954;XM_005404492 XP_005404549 MODEL 8928033 protein-coding LOC102013077 olfactory receptor 6-like NW_004955414 22675950 22676894 - 102013077 AGCD01015469;XM_005380510 XP_005380567 MODEL 9065128 protein-coding Ltbr lymphotoxin beta receptor ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); myeloid dendritic cell differentiation (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH autosomal recessive pseudohypoaldosteronism type 1 (ortholog); cervical cancer (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog); tumor necrosis factor receptor superfamily complex (ortholog) NW_004955413 4031659 4038396 + 102013272 AGCD01013593;GBCE01084425;XM_005378761;XM_005378762 XP_005378818;XP_005378819 MODEL 10392037 protein-coding LOC106147374 serine/arginine repetitive matrix protein 1-like NW_004955548 159907 172195 + 106147374 AGCD01072321;AGCD01072322;GBDJ01352189;XM_013508518 XP_013363972 MODEL 9032189 protein-coding LOC102005363 olfactory receptor 10A4 NW_004955414 22800006 22800953 + 102005363 AGCD01015478;XM_005380181 XP_005380238 MODEL 8916131 pseudo LOC102012714 heterogeneous nuclear ribonucleoprotein A3-like NW_004955402 57336253 57364330 - 102012714 AGCD01001495 MODEL 8935611 pseudo LOC102004666 zinc finger and SCAN domain-containing protein 4-like NW_004955405 11735072 11756169 - 102004666 AGCD01004838;AGCD01004839;AGCD01004840;AGCD01004841 MODEL 8714452 protein-coding Faap100 FA core complex associated protein 100 ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); nucleoplasm (ortholog) NW_004955506 1515908 1525660 + 102004187 AGCD01065269;GBDK01145858;XM_005407273;XR_264322 XP_005407330 MODEL 8923775 protein-coding Slc10a6 solute carrier family 10 member 6 INVOLVED IN sodium-dependent organic anion transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955474 2949773 2982458 + 102030188 AGCD01054315;AGCD01054316;AGCD01054317;AGCD01054318;GBCE01042605;XM_013502783 XP_013358237 MODEL 8997946 protein-coding Cyth2 cytohesin 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); endosome organization (ortholog); negative regulation of dendrite development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN bicellular tight junction (ortholog); BLOC-1 complex (ortholog); cell body (ortholog) NW_004955559 2014740 2021234 - 102010101 AGCD01073686;GBDF01002920;XM_013509039;XM_013509040 XP_013364493;XP_013364494 MODEL 8825954 protein-coding Rab7b RAB7B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); late endosome to Golgi transport (ortholog); negative regulation of toll-like receptor 4 signaling pathway (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); osteoporosis (ortholog); FOUND IN Golgi apparatus (ortholog); late endosome (ortholog); lysosome (ortholog) NW_004955406 41615302 41638157 - 102015373 AGCD01006688;GBDK01084519;XM_005375379;XM_005375380 XP_005375436;XP_005375437 MODEL 8865947 ncrna LOC102019329 uncharacterized LOC102019329 NW_004955441 8184704 8197646 + 102019329 AGCD01036977;AGCD01036978;GBDJ01402532;XR_262057 MODEL 8986239 protein-coding Saysd1 SAYSVFN motif domain containing 1 ENCODES a protein that exhibits UFM1-modified protein reader activity (ortholog); INVOLVED IN protein quality control for misfolded or incompletely synthesized proteins (ortholog); rescue of stalled cytosolic ribosome (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955437 4369140 4375405 + 102013002 AGCD01034364;GBDF01005767;XM_005389604 XP_005389661 MODEL 8703205 protein-coding Ilrun inflammation and lipid regulator with UBA-like and NBR1-like domains INVOLVED IN negative regulation of defense response to virus (ortholog); negative regulation of protein localization to nucleus (ortholog); negative regulation of tumor necrosis factor production (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955437 2697998 2769998 - 102018326 AGCD01034284;AGCD01034285;GBDF01007654;GBDK01126877;XM_005389532 XP_005389589 MODEL 8907721 protein-coding Tead1 TEA domain transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); embryonic heart tube morphogenesis (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); TEAD-YAP complex (ortholog) NW_004955414 28166562 28341275 + 102014888 AGCD01015678;AGCD01015679;GBDF01287292;XM_013511974;XM_013511975;XM_013511976;XM_013511977;XM_013511978;XM_013511979;XM_013511980;XM_013511981;XM_013511982;XM_013511983 XP_013367428;XP_013367429;XP_013367430;XP_013367431;XP_013367432;XP_013367433;XP_013367434;XP_013367435;XP_013367436;XP_013367437 MODEL 39132841 snrna U6 U6 spliceosomal RNA 8992464 protein-coding Get4 guided entry of tail-anchored proteins factor 4 ENCODES a protein that exhibits protein carrier activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN ERAD pathway (ortholog); post-translational protein targeting to endoplasmic reticulum membrane (ortholog); protein insertion into ER membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN BAT3 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955460 8620913 8634778 + 102013256 AGCD01048528;GBCB01004484;XM_005397792 XP_005397849 MODEL 8897489 protein-coding Nt5c 5', 3'-nucleotidase, cytosolic ENCODES a protein that exhibits 3'-nucleotidase activity (ortholog); 5'-nucleotidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN dAMP catabolic process (ortholog); dCMP catabolic process (ortholog); deoxyribonucleotide catabolic process (ortholog); PARTICIPATES IN gemcitabine pharmacodynamics pathway; gemcitabine pharmacokinetics pathway; lamivudine pharmacokinetics pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955553 2011549 2014209 - 102021487 AGCD01072911;GBDK01235340;XM_013508650;XM_013508651;XM_013508652 XP_013364104;XP_013364105;XP_013364106 MODEL 8721050 pseudo LOC102009927 centrin-3 pseudogene NW_004955467 10028525 10029023 + 102009927 AGCD01051543 MODEL 9032574 pseudo LOC102018901 mastermind-like protein 1 pseudogene NW_004955409 22975604 22978035 + 102018901 AGCD01010050 MODEL 39132107 snrna U6 U6 spliceosomal RNA 8959483 protein-coding Slurp1 secreted LY6/PLAUR domain containing 1 ENCODES a protein that exhibits acetylcholine receptor activator activity (ortholog); INVOLVED IN locomotory behavior (ortholog); negative regulation of cell migration (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH mal de Meleda (ortholog); ovarian serous cystadenocarcinoma (ortholog); palmoplantar keratosis (ortholog); FOUND IN extracellular region (ortholog) NW_004955454 1440534 1449123 - 102020752 AGCD01044969;GBDI01110694;XM_005395737;XM_005395738;XM_013520069 XP_005395794;XP_005395795;XP_013375523 MODEL 8867970 protein-coding Tor1b torsin family 1 member B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum organization (ortholog); nuclear membrane organization (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Prostate Cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955513 23118 29401 + 102012462 AGCD01066810;GBDJ01227651;XM_005408330 XP_005408387 MODEL 8929280 protein-coding LOC102010731 gap junction epsilon-1 protein NW_004955436 18085611 18087433 - 102010731 AGCD01033955;XM_005389256 XP_005389313 MODEL 8894134 protein-coding Ttc39a tetratricopeptide repeat domain 39A ASSOCIATED WITH Breast Cancer, Familial (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog) NW_004955464 7709669 7736484 + 102026088 AGCD01050068;GBDF01005076;GBDK01025507;XM_013521703 XP_013377157 MODEL 8983844 protein-coding Dnaja4 DnaJ heat shock protein family (Hsp40) member A4 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); INVOLVED IN negative regulation of endothelial cell migration (ortholog); negative regulation of inclusion body assembly (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) NW_004955450 757485 771033 + 102008481 AGCD01042344;GBDF01000161;XM_005393442 XP_005393499 MODEL 8982372 protein-coding Slc25a45 solute carrier family 25 member 45 ENCODES a protein that exhibits dimethylarginine transmembrane transporter activity (ortholog); N(6),N(6),N(6)-trimethyl-L-lysine transmembrane transporter activity (ortholog); INVOLVED IN amino acid transmembrane transport (ortholog); carnitine biosynthetic process (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955422 19854935 19864585 + 102010271 AGCD01023041;AGCD01023042;GBDK01101373;XM_005384496;XM_005384497 XP_005384553;XP_005384554 MODEL 10355889 protein-coding Ltc4s leukotriene C4 synthase ENCODES a protein that exhibits glutathione binding (ortholog); identical protein binding (ortholog); leukotriene-C4 synthase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to vitamin A (ortholog); leukotriene biosynthetic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH otitis media; Acute Liver Failure (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) NW_004955408 788856 791505 - 106147283 AGCD01007934;AGCD01007935;GBDI01259801;GBDJ01353516;XM_013507904 XP_013363358 MODEL 9052905 protein-coding E2f3 E2F transcription factor 3 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); negative regulation of fat cell proliferation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955483 6039569 6116000 - 102015522 AGCD01057768;AGCD01057769;GBBH01045634;GBCB01101037;XM_005403385 XP_005403442 MODEL 9033385 pseudo LOC102021495 vacuole membrane protein 1 pseudogene NW_004955446 12582761 12583969 - 102021495 AGCD01040238 MODEL 39132914 snrna U5 U5 spliceosomal RNA 8823529 protein-coding Lcn9 lipocalin 9 ASSOCIATED WITH Ehlers-Danlos syndrome classic type 1 (ortholog) NW_004955513 4786615 4788768 - 102021159 AGCD01066939;GBDF01055414;XM_005408546 XP_005408603 MODEL 8850321 protein-coding Synpo2 synaptopodin 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); alpha-actinin binding (ortholog); filamin binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); chaperone-mediated autophagy (ortholog); positive regulation of actin filament bundle assembly (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); ovarian carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) NW_004955428 21152210 21323254 - 102025603 AGCD01028133;AGCD01028134;AGCD01028135;GBDJ01019222;XM_005386805;XM_013515263 XP_005386862;XP_013370717 MODEL 8925021 pseudo LOC102014268 dnaJ homolog subfamily A member 1 pseudogene NW_004955428 10510547 10511683 - 102014268 AGCD01027868 MODEL 8847101 protein-coding Thap9 THAP domain containing 9 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); transposase activity (ortholog); INVOLVED IN DNA integration (ortholog); DNA recombination (ortholog); DNA transposition (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog) NW_004955433 6906034 6922832 + 102008139 AGCD01031555;AGCD01031556;AGCD01031557;GBBH01144757;GBDF01307948;XM_013516173 XP_013371627 MODEL 8847491 ncrna LOC102018090 uncharacterized LOC102018090 NW_004955416 20999242 21004789 + 102018090 AGCD01017482;GBDI01164565;XR_260400 MODEL 39131601 snrna U1 U1 spliceosomal RNA 9056296 protein-coding Lmnb2 lamin B2 ENCODES a protein that exhibits identical protein binding (ortholog); structural constituent of cytoskeleton (ortholog); ASSOCIATED WITH autosomal dominant primary microcephaly 27 (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN lamin filament (ortholog); nuclear envelope (ortholog); nuclear lamina (ortholog) NW_004955495 4826653 4851984 - 102009293 AGCD01061953;AGCD01061954;AGCD01061955;AGCD01061956;AGCD01061957;AGCD01061958;GBCB01086244;GBDI01188605;XM_013505227 XP_013360681 MODEL 8798102 protein-coding LOC102003605 protein FAM127A NW_004955602 144599 145888 + 102003605 AGCD01076763;AGCD01076764;GBBH01002232;GBCQ01009918;XM_005414828 XP_005414885 MODEL 8881227 pseudo LOC102009487 heterogeneous nuclear ribonucleoprotein A1-like NW_004955467 9990149 9991458 + 102009487 AGCD01051538 MODEL 616940640 snorna snoMBII-202 Small nucleolar RNA MBII-202 8833180 pseudo LOC102016181 ferritin light chain-like NW_004955428 13569667 13577405 - 102016181 AGCD01027959 MODEL 8821036 protein-coding Scyl3 SCY1 like pseudokinase 3 ENCODES a protein that exhibits identical protein binding (ortholog); kinase activity (ortholog); INVOLVED IN inflammatory response (ortholog); intracellular protein localization (ortholog); neuron development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) NW_004955462 7443841 7477596 + 102008386 AGCD01049305;GBDF01279049;XM_005398176;XM_005398178;XM_005398179;XM_005398180;XM_005398181 XP_005398233;XP_005398235;XP_005398236;XP_005398237;XP_005398238 MODEL 8904780 protein-coding Gmfg glia maturation factor gamma INVOLVED IN actin filament debranching (ortholog); negative regulation of Arp2/3 complex-mediated actin nucleation (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); lung cancer (ortholog) NW_004955468 213010 222464 + 102024545 AGCD01051685;GBDF01128679;GBDF01128690;XM_005399785;XM_013522379;XM_013522380 XP_005399842;XP_013377833;XP_013377834 MODEL 8864590 protein-coding LOC102023255 interleukin-36 beta-like NW_004955470 1290324 1294753 + 102023255 AGCD01052633;XM_005400824 XP_005400881 MODEL 10309696 pseudo LOC106147375 protein FAM126B pseudogene NW_004955548 2903786 2904473 - 106147375 AGCD01072411 MODEL 9045232 protein-coding LOC102012716 PRAME family member 23-like NW_004955618 152655 161495 - 102012716 AGCD01077302;AGCD01077303;AGCD01077304;XM_013510148 XP_013365602 MODEL 8716148 ncrna LOC102009929 uncharacterized LOC102009929 NW_004955468 11697494 11712294 + 102009929 AGCD01052137;GBBH01041129;XR_001236933;XR_263414;XR_263415 MODEL 8967388 ncrna LOC102008015 uncharacterized LOC102008015 NW_004955506 4275716 4276076 - 102008015 AGCD01065332;XR_264349 MODEL 8748440 pseudo LOC102022200 phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN pseudogene NW_004955498 2454830 2456075 - 102022200 AGCD01062795;XM_005406400 MODEL 8750318 protein-coding Tax1bp1 Tax1 binding protein 1 ENCODES a protein that exhibits kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); signaling adaptor activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of cytoplasmic pattern recognition receptor signaling pathway (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); phagophore assembly site (ortholog) NW_004955410 29366295 29445205 + 102009586 AGCD01011290;AGCD01011291;AGCD01011292;GBDI01008216;XM_005377466;XM_005377467;XM_013510614 XP_005377523;XP_005377524;XP_013366068 MODEL 8793200 protein-coding Brf2 BRF2 general transcription factor IIIB subunit ENCODES a protein that exhibits RNA polymerase III type 3 promoter sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); regulation of transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); transcription factor TFIIIB complex (ortholog) NW_004955463 13549571 13553946 - 102013483 AGCD01049871;GBDJ01061574;XM_013521531 XP_013376985 MODEL 8820318 protein-coding Sdad1 SDA1 domain containing 1 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog) NW_004955433 690305 717737 - 102008446 AGCD01031335;GBBH01025561;XM_005388162 XP_005388219 MODEL 8729961 pseudo LOC102025408 ferritin light chain pseudogene NW_004955447 14388461 14403890 + 102025408 AGCD01041003;XM_005392866;XM_005392867;XM_005392868;XM_005392869 MODEL 39132681 snrna U6 U6 spliceosomal RNA 8935973 protein-coding LOC102020373 interleukin-1 receptor accessory protein-like 1 NW_004955531 1088287 1356479 - 102020373 AGCD01070020;AGCD01070021;AGCD01070022;AGCD01070023;AGCD01070024;AGCD01070025;AGCD01070026;AGCD01070027;AGCD01070028;AGCD01070029;XM_013507557 XP_013363011 MODEL 8855819 protein-coding Lcnl1 lipocalin like 1 ASSOCIATED WITH COVID-19 (ortholog); uterine corpus endometrial carcinoma (ortholog) NW_004955513 5012879 5015482 + 102028323 AGCD01066950;GBDI01208694;XM_005415259 XP_005415316 MODEL 8719291 pseudo LOC102013084 cyclic AMP-dependent transcription factor ATF-4 pseudogene NW_004955417 10565016 10567924 - 102013084 AGCD01018079 MODEL 8919221 protein-coding Kif4a kinesin family member 4A INVOLVED IN mitotic cytokinesis (ortholog); mitotic spindle midzone assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Ataxia (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); midbody (ortholog) NW_004955475 9845633 9969965 + 102023469 AGCD01055075;AGCD01055076;AGCD01055077;AGCD01055078;AGCD01055079;GBDF01261503;XM_005401621 XP_005401678 MODEL 8700604 protein-coding H3f3b H3 histone, family 3B ENCODES a protein that exhibits nucleosomal DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II core promoter sequence-specific DNA binding (ortholog); INVOLVED IN nucleosome assembly (ortholog); positive regulation of cell growth (ortholog); response to hormone (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); autistic disorder (ortholog); Bryant-Li-Bhoj neurodevelopmental syndrome 2 (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); nucleoplasm (ortholog) NW_004955506 6475336 6478781 + 102012783 AGCD01065426;AY533212;FB335718;GBDF01023456;HH767057;NM_001282367 AAS59415;CAR80825;CBX84296;NP_001269296 PROVISIONAL 39131717 snrna U1 U1 spliceosomal RNA 8819300 ncrna LOC102003928 uncharacterized LOC102003928 NW_004955403 24016583 24021309 + 102003928 AGCD01002266;GBDK01211102;XR_259201 MODEL 8824914 protein-coding Slx1a structure-specific endonuclease subunit SLX1A ENCODES a protein that exhibits 5'-flap endonuclease activity (ortholog); crossover junction DNA endonuclease activity (ortholog); INVOLVED IN DNA double-strand break processing involved in repair via single-strand annealing (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH Fanconi-like syndrome (ortholog); FOUND IN nuclear chromosome (ortholog); nucleoplasm (ortholog); Slx1-Slx4 complex (ortholog) NW_004955493 6797913 6800555 - 102019283 AGCD01061140;AGCD01061141;GBBH01164343;GBDF01119426;XM_013504818 XP_013360272 MODEL 9005988 protein-coding Lmntd1 lamin tail domain containing 1 INVOLVED IN cell population proliferation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Lung Neoplasms (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear envelope (ortholog); nucleus (ortholog) NW_004955413 20508574 20771188 - 102030620 AGCD01014217;AGCD01014218;AGCD01014219;AGCD01014220;AGCD01014221;AGCD01014222;AGCD01014223;AGCD01014224;AGCD01014225;AGCD01014226;AGCD01014227;AGCD01014228;AGCD01014229;AGCD01014230;GBDF01210105;XM_005379102;XM_005379104;XM_005379105;XM_013511519;XM_013511520;XM_013511521 XP_005379159;XP_005379161;XP_005379162;XP_013366973;XP_013366974;XP_013366975 MODEL 39133067 snrna U6 U6 spliceosomal RNA 8743770 pseudo LOC102023261 dnaJ homolog subfamily B member 2-like NW_004955479 9427904 9428831 + 102023261 AGCD01056467 MODEL 8943443 protein-coding Cyth3 cytohesin 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN establishment of epithelial cell polarity (ortholog); Golgi vesicle transport (ortholog); positive regulation of cell adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cytoplasm (ortholog) NW_004955460 13439634 13492767 + 102023121 AGCD01048688;AGCD01048689;AGCD01048690;AGCD01048691;GBDF01181556;XM_013521212 XP_013376666 MODEL 8739733 protein-coding LOC102022201 melanoma-associated antigen 11-like NW_004955498 4031910 4032668 - 102022201 AGCD01062960;XM_005406480 XP_005406537 MODEL 8724846 protein-coding Flot2 flotillin 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); protease binding (ortholog); INVOLVED IN anterograde dendritic transport (ortholog); negative regulation of amyloid precursor protein catabolic process (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN acrosomal membrane (ortholog); adherens junction (ortholog); apical plasma membrane (ortholog) NW_004955481 4276847 4298523 + 102018287 AGCD01056933;GBBH01061429;XM_005402703;XM_005402704;XM_005402705;XM_005402707;XM_013503420 XP_005402760;XP_005402761;XP_005402762;XP_005402764;XP_013358874 MODEL 39132843 snrna U6 U6 spliceosomal RNA 8822797 protein-coding Tead2 TEA domain transcription factor 2 ENCODES a protein that exhibits disordered domain specific binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); embryonic heart tube morphogenesis (ortholog); hippo signaling (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); TEAD-YAP complex (ortholog); transcription regulator complex (ortholog) NW_004955559 1450706 1465947 + 102019746 AGCD01073646;GBDI01187808;XM_005412893;XM_005412894;XM_013509051;XM_013509052;XM_013509053 XP_005412950;XP_005412951;XP_013364505;XP_013364506;XP_013364507 MODEL 9039786 protein-coding Synpo2l synaptopodin 2 like INVOLVED IN heart morphogenesis (ortholog); positive regulation of Rho protein signal transduction (ortholog); positive regulation of stress fiber assembly (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog); Z disc (ortholog) NW_004955437 18177867 18186772 + 102015048 AGCD01034779;AGCD01034780;GBDF01020164;XM_005389968;XM_005389969 XP_005390025;XP_005390026 MODEL 8892522 protein-coding Rab8a RAB8A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN axonogenesis (ortholog); cellular response to insulin stimulus (ortholog); cilium assembly (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); rheumatoid arthritis (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) NW_004955524 1403811 1416005 - 102023187 AGCD01068749;GBBH01023807;XM_005409485 XP_005409542 MODEL 8943343 protein-coding Yif1a Yip1 interacting factor homolog A, membrane trafficking protein ASSOCIATED WITH cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); Liver Neoplasms (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) NW_004955422 19028871 19032850 + 102016065 AGCD01022972;GBDF01046174;XM_005384420;XM_005384421 XP_005384477;XP_005384478 MODEL 8768783 protein-coding Nt5c1a 5'-nucleotidase, cytosolic IA ENCODES a protein that exhibits 5'-deoxynucleotidase activity (ortholog); 5'-nucleotidase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN adenosine metabolic process (ortholog); allantoin metabolic process (ortholog); AMP catabolic process (ortholog); ASSOCIATED WITH melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955452 17172217 17188597 - 102026709 AGCD01044545;GBDI01386358;XM_005395255;XM_005395256;XM_005395257;XM_005395258;XM_005395259;XM_005395260;XM_005395261;XM_013519722;XM_013519723;XM_013519724 XP_005395312;XP_005395313;XP_005395314;XP_005395315;XP_005395316;XP_005395317;XP_005395318;XP_013375176;XP_013375177;XP_013375178 MODEL 8749875 protein-coding Gfap glial fibrillary acidic protein ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); kinase binding (ortholog); INVOLVED IN astrocyte development (ortholog); Bergmann glial cell differentiation (ortholog); D-aspartate import across plasma membrane (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; ASSOCIATED WITH Abdominal Pain (ortholog); alcohol use disorder (ortholog); Alexander disease (ortholog); FOUND IN astrocyte end-foot (ortholog); astrocyte projection (ortholog); cell body (ortholog) NW_004955451 17695835 17703894 - 102021410 AGCD01043767;GBDF01289667;XM_005394555;XM_005394556 XP_005394612;XP_005394613 MODEL 39132108 snrna U6 U6 spliceosomal RNA 8909101 pseudo LOC102018902 transcriptional repressor protein YY1 pseudogene NW_004955409 29284945 29286353 + 102018902 AGCD01010258 MODEL 8702196 ncrna LOC102004673 uncharacterized LOC102004673 NW_004955406 23278454 23287251 - 102004673 AGCD01006169;GBDK01311017;XR_001230927;XR_259505 MODEL 8873810 protein-coding Ttc39b tetratricopeptide repeat domain 39B INVOLVED IN cholesterol homeostasis (ortholog); negative regulation of cholesterol storage (ortholog); regulation of cholesterol efflux (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atherosclerosis (ortholog); cervical cancer (ortholog) NW_004955434 18063520 18150858 - 102018431 AGCD01032550;AGCD01032551;GBCE01130029;GBCQ01009238;XM_005388704 XP_005388761 MODEL 9008903 pseudo LOC102019330 synphilin-1-like NW_004955441 17320061 17322072 + 102019330 AGCD01037288 MODEL 8751760 ncrna LOC102012718 uncharacterized LOC102012718 NW_004955403 26534439 26537509 + 102012718 AGCD01002308;GBCB01077504;XR_001233580;XR_259205 MODEL 8892476 protein-coding LOC102021499 zinc finger protein 39-like NW_004955581 3067 74785 - 102021499 AGCD01075654;AGCD01075655;AGCD01075656;GBDI01011076;XM_013509735 XP_013365189 MODEL 8768599 protein-coding Slc25a46 solute carrier family 25 member 46 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); cerebellar Purkinje cell differentiation (ortholog); cristae formation (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); Cafe-au-Lait Spots (ortholog); cervical cancer (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955418 4316790 4342748 - 102019172 AGCD01018820;AGCD01018821;GBDJ01348816;XM_005382173;XM_013513025 XP_005382230;XP_013368479 MODEL 8877950 protein-coding Ilvbl ilvB acetolactate synthase like INVOLVED IN fatty acid alpha-oxidation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955495 8130875 8140152 + 102011677 AGCD01062185;GBDI01187952;XM_005406091;XM_005406093;XM_005406094 XP_005406148;XP_005406150;XP_005406151 MODEL 8853606 ncrna LOC102014272 uncharacterized LOC102014272 NW_004955431 13595122 13605665 + 102014272 AGCD01030311;GBCE01113209;XR_001234614;XR_001234615 MODEL 8730781 protein-coding E2f4 E2F transcription factor 4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); blood circulation (ortholog); cell volume homeostasis (ortholog); ASSOCIATED WITH Disease Progression (ortholog); lung cancer (ortholog); Lynch syndrome (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955484 9421396 9427826 - 102010488 AGCD01058415;GBDF01118876;XM_005403677;XM_013503914;XM_013503915 XP_005403734;XP_013359368;XP_013359369 MODEL 8758750 protein-coding LOC102005364 sulfotransferase 1C3 NW_004955470 11921964 11938687 + 102005364 AGCD01052911;AGCD01052912;AGCD01052913;AGCD01052914;GBCQ01008545;GBCQ01008546;XM_013522838 XP_013378292 MODEL 8814534 ncrna LOC102018091 uncharacterized LOC102018091 NW_004955416 30012956 30018288 + 102018091 AGCD01017675;GBDF01066665;XR_260438 MODEL 8899079 protein-coding LOC102009491 olfactory receptor 52N1-like NW_004955414 21756367 21757263 - 102009491 AGCD01015432;XM_013511765 XP_013367219 MODEL 8921813 protein-coding LOC102013091 zinc finger protein 709-like NW_004955420 30017669 30021517 - 102013091 AGCD01021527;AGCD01021528;GBDK01132241;XM_013513351 XP_013368805 MODEL 9042343 pseudo LOC102003606 probable ATP-dependent RNA helicase DDX6 pseudogene NW_004955607 367321 368195 + 102003606 AGCD01076984 MODEL 616940649 snorna snopsi28S-3327 Small nucleolar RNA psi28S-3327 9004575 ncrna LOC102010733 uncharacterized LOC102010733 NW_004955437 20621891 20626279 + 102010733 AGCD01034877;GBCB01027078;XR_261898 MODEL 8848991 protein-coding Slc10a7 solute carrier family 10 member 7 INVOLVED IN bone development (ortholog); heparin proteoglycan biosynthetic process (ortholog); intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) NW_004955428 1999341 2250201 - 102010606 AGCD01027627;AGCD01027628;AGCD01027629;AGCD01027630;AGCD01027631;GBDI01357674;XM_005386663;XM_013515325;XM_013515326 XP_005386720;XP_013370779;XP_013370780 MODEL 9027065 protein-coding Faap20 FA core complex associated protein 20 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); ubiquitin-modified protein reader activity (ortholog); INVOLVED IN DNA damage response (ortholog); interstrand cross-link repair (ortholog); translesion synthesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); Fanconi anaemia nuclear complex (ortholog) NW_004955486 8938352 8944631 + 102026872 AGCD01059157;AGCD01059158;GBDK01196994;XM_013504145 XP_013359599 MODEL 8842502 protein-coding Gmip GEM interacting protein ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN small GTPase-mediated signal transduction (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955524 2380099 2389154 + 102015442 AGCD01068812;AGCD01068813;GBDK01081607;XM_005409642;XM_005409645;XM_013507273;XM_013507274;XM_013507275 XP_005409699;XP_005409702;XP_013362727;XP_013362728;XP_013362729 MODEL 8785852 protein-coding Dnajb1 DnaJ heat shock protein family (Hsp40) member B1 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN cellular response to heat (ortholog); forebrain development (ortholog); negative regulation of inclusion body assembly (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendritic spine (ortholog) NW_004955415 33098503 33102125 - 102017564 AGCD01016751;GBCB01021066;XM_005381107 XP_005381164 MODEL 41410889 protein-coding H4C11 H4 clustered histone 11 39132916 snrna U5 U5 spliceosomal RNA 9031484 protein-coding Ltf lactotransferrin ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); heparin binding (ortholog); iron ion binding (ortholog); INVOLVED IN antibacterial humoral response (ortholog); antibacterial innate immune response (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Anti-Neutrophil Cytoplasmic Antibody-Associated Vasculitis (ortholog); arthropathy (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) NW_004955420 25580449 25604277 + 102026330 AGCD01021367;GBDK01138931;XM_005383443 XP_005383500 MODEL 8938738 protein-coding LOC102008016 scavenger receptor cysteine-rich type 1 protein M130-like NW_004955507 6508836 6526813 - 102008016 AGCD01065720;AGCD01065721;AGCD01065722;GBDI01367183;XM_013506149 XP_013361603 MODEL 8777398 ncrna LOC102004680 uncharacterized LOC102004680 NW_004955461 2769426 3001729 + 102004680 AGCD01048841;AGCD01048842;AGCD01048843;AGCD01048844;AGCD01048845;GBCE01007435;XR_001236575;XR_001236576;XR_001236577;XR_001236578;XR_001236579;XR_001236580;XR_263075 MODEL 8813694 protein-coding Lmntd2 lamin tail domain containing 2 INVOLVED IN positive regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Beckwith-Wiedemann syndrome (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955476 11487918 11493281 + 102018826 AGCD01055460;GBDK01360050;XM_005401846;XM_005401847;XM_005401848;XM_005401849;XM_005401850;XM_005401851;XM_005401852;XM_005401853;XM_005401854;XM_005401855;XM_005401856;XM_005401857;XM_005401858;XM_005401859;XM_013502920;XM_013502921 XP_005401903;XP_005401904;XP_005401905;XP_005401906;XP_005401907;XP_005401908;XP_005401909;XP_005401910;XP_005401911;XP_005401912;XP_005401913;XP_005401914;XP_005401915;XP_005401916;XP_013358374;XP_013358375 MODEL 39133068 snrna U6 U6 spliceosomal RNA 8855012 protein-coding Bri3 brain protein I3 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955460 14165874 14174464 + 102029053 AGCD01048742;GBDF01045177;GBDI01000286;XM_013521167 XP_013376621 MODEL 9021029 protein-coding LOC102025409 general transcription factor IIH subunit 2 NW_004955575 216880 249692 + 102025409 AGCD01075208;AGCD01075209;AGCD01075210;GBDK01276729;XM_005413918;XM_005413919 XP_005413975;XP_005413976 MODEL 39132682 snrna U6 U6 spliceosomal RNA 8759906 protein-coding LOC102019331 olfactory receptor 11H4 NW_004955550 1024441 1025403 + 102019331 AGCD01072541;XM_005412042 XP_005412099 MODEL 8901122 protein-coding Tor2a torsin family 2 member A ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); positive regulation of calcium ion transmembrane transport (ortholog); vasopressin secretion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); extracellular region (ortholog) NW_004955419 922901 926624 + 102029295 AGCD01019623;GBDF01251618;XM_005382421 XP_005382478 MODEL 9053976 protein-coding Thbd thrombomodulin ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN female pregnancy (ortholog); negative regulation of blood coagulation (ortholog); response to cAMP (ortholog); PARTICIPATES IN protein C anticoagulant pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN apicolateral plasma membrane (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) NW_004955415 30222830 30226406 - 102029285 AGCD01016660;GBCC01028598;XM_005380959 XP_005381016 MODEL 8970283 protein-coding LOC102016182 uncharacterized LOC102016182 NW_004955429 14278917 14285980 - 102016182 AGCD01028778;XM_005387011;XM_013515397 XP_005387068;XP_013370851 MODEL 8831190 protein-coding Lcorl ligand dependent nuclear receptor corepressor like ENCODES a protein that exhibits histone methyltransferase binding (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Birth Weight (ortholog); hepatocellular carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog) NW_004955480 6241460 6398022 + 102004706 AGCD01056683;AGCD01056684;GBDF01159377;XM_005402490;XM_005402491;XM_013503311;XM_013503312;XM_013503313;XM_013503314;XM_013503315;XM_013503316;XM_013503317;XM_013503318 XP_005402547;XP_005402548;XP_013358765;XP_013358766;XP_013358767;XP_013358768;XP_013358769;XP_013358770;XP_013358771;XP_013358772 MODEL 8896886 protein-coding Kif5a kinesin family member 5A ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); anterograde dendritic transport of neurotransmitter receptor complex (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); amyotrophic lateral sclerosis type 25 (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); central region of growth cone (ortholog) NW_004955458 5264274 5310962 + 102030391 AGCD01047470;AGCD01047471;AGCD01047472;AGCD01047473;AGCD01047474;GBDF01176835;XM_005397522 XP_005397579 MODEL 8947432 protein-coding Gfer growth factor, augmenter of liver regeneration ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); flavin-dependent sulfhydryl oxidase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN cellular response to actinomycin D (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to toxic substance (ortholog); PARTICIPATES IN intermembrane space assembly pathway of mitochondrial protein import; mitochondrial iron-sulfur cluster export pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN cytosol (ortholog); extracellular region (ortholog); mitochondrion (ortholog) NW_004955442 15280753 15283405 - 102010739 AGCD01037864;GBDI01129394;XM_005391484;XM_005391485 XP_005391541;XP_005391542 MODEL 10145233 ncrna LOC106147376 uncharacterized LOC106147376 NW_004955548 766055 773868 + 106147376 AGCD01072341;GBDK01118113;XR_001232239 MODEL 39132956 snrna U1 U1 spliceosomal RNA 8788569 protein-coding Yif1b Yip1 interacting factor homolog B, membrane trafficking protein INVOLVED IN cilium assembly (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); protein targeting to membrane (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955468 1123924 1133292 + 102017215 AGCD01051757;GBDF01002958;XM_005399857;XM_005399858;XM_005399859;XM_005399860;XM_005399861;XM_005399862;XM_005399864;XM_005399865 XP_005399914;XP_005399915;XP_005399916;XP_005399917;XP_005399918;XP_005399919;XP_005399921;XP_005399922 MODEL 8891365 ncrna LOC102009931 uncharacterized LOC102009931 NW_004955469 1231307 1236093 - 102009931 AGCD01052250;XR_263423 MODEL 8881492 protein-coding Slx4 SLX4 structure-specific endonuclease subunit ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN DNA double-strand break processing involved in repair via single-strand annealing (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); ERCC4-ERCC1 complex (ortholog) NW_004955442 13765660 13792106 + 102020491 AGCD01037787;AGCD01037788;GBCB01011086;XM_005391326;XM_005391327;XM_005391328;XM_005391329;XM_005391330;XM_005391331 XP_005391383;XP_005391384;XP_005391385;XP_005391386;XP_005391387;XP_005391388 MODEL 8904745 protein-coding Tax1bp3 Tax1 binding protein 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of protein localization to cell surface (ortholog); negative regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleus (ortholog) NW_004955467 13146527 13151109 + 102022271 AGCD01051667;GBDF01120348;XM_005399723 XP_005399780 MODEL 9013067 protein-coding Cyth4 cytohesin 4 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955413 23745797 23774397 + 102030173 AGCD01014335;GBCE01075881;XM_005379197 XP_005379254 MODEL 8984107 pseudo LOC102022202 probable N-acetyltransferase CML1 NW_004955424 11918874 11919517 - 102022202 AGCD01024579 MODEL 8872761 protein-coding Slc25a47 solute carrier family 25 member 47 ENCODES a protein that exhibits acetyl-CoA transmembrane transporter activity (ortholog); NAD transmembrane transporter activity (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); prostate cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) NW_004955438 21406270 21413946 + 102005970 AGCD01035542;GBBH01182249;XM_005390431;XM_005390432 XP_005390488;XP_005390489 MODEL 39132844 snrna U6 U6 spliceosomal RNA 8785117 protein-coding LOC102014275 coiled-coil domain-containing protein 160-like NW_004955433 1192697 1195183 - 102014275 AGCD01031350;GBDF01044090;XM_005388185;XM_005388186;XM_013516210 XP_005388242;XP_005388243;XP_013371664 MODEL 8845504 pseudo LOC102005366 acyl-protein thioesterase 1 pseudogene NW_004955414 31575081 31575919 + 102005366 AGCD01015757 MODEL 8809338 protein-coding Lmo1 LIM domain only 1 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of T cell homeostatic proliferation (ortholog); ASSOCIATED WITH neuroblastoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) NW_004955414 24021275 24072098 - 102017224 AGCD01015532;AGCD01015533;GBDI01322766;XM_005380218;XM_005380219;XM_005380220;XM_013511707;XM_013511708 XP_005380275;XP_005380276;XP_005380277;XP_013367161;XP_013367162 MODEL 8823034 protein-coding Rab8b RAB8B, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); signaling receptor binding (ortholog); TPR domain binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cell-substrate junction organization (ortholog); cilium assembly (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); Liver Reperfusion Injury (ortholog); FOUND IN cell tip (ortholog); endosome membrane (ortholog); perinuclear region of cytoplasm (ortholog) NW_004955450 12026784 12095332 - 102028150 AGCD01042686;AGCD01042687;GBDJ01140085;XM_005393793 XP_005393850 MODEL 8855320 pseudo LOC102009492 RNA-binding protein with serine-rich domain 1 pseudogene NW_004955415 3192634 3193526 - 102009492 AGCD01015927 MODEL 8761047 ncrna LOC102003929 uncharacterized LOC102003929 NW_004955758 2514 8463 + 102003929 AGCD01078291;GBCB01086463;XR_001232596;XR_001232597 MODEL 9054797 protein-coding LOC102003607 PRAME family member 12-like NW_004955615 28450 30897 - 102003607 AGCD01077247;XM_005414978 XP_005415035 MODEL 8790255 protein-coding Tor3a torsin family 3 member A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) NW_004955406 18408095 18422098 + 102028377 AGCD01006034;AGCD01006035;GBCB01056537;XM_005374944;XM_013521135 XP_005375001;XP_013376589 MODEL 8942585 protein-coding Slc11a1 solute carrier family 11 member 1 ENCODES a protein that exhibits iron ion transmembrane transporter activity (ortholog); magnesium ion transmembrane transporter activity (ortholog); manganese ion transmembrane transporter activity (ortholog); INVOLVED IN antigen processing and presentation of peptide antigen (ortholog); cadmium ion transmembrane transport (ortholog); cellular detoxification of cadmium ion (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); endosome membrane (ortholog); late endosome (ortholog) NW_004955453 14980562 14995118 - 102011273 AGCD01044879;AGCD01044880;GBDF01008960;XM_005395650;XM_005395651;XM_013519872;XM_013519873;XM_013519874;XM_013519875;XM_013519876 XP_005395707;XP_005395708;XP_013375326;XP_013375327;XP_013375328;XP_013375329;XP_013375330 MODEL 8742374 protein-coding LOC102020374 atherin-like NW_004955437 223848 227296 + 102020374 AGCD01034111;GBDF01262028;XM_005389354;XM_005389355;XR_001235058 XP_005389411;XP_005389412 MODEL 10382543 ncrna LOC106147377 uncharacterized LOC106147377 NW_004955548 852747 908256 - 106147377 AGCD01072344;AGCD01072345;AGCD01072346;GBDJ01342031;XR_001232249 MODEL 39133069 snrna U6 U6 spliceosomal RNA 8822821 ncrna LOC102021500 uncharacterized LOC102021500 NW_004955449 3631986 3636241 + 102021500 AGCD01041858;GBDF01211884;XR_262486 MODEL 8978363 protein-coding Sbds SBDS ribosome maturation factor ENCODES a protein that exhibits microtubule binding (ortholog); ribosome binding (ortholog); rRNA binding (ortholog); INVOLVED IN bone marrow development (ortholog); bone mineralization (ortholog); cytosolic ribosome assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); Anodontia of Permanent Dentition (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) NW_004955456 8773917 8782427 - 102010127 AGCD01046502;GBDF01186593;XM_005396725;XM_013520572 XP_005396782;XP_013376026 MODEL 9053423 protein-coding LOC102008017 olfactory receptor 5M3-like NW_004955511 1648423 1649355 - 102008017 AGCD01066377;XM_005407969 XP_005408026 MODEL 8994832 protein-coding Ltk leukocyte receptor tyrosine kinase ENCODES a protein that exhibits protein kinase activity (ortholog); protein tyrosine kinase activity (ortholog); receptor signaling protein tyrosine kinase activator activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to retinoic acid (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) NW_004955416 8310304 8319463 - 102006127 AGCD01017041;AGCD01017042;AGCD01017043;GBDK01181083;XM_013512414 XP_013367868 MODEL 8783819 protein-coding Flrt1 fibronectin leucine rich transmembrane protein 1 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); INVOLVED IN dendrite development (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); neuron projection extension (ortholog); FOUND IN anchoring junction (ortholog); cell-cell junction (ortholog); cytoplasmic vesicle (ortholog) NW_004955422 20944875 20958618 - 102022396 AGCD01023098;GBBH01221857;XM_005384646;XM_005384647;XM_005384648 XP_005384703;XP_005384704;XP_005384705 MODEL 8813963 protein-coding Immp1l inner mitochondrial membrane peptidase subunit 1 PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955476 9784838 9850076 - 102025906 AGCD01055397;AGCD01055398;AGCD01055399;AGCD01055400;GBCQ01044833;XM_005401775;XM_005401776;XM_005401778;XM_005401779;XM_005401780;XM_013502937 XP_005401832;XP_005401833;XP_005401835;XP_005401836;XP_005401837;XP_013358391 MODEL 8741204 protein-coding Synpr synaptoporin INVOLVED IN modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH uterine carcinosarcoma (ortholog); FOUND IN hippocampal mossy fiber to CA3 synapse (ortholog); synaptic vesicle membrane (ortholog) NW_004955517 2261080 2442271 - 102024268 AGCD01067623;AGCD01067624;AGCD01067625;AGCD01067626;AGCD01067627;AGCD01067628;AGCD01067629;AGCD01067630;GBBH01030467;XM_005409042 XP_005409099 MODEL 9021599 protein-coding Bri3bp BRI3 binding protein ASSOCIATED WITH colon adenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); urinary bladder cancer (ortholog); FOUND IN mitochondrion (ortholog) NW_004955482 4710937 4716534 - 102026528 AGCD01057306;GBCQ01176014;GBDF01123268;XM_013503743 XP_013359197 MODEL 8801404 pseudo LOC102018903 ribonucleoside-diphosphate reductase subunit M2 pseudogene NW_004955460 9878566 9879060 - 102018903 AGCD01048558 MODEL 8999128 pseudo LOC102025410 nucleoporin p54-like NW_004955447 17601112 17610634 - 102025410 AGCD01041131;AGCD01041132 MODEL 39132109 snrna U6 U6 spliceosomal RNA 8944768 ncrna LOC102019332 uncharacterized LOC102019332 NW_004955442 5088498 5127744 + 102019332 AGCD01037552;GBDF01212046;XR_262114 MODEL 8706589 pseudo LOC102013096 probable E3 ubiquitin-protein ligase HECTD2 NW_004955493 1068126 1073096 + 102013096 AGCD01060877 MODEL 39132846 snrna U6 U6 spliceosomal RNA 730469421 snorna snoR1 Small nucleolar RNA snoR1 8950746 pseudo LOC102010742 pre-mRNA-splicing factor RBM22 pseudogene NW_004955444 6844758 6848013 + 102010742 AGCD01038875 MODEL 9057802 protein-coding Ttc39c tetratricopeptide repeat domain 39C ASSOCIATED WITH Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); esophageal cancer (ortholog) NW_004955402 12408853 12503273 + 102007385 AGCD01000390;AGCD01000391;GBDI01295181;GBDJ01387468;XM_005372710 XP_005372767 MODEL 39131404 protein-coding SDC1 syndecan 1 8830903 protein-coding LOC102023264 translation initiation factor IF-2-like NW_004955418 18628035 18757375 + 102023264 AGCD01019177;AGCD01019178;AGCD01019179;AGCD01019180;AGCD01019181;AGCD01019182;GBBH01069334;XM_013512952;XR_001233506;XR_001233507;XR_001233508;XR_260566;XR_260568 XP_013368406 MODEL 8924774 protein-coding Faap24 FA core complex associated protein 24 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN interstrand cross-link repair (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); melanoma (ortholog); FOUND IN chromatin (ortholog); FANCM-MHF complex (ortholog); Fanconi anaemia nuclear complex (ortholog) NW_004955468 4977024 4980543 - 102026737 AGCD01051930;GBDF01193379;XM_005400075;XM_005400076;XM_005400077 XP_005400132;XP_005400133;XP_005400134 MODEL 39132920 snrna U5 U5 spliceosomal RNA 8735442 protein-coding Dnajb11 DnaJ heat shock protein family (Hsp40) member B11 ENCODES a protein that exhibits misfolded protein binding (ortholog); protein folding chaperone (ortholog); signaling receptor binding (ortholog); INVOLVED IN mRNA modification (ortholog); negative regulation of neurogenesis (ortholog); protein maturation (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant polycystic kidney disease (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog) NW_004955420 21097292 21113053 - 102028760 AGCD01021123;AGCD01021124;AGCD01021125;GBCC01049191;GBDI01118251;XM_013513338 XP_013368792 MODEL 9033471 protein-coding Slx4ip SLX4 interacting protein ASSOCIATED WITH developmental and epileptic encephalopathy 12 (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955415 20316664 20478786 + 102025455 AGCD01016487;AGCD01016488;AGCD01016489;GBDF01188952;XM_005380876;XM_005380877;XM_013512259;XM_013512260 XP_005380933;XP_005380934;XP_013367713;XP_013367714 MODEL 39132683 snrna U6 U6 spliceosomal RNA 9017557 protein-coding Nt5c1b 5'-nucleotidase, cytosolic IB ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); INVOLVED IN adenosine metabolic process (ortholog); AMP catabolic process (ortholog); nucleoside metabolic process (ortholog); FOUND IN cytosol (ortholog) NW_004955469 1287455 1300716 - 102008397 AGCD01052251;GBCB01120181;XM_005400331;XM_005400334 XP_005400388;XP_005400391 MODEL 9064416 protein-coding Slc12a1 solute carrier family 12 member 1 ENCODES a protein that exhibits protein serine/threonine kinase binding (ortholog); sodium:potassium:chloride symporter activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); cellular hyperosmotic salinity response (ortholog); chloride transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH Alkalosis (ortholog); Bartter disease (ortholog); Bartter disease type 1 (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); extracellular exosome (ortholog) NW_004955409 5597033 5680009 - 102011509 AGCD01009320;AGCD01009321;GBCQ01007582;XM_005376699;XM_005376700;XM_005376701;XM_005376702 XP_005376756;XP_005376757;XP_005376758;XP_005376759 MODEL 8779562 protein-coding Ltn1 listerin E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); rescue of stalled cytosolic ribosome (ortholog); ribosome-associated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colorectal cancer (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); RQC complex (ortholog) NW_004955407 28303598 28352797 - 102024426 AGCD01007581;GBDJ01279822;XM_005375608 XP_005375665 MODEL 8920420 ncrna LOC102012719 uncharacterized LOC102012719 NW_004955403 40191140 40192388 - 102012719 AGCD01002668;AGCD01002669;GBDF01211863;XR_259232 MODEL 9043789 pseudo LOC102009499 60S ribosomal protein L17 pseudogene NW_004955417 3418704 3419219 - 102009499 AGCD01017914 MODEL 8834028 protein-coding Gfi1 growth factor independent 1 transcriptional repressor ENCODES a protein that exhibits DNA-binding transcription repressor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); enzyme-substrate adaptor activity (ortholog); INVOLVED IN cell fate commitment (ortholog); cellular response to lipopolysaccharide (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN nuclear body (ortholog); nuclear matrix (ortholog); nucleus (ortholog) NW_004955423 2024084 2032530 + 102020580 AGCD01023463;AGCD01023464;GBDJ01320845;XM_013514361 XP_013369815 MODEL 39132957 snrna U1 U1 spliceosomal RNA 8708813 protein-coding Gml glycosylphosphatidylinositol anchored molecule like NW_004955454 1724929 1735380 + 102025079 AGCD01044979;AGCD01044980;AGCD01044981;GBDF01052200;XM_005395752 XP_005395809 MODEL 8975418 ncrna LOC102009935 uncharacterized LOC102009935 NW_004955471 831025 838931 - 102009935 AGCD01052965;GBDF01265719;XR_263511 MODEL 8925478 protein-coding Yipf1 Yip1 domain family member 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi medial cisterna (ortholog); Golgi trans cisterna (ortholog) NW_004955464 5369690 5408470 + 102009700 AGCD01050006;GBDF01051315;XM_005398553;XM_005398554;XM_005398555 XP_005398610;XP_005398611;XP_005398612 MODEL 8807045 protein-coding Tead3 TEA domain transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN asymmetric neuroblast division (ortholog); hippo signaling (ortholog); positive regulation of stem cell population maintenance (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN transcription regulator complex (ortholog) NW_004955437 3387812 3405232 - 102027454 AGCD01034310;AGCD01034311;GBDK01091589;XM_005389558;XM_005389559;XM_013516911;XM_013516912;XM_013516913;XM_013516914;XM_013516915;XR_001235067 XP_005389615;XP_005389616;XP_013372365;XP_013372366;XP_013372367;XP_013372368;XP_013372369 MODEL 8920227 protein-coding E2f5 E2F transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955417 3131282 3155872 + 102003545 AGCD01017904;AGCD01017905;GBCE01129791;XM_005381740 XP_005381797 MODEL 8711762 protein-coding Ttc4 tetratricopeptide repeat domain 4 INVOLVED IN defense response to virus (ortholog); innate immune response (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament cytoskeleton (ortholog); nucleus (ortholog) NW_004955464 4629061 4669054 - 102027156 AGCD01049992;GBDF01123002;XM_005398518;XM_005398519;XR_001236700 XP_005398575;XP_005398576 MODEL 9022679 protein-coding LOC102003608 RNA-binding protein 45 NW_004955403 18755127 18773060 - 102003608 AGCD01002110;AGCD01002111;AGCD01002112;GBCQ01097237;GBDJ01233290;XM_005373393;XM_005373395 XP_005373450;XP_005373452 MODEL 9030148 ncrna LOC102020378 uncharacterized LOC102020378 NW_004955538 189557 202222 + 102020378 AGCD01070991;AGCD01070992;AGCD01070993;GBBH01198262;XR_001232102;XR_264784;XR_264785;XR_264786;XR_264787 MODEL 8924114 protein-coding LOC102018096 serine/threonine-protein phosphatase 6 regulatory subunit 1 NW_004955483 7973276 8000527 + 102018096 AGCD01057823;GBDI01008367;GBDI01008376;XM_005403389;XM_005403390;XM_013503822;XM_013503823 XP_005403446;XP_005403447;XP_013359276;XP_013359277 MODEL 39131483 protein-coding THBD thrombomodulin 8728454 protein-coding Cytip cytohesin 1 interacting protein INVOLVED IN regulation of cell adhesion (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955449 15948739 15978641 + 102016766 AGCD01042204;GBDK01239047;XM_005393410;XM_013518801 XP_005393467;XP_013374255 MODEL 8762009 pseudo LOC102005367 complement component 1 Q subcomponent-binding protein, mitochondrial pseudogene NW_004955414 29861056 29862411 - 102005367 AGCD01015717 MODEL 8841639 pseudo LOC102021503 synaptobrevin homolog YKT6 pseudogene NW_004955402 16757606 16758112 - 102021503 AGCD01000488 MODEL 8857611 pseudo LOC102014276 mortality factor 4-like protein 1 pseudogene NW_004955433 8231311 8233189 + 102014276 AGCD01031587 MODEL 40834587 protein-coding LCORL ligand dependent nuclear receptor corepressor like 8815472 protein-coding Sbf1 SET binding factor 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatase activity (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog) NW_004955413 33427283 33450581 - 102028950 AGCD01014669;GBCE01096125;GBDF01046406;XM_013511400;XM_013511401;XM_013511402 XP_013366854;XP_013366855;XP_013366856 MODEL 8991079 protein-coding Lmo2 LIM domain only 2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN embryonic hemopoiesis (ortholog); negative regulation of erythrocyte differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); COVID-19 (ortholog); esophageal cancer (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog); transcription regulator complex (ortholog) NW_004955422 12354865 12362026 + 102019401 AGCD01022791;GBBH01063389;GBDF01194295;XM_005384152 XP_005384209 MODEL 8923785 protein-coding Kif5b kinesin family member 5B ENCODES a protein that exhibits identical protein binding (ortholog); JUN kinase binding (ortholog); microtubule binding (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); cellular response to type II interferon (ortholog); centrosome localization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; mitochondria transport pathway; N-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Airway Obstruction (ortholog); anodontia (ortholog); FOUND IN axonal growth cone (ortholog); ciliary rootlet (ortholog); cytolytic granule membrane (ortholog) NW_004955429 23632246 23678797 - 102003570 AGCD01029075;AGCD01029076;AGCD01029077;AGCD01029078;GBBH01116411;GBDF01157819;XM_005387221 XP_005387278 MODEL 8955044 protein-coding Bricd5 BRICHOS domain containing 5 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955442 15054116 15056506 + 102028586 AGCD01037856;GBDF01024331;XM_005391445;XM_005391446;XM_013517734;XM_013517735 XP_005391502;XP_005391503;XP_013373188;XP_013373189 MODEL 9012778 protein-coding Synrg synergin gamma ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN clathrin coat of trans-Golgi network vesicle (ortholog); cytoplasm (ortholog) NW_004955451 439205 510675 + 102020866 AGCD01042936;GBDF01004942;GBDF01016714;XM_005393912;XM_005393914;XM_005393915;XM_005393917;XM_005393919;XM_005393920;XM_005393921;XM_005393922;XM_013519166;XM_013519167;XM_013519168 XP_005393969;XP_005393971;XP_005393972;XP_005393974;XP_005393976;XP_005393977;XP_005393978;XP_005393979;XP_013374620;XP_013374621;XP_013374622 MODEL 8924258 protein-coding Rab9a RAB9A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN positive regulation of exocytosis (ortholog); receptor-mediated endocytosis (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); late endosome (ortholog); lysosome (ortholog) NW_004955519 4489159 4496089 - 102026144 AGCD01067983;GBBH01090631;XM_005409203;XM_005409204;XM_005409206;XM_013506993;XR_001231857 XP_005409260;XP_005409261;XP_005409263;XP_013362447 MODEL 8785571 pseudo LOC102004682 U1 small nuclear ribonucleoprotein C pseudogene NW_004955411 31410189 31410670 - 102004682 AGCD01012272 MODEL 626189202 snorna snoR38 Small nucleolar RNA R38 8976686 protein-coding LOC102003930 BPI fold-containing family C protein-like NW_004957031 166 1202 - 102003930 AGCD01080427;XM_005415220 XP_005415277 MODEL 10314245 protein-coding H6pd hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase ENCODES a protein that exhibits 6-phosphogluconolactonase activity (ortholog); carbohydrate binding (ortholog); glucose 1-dehydrogenase (NAD+) activity (ortholog); INVOLVED IN NADP+ metabolic process (ortholog); pentose-phosphate shunt (ortholog); pentose-phosphate shunt, oxidative branch (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); sarcoplasmic reticulum (ortholog) NW_004955486 4088354 4115077 - 106146236 AGCD01059053;GBBH01115424;GBCB01024181;XM_005404035 XP_005404092 MODEL 8967985 protein-coding Tor4a torsin family 4 member A ASSOCIATED WITH developmental and epileptic encephalopathy 14 (ortholog); Experimental Liver Cirrhosis (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955513 5263299 5265622 + 102003049 AGCD01066964;AGCD01066965;GBBH01207327;GBDI01262912;XM_013506740 XP_013362194 MODEL 39133070 snrna U6 U6 spliceosomal RNA 10332456 ncrna LOC106147378 uncharacterized LOC106147378 NW_004955548 249436 279260 + 106147378 AGCD01072326;AGCD01072327;AGCD01072328;AGCD01072329;GBDF01221437;XR_001232251 MODEL 8943650 protein-coding LOC102008019 olfactory receptor 10AG1-like NW_004955511 736042 745089 + 102008019 AGCD01066342;XM_005408210 XP_005408267 MODEL 8931952 protein-coding Slc25a48 solute carrier family 25 member 48 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955408 30775521 30940335 + 102010675 AGCD01008815;AGCD01008816;AGCD01008817;AGCD01008818;GBDF01214459;XM_005376479;XM_005376480;XM_005376481;XM_005376482;XM_005376483;XM_005376484;XM_013506729;XM_013506744 XP_005376536;XP_005376537;XP_005376538;XP_005376539;XP_005376540;XP_005376541;XP_013362183;XP_013362198 MODEL 9057787 protein-coding Fabp12 fatty acid binding protein 12 ASSOCIATED WITH hepatocellular carcinoma (ortholog) NW_004955444 90140 98048 + 102006964 AGCD01038649;AGCD01038650;GBDF01088978;XM_005392051;XM_005392052;XM_005392053 XP_005392108;XP_005392109;XP_005392110 MODEL 8815866 protein-coding LOC102016183 annexin A8 NW_004955510 6272225 6286726 - 102016183 AGCD01066304;GBCE01001287;XM_005407920 XP_005407977 MODEL 8822405 protein-coding E2f6 E2F transcription factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955487 6014476 6029090 - 102006035 AGCD01059351;AGCD01059352;GBCB01002827;XM_005404425 XP_005404482 MODEL 8824520 pseudo LOC102003610 DCN1-like protein 1 pseudogene NW_004955757 39 601 + 102003610 AGCD01078282 MODEL 8924525 pseudo LOC102010743 olfactory receptor 7G1-like NW_004955563 294341 295318 - 102010743 AGCD01074059 MODEL 8979274 protein-coding LOC102013097 zinc finger protein 782 NW_004955422 23787215 23873788 - 102013097 AGCD01023206;AGCD01023207;AGCD01023208;AGCD01023209;AGCD01023210;GBBH01218955;XM_005384706;XM_013513992;XM_013513993;XM_013513994;XM_013513995;XM_013513996;XM_013513997;XM_013513998;XM_013513999;XM_013514000;XM_013514001;XM_013514002 XP_005384763;XP_013369446;XP_013369447;XP_013369448;XP_013369449;XP_013369450;XP_013369451;XP_013369452;XP_013369453;XP_013369454;XP_013369455;XP_013369456 MODEL 9024050 protein-coding Tbata thymus, brain and testes associated ASSOCIATED WITH Hirschsprung's disease (ortholog); sarcoma (ortholog); thymoma (ortholog); FOUND IN ciliary basal body (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955437 20569644 20586405 + 102009759 AGCD01034877;GBBH01187342;XM_005390044;XM_005390045;XM_005390046;XM_005390047;XM_013517111;XM_013517112 XP_005390101;XP_005390102;XP_005390103;XP_005390104;XP_013372565;XP_013372566 MODEL 8948157 protein-coding Sdc1 syndecan 1 ENCODES a protein that exhibits cargo receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); myoblast development (ortholog); positive regulation of exosomal secretion (ortholog); PARTICIPATES IN altered melanocortin system pathway; melanocortin system pathway; obesity pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); COVID-19 (ortholog); familial hyperlipidemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955469 2762696 2773697 - 102012750 AGCD01052281;GBDI01076441;XM_013522561 XP_013378015 MODEL 8945134 pseudo LOC102012720 translationally-controlled tumor protein pseudogene NW_004955403 40178459 40178980 - 102012720 AGCD01002666 MODEL 39132923 snrna U5 U5 spliceosomal RNA 39132958 snrna U1 U1 spliceosomal RNA 8907712 protein-coding Gmnc geminin coiled-coil domain containing ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); DNA replication (ortholog) NW_004955420 17286789 17297574 + 102014363 AGCD01021021;GBBH01168023;XM_005383221 XP_005383278 MODEL 8896720 protein-coding LOC102022204 transmembrane protein 45A-like NW_004955427 2117389 2212016 + 102022204 AGCD01026892;AGCD01026893;AGCD01026894;GBCE01065125;XM_005386298;XM_005386299;XM_005386300;XM_005386301;XM_013515224;XM_013515225 XP_005386355;XP_005386356;XP_005386357;XP_005386358;XP_013370678;XP_013370679 MODEL 39132684 snrna U6 U6 spliceosomal RNA 8730256 protein-coding Yipf2 Yip1 domain family member 2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN Golgi medial cisterna (ortholog); Golgi trans cisterna (ortholog); late endosome membrane (ortholog) NW_004955495 2001458 2005880 - 102015214 AGCD01061744;GBCB01059650;XM_005405636;XM_013505171;XM_013505172;XM_013505173 XP_005405693;XP_013360625;XP_013360626;XP_013360627 MODEL 8711559 ncrna LOC102018904 uncharacterized LOC102018904 NW_004955411 12608628 12618065 + 102018904 AGCD01011851;GBDF01241604;XR_259934 MODEL 8746294 protein-coding Slx9 SLX9 ribosome biogenesis factor ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleolus (ortholog) NW_004955407 41812808 41834661 + 102011404 AGCD01007882;AGCD01007883;GBBH01119448;XM_005375907 XP_005375964 MODEL 39132961 snrna U1 U1 spliceosomal RNA 9019626 ncrna LOC102025413 uncharacterized LOC102025413 NW_004955402 2688645 2701921 - 102025413 AGCD01000087;AGCD01000088;GBDI01267893;XR_001234588 MODEL 8817936 protein-coding Nt5c2 5'-nucleotidase, cytosolic II ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); ATP binding (ortholog); identical protein binding (ortholog); INVOLVED IN adenosine metabolic process (ortholog); allantoin metabolic process (ortholog); dGMP catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) NW_004955485 7318006 7394448 + 102007437 AGCD01058653;AGCD01058654;GBDF01044600;XM_005403812;XM_013504079 XP_005403869;XP_013359533 MODEL 39132847 snrna U6 U6 spliceosomal RNA 9020884 pseudo LOC102018098 dnaJ homolog subfamily A member 1 pseudogene NW_004955420 13182480 13183950 + 102018098 AGCD01020916 MODEL 8940744 protein-coding Thbs1 thrombospondin 1 ENCODES a protein that exhibits collagen V binding (ortholog); endopeptidase inhibitor activity (ortholog); extracellular matrix binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); blood coagulation, fibrin clot formation (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) NW_004955416 6490034 6506419 + 102010897 AGCD01016946;GBBH01143942;XM_013512591 XP_013368045 MODEL 8819718 protein-coding LOC102019333 28S ribosomal protein S18c, mitochondrial NW_004955552 805450 806106 - 102019333 AGCD01072740;XM_005412189 XP_005412246 MODEL 8785400 protein-coding Lto1 LTO1 maturation factor of ABCE1 INVOLVED IN protein maturation (ortholog); ribosomal large subunit biogenesis (ortholog); translational initiation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955422 16433589 16440506 + 102024124 AGCD01022898;GBDF01157369;XM_005384249;XM_005384250;XM_013514212 XP_005384306;XP_005384307;XP_013369666 MODEL 9040254 protein-coding LOC102009503 olfactory receptor 2V2 NW_004955483 151790 152737 + 102009503 AGCD01057601;XM_005403270 XP_005403327 MODEL 8795800 protein-coding Sbf2 SET binding factor 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); phosphatase binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); endosome membrane (ortholog); membrane (ortholog) NW_004955414 25463962 25845368 - 102020439 AGCD01015607;AGCD01015608;AGCD01015609;AGCD01015610;AGCD01015611;AGCD01015612;AGCD01015613;AGCD01015614;AGCD01015615;AGCD01015616;AGCD01015617;AGCD01015618;AGCD01015619;AGCD01015620;AGCD01015621;AGCD01015622;AGCD01015623;AGCD01015624;AGCD01015625;GBDF01128046;XM_013511938 XP_013367392 MODEL 8836594 protein-coding Rab9b RAB9B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); identical protein binding (ortholog); INVOLVED IN receptor-mediated endocytosis (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN phagocytic vesicle (ortholog) NW_004955548 825208 829815 - 102028901 AGCD01072344;GBCQ01164674;XM_005411999 XP_005412056 MODEL 8794498 protein-coding Brinp1 BMP/retinoic acid inducible neural specific 1 INVOLVED IN behavioral fear response (ortholog); brain development (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) NW_004955419 8529213 8704113 + 102029398 AGCD01019899;AGCD01019900;GBBH01200609;XM_005382605 XP_005382662 MODEL 8908823 protein-coding LOC102004683 uncharacterized LOC102004683 NW_004955464 12780991 12785037 + 102004683 AGCD01050228;GBDF01008922;XM_013521579 XP_013377033 MODEL 8776301 pseudo LOC102009936 probable RNA-binding protein 46 pseudogene NW_004955414 12245219 12246350 - 102009936 AGCD01015095 MODEL 8823685 protein-coding Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); INVOLVED IN cellular response to misfolded protein (ortholog); ERAD pathway (ortholog); protein folding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog) NW_004955437 19266206 19285654 + 102028576 AGCD01034841;GBDF01157510;XM_005390011;XM_005390012;XM_005390014 XP_005390068;XP_005390069;XP_005390071 MODEL 8867776 protein-coding Flrt2 fibronectin leucine rich transmembrane protein 2 ENCODES a protein that exhibits chemorepellent activity (ortholog); fibroblast growth factor receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); basement membrane organization (ortholog); cell adhesion involved in heart morphogenesis (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uveal melanoma (ortholog); FOUND IN cell-cell junction (ortholog); extracellular region (ortholog); focal adhesion (ortholog) NW_004955438 8565319 8656195 + 102029008 AGCD01035161;AGCD01035162;GBCE01053936;XM_005390242;XM_005390243;XM_005390244;XM_005390246;XM_013517210;XM_013517211;XM_013517212;XM_013517213 XP_005390299;XP_005390300;XP_005390301;XP_005390303;XP_013372664;XP_013372665;XP_013372666;XP_013372667 MODEL 39133071 snrna U6 U6 spliceosomal RNA 8915054 protein-coding Ttc5 tetratricopeptide repeat domain 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); ribosome binding (ortholog); INVOLVED IN cellular response to starvation (ortholog); DNA damage response (ortholog); positive regulation of mRNA catabolic process (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) NW_004955550 1073697 1105055 - 102019646 AGCD01072547;AGCD01072548;AGCD01072549;GBDK01143150;XM_005412043;XM_013508557;XM_013508558;XM_013508559;XM_013508560 XP_005412100;XP_013364011;XP_013364012;XP_013364013;XP_013364014 MODEL 39132110 snrna U6 U6 spliceosomal RNA 9018140 protein-coding LOC102016184 vomeronasal type-1 receptor 90-like NW_004955429 12240723 12241640 - 102016184 AGCD01028708;XM_005387242 XP_005387299 MODEL 8806078 protein-coding Slc12a2 solute carrier family 12 member 2 ENCODES a protein that exhibits ammonium channel activity (ortholog); chloride:monoatomic cation symporter activity (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); branching involved in mammary gland duct morphogenesis (ortholog); cell volume homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alacrima (ortholog); anemia (ortholog); FOUND IN apical plasma membrane (ortholog); astrocyte projection (ortholog); basal plasma membrane (ortholog) NW_004955415 1138297 1219241 + 102023689 AGCD01015863;GBCE01002817;GBCE01002818;XM_005381114 XP_005381171 MODEL 9051859 protein-coding Gmnn geminin DNA replication inhibitor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); negative regulation of cell cycle (ortholog); negative regulation of DNA replication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955483 2283518 2344982 - 102008223 AGCD01057673;AGCD01057674;GBDJ01215683;XM_005403359;XM_005403360;XM_005403361;XM_005403362;XM_005403363;XM_013503810 XP_005403416;XP_005403417;XP_005403418;XP_005403419;XP_005403420;XP_013359264 MODEL 8735282 protein-coding LOC102021507 zinc finger protein 883-like NW_004955624 87138 106468 - 102021507 AGCD01077434;AGCD01077435;AGCD01077436;XM_013510159 XP_013365613 MODEL 8892287 protein-coding Lcp1 lymphocyte cytosolic protein 1 ENCODES a protein that exhibits actin filament binding (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); animal organ regeneration (ortholog); cell migration (ortholog); ASSOCIATED WITH Acute Otitis Media; acute myeloid leukemia (ortholog); breast cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); actin filament bundle (ortholog) NW_004955518 3815181 3863440 - 102019425 AGCD01067810;AGCD01067811;GBCE01054671;XM_005409099 XP_005409156 MODEL 8902833 protein-coding Lmo3 LIM domain only 3 INVOLVED IN exploration behavior (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of fat cell differentiation (ortholog); FOUND IN cytoplasm (ortholog) NW_004955413 13183294 13238875 - 102007980 AGCD01014009;AGCD01014010;GBDI01299626;XM_005379027;XM_005379028;XM_005379029;XM_005379030;XM_005379031;XM_005379032;XM_005379033;XM_005379034;XM_013511273;XM_013511274 XP_005379084;XP_005379085;XP_005379086;XP_005379087;XP_005379088;XP_005379089;XP_005379090;XP_005379091;XP_013366727;XP_013366728 MODEL 8815923 protein-coding Kif5c kinesin family member 5C ENCODES a protein that exhibits apolipoprotein receptor binding (ortholog); ATP hydrolysis activity (ortholog); microtubule binding (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); anterograde dendritic transport of messenger ribonucleoprotein complex (ortholog); intracellular mRNA localization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease 3 (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN axonal growth cone (ortholog); ciliary rootlet (ortholog); cytoplasm (ortholog) NW_004955440 14754931 14854090 + 102017707 AGCD01036479;AGCD01036480;GBDF01250404;XM_013517505 XP_013372959 MODEL 8973175 protein-coding E2f7 E2F transcription factor 7 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity (ortholog); INVOLVED IN chorionic trophoblast cell differentiation (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); hepatocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) NW_004955405 16148640 16187272 - 102015172 AGCD01004963;GBDF01076465;XM_005374349;XM_005374351;XM_013517776 XP_005374406;XP_005374408;XP_013373230 MODEL 8910300 protein-coding Gfi1b growth factor independent 1B transcriptional repressor ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of granulocyte differentiation (ortholog); regulation of erythrocyte differentiation (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); FOUND IN nuclear matrix (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955513 2273267 2281850 + 102004627 AGCD01066872;GBBH01144928;XM_005408400;XM_005408401 XP_005408457;XP_005408458 MODEL 8842154 pseudo LOC102003933 pannexin-1 pseudogene NW_004955451 1471730 1473218 + 102003933 AGCD01042971 MODEL 8782861 protein-coding Immp2l inner mitochondrial membrane peptidase subunit 2 ENCODES a protein that exhibits peptidase activity (ortholog); signal peptidase activity (ortholog); INVOLVED IN blood circulation (ortholog); brain development (ortholog); cerebellum vasculature development (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH autistic disorder (ortholog); diffuse large B-cell lymphoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane peptidase complex (ortholog); mitochondrion (ortholog) NW_004955410 14567787 15420025 - 102014333 AGCD01010910;AGCD01010911;AGCD01010912;AGCD01010913;AGCD01010914;AGCD01010915;AGCD01010916;AGCD01010917;AGCD01010918;AGCD01010919;AGCD01010920;AGCD01010921;AGCD01010922;AGCD01010923;AGCD01010924;AGCD01010925;AGCD01010926;GBCQ01071840;XM_005377314 XP_005377371 MODEL 8725027 protein-coding Tead4 TEA domain transcription factor 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN blastocyst formation (ortholog); cell fate commitment (ortholog); cell fate specification (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955429 18497223 18552504 + 102025932 AGCD01028915;GBCB01007409;XM_005387130;XM_013515542;XM_013515543;XM_013515544;XM_013515545;XM_013515546;XM_013515547 XP_005387187;XP_013370996;XP_013370997;XP_013370998;XP_013370999;XP_013371000;XP_013371001 MODEL 8875362 protein-coding Tox thymocyte selection associated high mobility group box ENCODES a protein that exhibits chromatin DNA binding (ortholog); INVOLVED IN CD4-positive, alpha-beta T cell lineage commitment (ortholog); CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment (ortholog); CD8-positive, alpha-beta T cell lineage commitment (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955444 19453789 19796419 + 102004528 AGCD01039281;AGCD01039282;AGCD01039283;AGCD01039284;AGCD01039285;AGCD01039286;AGCD01039287;AGCD01039288;AGCD01039289;AGCD01039290;GBDI01356789;XM_005392187;XM_005392188;XM_005392189;XM_005392190;XM_013518215 XP_005392244;XP_005392245;XP_005392246;XP_005392247;XP_013373669 MODEL 10252608 protein-coding LOC106147380 olfactory receptor 11H6 NW_004955550 977805 978797 + 106147380 AGCD01072535;XM_013508550 XP_013364004 MODEL 8816942 protein-coding Haao 3-hydroxyanthranilate 3,4-dioxygenase ENCODES a protein that exhibits 3-hydroxyanthranilate 3,4-dioxygenase activity (ortholog); ferrous iron binding (ortholog); iron ion binding (ortholog); INVOLVED IN L-tryptophan catabolic process (ortholog); NAD+ biosynthetic process (ortholog); neuron cellular homeostasis (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH atherosclerosis (ortholog); atrial heart septal defect (ortholog); Developmental Disabilities (ortholog); FOUND IN cytosol (ortholog); mitochondrial membrane (ortholog) NW_004955441 10114863 10128948 - 102023638 AGCD01037071;GBDJ01125434;XM_005390921;XM_013517593 XP_005390978;XP_013373047 MODEL 8949829 protein-coding Kif6 kinesin family member 6 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); aortic dissection (ortholog); FOUND IN male germ cell nucleus (ortholog) NW_004955437 6353318 6597196 - 102029118 AGCD01034435;AGCD01034436;AGCD01034437;AGCD01034438;AGCD01034439;AGCD01034440;AGCD01034441;GBCE01165390;GBDI01357272;XM_013517003;XM_013517004;XM_013517005 XP_013372457;XP_013372458;XP_013372459 MODEL 9014578 protein-coding LOC102005368 translation initiation factor IF-2-like NW_004955472 12291264 12293311 + 102005368 AGCD01053791;AGCD01053792;GBBH01193885;GBDJ01318455;XM_013523032 XP_013378486 MODEL 8815120 ncrna LOC102014277 uncharacterized LOC102014277 NW_004955433 14106863 14109014 - 102014277 AGCD01031706;GBDF01146409;XR_261591 MODEL 8740717 protein-coding Cytl1 cytokine like 1 ASSOCIATED WITH melanoma (ortholog) NW_004955514 4826792 4831424 + 102024943 AGCD01067141;GBCB01053473;XM_005408829 XP_005408886 MODEL 8809166 protein-coding Slc25a5 solute carrier family 25 member 5 ENCODES a protein that exhibits adenine nucleotide transmembrane transporter activity (ortholog); ATP:ADP antiporter activity (ortholog); oxidative phosphorylation uncoupler activity (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); adenine nucleotide transport (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN membrane (ortholog); membrane raft (ortholog); mitochondrial inner membrane (ortholog) NW_004955534 497518 500309 - 102012240 AGCD01070456;GBBH01091214;XM_005410445 XP_005410502 MODEL 8875561 protein-coding Yipf3 Yip1 domain family member 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN Golgi apparatus (ortholog); transport vesicle (ortholog) NW_004955437 9342030 9346315 - 102010835 AGCD01034527;GBCE01029764;XM_005389778 XP_005389835 MODEL 39132848 snrna U6 U6 spliceosomal RNA 9040282 protein-coding LOC102010745 zinc finger protein 20-like NW_004955569 269498 273133 + 102010745 AGCD01074571;XM_005413507 XP_005413564 MODEL 8870444 protein-coding LOC102014278 smad nuclear-interacting protein 1-like NW_004955433 17532271 17555122 - 102014278 AGCD01031821;AGCD01031822;XM_013516108 XP_013371562 MODEL 8798603 pseudo LOC102013101 MICOS complex subunit MIC27 pseudogene NW_004955424 28108796 28113637 - 102013101 AGCD01025147 MODEL 9014440 protein-coding LOC102021508 rhox homeobox family member 1-like NW_004955711 3374 5839 - 102021508 AGCD01078141;GBDF01163219;XM_013510180 XP_013365634 MODEL 8907091 ncrna LOC102012723 uncharacterized LOC102012723 NW_004955452 3278140 3282430 + 102012723 AGCD01043918;GBDF01194364;XR_262644 MODEL 9031914 protein-coding LOC102020379 cytochrome c oxidase subunit 4 isoform 1, mitochondrial INVOLVED IN response to nutrient (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); mitochondrial complex IV deficiency nuclear type 16 (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) NW_004955541 885824 890824 + 102020379 AGCD01071364;GBBH01003940;GBCB01002429;XM_005410982 XP_005411039 MODEL 8712491 protein-coding Rabac1 Rab acceptor 1 ENCODES a protein that exhibits GTPase binding (ortholog); identical protein binding (ortholog); proline-rich region binding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Diamond-Blackfan anemia (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) NW_004955555 897927 900406 + 102005848 AGCD01073051;GBDF01002277;XM_005412402 XP_005412459 MODEL 8799023 ncrna LOC102008020 uncharacterized LOC102008020 NW_004955512 5854546 5876484 - 102008020 AGCD01066779;AGCD01066780;GBCQ01118865;XR_264451 MODEL 8717809 protein-coding LOC102009512 aldehyde dehydrogenase family 3 member B2-like NW_004955422 17841051 17848453 + 102009512 AGCD01022932;GBDK01152699;XM_005384296 XP_005384353 MODEL 8814304 ncrna LOC102009937 uncharacterized LOC102009937 NW_004955415 6291304 6307243 - 102009937 AGCD01016013;AGCD01016014;GBBH01127465;XR_001233263 MODEL 8953012 protein-coding Fabp2 fatty acid binding protein 2 ENCODES a protein that exhibits fatty acid binding (ortholog); long-chain fatty acid binding (ortholog); long-chain fatty acid transmembrane transporter activity (ortholog); INVOLVED IN energy homeostasis (ortholog); fatty acid metabolic process (ortholog); fatty acid transport (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); carotid stenosis (ortholog); coronary artery disease (ortholog); FOUND IN apical cortex (ortholog); microvillus (ortholog) NW_004955428 20930512 20933950 + 102021995 AGCD01028128;XM_005386793 XP_005386850 MODEL 39132685 snrna U6 U6 spliceosomal RNA 8778606 protein-coding LOC102022209 olfactory receptor 5M9-like NW_004955511 1619937 1620869 - 102022209 AGCD01066376;XM_005408238 XP_005408295 MODEL 8784625 protein-coding LOC102023266 E3 ubiquitin-protein ligase TRIM38-like NW_004955483 1099077 1110250 + 102023266 AGCD01057640;AGCD01057641;AGCD01057642;AGCD01057643;GBCE01118982;GBCE01119007;XM_005403317 XP_005403374 MODEL 39132963 snrna U1 U1 spliceosomal RNA 8778730 protein-coding LOC102025414 olfactory receptor 15-like NW_004955581 734996 752949 - 102025414 AGCD01075692;AGCD01075693;XM_005414267 XP_005414324 MODEL 8957084 protein-coding LOC102003611 BPI fold-containing family C protein-like NW_004957015 28 1202 - 102003611 AGCD01080411;XM_005415219 XP_005415276 MODEL 9004919 protein-coding LOC102018101 arylacetamide deacetylase-like 4 NW_004955486 1192855 1214886 - 102018101 AGCD01058932;AGCD01058933;AGCD01058934;AGCD01058935;GBCE01042716;XM_013504149 XP_013359603 MODEL 8912748 protein-coding Nt5c3a 5'-nucleotidase, cytosolic IIIA ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); INVOLVED IN adenosine metabolic process (ortholog); CMP catabolic process (ortholog); dCMP catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) NW_004955617 240132 293278 - 102008807 AGCD01077275;AGCD01077276;GBDK01191583;XM_005414993;XM_005414994;XM_005414995;XM_005414996;XM_005414997;XM_013510143 XP_005415050;XP_005415051;XP_005415052;XP_005415053;XP_005415054;XP_013365597 MODEL 8768375 protein-coding Syp synaptophysin ENCODES a protein that exhibits cholesterol binding (ortholog); identical protein binding (ortholog); protein carrier activity (ortholog); INVOLVED IN endocytosis (ortholog); modulation of chemical synaptic transmission (ortholog); protein homooligomerization (ortholog); ASSOCIATED WITH cochlear disease; alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN basal part of cell; vestibular calyx terminal; excitatory synapse (ortholog) NW_004955543 675294 689579 - 102010632 AGCD01071598;AGCD01071599;GBDJ01316040;XM_005411331 XP_005411388 MODEL 626189153 snorna snoR38 Small nucleolar RNA R38 8947218 ncrna LOC102019334 uncharacterized LOC102019334 NW_004955555 524438 543781 - 102019334 AGCD01073035;AGCD01073036;GBDF01250812;XR_001232299;XR_264950;XR_264952 MODEL 39133740 snrna U5 U5 spliceosomal RNA 8964058 protein-coding Tbc1d1 TBC1 domain family member 1 INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); regulation of cilium assembly (ortholog); regulation of protein localization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleolus (ortholog) NW_004955443 9045312 9270617 - 102008269 AGCD01038342;AGCD01038343;AGCD01038344;AGCD01038345;AGCD01038346;GBCB01025606;GBCQ01036341;XM_013518063 XP_013373517 MODEL 9064285 protein-coding Ltv1 LTV1 ribosome biogenesis factor PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955436 16580412 16593093 - 102006950 AGCD01033926;GBCB01073266;XM_005389244 XP_005389301 MODEL 8814864 pseudo LOC102004685 death effector domain-containing protein pseudogene NW_004955467 541544 543081 - 102004685 AGCD01051226 MODEL 8892272 protein-coding Brinp2 BMP/retinoic acid inducible neural specific 2 INVOLVED IN cellular response to retinoic acid (ortholog); central nervous system neuron differentiation (ortholog); locomotion (ortholog); ASSOCIATED WITH oral squamous cell carcinoma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) NW_004955406 16748824 16840924 + 102018683 AGCD01006000;GBDJ01100677;XM_005374909 XP_005374966 MODEL 9063569 protein-coding Flrt3 fibronectin leucine rich transmembrane protein 3 ENCODES a protein that exhibits chemorepellent activity (ortholog); fibroblast growth factor receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN axon guidance (ortholog); cell-cell adhesion (ortholog); embryonic morphogenesis (ortholog); ASSOCIATED WITH hypogonadotropic hypogonadism 21 with or without anosmia (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); Spontaneous Abortions (ortholog); FOUND IN axon terminus (ortholog); axonal growth cone (ortholog); cell-cell junction (ortholog) NW_004955415 23669749 23683235 - 102004804 AGCD01016560;GBDK01192877;XM_005380892;XM_013512282 XP_005380949;XP_013367736 MODEL 8851567 protein-coding Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 INVOLVED IN axonemal central apparatus assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cough (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN axoneme (ortholog); cytoplasm (ortholog); motile cilium (ortholog) NW_004955414 17599549 17613724 - 102010892 AGCD01015245;GBDF01001565;XM_005379931 XP_005379988 MODEL 8909796 pseudo LOC102018905 60S ribosomal protein L7-like 1 pseudogene NW_004955465 3670775 3671551 - 102018905 AGCD01050388 MODEL 8983765 protein-coding Smad1 SMAD family member 1 ENCODES a protein that exhibits co-SMAD binding (ortholog); DEAD/H-box RNA helicase binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anti-Mullerian hormone receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); bone development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); Cocaine-Related Disorders (ortholog); colon adenocarcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955428 1357398 1429521 + 102006052 AGCD01027609;AGCD01027610;AGCD01027611;GBDJ01233141;XM_005386647;XM_013515300;XM_013515301 XP_005386704;XP_013370754;XP_013370755 MODEL 8842746 protein-coding Tec tec protein tyrosine kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); integrin-mediated signaling pathway (ortholog); regulation of platelet activation (ortholog); PARTICIPATES IN erythropoietin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); FOUND IN cell-cell junction (ortholog); cytoskeleton (ortholog); plasma membrane (ortholog) NW_004955443 339678 474029 + 102025850 AGCD01038099;AGCD01038100;AGCD01038101;AGCD01038102;AGCD01038103;AGCD01038104;AGCD01038105;AGCD01038106;AGCD01038107;AGCD01038108;AGCD01038109;AGCD01038110;AGCD01038111;GBDF01113226;XM_005391885 XP_005391942 MODEL 39132686 snrna U6 U6 spliceosomal RNA 9053850 protein-coding Kif7 kinesin family member 7 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); Agenesis of Corpus Callosum (ortholog); Arachnoid Cysts (ortholog); FOUND IN ciliary basal body (ortholog); ciliary tip (ortholog); cilium (ortholog) NW_004955416 15555959 15570925 + 102027179 AGCD01017335;GBCQ01123519;XM_005381548;XM_005381549;XM_013512554 XP_005381605;XP_005381606;XP_013368008 MODEL 9047003 protein-coding Thbs2 thrombospondin 2 INVOLVED IN negative regulation of angiogenesis (ortholog); positive regulation of synapse assembly (ortholog); ASSOCIATED WITH Cerebral Hemorrhage (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); platelet alpha granule (ortholog) NW_004955411 4315055 4347044 + 102023125 AGCD01011577;GBCE01137755;XM_005377646 XP_005377703 MODEL 8739661 protein-coding Slc12a3 solute carrier family 12 member 3 ENCODES a protein that exhibits enzyme binding (ortholog); protein serine/threonine kinase binding (ortholog); sodium ion transmembrane transporter activity (ortholog); INVOLVED IN chloride transport (ortholog); renal sodium ion absorption (ortholog); response to aldosterone (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH autistic disorder (ortholog); Bartter disease (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); extracellular exosome (ortholog) NW_004955433 14553752 14588317 + 102019523 AGCD01031722;GBCQ01012135;XM_005388362;XM_005388363 XP_005388419;XP_005388420 MODEL 39132849 snrna U6 U6 spliceosomal RNA 8734870 protein-coding Sdc2 syndecan 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); positive regulation of cell adhesion (ortholog); positive regulation of epithelial cell migration (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH cleft lip (ortholog); cleft palate (ortholog); melanoma (ortholog); FOUND IN glutamatergic synapse (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) NW_004955417 12462354 12563374 + 102006129 AGCD01018162;GBCQ01035364;XM_005381834;XM_005381835 XP_005381891;XP_005381892 MODEL 8881973 ncrna LOC102010746 uncharacterized LOC102010746 NW_004955446 646029 647588 + 102010746 AGCD01039946;GBDF01235337;XR_262363 MODEL 8953714 protein-coding Lcp2 lymphocyte cytosolic protein 2 INVOLVED IN mast cell activation (ortholog); T cell receptor signaling pathway (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell-cell junction (ortholog); cytosol (ortholog); plasma membrane raft (ortholog) NW_004955408 23200137 23246032 - 102016238 AGCD01008585;AGCD01008586;GBDI01176434;XM_005376313;XM_013509200;XM_013509206 XP_005376370;XP_013364654;XP_013364660 MODEL 8897222 pseudo LOC102013103 nuclear receptor-binding factor 2 pseudogene NW_004955425 22838039 22839048 + 102013103 AGCD01025835 MODEL 8935774 pseudo LOC102012724 ras-related protein Rab-5A pseudogene NW_004955404 17557735 17563974 - 102012724 AGCD01003594 MODEL 8983616 ncrna LOC102003935 uncharacterized LOC102003935 NW_004955405 35086 71659 - 102003935 AGCD01004552;GBBH01007880;XR_259346 MODEL 8719593 protein-coding Sypl1 synaptophysin like 1 ASSOCIATED WITH Breast Cancer, Familial (ortholog); intellectual disability (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN membrane (ortholog); secretory granule (ortholog); synaptic vesicle membrane (ortholog) NW_004955410 10571888 10590978 - 102027951 AGCD01010795;AGCD01010796;GBDF01047643;XM_005377266 XP_005377323 MODEL 39133072 snrna U6 U6 spliceosomal RNA 39132111 snrna U6 U6 spliceosomal RNA 8938961 protein-coding Immt inner membrane mitochondrial protein INVOLVED IN cristae formation (ortholog); mitochondrial calcium ion homeostasis (ortholog); PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cholangiocarcinoma (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) NW_004955424 1438158 1476552 + 102018941 AGCD01024237;GBDI01082771;XM_005385400;XM_005385402;XM_005385403;XM_005385404;XM_005385405;XM_013514670 XP_005385457;XP_005385459;XP_005385460;XP_005385461;XP_005385462;XP_013370124 MODEL 8902302 protein-coding LOC102009513 40S ribosomal protein S27-like NW_004955422 18850193 18850985 - 102009513 AGCD01022964;GBCQ01146185;XM_005384396 XP_005384453 MODEL 10214958 protein-coding LOC106147381 olfactory receptor 11G2-like NW_004955550 938518 939523 + 106147381 AGCD01072530;XM_013508551 XP_013364005 MODEL 8949032 protein-coding Tox2 TOX high mobility group box family member 2 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN female gonad development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); response to gonadotropin (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955445 13210606 13343344 - 102023539 AGCD01039770;AGCD01039771;GBDJ01115968;XM_005392491;XM_005392492;XM_013518387;XM_013518388;XM_013518389 XP_005392548;XP_005392549;XP_013373841;XP_013373842;XP_013373843 MODEL 9052937 pseudo LOC102016187 heterogeneous nuclear ribonucleoprotein A3-like NW_004955516 415318 416412 - 102016187 AGCD01067384 MODEL 8708675 protein-coding Ttc6 tetratricopeptide repeat domain 6 ASSOCIATED WITH Meckel syndrome (ortholog) NW_004955409 23349294 23580993 - 102020218 AGCD01010059;AGCD01010060;AGCD01010061;AGCD01010062;AGCD01010063;AGCD01010064;AGCD01010065;AGCD01010066;AGCD01010067;AGCD01010068;GBBH01162846;GBDI01355143;XM_013510165 XP_013365619 MODEL 8802828 protein-coding Habp2 hyaluronan binding protein 2 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); response to bleomycin (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); Neoplasm Metastasis (ortholog); pulmonary fibrosis (ortholog) NW_004955431 18572690 18604399 + 102007457 AGCD01030431;GBDF01208086;XM_005387787 XP_005387844 MODEL 8868529 protein-coding Gmppa GDP-mannose pyrophosphorylase A ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); mannose-1-phosphate guanylyltransferase (GTP) activity (ortholog); INVOLVED IN cognition (ortholog); GDP-mannose biosynthetic process (ortholog); GDP-mannose metabolic process (ortholog); ASSOCIATED WITH alacrima, achalasia, and impaired intellectual development syndrome (ortholog); cerebrotendinous xanthomatosis (ortholog); FOUND IN cytoplasm (ortholog); GDP-mannose pyrophosphorylase complex (ortholog) NW_004955453 13967118 13974351 - 102003939 AGCD01044855;GBDJ01418744;XM_005395516;XM_005395517;XM_005395518;XM_005395520;XM_005395521 XP_005395573;XP_005395574;XP_005395575;XP_005395577;XP_005395578 MODEL 9044298 protein-coding Fabp3 fatty acid binding protein 3 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); fatty acid binding (ortholog); icosatetraenoic acid binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cholesterol homeostasis (ortholog); fatty acid metabolic process (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Down syndrome (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN extracellular region (ortholog); sarcoplasm (ortholog) NW_004955452 9851182 9858735 - 102008178 AGCD01044261;GBDK01270117;XM_013519714 XP_013375168 MODEL 8776986 protein-coding Yipf4 Yip1 domain family member 4 ASSOCIATED WITH lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) NW_004955441 622401 655035 + 102009322 AGCD01036718;AGCD01036719;AGCD01036720;AGCD01036721;GBCB01040630;GBCE01055763;XM_013517616 XP_013373070 MODEL 8768475 protein-coding LOC102014286 cancer/testis antigen 47A-like NW_004955534 877150 879824 - 102014286 AGCD01070476;GBDF01016690;XM_005410452 XP_005410509 MODEL 8869745 protein-coding Lmo4 LIM domain only 4 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN motor neuron axon guidance (ortholog); negative regulation of protein-containing complex assembly (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH anencephaly (ortholog); cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN cell leading edge (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) NW_004955423 6849542 6865928 - 102017889 AGCD01023588;AGCD01023589;GBDJ01075782;GBDK01018084;XM_005385115 XP_005385172 MODEL 8795758 ncrna LOC102018106 uncharacterized LOC102018106 NW_004955422 17085787 17105838 - 102018106 AGCD01022909;AGCD01022910;AGCD01022911;AGCD01022912;GBDJ01421050;XR_001233992 MODEL 39131501 protein-coding SBK1 SH3 domain binding kinase 1 626189134 snorna snoR38 Small nucleolar RNA R38 9031473 protein-coding Nt5c3b 5'-nucleotidase, cytosolic IIIB ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); ASSOCIATED WITH cervical cancer (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog) NW_004955451 16034905 16042093 - 102025969 AGCD01043648;AGCD01043649;GBCE01153694;GBDF01126915;XM_005394626 XP_005394683 MODEL 8890043 protein-coding LOC102021509 keratin-associated protein 3-3 NW_004955451 15419155 15419938 - 102021509 AGCD01043607;GBDJ01056995;XM_005394379 XP_005394436 MODEL 8946184 protein-coding Gfm1 G elongation factor mitochondrial 1 ENCODES a protein that exhibits GTPase activity (ortholog); translation elongation factor activity (ortholog); INVOLVED IN mitochondrial translational elongation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); combined oxidative phosphorylation deficiency 1 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955448 9390576 9432919 + 102027473 AGCD01041472;AGCD01041473;GBDF01082492;XM_005393104 XP_005393161 MODEL 9061569 protein-coding Kif9 kinesin family member 9 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN extracellular matrix disassembly (ortholog); organelle disassembly (ortholog); regulation of flagellated sperm motility (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axonemal microtubule (ortholog); microtubule (ortholog); podosome (ortholog) NW_004955420 24968757 25011642 + 102015017 AGCD01021339;AGCD01021340;AGCD01021341;GBDF01049531;XM_005383403;XM_005383404;XM_005383405;XM_005383407;XM_005383408;XM_013513486;XM_013513487;XM_013513488 XP_005383460;XP_005383461;XP_005383462;XP_005383464;XP_005383465;XP_013368940;XP_013368941;XP_013368942 MODEL 9015649 ncrna LOC102008027 uncharacterized LOC102008027 NW_004955530 1812786 1910843 - 102008027 AGCD01069900;AGCD01069901;AGCD01069902;GBDF01148074;XR_001232002 MODEL 8946276 ncrna LOC102005374 uncharacterized LOC102005374 NW_004955479 2013640 2022532 + 102005374 AGCD01056260;GBDF01098004;XR_263728 MODEL 8724092 protein-coding Tbc1d10a TBC1 domain family member 10A ENCODES a protein that exhibits GTPase activator activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN positive regulation of proteolysis (ortholog); regulation of cilium assembly (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); lung cancer (ortholog); FOUND IN plasma membrane (ortholog) NW_004955455 4537634 4570949 - 102018564 AGCD01045679;AGCD01045680;GBDF01052787;XM_005396252 XP_005396309 MODEL 8709588 protein-coding Rabep1 rabaptin, RAB GTPase binding effector protein 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN Golgi to plasma membrane transport (ortholog); protein localization to ciliary membrane (ortholog); regulation of postsynaptic neurotransmitter receptor internalization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); endocytic vesicle (ortholog); endosome (ortholog) NW_004955467 10613671 10748122 + 102026623 AGCD01051578;AGCD01051579;AGCD01051580;AGCD01051581;AGCD01051582;AGCD01051583;GBDF01156135;XM_005399641;XM_005399642 XP_005399698;XP_005399699 MODEL 8779811 protein-coding Slc25a51 solute carrier family 25 member 51 ENCODES a protein that exhibits NAD transmembrane transporter activity (ortholog); INVOLVED IN aerobic electron transport chain (ortholog); mitochondrial NAD transmembrane transport (ortholog); NAD+ biosynthetic process via the salvage pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) NW_004955419 28580055 28594049 + 102028197 AGCD01020467;AGCD01020468;AGCD01020469;GBCE01108733;GBDF01122414;XM_013513300 XP_013368754 MODEL 8798867 protein-coding Dnajb14 DnaJ heat shock protein family (Hsp40) member B14 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); INVOLVED IN protein folding (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog) NW_004955496 7746896 7782424 + 102021891 AGCD01062385;GBDF01156236;XM_013505382 XP_013360836 MODEL 8807323 protein-coding Flt1 fms related receptor tyrosine kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); growth factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel morphogenesis (ortholog); branching involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN axitinib pharmacodynamics pathway; bevacizumab pharmacodynamics pathway; glypican signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); FOUND IN extracellular region (ortholog); nucleus (ortholog); plasma membrane (ortholog) NW_004955497 7653309 7831737 - 102006932 AGCD01062681;AGCD01062682;GBDK01093188;XM_005406358;XM_005406359;XM_005406360 XP_005406415;XP_005406416;XP_005406417 MODEL 8747424 pseudo LOC102003613 centrosomal protein of 57 kDa pseudogene NW_004955403 17238602 17239548 - 102003613 AGCD01002072 MODEL 8760976 protein-coding Tecpr1 tectonin beta-propeller repeat containing 1 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); macroautophagy (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN autophagosome membrane (ortholog); early endosome membrane (ortholog); lysosomal membrane (ortholog) NW_004955460 14106711 14137983 - 102027725 AGCD01048738;AGCD01048739;AGCD01048740;GBDI01139627;XM_005397911;XM_013521165;XM_013521166 XP_005397968;XP_013376619;XP_013376620 MODEL 8849276 protein-coding LOC102020380 olfactory receptor 12-like NW_004955542 1157297 1158244 - 102020380 AGCD01071490;XM_005411172 XP_005411229 MODEL 8793702 pseudo LOC102004689 L-lactate dehydrogenase A chain pseudogene NW_004955414 13639147 13640738 - 102004689 AGCD01015115;XR_260167 MODEL 730469558 snorna SNORA1 Small nucleolar RNA SNORA1 8850776 protein-coding LOC102010748 transmembrane protease serine 11G-like NW_004955447 4856552 4890901 + 102010748 AGCD01040735;GBDF01305458;XM_005392830 XP_005392887 MODEL 8889230 ncrna LOC102022210 uncharacterized LOC102022210 NW_004955430 21915871 21918767 - 102022210 AGCD01029779;GBDI01242038;XR_001234565;XR_261435 MODEL 9001062 protein-coding LOC102018913 uncharacterized protein C12orf71 homolog NW_004955413 6921977 6923948 - 102018913 AGCD01013784;GBDF01150110;XM_005379614 XP_005379671 MODEL 39132965 snrna U1 U1 spliceosomal RNA 8764699 pseudo LOC102025415 transcription initiation factor TFIID subunit 12 pseudogene NW_004955449 9697333 9697775 - 102025415 AGCD01042052 MODEL 8967107 protein-coding Imp3 IMP U3 small nucleolar ribonucleoprotein 3 INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN Mpp10 complex (ortholog); nucleolus (ortholog); nucleus (ortholog) NW_004955450 2690814 2692336 + 102026925 AGCD01042395;GBDF01087621;XM_005393505 XP_005393562 MODEL 39132112 snrna U6 U6 spliceosomal RNA 9034434 protein-coding Smad2 SMAD family member 2 ENCODES a protein that exhibits chromatin binding (ortholog); co-SMAD binding (ortholog); disordered domain specific binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adrenal gland development (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN activin signaling pathway; altered transforming growth factor-beta Smad dependent signaling pathway; colorectal cancer pathway; ASSOCIATED WITH acromicric dysplasia (ortholog); acute myeloid leukemia (ortholog); aortic aneurysm (ortholog); FOUND IN activin responsive factor complex (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955402 33131760 33217144 - 102007387 AGCD01000837;AGCD01000838;GBDJ01114312;GBDJ01387571;XM_013510523 XP_013365977 MODEL 39132687 snrna U6 U6 spliceosomal RNA 8751594 protein-coding E2f8 E2F transcription factor 8 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell cycle comprising mitosis without cytokinesis (ortholog); cell population proliferation (ortholog); chorionic trophoblast cell differentiation (ortholog); ASSOCIATED WITH Disease Progression (ortholog); hepatocellular carcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955476 197699 215227 - 102003762 AGCD01055192;GBDF01123925;XM_005401713;XM_005401714;XM_005401715;XM_013503012;XM_013503013 XP_005401770;XP_005401771;XP_005401772;XP_013358466;XP_013358467 MODEL 8751134 protein-coding Slc12a4 solute carrier family 12 member 4 ENCODES a protein that exhibits ATP binding (ortholog); potassium:chloride symporter activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog) NW_004955484 8749194 8772599 + 102017576 AGCD01058396;GBDF01116937;XM_005403604 XP_005403661 MODEL 39133741 snrna U6 U6 spliceosomal RNA 39132851 snrna U6 U6 spliceosomal RNA 8983221 protein-coding LOC102019337 zinc finger protein 112 NW_004955555 1654784 1704689 - 102019337 AGCD01073096;AGCD01073097;GBCE01005259;GBDK01219670;XM_013508735 XP_013364189 MODEL 8919179 protein-coding Tox3 TOX high mobility group box family member 3 ENCODES a protein that exhibits chromatin binding (ortholog); phosphoprotein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); negative regulation of neuron apoptotic process (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); Cleft Lip with or without Cleft Palate, Nonsyndromic, 7 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) NW_004955433 10328886 10426540 - 102022419 AGCD01031627;GBDI01013832;GBDI01325258;XM_005388284;XM_005388285 XP_005388341;XP_005388342 MODEL 8765754 ncrna LOC102014290 uncharacterized LOC102014290 NW_004955441 6783381 6790395 - 102014290 AGCD01036941;AGCD01036942;GBDF01251741;XR_262053 MODEL 8775166 ncrna LOC102012730 uncharacterized LOC102012730 NW_004955407 18730128 18738547 + 102012730 AGCD01007275;GBDF01261213;XR_259575 MODEL 8737158 protein-coding Luc7l LUC7 like ENCODES a protein that exhibits identical protein binding (ortholog); RS domain binding (ortholog); INVOLVED IN negative regulation of striated muscle tissue development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN nucleus (ortholog) NW_004955442 16965788 16997329 + 102005974 AGCD01037928;AGCD01037929;AGCD01037930;AGCD01037931;GBDF01080671;XM_005391669;XM_013517876 XP_005391726;XP_013373330 MODEL 8861628 protein-coding Sbk1 SH3 domain binding kinase 1 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN peptidyl-serine phosphorylation (ortholog); peptidyl-threonine phosphorylation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog) NW_004955493 6383626 6394919 + 102016610 AGCD01061100;GBBH01021962;GBCB01041743;XM_013504891;XM_013504892;XM_013504893 XP_013360345;XP_013360346;XP_013360347 MODEL 8736728 protein-coding LOC102009952 uncharacterized LOC102009952 NW_004955420 29396157 29403592 - 102009952 AGCD01021499;AGCD01021500;GBCE01185548;XM_013513408;XR_001233705;XR_001233706;XR_001233707;XR_260774;XR_260775 XP_013368862 MODEL 8713765 protein-coding Nt5dc1 5'-nucleotidase domain containing 1 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog) NW_004955526 568307 604941 - 102029785 AGCD01069242;AGCD01069243;AGCD01069244;GBCC01048928;XM_013507352 XP_013362806 MODEL 8803746 protein-coding Cyyr1 cysteine and tyrosine rich 1 NW_004955407 26208335 26313566 - 102021309 AGCD01007525;AGCD01007526;AGCD01007527;GBDJ01299809;XM_005375600 XP_005375657 MODEL 8717172 pseudo LOC102008034 MAP3K12-binding inhibitory protein 1 pseudogene NW_004955441 160336 161394 + 102008034 AGCD01036685 MODEL 8714420 protein-coding Sypl2 synaptophysin like 2 INVOLVED IN heart development (ortholog); intracellular calcium ion homeostasis (ortholog); substantia nigra development (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); sarcoma (ortholog); stomach cancer (ortholog) NW_004955435 12889266 12901455 + 102029221 AGCD01033172;AGCD01033173;GBDI01297200;GBDI01297201;XM_005388862 XP_005388919 MODEL 9031116 protein-coding Lct lactase ENCODES a protein that exhibits beta-glucosidase activity (ortholog); cellobiose glucosidase activity (ortholog); galactosylceramidase activity (ortholog); INVOLVED IN cellobiose catabolic process (ortholog); glycosylceramide catabolic process (ortholog); lactose catabolic process (ortholog); PARTICIPATES IN galactose metabolic pathway; galactosemia pathway; lactose degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adult respiratory distress syndrome (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); external side of apical plasma membrane (ortholog) NW_004955440 3148730 3197110 - 102009883 AGCD01036236;AGCD01036237;GBDJ01374567;XM_005390764 XP_005390821 MODEL 8805575 ncrna LOC102005378 uncharacterized LOC102005378 NW_004955418 11451076 11451817 - 102005378 AGCD01019004;GBDF01090330;XR_260556 MODEL 9065969 protein-coding Brinp3 BMP/retinoic acid inducible neural specific 3 INVOLVED IN cellular response to retinoic acid (ortholog); central nervous system neuron differentiation (ortholog); exploration behavior (ortholog); ASSOCIATED WITH aggressive periodontitis (ortholog); cerebral infarction (ortholog); Chronic Periodontitis (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) NW_004955406 27870115 28240328 - 102015074 AGCD01006290;AGCD01006291;AGCD01006292;AGCD01006293;AGCD01006294;AGCD01006295;GBDF01307752;XM_005375093;XM_005375094;XM_005375095 XP_005375150;XP_005375151;XP_005375152 MODEL 8845286 protein-coding LOC102023269 calmodulin-like protein 3 ASSOCIATED WITH hepatocellular carcinoma (ortholog); Lung Neoplasms (ortholog); Neoplasm Metastasis (ortholog) NW_004955421 22205476 22219715 + 102023269 AGCD01022128;GBDI01217492;XM_013513788;XM_013513789;XR_001233870;XR_001233871;XR_001233872;XR_001233873;XR_001233874 XP_013369242;XP_013369243 MODEL 8838936 ncrna LOC102009517 uncharacterized LOC102009517 NW_004955423 4665440 4705460 + 102009517 AGCD01023541;AGCD01023542;AGCD01023543;GBDF01110689;XR_260953 MODEL 9033854 protein-coding Tbc1d10b TBC1 domain family member 10B ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of cilium assembly (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); high grade glioma (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) NW_004955493 7286030 7298223 - 102012446 AGCD01061175;AGCD01061176;AGCD01061177;GBCE01117663;GBCE01117664;XM_005405250 XP_005405307 MODEL 9015767 ncrna LOC102016192 uncharacterized LOC102016192 NW_004955435 13810505 13822088 - 102016192 AGCD01033212;GBDF01027837;XR_261688 MODEL 10091045 ncrna LOC106147383 uncharacterized LOC106147383 NW_004955550 1245880 1253868 + 106147383 AGCD01072557;AGCD01072558;GBCB01010548;XR_001232259;XR_001232260;XR_001232261;XR_001232262 MODEL 8974815 protein-coding Ttc7a tetratricopeptide repeat domain 7A INVOLVED IN hemopoiesis (ortholog); intracellular iron ion homeostasis (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH cervical cancer (ortholog); clear cell renal cell carcinoma (ortholog); colitis (ortholog); FOUND IN cytoplasm (ortholog) NW_004955441 13804791 13915969 + 102016425 AGCD01037163;GBBH01093658;GBCQ01069926;XM_013517568 XP_013373022 MODEL 8914915 protein-coding Rabep2 rabaptin, RAB GTPase binding effector protein 2 INVOLVED IN regulation of cilium assembly (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cocaine dependence (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) NW_004955493 6548951 6560039 + 102014061 AGCD01061119;GBDI01005384;XM_005405161 XP_005405218 MODEL 8944439 protein-coding Sdc3 syndecan 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); neuron projection extension (ortholog); regulation of cell migration (ortholog); PARTICIPATES IN melanocortin system pathway; syndecan signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN axon (ortholog); filopodium (ortholog); growth cone (ortholog) NW_004955452 9442860 9479776 - 102003086 AGCD01044237;AGCD01044238;GBCB01111838;XM_005395001;XM_005395002;XM_013519686 XP_005395058;XP_005395059;XP_013375140 MODEL 8871430 pseudo LOC102018108 60S ribosomal protein L9 pseudogene NW_004955424 10648402 10648984 - 102018108 AGCD01024523 MODEL 8914046 protein-coding Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 ENCODES a protein that exhibits ATPase activator activity (ortholog); Hsp70 protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cell growth (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH autosomal recessive distal hereditary motor neuronopathy 5 (ortholog); Breast Cancer, Familial (ortholog); cerebrotendinous xanthomatosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955453 14147286 14154396 - 102010224 AGCD01044858;GBCE01074212;XM_005395542;XM_005395545;XM_013519969;XM_013519970 XP_005395599;XP_005395602;XP_013375423;XP_013375424 MODEL 8900337 protein-coding Lmo7 LIM domain 7 ENCODES a protein that exhibits actinin binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Breast Cancer, Familial (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); apical plasma membrane (ortholog) NW_004955404 31197156 31388571 - 102020628 AGCD01004017;AGCD01004018;GBCQ01064193;GBDF01082235;XM_005374167;XM_005374168;XM_005374169;XM_013516543;XM_013516544;XM_013516549;XM_013516551;XM_013516553;XM_013516561;XM_013516563;XM_013516566;XM_013516569;XM_013516572 XP_005374224;XP_005374225;XP_005374226;XP_013371997;XP_013371998;XP_013372003;XP_013372005;XP_013372007;XP_013372015;XP_013372017;XP_013372020;XP_013372023;XP_013372026 MODEL 8748436 pseudo LOC102021510 60S ribosomal protein L36 pseudogene NW_004955403 57896896 57898033 + 102021510 AGCD01003167;XM_005373867 MODEL 9019262 ncrna LOC102003942 uncharacterized LOC102003942 NW_004955406 42823741 42853661 + 102003942 AGCD01006719;GBDI01207600;XR_259536;XR_259537 MODEL 9042292 protein-coding Gfm2 GTP dependent ribosome recycling factor mitochondrial 2 ENCODES a protein that exhibits GTPase activity (ortholog); translation elongation factor activity (ortholog); INVOLVED IN mitochondrial translation (ortholog); mitochondrial translational elongation (ortholog); ribosome disassembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cerebral palsy (ortholog); FOUND IN mitochondrion (ortholog) NW_004955425 25904020 25942384 + 102030098 AGCD01025939;GBDF01192750;XM_005386062;XM_005386064;XM_013514801 XP_005386119;XP_005386121;XP_013370255 MODEL 8704083 ncrna LOC102020382 uncharacterized LOC102020382 NW_004955439 14686866 14703870 + 102020382 AGCD01035985;GBBH01173721;XR_261991 MODEL 8791480 protein-coding Kifbp kinesin family binding protein ENCODES a protein that exhibits kinesin binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); mitochondrion transport along microtubule (ortholog); transport along microtubule (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 3 (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955437 22015112 22040439 - 102026908 AGCD01034926;GBDF01118171;XM_005390099 XP_005390156 MODEL 8820897 pseudo LOC102004690 glucocorticoid modulatory element-binding protein 1 pseudogene NW_004955469 10849261 10850647 + 102004690 AGCD01052551 MODEL 8727246 protein-coding Thbs3 thrombospondin 3 ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN bone trabecula formation (ortholog); growth plate cartilage development (ortholog); ossification involved in bone maturation (ortholog); ASSOCIATED WITH genetic disease (ortholog); prostate cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) NW_004955545 1664372 1675810 - 102003381 AGCD01071865;AGCD01071866;GBDK01058843;XM_005411591;XM_005411593;XM_005411594;XM_013508309;XM_013508310 XP_005411648;XP_005411650;XP_005411651;XP_013363763;XP_013363764 MODEL 39132967 snrna U1 U1 spliceosomal RNA 8749806 protein-coding Gmppb GDP-mannose pyrophosphorylase B ENCODES a protein that exhibits mannose-1-phosphate guanylyltransferase (GTP) activity (ortholog); INVOLVED IN GDP-mannose biosynthetic process (ortholog); GDP-mannose metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH amblyopia (ortholog); autistic disorder (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2T (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); GDP-mannose pyrophosphorylase complex (ortholog) NW_004955532 1622605 1624900 - 102015564 AGCD01070196;GBCE01117634;XM_005410207 XP_005410264 MODEL 8901390 protein-coding Fabp4 fatty acid binding protein 4 ENCODES a protein that exhibits hormone receptor binding (ortholog); lipase activator activity (ortholog); long-chain fatty acid binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cellular response to lithium ion (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); contact dermatitis (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog); nucleus (ortholog) NW_004955444 141955 146279 + 102007709 AGCD01038652;GBCQ01009929;XM_005392054 XP_005392111 MODEL 8811866 ncrna LOC102005384 uncharacterized LOC102005384 NW_004955488 8933146 8961329 - 102005384 AGCD01059736;AGCD01059737;AGCD01059738;AGCD01059739;GBDF01190452;XR_264007 MODEL 8970231 protein-coding Imp4 IMP U3 small nucleolar ribonucleoprotein 4 INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN Mpp10 complex (ortholog); nucleolus (ortholog); preribosome (ortholog) NW_004955459 30502 33589 + 102012066 AGCD01047923;GBDF01049446;XM_005397541 XP_005397598 MODEL 8909328 protein-coding Slc25a53 solute carrier family 25 member 53 ASSOCIATED WITH high grade glioma (ortholog); melanoma (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955548 947623 1008085 - 102029904 AGCD01072349;AGCD01072350;AGCD01072351;AGCD01072352;AGCD01072353;GBCE01004957;XM_005412000;XM_005412001;XM_005412003;XM_005412004;XM_005412005;XM_013508524;XM_013508525;XM_013508526;XM_013508527;XR_001232240 XP_005412057;XP_005412058;XP_005412060;XP_005412061;XP_005412062;XP_013363978;XP_013363979;XP_013363980;XP_013363981 MODEL 9061329 ncrna LOC102003614 uncharacterized LOC102003614 NW_004955404 19125609 19150116 - 102003614 AGCD01003639;GBDK01198293;XR_259318 MODEL 8754149 protein-coding LOC102013106 centrin-4-like NW_004955428 17966176 17970742 + 102013106 AGCD01028055;GBCQ01125606;XM_005386762;XM_005386763 XP_005386819;XP_005386820 MODEL 8755730 ncrna LOC102019338 uncharacterized LOC102019338 NW_004955570 1719054 1724037 + 102019338 AGCD01074826;XR_265047 MODEL 39133073 snrna U6 U6 spliceosomal RNA 8885275 protein-coding Tecpr2 tectonin beta-propeller repeat containing 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); cervical cancer (ortholog) NW_004955538 1658177 1733334 + 102030122 AGCD01071079;AGCD01071080;AGCD01071081;AGCD01071082;AGCD01071083;GBBH01051556;XM_005410750;XM_005410751;XM_005410752;XM_005410753;XM_005410754 XP_005410807;XP_005410808;XP_005410809;XP_005410810;XP_005410811 MODEL 8800238 pseudo LOC102003943 forkhead box protein M1 pseudogene NW_004955406 36927530 36938489 + 102003943 AGCD01006570 MODEL 8808123 protein-coding LOC102010752 olfactory receptor 10V1-like NW_004955580 1278611 1279549 + 102010752 AGCD01075652;GBBH01028735;XM_005414226 XP_005414283 MODEL 8702316 protein-coding Habp4 hyaluronan binding protein 4 ENCODES a protein that exhibits SUMO binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); PML body organization (ortholog); positive regulation of RNA splicing (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) NW_004955422 23449175 23475919 - 102010273 AGCD01023190;GBDK01134940;XM_005384698;XM_005384699 XP_005384755;XP_005384756 MODEL 8974701 pseudo LOC102008035 epimerase family protein SDR39U1 pseudogene NW_004955548 325489 327240 - 102008035 AGCD01072330 MODEL 8836267 protein-coding Czib CXXC motif containing zinc binding protein ENCODES a protein that exhibits zinc ion binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); carnitine palmitoyltransferase II deficiency (ortholog); cervical cancer (ortholog) NW_004955464 5930805 5937061 + 102012413 AGCD01050015;GBCE01031785;XM_005398560;XM_013521688;XM_013521689;XM_013521690 XP_005398617;XP_013377142;XP_013377143;XP_013377144 MODEL 8848807 protein-coding Sys1 SYS1 golgi trafficking protein ASSOCIATED WITH multiple sclerosis (ortholog) NW_004955445 11934907 11975670 - 102006624 AGCD01039727;AGCD01039728;AGCD01039729;AGCD01039730;GBDJ01091542;XM_005392430;XM_005392431 XP_005392487;XP_005392488 MODEL 8846677 protein-coding LOC102020385 olfactory receptor 4K15-like NW_004955550 392606 393649 - 102020385 AGCD01072498;XM_005412129 XP_005412186 MODEL 9041332 protein-coding Tbc1d10c TBC1 domain family member 10C INVOLVED IN negative regulation of B cell activation (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN filopodium membrane (ortholog); plasma membrane (ortholog) NW_004955422 18069686 18075795 - 102023046 AGCD01022936;GBDF01294484;XM_005384347;XM_005384348 XP_005384404;XP_005384405 MODEL 8891083 protein-coding Lctl lactase like INVOLVED IN lens morphogenesis in camera-type eye (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uveal melanoma (ortholog); FOUND IN brush border (ortholog); endoplasmic reticulum (ortholog) NW_004955450 9127151 9139836 + 102028042 AGCD01042585;GBBH01100376;XM_005393699 XP_005393756 MODEL 39132701 snrna U6 U6 spliceosomal RNA 39133409 snrna U6 U6 spliceosomal RNA 8750004 protein-coding E4f1 E4F transcription factor 1 ENCODES a protein that exhibits cAMP response element binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN DNA replication (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); spindle (ortholog) NW_004955442 15031210 15041437 - 102026046 AGCD01037854;GBCQ01125643;XM_005391435;XM_005391436;XM_005391437;XM_005391438;XM_013517726;XM_013517727;XM_013517728 XP_005391492;XP_005391493;XP_005391494;XP_005391495;XP_013373180;XP_013373181;XP_013373182 MODEL 8997249 protein-coding Sdc4 syndecan 4 ENCODES a protein that exhibits fibronectin binding (ortholog); identical protein binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN inner ear receptor cell stereocilium organization (ortholog); negative regulation of T cell proliferation (ortholog); neural tube closure (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH bacterial infectious disease (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cell surface (ortholog); costamere (ortholog); extracellular region (ortholog) NW_004955445 11990916 12009178 + 102008039 AGCD01039731;GBCQ01033149;XM_005392434 XP_005392491 MODEL 9019379 protein-coding LOC102013545 olfactory receptor 12-like NW_004955542 1216378 1219233 - 102013545 AGCD01071494;AGCD01071495;XM_005411243 XP_005411300 MODEL 8858821 ncrna LOC102018111 uncharacterized LOC102018111 NW_004955499 5787418 5804841 - 102018111 AGCD01063529;GBDJ01146430;XR_264221 MODEL 730469562 snorna SNORA1 Small nucleolar RNA SNORA1 8908836 protein-coding Flt3 fms related receptor tyrosine kinase 3 ENCODES a protein that exhibits cytokine receptor activity (ortholog); nuclear glucocorticoid receptor binding (ortholog); phosphatidylinositol 3-kinase binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); B cell differentiation (ortholog); cellular response to cytokine stimulus (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955497 7357533 7441215 - 102006150 AGCD01062671;AGCD01062672;AGCD01062673;AGCD01062674;GBBH01210557;GBDI01027559;XM_013505445 XP_013360899 MODEL 8910506 gene LOC102012734 Ig lambda-2 chain V region-like NW_004955455 6800743 6801214 + 102012734 AGCD01045813 MODEL 39131299 protein-coding NT5DC1 5'-nucleotidase domain containing 1 8959045 protein-coding Luc7l3 LUC7 like 3 pre-mRNA splicing factor ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN RNA splicing (ortholog); ASSOCIATED WITH cervical cancer (ortholog); esophageal cancer (ortholog); lung cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955451 11027949 11062521 - 102029690 AGCD01043339;AGCD01043340;AGCD01043341;GBBH01088747;XM_005394123;XM_005394125;XM_005394127;XM_013519421;XM_013519422;XM_013519423 XP_005394180;XP_005394182;XP_005394184;XP_013374875;XP_013374876;XP_013374877 MODEL 8909239 pseudo LOC102025417 calpain-7 pseudogene NW_004955589 1012898 1013834 - 102025417 AGCD01076189 MODEL 39132113 snrna U6 U6 spliceosomal RNA 39132688 snrna U6 U6 spliceosomal RNA 8720662 protein-coding Yipf5 Yip1 domain family member 5 INVOLVED IN Golgi organization (ortholog); insulin processing (ortholog); regulation of ER to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN COPII-coated ER to Golgi transport vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog) NW_004955415 9795214 9809871 + 102021548 AGCD01016110;GBDF01085610;XM_005380690 XP_005380747 MODEL 8726975 protein-coding LOC102023270 fibrillin-3-like NW_004955489 7357305 7439090 - 102023270 AGCD01059983;GBDF01188439;GBDK01150101;XM_013504457 XP_013359911 MODEL 8810186 protein-coding Smad3 SMAD family member 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); bHLH transcription factor binding (ortholog); chromatin binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adrenal gland development (ortholog); apoptotic process (ortholog); PARTICIPATES IN activin signaling pathway; altered transforming growth factor-beta Smad dependent signaling pathway; colorectal cancer pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); alcoholic cardiomyopathy (ortholog); alcoholic liver cirrhosis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955450 8747651 8842003 - 102025963 AGCD01042576;GBCE01054141;XM_005393692;XM_005393694;XM_013518932 XP_005393749;XP_005393751;XP_013374386 MODEL 8959995 protein-coding Ttc7b tetratricopeptide repeat domain 7B INVOLVED IN phosphatidylinositol phosphate biosynthetic process (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) NW_004955438 12946594 13165239 - 102014288 AGCD01035276;AGCD01035277;AGCD01035278;AGCD01035279;AGCD01035280;GBCB01023300;XM_005390284;XM_013517238;XM_013517239;XM_013517240;XM_013517241 XP_005390341;XP_013372692;XP_013372693;XP_013372694;XP_013372695 MODEL 8882122 protein-coding Rabepk Rab9 effector protein with kelch motifs ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); FOUND IN endosome membrane (ortholog) NW_004955419 3061838 3096693 - 102017020 AGCD01019701;AGCD01019702;AGCD01019703;AGCD01019704;AGCD01019705;GBDJ01282527;XM_005382469;XM_005382470;XM_005382473;XM_013513179 XP_005382526;XP_005382527;XP_005382530;XP_013368633 MODEL 8965659 protein-coding Gmpr guanosine monophosphate reductase ENCODES a protein that exhibits GMP reductase activity (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955483 9559079 9608807 - 102026325 AGCD01057861;GBCB01007020;XM_005403414;XM_005403415 XP_005403471;XP_005403472 MODEL 8714502 ncrna LOC102005387 uncharacterized LOC102005387 NW_004955493 5235633 5241231 + 102005387 AGCD01061061;GBDF01080114;XR_001231263 MODEL 8989846 protein-coding Dnajb3 DnaJ heat shock protein family (Hsp40) member B3 FOUND IN acrosomal vesicle (ortholog); centrosome (ortholog); cytoplasm (ortholog) NW_004955453 2399155 2400158 + 102005993 AGCD01044626;GBDF01008616;XM_005395337 XP_005395394 MODEL 9017307 ncrna LOC102022212 uncharacterized LOC102022212 NW_004955513 1174004 1189098 - 102022212 AGCD01066845;GBDF01010708;XR_001231739 MODEL 8949646 ncrna LOC102021515 uncharacterized LOC102021515 NW_004955405 40307846 40312195 - 102021515 AGCD01005512;GBDF01157665;XR_001235929;XR_259451;XR_259452 MODEL 8887047 protein-coding LOC102009953 uncharacterized LOC102009953 NW_004955489 8135465 8209866 - 102009953 AGCD01060001;AGCD01060002;AGCD01060003;AGCD01060004;AGCD01060005;AGCD01060006;AGCD01060007;GBDJ01241202;XM_013504450 XP_013359904 MODEL 8819788 protein-coding Lmod1 leiomodin 1 INVOLVED IN actin nucleation (ortholog); positive regulation of actin filament polymerization (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); endometriosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN actin filament (ortholog); myofibril (ortholog); sarcomere (ortholog) NW_004955406 37967098 38012908 - 102019980 AGCD01006581;AGCD01006582;GBDF01014788;XM_005375196 XP_005375253 MODEL 8968973 protein-coding Sbk2 SH3 domain binding kinase family member 2 ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog) NW_004955567 778971 783363 + 102019860 AGCD01074432;GBCB01000069;XM_005413309;XM_005413310 XP_005413366;XP_005413367 MODEL 8823516 pseudo LOC102018924 40S ribosomal protein S24 pseudogene NW_004955475 10115494 10123426 - 102018924 AGCD01055082 MODEL 39133074 snrna U6 U6 spliceosomal RNA 9007829 protein-coding LOC102013554 olfactory receptor 4L1-like NW_004955550 104998 126818 - 102013554 AGCD01072481;AGCD01072482;XM_005412028 XP_005412085 MODEL 8885623 protein-coding Gfod1 Gfo/Idh/MocA-like oxidoreductase domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); ovarian serous cystadenocarcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog) NW_004955465 1235917 1338072 + 102011749 AGCD01050338;GBCB01074136;XM_005398800;XM_005398801;XM_005398803;XM_005398804;XM_013521857 XP_005398857;XP_005398858;XP_005398860;XP_005398861;XP_013377311 MODEL 8719840 protein-coding LOC102009525 sperm motility kinase 2B-like NW_004955429 13400335 13403083 + 102009525 AGCD01028747;GBDK01097126;XM_005386993 XP_005387050 MODEL 8754757 protein-coding Kifc1 kinesin family member C1 INVOLVED IN mitotic metaphase chromosome alignment (ortholog); mitotic spindle assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955437 1923136 1941094 + 102004639 AGCD01034243;AGCD01034244;GBBH01205563;XM_005389490;XM_013517018;XM_013517019;XM_013517020 XP_005389547;XP_013372472;XP_013372473;XP_013372474 MODEL 9018507 protein-coding LOC102003944 keratin-associated protein 15-1-like NW_004955407 29796762 29797163 + 102003944 AGCD01007615;XM_005375632 XP_005375689 MODEL 10165575 ncrna LOC106147384 uncharacterized LOC106147384 NW_004955408 5966487 5969357 + 106147384 AGCD01008161;GBBH01175224;XR_001232263 MODEL 8877918 protein-coding LOC102010753 putative uncharacterized protein ZNRD1-AS1 NW_004955583 186389 190965 - 102010753 AGCD01075800;AGCD01075801;GBDI01025273;XM_013509840 XP_013365294 MODEL 8785285 protein-coding Slc12a5 solute carrier family 12 member 5 ENCODES a protein that exhibits ammonium channel activity (ortholog); chloride transmembrane transporter activity (ortholog); potassium:chloride symporter activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); chemical synaptic transmission (ortholog); chloride transport (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 34 (ortholog); Developmental Disabilities (ortholog); FOUND IN cell periphery (ortholog); dendrite membrane (ortholog); dendritic shaft (ortholog) NW_004955445 11252732 11290890 - 102022340 AGCD01039685;GBDK01041979;XM_005392389;XM_005392390;XM_005392391;XM_005392392 XP_005392446;XP_005392447;XP_005392448;XP_005392449 MODEL 39132969 snrna U1 U1 spliceosomal RNA 8916132 protein-coding Tox4 TOX high mobility group box family member 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN positive regulation of gluconeogenesis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) NW_004955550 2195710 2209729 + 102013344 AGCD01072611;GBDF01045487;XM_005412118;XM_013508582 XP_005412175;XP_013364036 MODEL 39132689 snrna U6 U6 spliceosomal RNA 8755482 protein-coding Fabp5 fatty acid binding protein 5 ENCODES a protein that exhibits fatty acid binding (ortholog); identical protein binding (ortholog); long-chain fatty acid transmembrane transporter activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); glucose metabolic process (ortholog); lipid metabolic process (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); Myocardial Ischemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955444 325515 329248 - 102007823 AGCD01038663;GBCE01001389;GBDK01231352;XM_013518222 XP_013373676 MODEL 8953676 protein-coding Slc26a1 solute carrier family 26 member 1 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); oxalate transmembrane transporter activity (ortholog); solute:inorganic anion antiporter activity (ortholog); INVOLVED IN chloride transport (ortholog); oxalate transport (ortholog); sulfate transmembrane transport (ortholog); ASSOCIATED WITH Calcium Oxalate Nephrolithiasis 1 (ortholog); genetic disease (ortholog); Hyperoxaluria (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) NW_004955514 476062 484710 - 102011141 AGCD01067012;GBCQ01036206;XM_005408685;XM_013506832;XM_013506833 XP_005408742;XP_013362286;XP_013362287 MODEL 9043618 ncrna LOC102003615 uncharacterized LOC102003615 NW_004955405 22571094 22618074 - 102003615 AGCD01005096;AGCD01005097;GBDF01187374;XR_001235464;XR_001235465 MODEL 8887629 protein-coding Tbc1d12 TBC1 domain family member 12 ASSOCIATED WITH cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN endosome (ortholog) NW_004955507 887898 990885 + 102028561 AGCD01065489;AGCD01065490;AGCD01065491;AGCD01065492;AGCD01065493;AGCD01065494;AGCD01065495;AGCD01065496;AGCD01065497;AGCD01065498;GBCE01013692;GBDI01311819;XM_013506205 XP_013361659 MODEL 8806967 protein-coding Impa1 inositol monophosphatase 1 ENCODES a protein that exhibits fructose-1-phosphatase activity (ortholog); glucose-1-phosphatase activity (ortholog); glucose-6-phosphatase activity (ortholog); INVOLVED IN phosphate-containing compound metabolic process (ortholog); phosphatidylinositol biosynthetic process (ortholog); signal transduction (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 59 (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) NW_004955417 14114 40128 - 102023696 AGCD01017781;AGCD01017782;AGCD01017783;AGCD01017784;GBCQ01072950;XM_005381716;XM_013512813;XM_013512814 XP_005381773;XP_013368267;XP_013368268 MODEL 8962711 ncrna LOC102013107 uncharacterized LOC102013107 NW_004955429 13692856 13696410 + 102013107 AGCD01028762;GBDF01283174;XR_261329 MODEL 8986507 pseudo LOC102019339 60S acidic ribosomal protein P1 pseudogene NW_004955578 1064468 1064879 - 102019339 AGCD01075508;XM_005414072;XM_005414073 MODEL 8786271 protein-coding Eaf1 ELL associated factor 1 ENCODES a protein that exhibits transcription elongation factor activity (ortholog); INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear body (ortholog); nuclear speck (ortholog); transcription elongation factor complex (ortholog) NW_004955430 1933290 1946900 + 102011466 AGCD01029143;GBDF01053689;XM_005387303 XP_005387360 MODEL 8717913 protein-coding Tecr trans-2,3-enoyl-CoA reductase ENCODES a protein that exhibits very-long-chain enoyl-CoA reductase activity (ortholog); INVOLVED IN fatty acid elongation (ortholog); sphingolipid metabolic process (ortholog); very long-chain fatty acid biosynthetic process (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 14 (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955415 33112098 33138810 + 102017231 AGCD01016751;AGCD01016752;GBDF01043421;XM_005381105 XP_005381162 MODEL 730469577 snorna SNORA1 Small nucleolar RNA SNORA1 9010498 protein-coding LOC102016193 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase-like NW_004955435 22559143 22594210 + 102016193 AGCD01033513;GBCQ01030451;XM_005389081;XM_005389082;XM_005389083;XM_005389084 XP_005389138;XP_005389139;XP_005389140;XP_005389141 MODEL 9049960 pseudo LOC102018931 histone H2B 7-like NW_004955483 868739 870866 - 102018931 AGCD01057634 MODEL 8780887 protein-coding Lmod2 leiomodin 2 ENCODES a protein that exhibits actin binding (ortholog); actin monomer binding (ortholog); tropomyosin binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); actin nucleation (ortholog); positive regulation of actin filament polymerization (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); dilated cardiomyopathy 2G (ortholog); genetic disease (ortholog); FOUND IN actin filament (ortholog); cardiac myofibril (ortholog); M band (ortholog) NW_004955479 5143430 5151096 + 102015197 AGCD01056340;GBCB01034433;XM_005402335 XP_005402392 MODEL 8997466 protein-coding Lum lumican ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN cartilage development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transforming growth factor beta1 production (ortholog); ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); carotid artery disease (ortholog); cholangiocarcinoma (ortholog); FOUND IN extracellular matrix (ortholog); fibrillar collagen trimer (ortholog) NW_004955405 28299966 28307982 - 102019658 AGCD01005234;GBCE01001209;XM_005374449 XP_005374506 MODEL 8943569 protein-coding D2hgdh D-2-hydroxyglutarate dehydrogenase ENCODES a protein that exhibits (R)-2-hydroxyglutarate dehydrogenase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN lactate metabolic process (ortholog); malate metabolic process (ortholog); protein destabilization (ortholog); ASSOCIATED WITH 2-hydroxyglutaric aciduria (ortholog); amino acid metabolic disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN mitochondrion (ortholog) NW_004955542 99379 130447 - 102003906 AGCD01071456;AGCD01071457;GBCE01077173;XM_005411112;XM_005411114;XM_013508084;XM_013508085;XM_013508086;XR_001232164 XP_005411169;XP_005411171;XP_013363538;XP_013363539;XP_013363540 MODEL 8857539 protein-coding LOC102008036 myelin P2 protein NW_004955444 162419 167955 + 102008036 AGCD01038653;GBBH01135207;XM_005392055 XP_005392112 MODEL 8979945 protein-coding Yipf6 Yip1 domain family member 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN intestinal epithelial cell development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN cis-Golgi network (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); endoplasmic reticulum (ortholog) NW_004955475 8085017 8101624 + 102013714 AGCD01055030;GBDF01158849;XM_005401586;XM_013502880 XP_005401643;XP_013358334 MODEL 8990182 protein-coding Syt1 synaptotagmin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion sensor activity (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN calcium activated phospholipid scrambling (ortholog); calcium ion-regulated exocytosis of neurotransmitter (ortholog); calcium-dependent activation of synaptic vesicle fusion (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH absence epilepsy (ortholog); Arachnodactyly (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dense core granule (ortholog) NW_004955405 17840012 18372156 + 102018357 AGCD01005009;AGCD01005010;AGCD01005011;AGCD01005012;AGCD01005013;AGCD01005014;AGCD01005015;GBBH01016778;XM_005374356;XM_005374357;XM_005374358;XM_005374359 XP_005374413;XP_005374414;XP_005374415;XP_005374416 MODEL 8969211 pseudo LOC102003945 histone deacetylase 2-like NW_004955455 3394770 3415325 + 102003945 AGCD01045624;AGCD01045625;AGCD01045626 MODEL 39133412 snrna U6 U6 spliceosomal RNA 39132971 snrna U1 U1 spliceosomal RNA 8871145 pseudo LOC102005391 olfactory receptor 9A4-like NW_004955494 1701718 1710311 - 102005391 AGCD01061420 MODEL 8894331 protein-coding Sdcbp syndecan binding protein ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); ephrin receptor binding (ortholog); frizzled binding (ortholog); INVOLVED IN negative regulation of receptor internalization (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell growth (ortholog); PARTICIPATES IN interleukin-5 signaling pathway; syndecan signaling pathway; ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); lymphoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955454 17093930 17113491 + 102016345 AGCD01045545;GBDF01080642;XM_013520111;XM_013520112 XP_013375565;XP_013375566 MODEL 8768107 protein-coding Rabgap1 RAB GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN regulation of cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autistic disorder (ortholog); Bone Fractures (ortholog); FOUND IN cytosol (ortholog) NW_004955419 4869799 5031430 - 102028752 AGCD01019777;AGCD01019778;AGCD01019779;AGCD01019780;GBDF01126192;XM_005382507;XM_005382508;XM_005382509;XM_005382510;XM_013513144;XM_013513145;XM_013513146 XP_005382564;XP_005382565;XP_005382566;XP_005382567;XP_013368598;XP_013368599;XP_013368600 MODEL 8771979 protein-coding LOC102022214 netrin-G2 NW_004955513 1701358 1708547 + 102022214 AGCD01066860;GBCB01097797;GBDK01407709;XM_013506742 XP_013362196 MODEL 8843061 protein-coding Brip1 BRCA1 interacting DNA helicase 1 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); chromatin binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to hypoxia (ortholog); cellular response to vitamin (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN BRCA1-B complex (ortholog); cytoplasm (ortholog); nuclear membrane (ortholog) NW_004955451 2705834 2820610 - 102010854 AGCD01043022;AGCD01043023;GBDK01359826;XM_013519414 XP_013374868 MODEL 8707955 protein-coding Flt3lg fms related receptor tyrosine kinase 3 ligand ENCODES a protein that exhibits identical protein binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN B cell differentiation (ortholog); dendritic cell differentiation (ortholog); embryonic hemopoiesis (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); colon carcinoma (ortholog); Fanconi anemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) NW_004955559 1364056 1371245 - 102014503 AGCD01073641;GBBH01091697;XM_013509008;XM_013509009;XM_013509010;XM_013509011;XM_013509012;XM_013509013;XM_013509014;XM_013509015;XM_013509016;XM_013509017 XP_013364462;XP_013364463;XP_013364464;XP_013364465;XP_013364466;XP_013364467;XP_013364468;XP_013364469;XP_013364470;XP_013364471 MODEL 39133075 snrna U6 U6 spliceosomal RNA 9039915 protein-coding Dnajb4 DnaJ heat shock protein family (Hsp40) member B4 ENCODES a protein that exhibits ATPase activator activity (ortholog); protein-folding chaperone binding (ortholog); ASSOCIATED WITH congenital myopathy 21 (ortholog); distal myopathy (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955423 15212579 15245538 - 102017031 AGCD01023799;AGCD01023800;GBDJ01050466;XM_005385208;XM_005385209;XM_005385210;XM_005385211;XM_005385212;XM_013514427 XP_005385265;XP_005385266;XP_005385267;XP_005385268;XP_005385269;XP_013369881 MODEL 9028927 protein-coding Hacd1 3-hydroxyacyl-CoA dehydratase 1 ENCODES a protein that exhibits 3-hydroxyacyl-CoA dehydratase activity (ortholog); enzyme binding (ortholog); hydroxyapatite binding (ortholog); INVOLVED IN cementum mineralization (ortholog); fatty acid elongation (ortholog); myotube differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cholangiocarcinoma (ortholog); Congenital Myopathy 11 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955429 10394046 10406945 + 102015554 AGCD01028670;GBDJ01385655;GBDK01397816;XM_013515558 XP_013371012 MODEL 9022389 ncrna LOC102023271 uncharacterized LOC102023271 NW_004955491 4998172 5001404 - 102023271 AGCD01060466;GBDF01028093;XR_001231219 MODEL 8760855 protein-coding Gfod2 Gfo/Idh/MocA-like oxidoreductase domain containing 2 INVOLVED IN extracellular matrix organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955484 8963297 9009791 + 102024571 AGCD01058401;AGCD01058402;AGCD01058403;GBDF01080362;XM_005403626;XM_013503954 XP_005403683;XP_013359408 MODEL 10314259 ncrna LOC106147385 uncharacterized LOC106147385 NW_004955550 1779648 1782790 - 106147385 AGCD01072588;GBDF01159446;XR_001232264 MODEL 39132702 snrna U6 U6 spliceosomal RNA 9013620 protein-coding Smad4 SMAD family member 4 ENCODES a protein that exhibits chromatin binding (ortholog); collagen binding (ortholog); DNA binding (ortholog); INVOLVED IN adrenal gland development (ortholog); anterior/posterior pattern specification (ortholog); atrioventricular canal development (ortholog); PARTICIPATES IN altered transforming growth factor-beta Smad dependent signaling pathway; Bone morphogenetic proteins signaling pathway; colorectal cancer pathway; ASSOCIATED WITH Acro-Osteolysis (ortholog); acute myeloid leukemia (ortholog); aortic disease (ortholog); FOUND IN activin responsive factor complex (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955402 35956080 36001746 + 102023215 AGCD01000909;AGCD01000910;GBCB01040153;XM_013510741;XM_013510745;XR_001232810 XP_013366195;XP_013366199 MODEL 9063252 protein-coding Slc12a6 solute carrier family 12 member 6 ENCODES a protein that exhibits potassium:chloride symporter activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cell volume homeostasis (ortholog); cellular hypotonic salinity response (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); agenesis of the corpus callosum with peripheral neuropathy (ortholog); asthma (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) NW_004955416 277215 375812 + 102019387 AGCD01016792;AGCD01016793;AGCD01016794;AGCD01016795;AGCD01016796;AGCD01016797;AGCD01016798;GBDF01049182;XM_005381156 XP_005381213 MODEL 8753259 protein-coding Ubd ubiquitin like modifier D ENCODES a protein that exhibits proteasome binding (ortholog); INVOLVED IN aggresome assembly (ortholog); myeloid dendritic cell differentiation (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH Animal Hepatitis (ortholog); Breast Neoplasms (ortholog); celiac disease (ortholog); FOUND IN aggresome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) NW_004955583 29438 29873 - 102027921 AGCD01075791;XM_013509775 XP_013365229 MODEL 8719786 protein-coding Ttc8 tetratricopeptide repeat domain 8 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN axon guidance (ortholog); camera-type eye photoreceptor cell differentiation (ortholog); cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 8 (ortholog); FOUND IN BBSome (ortholog); centrosome (ortholog); ciliary basal body (ortholog) NW_004955438 11410196 11466044 + 102008459 AGCD01035237;AGCD01035238;AGCD01035239;GBDF01187164;XM_005390265 XP_005390322 MODEL 8774383 protein-coding Gmpr2 guanosine monophosphate reductase 2 ENCODES a protein that exhibits GMP reductase activity (ortholog); INVOLVED IN GMP metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); Breast Cancer, Familial (ortholog) NW_004955409 36166129 36173247 - 102005780 AGCD01010450;GBDJ01131488;XM_005377024;XM_005377025;XM_013510403 XP_005377081;XP_005377082;XP_013365857 MODEL 9005667 pseudo LOC102018113 periphilin-1 pseudogene NW_004955503 1977626 1979433 + 102018113 AGCD01064593;XM_005406925 MODEL 8791414 pseudo LOC102021516 chromodomain Y-like protein pseudogene NW_004955405 15378726 15379619 + 102021516 AGCD01004944 MODEL 9036679 pseudo LOC102003946 acyl-CoA-binding domain-containing protein 6 pseudogene NW_004955407 13736680 13744398 - 102003946 AGCD01007152 MODEL 8822605 pseudo LOC102012739 olfactory receptor 6C74-like NW_004955458 2426969 2427904 - 102012739 AGCD01047233 MODEL 8732752 protein-coding LOC102004691 leucine-rich repeat-containing protein 51 NW_004955414 19236475 19252002 - 102004691 AGCD01015308;GBBH01154964;XM_005380016;XM_005380017;XM_005380018;XM_013511820;XM_013511821;XM_013511822;XM_013511823 XP_005380073;XP_005380074;XP_005380075;XP_013367274;XP_013367275;XP_013367276;XP_013367277 MODEL 8851968 protein-coding Nt5dc2 5'-nucleotidase domain containing 2 INVOLVED IN negative regulation of dopamine biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955430 2517943 2526423 - 102018627 AGCD01029167;GBBH01063420;GBBH01063422;XM_005387325 XP_005387382 MODEL 8730209 pseudo LOC102013556 calmodulin-like NW_004955442 9087589 9088397 + 102013556 AGCD01037662 MODEL 8989535 protein-coding Sbk3 SH3 domain binding kinase family member 3 NW_004955567 774343 778097 + 102019542 AGCD01074432;GBDI01036146;XM_005413308 XP_005413365 MODEL 10349395 ncrna LOC106149606 uncharacterized LOC106149606 NW_004955405 39364427 39365934 + 106149606 AGCD01005499;XR_001235912 MODEL 39132114 snrna U6 U6 spliceosomal RNA 8726919 ncrna LOC102020390 uncharacterized LOC102020390 NW_004955445 12888527 12928600 + 102020390 AGCD01039764;AGCD01039765;GBDF01222119;XR_262332 MODEL 8887177 protein-coding Tecrl trans-2,3-enoyl-CoA reductase like ASSOCIATED WITH catecholaminergic polymorphic ventricular tachycardia (ortholog); catecholaminergic polymorphic ventricular tachycardia 3 (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955447 8075470 8189509 + 102017076 AGCD01040829;AGCD01040830;AGCD01040831;AGCD01040832;AGCD01040833;AGCD01040834;AGCD01040835;GBDK01203482;XM_005392848 XP_005392905 MODEL 9003116 pseudo LOC102016195 heterogeneous nuclear ribonucleoprotein C pseudogene NW_004955532 2895443 2896483 + 102016195 AGCD01070258 MODEL 39133076 snrna U6 U6 spliceosomal RNA 8815055 protein-coding Lmod3 leiomodin 3 ENCODES a protein that exhibits actin monomer binding (ortholog); tropomyosin binding (ortholog); INVOLVED IN actin nucleation (ortholog); positive regulation of skeletal muscle fiber development (ortholog); skeletal muscle fiber development (ortholog); ASSOCIATED WITH genetic disease (ortholog); nemaline myopathy 10 (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); M band (ortholog) NW_004955421 18728993 18744326 + 102011670 AGCD01022052;AGCD01022053;GBCB01006122;XM_005383807;XM_005383808 XP_005383864;XP_005383865 MODEL 8887806 protein-coding LOC102003616 spidroin-1-like NW_004955405 39280354 39282100 - 102003616 AGCD01005498;XM_013519522 XP_013374976 MODEL 8793608 protein-coding Gfpt1 glutamine--fructose-6-phosphate transaminase 1 ENCODES a protein that exhibits amino acid binding (ortholog); carbohydrate binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); circadian regulation of gene expression (ortholog); D-glucosamine biosynthetic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; amino sugar metabolic pathway; french type sialuria pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955424 15692088 15739894 + 102025483 AGCD01024723;AGCD01024724;AGCD01024725;GBDF01267390;XM_013514590 XP_013370044 MODEL 8737802 protein-coding Syt10 synaptotagmin 10 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); positive regulation of calcium ion-dependent exocytosis (ortholog); presynaptic dense core vesicle exocytosis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN exocytic vesicle (ortholog); glutamatergic synapse (ortholog); presynapse (ortholog) NW_004955505 2392086 2449528 + 102026450 AGCD01064994;AGCD01064995;AGCD01064996;GBDJ01401455;XM_005407171 XP_005407228 MODEL 8960257 ncrna LOC102025418 uncharacterized LOC102025418 NW_004955450 8582257 8594051 + 102025418 AGCD01042571;AGCD01042572;GBDF01124408;XR_262540 MODEL 8976223 protein-coding Impa2 inositol monophosphatase 2 ENCODES a protein that exhibits glucose-1-phosphatase activity (ortholog); glycerol-2-phosphatase activity (ortholog); inositol monophosphate 1-phosphatase activity (ortholog); INVOLVED IN response to lithium ion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bipolar disorder (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog) NW_004955402 1119376 1143589 - 102015360 AGCD01000048;GBDI01175847;XM_005372574 XP_005372631 MODEL 9025380 ncrna LOC102019342 uncharacterized LOC102019342 NW_004955402 25014435 25015928 + 102019342 AGCD01000650;GBDF01055968;XR_259067 MODEL 9017220 protein-coding Smad5 SMAD family member 5 ENCODES a protein that exhibits DEAD/H-box RNA helicase binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anti-Mullerian hormone receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); bone development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cocaine-Related Disorders (ortholog); congenital heart disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955408 31183727 31228355 + 102014874 AGCD01008822;AGCD01008823;GBCE01108524;XM_013506828 XP_013362282 MODEL 8931097 ncrna LOC102009527 uncharacterized LOC102009527 NW_004955429 19955225 19971743 - 102009527 AGCD01028974;AGCD01028975;XR_001234478;XR_261368 MODEL 9011408 protein-coding Thbs4 thrombospondin 4 ENCODES a protein that exhibits calcium ion binding (ortholog); collagen binding (ortholog); fibronectin binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); endothelial cell-cell adhesion (ortholog); myoblast migration (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN basement membrane (ortholog); endoplasmic reticulum (ortholog); extracellular matrix (ortholog) NW_004955425 21072873 21117061 - 102024029 AGCD01025781;GBBH01063682;XM_005386101 XP_005386158 MODEL 730469522 snorna SNORA1 Small nucleolar RNA SNORA1 8889115 protein-coding LOC102018114 T-cell receptor-associated transmembrane adapter 1 INVOLVED IN negative regulation of receptor recycling (ortholog); negative regulation of transport (ortholog); positive regulation of calcium-mediated signaling (ortholog); ASSOCIATED WITH uterine corpus endometrial carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); plasma membrane (ortholog); T cell receptor complex (ortholog) NW_004955427 9665479 9700305 + 102018114 AGCD01027104;GBDI01087718;XM_005386363;XM_013515031;XM_013515032 XP_005386420;XP_013370485;XP_013370486 MODEL 8730296 ncrna LOC102018932 uncharacterized LOC102018932 NW_004955419 13903856 13908224 - 102018932 AGCD01020009;GBDF01187427;XR_260628 MODEL 8875960 protein-coding Lurap1 leucine rich adaptor protein 1 INVOLVED IN actomyosin structure organization (ortholog); cell migration (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); FOUND IN actomyosin (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955464 12056588 12072266 - 102022373 AGCD01050176;AGCD01050177;AGCD01050178;GBCB01074204;XM_005398684 XP_005398741 MODEL 39132690 snrna U6 U6 spliceosomal RNA 8785372 pseudo LOC102023272 olfactory receptor-like protein OLF3 NW_004955491 242552 243621 + 102023272 AGCD01060325 MODEL 8924440 protein-coding Tp53 tumor protein p53 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP-dependent DNA/DNA annealing activity (ortholog); chromatin binding (ortholog); INVOLVED IN positive regulation of outer hair cell apoptotic process; apoptotic process (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN altered p53 signaling pathway; endometrial cancer pathway; lung non-small cell carcinoma pathway; ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytoplasm (ortholog) NW_004955467 9241391 9256716 + 102005455 AGCD01051484;AGCD01051485;GBCQ01124524;XM_005399463;XM_005399464 XP_005399520;XP_005399521 MODEL 8782359 protein-coding Flt4 fms related receptor tyrosine kinase 4 ENCODES a protein that exhibits growth factor binding (ortholog); protein homodimerization activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); cellular response to vascular endothelial growth factor stimulus (ortholog); lung alveolus development (ortholog); PARTICIPATES IN altered vascular endothelial growth factor signaling pathway; altered vascular endothelial growth factor signaling pathway involving the main players; axitinib pharmacodynamics pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955408 98995 137922 + 102025873 AGCD01007908;AGCD01007909;GBCE01084871;XM_013507813 XP_013363267 MODEL 8962756 protein-coding Hacd2 3-hydroxyacyl-CoA dehydratase 2 ENCODES a protein that exhibits 3-hydroxyacyl-CoA dehydratase activity (ortholog); enzyme binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN fatty acid elongation (ortholog); sphingolipid biosynthetic process (ortholog); very long-chain fatty acid biosynthetic process (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); lung cancer (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955427 22642509 22733170 - 102015132 AGCD01027472;AGCD01027473;AGCD01027474;GBBH01227712;XM_005386528 XP_005386585 MODEL 8746584 protein-coding Fabp6 fatty acid binding protein 6 ENCODES a protein that exhibits fatty acid binding (ortholog); INVOLVED IN steroid metabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); urinary bladder cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955408 14102748 14111487 + 102024092 AGCD01008384;GBDF01007588;XM_005376256;XM_005376257 XP_005376313;XP_005376314 MODEL 8859445 protein-coding LOC102013110 membrane-spanning 4-domains subfamily A member 12-like NW_004955511 4782390 4792412 - 102013110 AGCD01066526;XM_013506411 XP_013361865 MODEL 39132973 snrna U1 U1 spliceosomal RNA 8812304 protein-coding LOC102021518 dimethylaniline monooxygenase [N-oxide-forming] 3 NW_004955406 11764264 11781996 + 102021518 AGCD01005895;AGCD01005896;GBBH01063317;XM_005374830 XP_005374887 MODEL 8810362 protein-coding Ldaf1 lipid droplet assembly factor 1 INVOLVED IN lipid droplet formation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) NW_004955493 368399 386651 + 102006040 AGCD01060848;AGCD01060849;AGCD01060850;GBDF01001588;XM_005405049 XP_005405106 MODEL 8949963 protein-coding Kifc2 kinesin family member C2 ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); esophageal cancer (ortholog) NW_004955454 3087168 3093916 + 102007506 AGCD01045051;GBBH01163884;XM_005395892;XM_005395893 XP_005395949;XP_005395950 MODEL 9028873 protein-coding LOC102012740 interferon-inducible GTPase 1-like NW_004955408 2198852 2276939 - 102012740 AGCD01007998;AGCD01007999;AGCD01008000;AGCD01008001;AGCD01008002;AGCD01008003;GBDK01009851;XM_005376044;XM_013508115 XP_005376101;XP_013363569 MODEL 9066902 protein-coding Nt5dc3 5'-nucleotidase domain containing 3 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); signaling receptor complex (ortholog) NW_004955405 38539512 38560450 - 102007402 AGCD01005480;GBBH01103028;XM_005374577 XP_005374634 MODEL 8773035 ncrna LOC102008038 uncharacterized LOC102008038 NW_004955445 9004503 9006160 - 102008038 AGCD01039621;GBBH01065534;XR_262322 MODEL 10237266 ncrna LOC106147386 uncharacterized LOC106147386 NW_004955550 1942507 1946981 - 106147386 AGCD01072599;GBDI01011574;XR_001232267 MODEL 39132703 snrna U6 U6 spliceosomal RNA 8959169 protein-coding Daam1 dishevelled associated activator of morphogenesis 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN presynaptic actin cytoskeleton organization (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) NW_004955466 12954557 13129483 + 102006889 AGCD01051147;AGCD01051148;AGCD01051149;AGCD01051150;GBDF01188476;XM_005399225;XM_005399226;XM_013521989;XM_013521990;XM_013521991 XP_005399282;XP_005399283;XP_013377443;XP_013377444;XP_013377445 MODEL 8940072 protein-coding Yipf7 Yip1 domain family member 7 INVOLVED IN Golgi organization (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); uterine carcinosarcoma (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) NW_004955443 3405515 3427774 + 102006292 AGCD01038192;GBCB01001162;XM_013518067;XM_013518068 XP_013373521;XP_013373522 MODEL 8959863 protein-coding Slc26a10p Solute carrier family 26 member 10 NW_004955458 5343188 5352194 + 102009151 AGCD01047477;AGCD01047478;AGCD01047479;AGCD01047480;GBDI01004613;XM_005397408;XM_013520907;XM_013520908 XP_005397465;XP_013376361;XP_013376362 MODEL 8770265 pseudo LOC102005392 G patch domain-containing protein 11-like NW_004955422 28803634 28805092 + 102005392 AGCD01023370 MODEL 8762875 protein-coding Mc3r melanocortin 3 receptor ENCODES a protein that exhibits corticotropin receptor activity (ortholog); melanocortin receptor activity (ortholog); melanocyte-stimulating hormone receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; melanocortin system pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); obesity (ortholog) NW_004955445 2977026 2979375 - 102012255 AGCD01039373;XM_005392278 XP_005392335 MODEL 8935663 protein-coding Eaf2 ELL associated factor 2 ENCODES a protein that exhibits transcription elongation factor activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of epithelial cell proliferation involved in prostate gland development (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH B-cell lymphoma (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); transcription elongation factor complex (ortholog) NW_004955427 21171900 21204138 + 102006690 AGCD01027432;AGCD01027433;AGCD01027434;GBCE01143382;XM_005386499 XP_005386556 MODEL 9012668 protein-coding Ttc9 tetratricopeptide repeat domain 9 INVOLVED IN bone development (ortholog); ASSOCIATED WITH lung cancer (ortholog); opiate dependence (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955523 4438674 4471049 - 102017694 AGCD01068646;AGCD01068647;GBDF01224632;XM_013507122 XP_013362576 MODEL 8904367 protein-coding Slc12a7 solute carrier family 12 member 7 ENCODES a protein that exhibits potassium:chloride symporter activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); cellular response to glucose stimulus (ortholog); potassium ion import across plasma membrane (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); cervical cancer (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955504 529183 589728 - 102030334 AGCD01064822;AGCD01064823;GBBH01060650;XM_005407034;XM_005407035;XM_005407037;XM_013505890 XP_005407091;XP_005407092;XP_005407094;XP_013361344 MODEL 8721846 protein-coding Sdcbp2 syndecan binding protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cell population proliferation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) NW_004955596 531741 555710 - 102014305 AGCD01076521;AGCD01076522;GBBH01180478;XM_005414702 XP_005414759 MODEL 8794679 protein-coding Lmtk1 lemur tail kinase 1 ENCODES a protein that exhibits protein tyrosine kinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); brain development (ortholog); neuron apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) NW_004955506 1828326 1868302 + 102012563 AGCD01065275;AGCD01065276;AGCD01065277;GBBH01130375;XM_005407305;XM_005407307;XM_005407308;XM_005407310;XM_005407311;XM_013506068;XM_013506069;XM_013506070;XM_013506071 XP_005407362;XP_005407364;XP_005407365;XP_005407367;XP_005407368;XP_013361522;XP_013361523;XP_013361524;XP_013361525 MODEL 8972932 protein-coding Brix1 biogenesis of ribosomes BRX1 FOUND IN chromosome (ortholog); nucleolus (ortholog) NW_004955426 20042274 20051606 + 102005397 AGCD01026560;GBDF01054030;XM_005386187 XP_005386244 MODEL 8714451 pseudo LOC102003947 cytochrome c oxidase subunit 7A2, mitochondrial pseudogene NW_004955408 862783 863268 + 102003947 AGCD01007937 MODEL 8706723 protein-coding Gmps guanosine monophosphate synthase ENCODES a protein that exhibits enzyme binding (ortholog); GMP synthase (glutamine-hydrolyzing) activity (ortholog); GMP synthase activity (ortholog); INVOLVED IN GMP biosynthetic process (ortholog); GMP salvage (ortholog); response to L-cysteine (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; ASSOCIATED WITH acute myelomonocytic leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog) NW_004955448 6931891 6984662 + 102017178 AGCD01041397;AGCD01041398;GBDF01007582;XM_005393072;XM_005393073 XP_005393129;XP_005393130 MODEL 8750039 protein-coding Gfpt2 glutamine-fructose-6-phosphate transaminase 2 ENCODES a protein that exhibits L-glutamine:D-fructose-6-phosphate transaminase (isomerizing) activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); fructose 6-phosphate metabolic process (ortholog); UDP-N-acetylglucosamine biosynthetic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); Diabetic Nephropathies (ortholog) NW_004955408 330112 372413 + 102027271 AGCD01007915;AGCD01007916;AGCD01007917;GBDF01113230;XM_005376003 XP_005376060 MODEL 8968359 ncrna LOC102019343 uncharacterized LOC102019343 NW_004955450 1860097 1867224 + 102019343 AGCD01042371;GBDF01194629;XR_262521 MODEL 8989934 protein-coding Impact impact RWD domain protein ENCODES a protein that exhibits actin binding (ortholog); protein sequestering activity (ortholog); ribosome binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); GCN2-mediated signaling (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog) NW_004955402 12752748 12781238 + 102010754 AGCD01000403;GBCB01110995;XM_005372721;XM_013504956 XP_005372778;XP_013360410 MODEL 730469442 snorna SNORA1 Small nucleolar RNA SNORA1 8834478 protein-coding LOC102009529 olfactory receptor 5A2-like NW_004955511 3917910 3918862 - 102009529 AGCD01066481;XM_013506389 XP_013361843 MODEL 39132115 snrna U6 U6 spliceosomal RNA 9020125 protein-coding Sbno1 strawberry notch homolog 1 INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of MAPK cascade (ortholog); negative regulation of neuroinflammatory response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nucleus (ortholog) NW_004955482 5519165 5571416 + 102018729 AGCD01057341;AGCD01057342;GBBH01177306;XM_005403039;XM_005403043;XM_005403045;XM_005403047;XM_013503552;XM_013503553;XM_013503554 XP_005403096;XP_005403100;XP_005403102;XP_005403104;XP_013359006;XP_013359007;XP_013359008 MODEL 8932275 protein-coding Tbc1d13 TBC1 domain family member 13 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); regulation of cilium assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) NW_004955570 1180154 1192525 + 102009333 AGCD01074797;GBBH01117357;GBCQ01033138;XM_005413587 XP_005413644 MODEL 8955361 pseudo LOC102018115 eukaryotic translation initiation factor 2 subunit 2 pseudogene NW_004955427 10286735 10287698 + 102018115 AGCD01027142 MODEL 8943247 protein-coding Lurap1l leucine rich adaptor protein 1 like ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog) NW_004955434 15995549 16035055 + 102013204 AGCD01032506;AGCD01032507;AGCD01032508;AGCD01032509;GBDK01046937;XM_005388690 XP_005388747 MODEL 8763680 protein-coding Tecta tectorin alpha ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 12 (ortholog); autosomal recessive nonsyndromic deafness 21 (ortholog); Hearing Loss (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955412 22062618 22132037 + 102014030 AGCD01013033;GBBH01101121;XM_005378359 XP_005378416 MODEL 39133077 snrna U6 U6 spliceosomal RNA 8888677 protein-coding LOC102003619 tubulin alpha chain-like NW_004955406 36709889 36828026 + 102003619 AGCD01006562;AGCD01006563;AGCD01006564;AGCD01006565;AGCD01006566;AGCD01006567;GBCQ01012688;XM_005375474 XP_005375531 MODEL 8794019 protein-coding Rabgap1l RAB GTPase activating protein 1 like ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN regulation of cilium assembly (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cilium (ortholog); early endosome (ortholog); Golgi apparatus (ortholog) NW_004955406 14216549 14815052 + 102011730 AGCD01005960;AGCD01005961;AGCD01005962;AGCD01005963;AGCD01005964;AGCD01005965;AGCD01005966;AGCD01005967;AGCD01005968;AGCD01005969;AGCD01005970;AGCD01005971;GBDF01016451;XM_005374884;XM_005374886;XM_005374887;XM_005374888;XM_005374889;XM_005374890;XM_005374891;XM_005374892;XM_013520892;XM_013520898 XP_005374941;XP_005374943;XP_005374944;XP_005374945;XP_005374946;XP_005374947;XP_005374948;XP_005374949;XP_013376346;XP_013376352 MODEL 8957675 protein-coding LOC102025421 olfactory receptor 11L1-like NW_004955613 215096 234005 - 102025421 AGCD01077204;AGCD01077205;GBDJ01281862;XM_005414967;XR_001232580 XP_005415024 MODEL 8753767 protein-coding Fabp7 fatty acid binding protein 7 INVOLVED IN cell proliferation in forebrain (ortholog); epithelial cell proliferation (ortholog); neurogenesis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); epilepsy (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell body (ortholog); cell periphery (ortholog); cell-cell junction (ortholog) NW_004955436 4642584 4646172 + 102026039 AGCD01033670;GBCQ01037964;XM_005389151 XP_005389208 MODEL 8735794 protein-coding Dnajb5 DnaJ heat shock protein family (Hsp40) member B5 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); response to unfolded protein (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); lung cancer (ortholog); neuropathy (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955472 1168568 1177849 - 102016468 AGCD01053378;GBBH01050211;GBCB01001318;XM_013523026 XP_013378480 MODEL 8885401 protein-coding LOC102004692 olfactory receptor 51I1 NW_004955414 21341220 21342158 - 102004692 AGCD01015415;XM_005380084 XP_005380141 MODEL 8904575 protein-coding Syt11 synaptotagmin 11 ENCODES a protein that exhibits beta-tubulin binding (ortholog); identical protein binding (ortholog); SNARE binding (ortholog); INVOLVED IN autophagy (ortholog); calcium ion regulated lysosome exocytosis (ortholog); establishment of vesicle localization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); colon adenocarcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN axon (ortholog); cell body (ortholog); cytoplasm (ortholog) NW_004955545 2054720 2074526 + 102011049 AGCD01071882;GBCE01040966;XM_005411617;XM_013508238;XM_013508239;XM_013508240 XP_005411674;XP_013363692;XP_013363693;XP_013363694 MODEL 730469581 misc_rna SMAD5-AS1_2 SMAD5 antisense RNA 1 conserved region 2 8830860 pseudo LOC102021519 purine nucleoside phosphorylase pseudogene NW_004955406 14154246 14154836 - 102021519 AGCD01005958 MODEL 10344693 ncrna LOC106149607 uncharacterized LOC106149607 NW_004955450 10328348 10336544 - 106149607 AGCD01042613;GBDK01104365;XR_001235910;XR_001235911 MODEL 8876513 protein-coding Them4 thioesterase superfamily member 4 ENCODES a protein that exhibits long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); regulation of mitochondrial membrane permeability involved in apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial intermembrane space (ortholog) NW_004955589 517489 545779 + 102011160 AGCD01076175;GBDF01122861;XM_005414537 XP_005414594 MODEL 8948804 pseudo LOC102016196 ras GTPase-activating protein-binding protein 1 pseudogene NW_004955437 18354771 18356910 - 102016196 AGCD01034790;XR_261892 MODEL 8842610 protein-coding LOC102018934 neutrophil gelatinase-associated lipocalin-like NW_004955419 346746 382267 - 102018934 AGCD01019577;AGCD01019578;AGCD01019579;AGCD01019580;XM_013513094 XP_013368548 MODEL 8723385 pseudo LOC102012742 gamma-aminobutyric acid receptor-associated protein pseudogene NW_004955409 17452914 17453267 - 102012742 AGCD01009784 MODEL 8840915 protein-coding Ldah lipid droplet associated hydrolase ENCODES a protein that exhibits sterol ester esterase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); intracellular triglyceride homeostasis (ortholog); lipid droplet fusion (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); lipid droplet (ortholog) NW_004955469 3161691 3277018 - 102017861 AGCD01052292;AGCD01052293;AGCD01052294;AGCD01052295;AGCD01052296;GBBH01115224;XM_005400355;XM_005400356;XM_005400357;XM_013522654 XP_005400412;XP_005400413;XP_005400414;XP_013378108 MODEL 9044125 protein-coding Ube2a ubiquitin conjugating enzyme E2 A ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); chromatin remodeling (ortholog); DNA repair (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); asthma (ortholog); autistic disorder (ortholog); FOUND IN chromatin (ortholog); HULC complex (ortholog); late endosome (ortholog) NW_004955534 411602 485964 - 102022539 AGCD01070450;AGCD01070451;AGCD01070452;AGCD01070453;AGCD01070454;AGCD01070455;GBBH01164998;GBCB01003717;XM_005410478 XP_005410535 MODEL 39132691 snrna U6 U6 spliceosomal RNA 39132704 snrna U6 U6 spliceosomal RNA 10298473 ncrna LOC106147387 uncharacterized LOC106147387 NW_004955408 6144482 6147477 + 106147387 AGCD01008164;GBBH01127905;XR_001232268 MODEL 8870671 pseudo LOC102022215 beclin 1-associated autophagy-related key regulator pseudogene NW_004955432 3101480 3103277 + 102022215 AGCD01030628 MODEL 8834285 protein-coding Yjefn3 YjeF N-terminal domain containing 3 ASSOCIATED WITH cervical cancer (ortholog); melanoma (ortholog); urinary bladder cancer (ortholog) NW_004955524 2421350 2426509 - 102005628 AGCD01068817;GBDJ01273409;XM_013507296 XP_013362750 MODEL 9052841 pseudo LOC102013112 ATP synthase F(0) complex subunit B1, mitochondrial pseudogene NW_004955514 556735 557501 + 102013112 AGCD01067014 MODEL 9001392 protein-coding Tp53bp1 tumor protein p53 binding protein 1 ENCODES a protein that exhibits damaged DNA binding (ortholog); histone H4K20me methyltransferase activity (ortholog); histone H4K20me2 reader activity (ortholog); INVOLVED IN cellular response to X-ray (ortholog); DNA damage response (ortholog); DNA repair (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) NW_004955416 9962736 10035433 - 102005138 AGCD01017100;AGCD01017101;AGCD01017102;AGCD01017103;GBBH01227232;XM_005381379;XM_005381380;XM_005381381;XM_005381382;XM_005381383 XP_005381436;XP_005381437;XP_005381438;XP_005381439;XP_005381440 MODEL 9000739 protein-coding Hacd3 3-hydroxyacyl-CoA dehydratase 3 ENCODES a protein that exhibits enzyme binding (ortholog); very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase activity (ortholog); INVOLVED IN fatty acid elongation (ortholog); JNK cascade (ortholog); negative regulation of intracellular signal transduction (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); nonpapillary renal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955450 9923560 9947519 - 102006732 AGCD01042600;GBCQ01037300;XM_005393882 XP_005393939 MODEL 8718562 ncrna LOC102013560 uncharacterized LOC102013560 NW_004955443 13036898 13044656 - 102013560 AGCD01038459;GBDF01022385;XR_262205 MODEL 8764814 protein-coding LOC102005393 long-chain-fatty-acid--CoA ligase ACSBG2-like NW_004955495 3360519 3386816 - 102005393 AGCD01061850;AGCD01061851;AGCD01061852;GBDF01010958;GBDF01197189;XM_013505360 XP_013360814 MODEL 8995596 protein-coding Eapp E2F associated phosphoprotein INVOLVED IN negative regulation of transcription elongation by RNA polymerase II (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung cancer (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955409 26383618 26411738 + 102007089 AGCD01010180;GBDF01004579;XM_005376941 XP_005376998 MODEL 8937963 protein-coding Tectb tectorin beta ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); testicular germ cell cancer (ortholog); Testicular Germ Cell Tumor (ortholog); FOUND IN extracellular matrix (ortholog) NW_004955431 17413841 17425192 + 102028118 AGCD01030408;XM_005387760 XP_005387817 MODEL 8875849 ncrna LOC102020392 uncharacterized LOC102020392 NW_004955447 1208190 1217812 + 102020392 AGCD01040499;AGCD01040500;GBDK01306325;XR_262403 MODEL 8909439 pseudo LOC102003949 uncharacterized protein C9orf85 homolog pseudogene NW_004955409 16860918 16865775 + 102003949 AGCD01009746 MODEL 10135390 protein-coding Brk1 BRICK1 subunit of SCAR/WAVE actin nucleating complex ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell motility (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN lamellipodium (ortholog); SCAR complex (ortholog) NW_004955561 1545921 1554423 + 106147451 AGCD01073856;GBDF01010733;XM_013509100 XP_013364554 MODEL 8993271 protein-coding LOC102006869 zinc finger protein 14-like NW_004955453 6825362 6828549 + 102006869 AGCD01044731;XM_005395440 XP_005395497 MODEL 8868228 pseudo LOC102023274 carnosine N-methyltransferase-like NW_004955422 21499510 21502368 - 102023274 AGCD01023122;AGCD01023123 MODEL 39132116 snrna U6 U6 spliceosomal RNA 39132975 snrna U1 U1 spliceosomal RNA 8977902 protein-coding Nt5e 5'-nucleotidase ecto ENCODES a protein that exhibits 5'-deoxynucleotidase activity (ortholog); 5'-nucleotidase activity (ortholog); ferrous iron binding (ortholog); INVOLVED IN adenosine biosynthetic process (ortholog); adenosine metabolic process (ortholog); ADP catabolic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Brain Injuries (ortholog); Disease Progression (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) NW_004955411 12891236 12946324 + 102019676 AGCD01011859;AGCD01011860;AGCD01011861;GBDF01121398;XM_005377700 XP_005377757 MODEL 8897366 protein-coding LOC102018935 translation initiation factor IF-2-like NW_004955485 9778432 9781686 - 102018935 AGCD01058781;GBBH01012083;XM_005403936 XP_005403993 MODEL 8862434 protein-coding Tbc1d14 TBC1 domain family member 14 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN negative regulation of autophagy (ortholog); recycling endosome to Golgi transport (ortholog); regulation of autophagosome assembly (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN autophagosome (ortholog); Golgi apparatus (ortholog); recycling endosome (ortholog) NW_004955514 3485975 3553840 - 102016628 AGCD01067097;AGCD01067098;AGCD01067099;GBBH01092531;GBCE01045686;XM_013506762 XP_013362216 MODEL 8774005 protein-coding Flvcr1 FLVCR choline and heme transporter 1 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); heme B transmembrane transporter activity (ortholog); INVOLVED IN blood vessel development (ortholog); choline transport (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); asphyxiating thoracic dystrophy (ortholog); asthma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) NW_004955406 4673797 4702858 - 102013798 AGCD01005699;AGCD01005700;AGCD01005701;GBCE01057352;GBDI01219305;XM_013520040;XM_013520050 XP_013375494;XP_013375504 MODEL 8739645 protein-coding Mc4r melanocortin 4 receptor ENCODES a protein that exhibits corticotropin receptor activity (ortholog); hormone binding (ortholog); melanocortin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); diet induced thermogenesis (ortholog); energy reserve metabolic process (ortholog); PARTICIPATES IN altered energy homeostasis pathway; altered melanocortin system pathway; G protein mediated signaling pathway via Galphas family; ASSOCIATED WITH acne (ortholog); Acute-Phase Reaction (ortholog); alcohol dependence (ortholog); FOUND IN non-motile cilium membrane (ortholog); plasma membrane (ortholog) NW_004955402 44453973 44456689 - 102016864 AGCD01001115;KC825347;XM_005373009 AGT57765;XP_005373066 MODEL 8802067 protein-coding Luzp1 leucine zipper protein 1 ENCODES a protein that exhibits actin filament binding (ortholog); microtubule binding (ortholog); INVOLVED IN apical constriction (ortholog); artery development (ortholog); contractile ring contraction (ortholog); ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); thymoma (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); centrosome (ortholog) NW_004955452 3105827 3188762 - 102011726 AGCD01043912;AGCD01043913;AGCD01043914;GBDJ01115835;XM_005394749;XM_005394750 XP_005394806;XP_005394807 MODEL 8933731 protein-coding Slc12a8 solute carrier family 12 member 8 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955427 24137420 24284485 - 102021263 AGCD01027502;AGCD01027503;AGCD01027504;AGCD01027505;AGCD01027506;AGCD01027507;GBBH01145884;XM_005386546 XP_005386603 MODEL 8877551 protein-coding Gna11 G protein subunit alpha 11 ENCODES a protein that exhibits alkylglycerophosphoethanolamine phosphodiesterase activity (ortholog); G protein activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN action potential (ortholog); cellular response to pH (ortholog); cranial skeletal system development (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; angiotensin II signaling pathway via AT1 receptor; eicosanoid signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant hypocalcemia 2 (ortholog); CLOVES syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); heterotrimeric G-protein complex (ortholog) NW_004955495 5286891 5302631 - 102026441 AGCD01061993;GBCE01096719;GBDJ01021345;XM_005405852 XP_005405909 MODEL 8767914 protein-coding Hacd4 3-hydroxyacyl-CoA dehydratase 4 ENCODES a protein that exhibits enzyme binding (ortholog); very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase activity (ortholog); INVOLVED IN fatty acid elongation (ortholog); very long-chain fatty acid biosynthetic process (ortholog); ASSOCIATED WITH lung squamous cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) NW_004955434 23235928 23261288 - 102019426 AGCD01032699;AGCD01032700;GBDI01261104;XM_013516368;XM_013516369 XP_013371822;XP_013371823 MODEL 8773632 protein-coding Gfra1 GDNF family receptor alpha 1 ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); integrin binding (ortholog); neurotrophin receptor activity (ortholog); INVOLVED IN cell migration (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN axon (ortholog); endosome (ortholog); external side of plasma membrane (ortholog) NW_004955431 20859152 21070886 - 102021035 AGCD01030485;AGCD01030486;AGCD01030487;AGCD01030488;AGCD01030489;AGCD01030490;GBDK01005285;XM_005387842;XM_005387843;XM_005387844;XM_005387845 XP_005387899;XP_005387900;XP_005387901;XP_005387902 MODEL 8944889 protein-coding Impdh1 inosine monophosphate dehydrogenase 1 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); IMP dehydrogenase activity (ortholog); INVOLVED IN 'de novo' XMP biosynthetic process (ortholog); GMP biosynthetic process (ortholog); lymphocyte proliferation (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cone-rod dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955479 9388241 9406717 - 102026109 AGCD01056463;AGCD01056464;GBCE01009782;XM_005402371 XP_005402428 MODEL 8876928 protein-coding LOC102004693 olfactory receptor 6 NW_004955414 22664983 22665967 - 102004693 AGCD01015469;GBBH01083993;XM_013511766 XP_013367220 MODEL 9064366 protein-coding Tedc1 tubulin epsilon and delta complex 1 INVOLVED IN cytoskeleton organization (ortholog); microtubule cytoskeleton organization (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); esophageal cancer (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cilium (ortholog) NW_004955538 3688127 3696920 + 102010092 AGCD01071175;GBDJ01135101;XM_005410878;XM_005410881 XP_005410935;XP_005410938 MODEL 8979789 pseudo LOC102009531 eukaryotic translation initiation factor 4B pseudogene NW_004955512 1013969 1019267 + 102009531 AGCD01066629;XR_264452 MODEL 8769837 pseudo LOC102018117 GTPase RhebL1 pseudogene NW_004955428 18782844 18783372 + 102018117 AGCD01028071 MODEL 8855559 protein-coding Sbno2 strawberry notch homolog 2 INVOLVED IN bone mineralization (ortholog); bone trabecula morphogenesis (ortholog); cellular response to interleukin-11 (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955495 6709190 6770816 + 102015737 AGCD01062089;AGCD01062090;AGCD01062091;GBDF01137090;GBDK01144604;XM_013505095 XP_013360549 MODEL 39132705 snrna U6 U6 spliceosomal RNA 39132928 snrna U6 U6 spliceosomal RNA 10322064 ncrna LOC106147388 uncharacterized LOC106147388 NW_004955551 2101697 2134027 - 106147388 AGCD01072700;AGCD01072701;AGCD01072702;XR_001232269 MODEL 8954356 protein-coding Rabgef1 RAB guanine nucleotide exchange factor 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN dendritic transport (ortholog); endosomal transport (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); early endosome membrane (ortholog) NW_004955456 8648925 8716337 + 102008289 AGCD01046496;AGCD01046497;AGCD01046498;AGCD01046499;GBBH01126041;GBCB01061813;XM_005396718 XP_005396775 MODEL 8915280 protein-coding Kifc3 kinesin family member C3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN epithelial cell-cell adhesion (ortholog); Golgi organization (ortholog); microtubule-based process (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN centrosome (ortholog); Golgi apparatus (ortholog); kinesin complex (ortholog) NW_004955433 15365944 15428502 - 102004843 AGCD01031752;GBBH01214893;XM_013516178;XM_013516179;XM_013516180;XM_013516181;XM_013516182;XM_013516183;XM_013516184;XM_013516185;XM_013516186;XM_013516187;XM_013516188;XM_013516189;XM_013516190;XM_013516191;XM_013516192 XP_013371632;XP_013371633;XP_013371634;XP_013371635;XP_013371636;XP_013371637;XP_013371638;XP_013371639;XP_013371640;XP_013371641;XP_013371642;XP_013371643;XP_013371644;XP_013371645;XP_013371646 MODEL 9039057 protein-coding LOC102013566 uncharacterized LOC102013566 NW_004955448 17433598 17833238 + 102013566 AGCD01041719;AGCD01041720;AGCD01041721;AGCD01041722;AGCD01041723;AGCD01041724;AGCD01041725;AGCD01041726;GBDI01112397;XM_005393168;XM_013518622;XM_013518623;XR_001235774;XR_001235775;XR_001235776;XR_001235777;XR_001235778;XR_001235779 XP_005393225;XP_013374076;XP_013374077 MODEL 730469354 misc_rna SMAD5-AS1_3 SMAD5 antisense RNA 1 conserved region 3 8840618 protein-coding Fabp9 fatty acid binding protein 9 INVOLVED IN acrosome assembly (ortholog); FOUND IN acrosomal vesicle (ortholog); perinuclear theca (ortholog) NW_004955444 151003 153775 + 102007477 AGCD01038652;GBCQ01015779;GBCQ01015780;XM_013518147 XP_013373601 MODEL 8995716 protein-coding Tp53bp2 tumor protein p53 binding protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); NF-kappaB binding (ortholog); p53 binding (ortholog); INVOLVED IN central nervous system development (ortholog); embryo development ending in birth or egg hatching (ortholog); heart development (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); breast lobular carcinoma (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) NW_004955520 1254853 1285118 + 102011472 AGCD01068050;GBCB01040894;XM_013507058;XM_013507059;XM_013507060;XM_013507061 XP_013362512;XP_013362513;XP_013362514;XP_013362515 MODEL 8753221 protein-coding Syt12 synaptotagmin 12 INVOLVED IN long-term synaptic potentiation (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); spontaneous exocytosis of neurotransmitter (ortholog); ASSOCIATED WITH cerebral palsy (ortholog); Cognitive Dysfunction (ortholog); Dwarfism (ortholog); FOUND IN hippocampal mossy fiber to CA3 synapse (ortholog); presynapse (ortholog); synaptic vesicle (ortholog) NW_004955422 18359105 18381312 - 102026878 AGCD01022946;AGCD01022947;GBCE01176509;GBDJ01407588;XM_005384360 XP_005384417 MODEL 730469321 snorna SNORA1 Small nucleolar RNA SNORA1 8708707 protein-coding Ears2 glutamyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits glutamate-tRNA ligase activity (ortholog); glutamate-tRNA(Gln) ligase activity (ortholog); INVOLVED IN glutamyl-tRNA aminoacylation (ortholog); tRNA aminoacylation for mitochondrial protein translation (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; homocarnosinosis pathway; ASSOCIATED WITH Cardiac Arrhythmias (ortholog); Cognitive Dysfunction (ortholog); combined oxidative phosphorylation deficiency 12 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955493 2083272 2113403 - 102021021 AGCD01060925;AGCD01060926;GBCQ01035758;XM_005405096;XM_013504806;XM_013504807;XM_013504808 XP_005405153;XP_013360260;XP_013360261;XP_013360262 MODEL 8786281 protein-coding Them5 thioesterase superfamily member 5 ENCODES a protein that exhibits long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN long-chain fatty-acyl-CoA metabolic process (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) NW_004955589 546592 571844 + 102011490 AGCD01076175;AGCD01076176;GBDJ01020946;XM_005414538;XM_005414543;XM_005414545;XM_013509937;XM_013509938 XP_005414595;XP_005414600;XP_005414602;XP_013365391;XP_013365392 MODEL 8951458 pseudo LOC102012743 spliceosome-associated protein CWC15 homolog pseudogene NW_004955409 26641679 26646568 + 102012743 AGCD01010196 MODEL 8920596 protein-coding Slc26a11 solute carrier family 26 member 11 ENCODES a protein that exhibits chloride channel activity (ortholog); chloride:bicarbonate antiporter activity (ortholog); monoatomic anion transmembrane transporter activity (ortholog); INVOLVED IN sulfate transmembrane transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); esophageal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); endoplasmic reticulum (ortholog) NW_004955506 2683637 2701889 - 102020467 AGCD01065301;GBCE01057227;XM_005407328;XM_013505989;XM_013505990 XP_005407385;XP_013361443;XP_013361444 MODEL 39132693 snrna U6 U6 spliceosomal RNA 8864380 ncrna LOC102023276 uncharacterized LOC102023276 NW_004955423 25201905 25208897 - 102023276 AGCD01024058;AGCD01024059;XR_260994 MODEL 8806623 protein-coding Ube2b ubiquitin conjugating enzyme E2 B ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); chiasma assembly (ortholog); chromatin organization (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); HULC complex (ortholog) NW_004955408 5552619 5572145 + 102013253 AGCD01008141;AGCD01008142;GBBH01064886;XM_005376138;XM_005376139;XM_005376140;XM_005376142;XM_013508521 XP_005376195;XP_005376196;XP_005376197;XP_005376199;XP_013363975 MODEL 8933749 protein-coding LOC102022220 olfactory receptor 2H2-like NW_004955524 284524 285456 - 102022220 AGCD01068674;XM_005409659 XP_005409716 MODEL 39132977 snrna U1 U1 spliceosomal RNA 8982203 protein-coding LOC102003620 keratin-associated protein 14-like NW_004955407 29792800 29793709 - 102003620 AGCD01007615;XM_005375631 XP_005375688 MODEL 8874101 protein-coding Lmtk2 lemur tail kinase 2 ENCODES a protein that exhibits myosin VI binding (ortholog); protein phosphatase inhibitor activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endocytic recycling (ortholog); receptor recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); FOUND IN early endosome (ortholog); Golgi apparatus (ortholog); growth cone (ortholog) NW_004955460 14012047 14101969 + 102026951 AGCD01048736;AGCD01048737;AGCD01048738;GBDF01089102;XM_005397908;XM_005397909 XP_005397965;XP_005397966 MODEL 8949389 ncrna LOC102013113 uncharacterized LOC102013113 NW_004955432 22553707 22573140 - 102013113 AGCD01031262;GBDJ01369374;XR_001234681;XR_001234682;XR_001234683;XR_001234684;XR_001234685;XR_001234686;XR_001234687;XR_001234688;XR_001234689 MODEL 8929141 protein-coding Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 ENCODES a protein that exhibits ATPase activator activity (ortholog); DNA binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); chorio-allantoic fusion (ortholog); chorion development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) NW_004955579 240058 298592 + 102030684 AGCD01075541;AGCD01075542;GBDI01021155;XM_005414100;XM_005414101 XP_005414157;XP_005414158 MODEL 9055533 protein-coding Mc5r melanocortin 5 receptor ENCODES a protein that exhibits corticotropin receptor activity (ortholog); hormone binding (ortholog); melanocortin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of immune response (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; melanocortin system pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); FOUND IN plasma membrane (ortholog) NW_004955402 283388 286884 - 102005649 AGCD01000016;GBDJ01263262;XM_005372544;XM_005372545 XP_005372601;XP_005372602 MODEL 8794244 protein-coding LOC102019345 formin-like protein 16 NW_004955450 7449780 7452569 - 102019345 AGCD01042538;GBDK01081219;XM_005393672 XP_005393729 MODEL 8893271 pseudo LOC102021527 olfactory receptor 6C65-like NW_004955458 2783468 2787627 + 102021527 AGCD01047243 MODEL 8731730 protein-coding Flvcr2 FLVCR choline and putative heme transporter 2 ENCODES a protein that exhibits choline binding (ortholog); choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); INVOLVED IN brain development (ortholog); choline transport (ortholog); endothelial tip cell fate specification (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colon adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial membrane (ortholog); plasma membrane (ortholog) NW_004955612 46723 99012 + 102023420 AGCD01077180;GBDK01076389;XM_005414963;XM_005414964;XM_013510128;XM_013510129 XP_005415020;XP_005415021;XP_013365582;XP_013365583 MODEL 8729523 protein-coding Slc12a9 solute carrier family 12 member 9 ASSOCIATED WITH Breast Cancer, Familial (ortholog); cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN lysosomal membrane (ortholog) NW_004955573 107337 125875 - 102011819 AGCD01074962;AGCD01074963;GBBH01142219;GBDJ01136651;XM_005413684;XM_013509455;XM_013509456;XM_013509457;XM_013509458;XM_013509459 XP_005413741;XP_013364909;XP_013364910;XP_013364911;XP_013364912;XP_013364913 MODEL 8744946 ncrna LOC102016201 uncharacterized LOC102016201 NW_004955441 13879512 13884570 - 102016201 AGCD01037163;GBCB01091731;XR_262077 MODEL 8870140 protein-coding Daam2 dishevelled associated activator of morphogenesis 2 INVOLVED IN determination of left/right symmetry (ortholog); dorsal spinal cord development (ortholog); negative regulation of oligodendrocyte differentiation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog) NW_004955437 6728703 6839903 + 102030565 AGCD01034443;AGCD01034444;GBDI01353991;XM_005389656;XM_005389657;XM_013516989;XM_013516990 XP_005389713;XP_005389714;XP_013372443;XP_013372444 MODEL 8987126 protein-coding Ttc9b tetratricopeptide repeat domain 9B NW_004955578 1014670 1018120 + 102018664 AGCD01075504;GBBH01021853;XM_005414071 XP_005414128 MODEL 9066665 protein-coding Syt13 synaptotagmin 13 INVOLVED IN epithelial cell differentiation (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); regulation of cell cycle (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); breast cancer (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN plasma membrane (ortholog); transport vesicle (ortholog) NW_004955422 2561660 2600863 + 102021018 AGCD01022485;AGCD01022486;AGCD01022487;GBDF01066237;XM_005384072 XP_005384129 MODEL 8725587 protein-coding Brme1 break repair meiotic recombinase recruitment factor 1 ENCODES a protein that exhibits damaged DNA binding (ortholog); INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); female meiosis I (ortholog); male meiosis I (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome (ortholog); site of double-strand break (ortholog) NW_004955415 32652978 32667873 - 102015838 AGCD01016730;GBBH01138965;XM_013512198;XM_013512199;XM_013512200;XM_013512201;XM_013512202;XM_013512203;XM_013512204;XM_013512205;XM_013512206;XM_013512207 XP_013367652;XP_013367653;XP_013367654;XP_013367655;XP_013367656;XP_013367657;XP_013367658;XP_013367659;XP_013367660;XP_013367661 MODEL 8952591 protein-coding Sdccag8 SHH signaling and ciliogenesis regulator SDCCAG8 INVOLVED IN establishment of cell polarity (ortholog); microtubule organizing center organization (ortholog); neuron migration (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 16 (ortholog); cervical cancer (ortholog); FOUND IN cell-cell junction (ortholog); centriolar satellite (ortholog); centriole (ortholog) NW_004955406 6694687 6909555 + 102028376 AGCD01005756;AGCD01005757;AGCD01005758;AGCD01005759;AGCD01005760;AGCD01005761;AGCD01005762;GBDF01119111;XM_005374761;XM_005374762;XM_013520309;XM_013520314;XM_013520316;XM_013520317;XM_013520318;XM_013520320 XP_005374818;XP_005374819;XP_013375763;XP_013375768;XP_013375770;XP_013375771;XP_013375772;XP_013375774 MODEL 8809089 protein-coding LOC102009539 uncharacterized LOC102009539 NW_004955436 8518608 8525672 + 102009539 AGCD01033743;XM_013516636;XM_013516637;XM_013516638 XP_013372090;XP_013372091;XP_013372092 MODEL 8726704 protein-coding Gna12 G protein subunit alpha 12 ENCODES a protein that exhibits D5 dopamine receptor binding (ortholog); G protein activity (ortholog); protein phosphatase 2A binding (ortholog); INVOLVED IN cell differentiation (ortholog); embryonic digit morphogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH Myocardial Ischemia (ortholog); ovarian serous cystadenocarcinoma (ortholog); stomach cancer (ortholog); FOUND IN brush border membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) NW_004955460 12534210 12628090 + 102011512 AGCD01048660;AGCD01048661;GBCB01042795;GBCQ01096239;XM_005397862 XP_005397919 MODEL 9058377 pseudo LOC102004694 tubulin alpha chain-like NW_004955470 11493665 11502589 + 102004694 AGCD01052889 MODEL 9001975 protein-coding Ldb1 LIM domain binding 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); cerebellar Purkinje cell differentiation (ortholog); cerebellum development (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder (ortholog); melanoma (ortholog); nail-patella syndrome (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); cell leading edge (ortholog); chromatin (ortholog) NW_004955485 8229517 8242003 + 102022605 AGCD01058701;AGCD01058702;GBBH01031347;XM_005403862;XM_005403863;XM_005403865;XM_005403866 XP_005403919;XP_005403920;XP_005403922;XP_005403923 MODEL 9036761 protein-coding Impdh2 inosine monophosphate dehydrogenase 2 ENCODES a protein that exhibits identical protein binding (ortholog); IMP dehydrogenase activity (ortholog); nucleotide binding (ortholog); INVOLVED IN 'de novo' XMP biosynthetic process (ortholog); cellular response to interleukin-4 (ortholog); circadian rhythm (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; mycophenolic acid pharmacokinetics pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) NW_004955532 1047138 1051980 - 102006279 AGCD01070164;GBDI01080320;XM_005410178;XM_013507582 XP_005410235;XP_013363036 MODEL 8960403 protein-coding LOC102006871 torsin-1A-interacting protein 2, isoform IFRG15 NW_004955406 19105586 19108003 - 102006871 AGCD01006074;GBDJ01313313;XM_005374968 XP_005375025 MODEL 8933351 protein-coding Sbsn suprabasin ASSOCIATED WITH esophageal cancer (ortholog); lung squamous cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955468 4746856 4751722 - 102020791 AGCD01051919;AGCD01051920;AGCD01051921;GBCC01000141;XM_013522549;XM_013522550 XP_013378003;XP_013378004 MODEL 8722859 pseudo LOC102018936 MLN64 N-terminal domain homolog pseudogene NW_004955420 268901 269761 + 102018936 AGCD01020539 MODEL 8997992 protein-coding Yju2 YJU2 splicing factor homolog ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN nucleus (ortholog); spliceosomal complex (ortholog); U2-type catalytic step 1 spliceosome (ortholog) NW_004955495 4591242 4605403 - 102011131 AGCD01061935;AGCD01061936;GBDF01187806;XM_005405805;XM_005405806 XP_005405862;XP_005405863 MODEL 8830953 protein-coding LOC102025422 nucleoside diphosphate kinase B NW_004955451 10731941 10736353 - 102025422 AGCD01043329;AGCD01043330;GBDJ01018363;XM_005394110;XM_005394111 XP_005394167;XP_005394168 MODEL 8793759 pseudo LOC102005395 DNA polymerase delta subunit 4 pseudogene NW_004955425 561831 562286 - 102005395 AGCD01025186 MODEL 39132930 snrna U6 U6 spliceosomal RNA 8764414 protein-coding Luzp2 leucine zipper protein 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog) NW_004955476 4440671 4866215 + 102012534 AGCD01055283;AGCD01055284;AGCD01055285;AGCD01055286;AGCD01055287;AGCD01055288;AGCD01055289;AGCD01055290;AGCD01055291;AGCD01055292;GBDI01263507;GBDI01263508;XM_005401738 XP_005401795 MODEL 10083659 ncrna LOC106149608 uncharacterized LOC106149608 NW_004955450 12402239 12419020 + 106149608 AGCD01042702;XR_001235913 MODEL 10329503 ncrna LOC106147389 uncharacterized LOC106147389 NW_004955551 40285 43556 - 106147389 AGCD01072649;GBDF01122630;XR_001232274 MODEL 8775529 pseudo LOC102003953 60S ribosomal protein L12 pseudogene NW_004955463 738958 739526 - 102003953 AGCD01049497 MODEL 8914152 pseudo LOC102013568 anaphase-promoting complex subunit 15 pseudogene NW_004955450 3337411 3337795 + 102013568 AGCD01042429 MODEL 8976495 protein-coding Rabggtb Rab geranylgeranyltransferase subunit beta ENCODES a protein that exhibits isoprenoid binding (ortholog); protein geranylgeranyltransferase activity (ortholog); Rab geranylgeranyltransferase activity (ortholog); INVOLVED IN protein geranylgeranylation (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); Rab-protein geranylgeranyltransferase complex (ortholog) NW_004955423 17155161 17162237 - 102025134 AGCD01023846;AGCD01023847;GBCB01001195;XM_005385227 XP_005385284 MODEL 8986522 protein-coding LOC102020787 uncharacterized LOC102020787 NW_004955467 9583663 9587823 - 102020787 AGCD01051519;GBDK01413799;XM_005399519;XM_013522123;XM_013522124;XM_013522125;XM_013522127 XP_005399576;XP_013377577;XP_013377578;XP_013377579;XP_013377581 MODEL 8963047 protein-coding Hace1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits small GTPase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN Golgi organization (ortholog); membrane fusion (ortholog); protein K48-linked ubiquitination (ortholog); ASSOCIATED WITH Ataxia (ortholog); Breast Cancer, Familial (ortholog); cerebellar ataxia (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi membrane (ortholog) NW_004955411 30178297 30260627 - 102028838 AGCD01012250;AGCD01012251;GBCQ01175922;XM_005377818;XM_013510784;XM_013510785 XP_005377875;XP_013366238;XP_013366239 MODEL 8725641 pseudo LOC102018118 protein S100-A10 pseudogene NW_004955507 5694303 5694594 + 102018118 AGCD01065684 MODEL 8887520 protein-coding Nt5m 5',3'-nucleotidase, mitochondrial ENCODES a protein that exhibits 3'-nucleotidase activity (ortholog); 5'-nucleotidase activity (ortholog); INVOLVED IN dGMP catabolic process (ortholog); dTMP catabolic process (ortholog); dUMP catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) NW_004955577 582206 608614 - 102025301 AGCD01075399;AGCD01075400;AGCD01075401;AGCD01075402;GBCE01004088;GBCE01004093;XM_013509639 XP_013365093 MODEL 9027005 pseudo LOC102020397 DNA-directed RNA polymerases I, II, and III subunit RPABC4 pseudogene NW_004955448 6798525 6799244 + 102020397 AGCD01041393;XM_005393159 MODEL 9050290 protein-coding Tbc1d15 TBC1 domain family member 15 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) NW_004955405 11821601 11876133 + 102005002 AGCD01004844;GBDF01158753;XM_005374322;XM_005374323;XM_013517636 XP_005374379;XP_005374380;XP_013373090 MODEL 8942709 protein-coding LOC102023277 olfactory receptor 18-like NW_004955495 679418 680405 + 102023277 AGCD01061649;XM_013505087 XP_013360541 MODEL 39132544 snrna U6 U6 spliceosomal RNA 9027856 protein-coding Slc26a2 solute carrier family 26 member 2 ENCODES a protein that exhibits oxalate transmembrane transporter activity (ortholog); solute:inorganic anion antiporter activity (ortholog); sulfate transmembrane transporter activity (ortholog); INVOLVED IN chondrocyte differentiation (ortholog); chondrocyte proliferation (ortholog); oxalate transport (ortholog); ASSOCIATED WITH 3MC syndrome 2 (ortholog); achondrogenesis type IB (ortholog); acute myeloid leukemia (ortholog); FOUND IN apical plasma membrane (ortholog); microvillus membrane (ortholog); plasma membrane (ortholog) NW_004955415 4540302 4556360 - 102019592 AGCD01015974;GBDJ01124708;XM_005380589;XM_005380590;XM_013512336 XP_005380646;XP_005380647;XP_013367790 MODEL 8954182 protein-coding Ube2c ubiquitin conjugating enzyme E2 C ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin-like protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); exit from mitosis (ortholog); free ubiquitin chain polymerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN anaphase-promoting complex (ortholog); cytosol (ortholog); plasma membrane (ortholog) NW_004955445 11474826 11479479 - 102029133 AGCD01039696;GBCB01020523;XM_005392413;XM_013518340 XP_005392470;XP_013373794 MODEL 8813585 pseudo LOC102013114 transmembrane protein 54 pseudogene NW_004955435 7874595 7902075 - 102013114 AGCD01032980;AGCD01032981 MODEL 9052662 protein-coding Kin Kin17 DNA and RNA binding protein ENCODES a protein that exhibits double-stranded DNA binding (ortholog); RNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA replication (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear matrix (ortholog) NW_004955421 24196909 24234320 - 102009618 AGCD01022209;GBDK01060925;XM_005383878 XP_005383935 MODEL 730469364 snorna SNORA1 Small nucleolar RNA SNORA1 8886297 ncrna LOC102005400 uncharacterized LOC102005400 NW_004955507 3809575 3820981 - 102005400 AGCD01065638;GBDF01158104;XR_001231636 MODEL 8827319 protein-coding Dnajb7 DnaJ heat shock protein family (Hsp40) member B7 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog) NW_004955413 26510844 26512855 - 102014229 AGCD01014446;GBDF01143714;XM_005379335 XP_005379392 MODEL 39132117 snrna U6 U6 spliceosomal RNA 8945418 protein-coding Ebag9 estrogen receptor binding site associated antigen 9 INVOLVED IN adaptive immune memory response involving T cells and B cells (ortholog); T cell mediated cytotoxicity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Golgi apparatus (ortholog); secretory granule (ortholog) NW_004955417 16941035 16958876 + 102024334 AGCD01018278;AGCD01018279;GBDF01089049;XM_013512747 XP_013368201 MODEL 8917601 protein-coding Them6 thioesterase superfamily member 6 NW_004955454 1433644 1438156 + 102020081 AGCD01044969;GBCB01002054;XM_005395736 XP_005395793 MODEL 8950800 protein-coding LOC102012744 cleavage stimulation factor subunit 2 tau variant-like NW_004955462 1470966 1474745 + 102012744 AGCD01049120;XM_013521365 XP_013376819 MODEL 39132695 snrna U6 U6 spliceosomal RNA 9018087 protein-coding Impg1 interphotoreceptor matrix proteoglycan 1 INVOLVED IN extracellular matrix organization (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); esophageal cancer (ortholog); fundus dystrophy (ortholog); FOUND IN gel phase of interstitial matrix (ortholog); interphotoreceptor matrix (ortholog); photoreceptor inner segment (ortholog) NW_004955502 4359071 4502623 - 102013312 AGCD01064334;AGCD01064335;AGCD01064336;AGCD01064337;GBDF01259084;XM_013505815 XP_013361269 MODEL 8758566 pseudo LOC102022224 melanoma-associated antigen B3-like NW_004955531 872687 874486 - 102022224 AGCD01070016 MODEL 8920851 protein-coding Sde2 spliceosome associated SDE2 ENCODES a protein that exhibits damaged DNA binding (ortholog); snoRNA binding (ortholog); INVOLVED IN cellular response to UV (ortholog); endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); Familial Pancreatic Carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) NW_004955489 181425 210966 - 102009286 AGCD01059783;AGCD01059784;AGCD01059785;GBDF01044042;XM_005404490 XP_005404547 MODEL 8761319 protein-coding Ldb2 LIM domain binding 2 ENCODES a protein that exhibits enzyme binding (ortholog); LIM domain binding (ortholog); INVOLVED IN epithelial structure maintenance (ortholog); hair follicle development (ortholog); positive regulation of cellular component biogenesis (ortholog); ASSOCIATED WITH cervical cancer (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN cell leading edge (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) NW_004955480 7200111 7568567 + 102009718 AGCD01056699;AGCD01056700;AGCD01056701;AGCD01056702;AGCD01056703;AGCD01056704;AGCD01056705;AGCD01056706;GBDK01093518;XM_005402501;XM_005402502;XM_005402503;XM_005402504;XM_005402505;XM_005402506;XM_005402507;XM_005402508;XM_005402509 XP_005402558;XP_005402559;XP_005402560;XP_005402561;XP_005402562;XP_005402563;XP_005402564;XP_005402565;XP_005402566 MODEL 8775986 pseudo LOC102025424 40S ribosomal protein S6 pseudogene NW_004955451 12176705 12177203 - 102025424 AGCD01043377;XM_005394211 MODEL 8932056 ncrna LOC102019350 uncharacterized LOC102019350 NW_004955452 1066239 1067076 + 102019350 AGCD01043830;GBDF01124799;XR_262632 MODEL 8831553 protein-coding Fadd Fas associated via death domain ENCODES a protein that exhibits caspase binding (ortholog); death effector domain binding (ortholog); death receptor binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); behavioral response to cocaine (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; Trail mediated signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN caspase complex (ortholog); CD95 death-inducing signaling complex (ortholog); cell body (ortholog) NW_004955422 16026323 16035808 - 102021355 AGCD01022888;GBCE01065224;XM_005384238 XP_005384295 MODEL 8977180 protein-coding Tedc2 tubulin epsilon and delta complex 2 INVOLVED IN cytoskeleton organization (ortholog); microtubule cytoskeleton organization (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cilium (ortholog) NW_004955442 14856517 14862391 - 102023203 AGCD01037845;GBDJ01006881;XM_005391427;XM_013517938;XM_013517939;XM_013517940 XP_005391484;XP_013373392;XP_013373393;XP_013373394 MODEL 8899365 protein-coding LOC102021528 probable C-mannosyltransferase DPY19L2 NW_004955460 5077043 5137707 + 102021528 AGCD01048446;AGCD01048447;AGCD01048448;GBDF01005800;XM_013521261;XM_013521262;XM_013521263 XP_013376715;XP_013376716;XP_013376717 MODEL 8720069 pseudo LOC102016205 chondroitin sulfate N-acetylgalactosaminyltransferase 2-like NW_004955442 17178781 17201854 - 102016205 AGCD01037944;AGCD01037945;AGCD01037946 MODEL 8983946 protein-coding LOC102013569 late cornified envelope protein 1C NW_004955592 613174 614854 - 102013569 AGCD01076320;GBDI01027737;XM_005414621 XP_005414678 MODEL 10271817 ncrna LOC106149609 uncharacterized LOC106149609 NW_004955450 4002939 4004600 + 106149609 AGCD01042453;GBDF01242871;XR_001235914 MODEL 8731415 protein-coding Slc13a1 solute carrier family 13 member 1 ENCODES a protein that exhibits monoatomic anion:sodium symporter activity (ortholog); secondary active sulfate transmembrane transporter activity (ortholog); sodium:sulfate symporter activity (ortholog); INVOLVED IN sodium ion transport (ortholog); sulfate transmembrane transport (ortholog); FOUND IN apical plasma membrane (ortholog) NW_004955479 4697374 4775836 - 102012094 AGCD01056330;AGCD01056331;GBCQ01006342;XM_005402324 XP_005402381 MODEL 39132931 snrna U6 U6 spliceosomal RNA 8800357 protein-coding Mcam melanoma cell adhesion molecule INVOLVED IN angiogenesis (ortholog); glomerular filtration (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH autoimmune disease of the nervous system (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); plasma membrane (ortholog) NW_004955412 20396056 20404777 - 102005125 AGCD01013007;GBDK01014574;XM_005378329;XM_005378330 XP_005378386;XP_005378387 MODEL 9002129 protein-coding LOC102003956 beta-galactosidase-1-like protein 2 NW_004955412 35115232 35201119 + 102003956 AGCD01013400;AGCD01013401;AGCD01013402;AGCD01013403;AGCD01013404;AGCD01013405;GBDF01221467;XM_005378598 XP_005378655 MODEL 8991085 protein-coding Dab1 DAB adaptor protein 1 ENCODES a protein that exhibits phosphatidylinositol 3-kinase binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN adult walking behavior (ortholog); cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration (ortholog); cerebellum structural organization (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Familial Pancreatic Carcinoma (ortholog); high grade glioma (ortholog); FOUND IN apical part of cell (ortholog); brush border (ortholog); cytoplasm (ortholog) NW_004955464 2325529 2721497 + 102019784 AGCD01049964;AGCD01049965;GBDI01207950;XM_013521740;XM_013521741;XM_013521743;XM_013521744;XM_013521745 XP_013377194;XP_013377195;XP_013377197;XP_013377198;XP_013377199 MODEL 9005425 protein-coding LOC102006874 immunoglobulin omega chain-like NW_004955455 6441139 6441749 + 102006874 AGCD01045796;GBDI01034310;XM_005396571 XP_005396628 MODEL 730469164 misc_rna SMAD5-AS1_4 SMAD5 antisense RNA 1 conserved region 4 8936579 protein-coding Map2k5 mitogen-activated protein kinase kinase 5 ENCODES a protein that exhibits ATP binding (ortholog); MAP kinase kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); ERK5 cascade (ortholog); heart development (ortholog); PARTICIPATES IN altered Erk5 MAPK signaling pathway; Erk5 MAPK signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); Body Weight (ortholog); FOUND IN spindle (ortholog) NW_004955450 8207577 8458258 - 102023545 AGCD01042566;GBBH01025418;XM_005393684;XM_005393686;XM_005393687;XM_005393688;XM_013518964;XM_013518966;XM_013518967 XP_005393741;XP_005393743;XP_005393744;XP_005393745;XP_013374418;XP_013374420;XP_013374421 MODEL 8796980 protein-coding Ebf1 EBF transcription factor 1 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); cervical cancer (ortholog); disease of cellular proliferation (ortholog); FOUND IN nucleus (ortholog) NW_004955408 12735893 13121700 - 102019670 AGCD01008343;AGCD01008344;AGCD01008345;AGCD01008346;GBCB01111862;GBCQ01031704;XM_013508845 XP_013364299 MODEL 8914525 protein-coding Yju2b YJU2 splicing factor homolog B INVOLVED IN response to virus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); esophageal cancer (ortholog) NW_004955415 32560182 32584747 + 102003761 AGCD01016726;GBDF01089311;XM_005381059;XM_005381060;XM_005381063 XP_005381116;XP_005381117;XP_005381120 MODEL 10222013 ncrna LOC106147390 uncharacterized LOC106147390 NW_004955551 1831345 1846569 - 106147390 AGCD01072699;XR_001232276 MODEL 8981339 protein-coding Gfra2 GDNF family receptor alpha 2 ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); heparan sulfate binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); negative regulation of protein autophosphorylation (ortholog); ASSOCIATED WITH chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Optic Nerve Injuries (ortholog); Parkinsonism (ortholog); FOUND IN plasma membrane (ortholog) NW_004955403 45235161 45324825 - 102027601 AGCD01002813;GBDK01236692;XM_005373635;XM_005373636;XM_005373637 XP_005373692;XP_005373693;XP_005373694 MODEL 8926430 protein-coding LOC102022225 HLA class II histocompatibility antigen, DO beta chain-like NW_004955437 1442202 1449219 - 102022225 AGCD01034209;GBCE01114002;XM_005389456 XP_005389513 MODEL 9018284 protein-coding Tp53i11 tumor protein p53 inducible protein 11 ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog) NW_004955422 2829212 2833197 + 102022504 AGCD01022495;GBCB01113268;GBDF01308043;XM_013514200 XP_013369654 MODEL 9066947 protein-coding Ube2d1 ubiquitin conjugating enzyme E2 D1 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of TORC1 signaling (ortholog); positive regulation of protein polyubiquitination (ortholog); positive regulation of protein ubiquitination (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); protein-containing complex (ortholog) NW_004955425 12073267 12090613 + 102009520 AGCD01025499;GBCB01000993;XM_005385913 XP_005385970 MODEL 9017189 protein-coding Flywch1 FLYWCH-type zinc finger 1 ENCODES a protein that exhibits transcription coactivator binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955442 14392901 14419178 - 102012692 AGCD01037815;AGCD01037816;GBDJ01238933;XM_005391393;XM_005391394;XM_013517968;XM_013517969;XM_013517970;XM_013517971;XM_013517972;XM_013517973;XM_013517974;XM_013517975;XM_013517976 XP_005391450;XP_005391451;XP_013373422;XP_013373423;XP_013373424;XP_013373425;XP_013373426;XP_013373427;XP_013373428;XP_013373429;XP_013373430 MODEL 8825357 protein-coding LOC102005403 olfactory receptor 8J3-like NW_004955511 1471770 1480062 + 102005403 AGCD01066369;XM_005407962 XP_005408019 MODEL 10360312 protein-coding LOC106150159 coiled-coil domain-containing protein 177-like NW_004955466 816300 819381 + 106150159 AGCD01050677;GBBH01083110;XM_013521968 XP_013377422 MODEL 9029785 pseudo LOC102004696 V-type proton ATPase subunit F pseudogene NW_004955414 25610808 25611315 + 102004696 AGCD01015615;XM_005380431 MODEL 8948552 protein-coding Gna13 G protein subunit alpha 13 ENCODES a protein that exhibits D5 dopamine receptor binding (ortholog); G protein activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); angiogenesis (ortholog); PARTICIPATES IN eicosanoid signaling pathway; G protein mediated signaling pathway via Galpha12/Galpha13 family; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Burkitt lymphoma (ortholog); disease of cellular proliferation (ortholog); FOUND IN brush border membrane (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) NW_004955478 4510932 4552646 - 102003543 AGCD01055851;GBCB01042798;GBDF01080307;XM_005402134 XP_005402191 MODEL 8871990 pseudo LOC102003621 chromobox protein homolog 3 pseudogene NW_004955455 2292708 2293259 - 102003621 AGCD01045592;XM_005396565 MODEL 39132118 snrna U6 U6 spliceosomal RNA 8858827 protein-coding LOC102018121 vomeronasal type-1 receptor 90-like NW_004955429 12382792 12383739 + 102018121 AGCD01028715;XM_005387248 XP_005387305 MODEL 8708006 protein-coding LOC102018938 olfactory receptor 7D4-like NW_004955495 581689 582633 + 102018938 AGCD01061640;XM_005405557 XP_005405614 MODEL 8905903 protein-coding Hacl1 2-hydroxyacyl-CoA lyase 1 ENCODES a protein that exhibits 2-hydroxyacyl-CoA lyase activity (ortholog); 2-hydroxyphytanoyl-CoA lyase activity (ortholog); ATP binding (ortholog); INVOLVED IN fatty acid alpha-oxidation (ortholog); fatty acid metabolic process (ortholog); lipid metabolic process (ortholog); PARTICIPATES IN phytanic acid degradation pathway; Refsum disease pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN peroxisome (ortholog) NW_004955430 2055774 2096260 - 102012884 AGCD01029149;AGCD01029150;GBBH01041268;GBDI01294884;XM_005387308 XP_005387365 MODEL 9030311 protein-coding Slc13a2 solute carrier family 13 member 2 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); citrate transmembrane transporter activity (ortholog); fumarate transmembrane transporter activity (ortholog); INVOLVED IN alpha-ketoglutarate transport (ortholog); cellular response to lithium ion (ortholog); fumarate transport (ortholog); ASSOCIATED WITH ovarian serous cystadenocarcinoma (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog) NW_004955481 4650356 4674441 - 102003966 AGCD01056948;AGCD01056949;GBCQ01062860;XM_005402752 XP_005402809 MODEL 8892193 protein-coding Sbspon somatomedin B and thrombospondin type 1 domain containing ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); Hepatomegaly (ortholog) NW_004955444 7068906 7094583 + 102011369 AGCD01038889;AGCD01038890;GBCQ01098259;XM_013518221 XP_013373675 MODEL 8985752 protein-coding Ntan1 N-terminal asparagine amidase ENCODES a protein that exhibits protein-N-terminal asparagine amidohydrolase activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); memory (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955442 169814 186253 + 102021395 AGCD01037414;GBDF01047998;XM_005391059 XP_005391116 MODEL 8735313 pseudo LOC102023278 uncharacterized LOC102023278 NW_004955500 6475946 6492522 - 102023278 AGCD01063882;AGCD01063883 MODEL 39132545 snrna U6 U6 spliceosomal RNA 8876005 protein-coding Luzp4 leucine zipper protein 4 ASSOCIATED WITH nonpapillary renal cell carcinoma (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955490 448290 490242 - 102025366 AGCD01060064;AGCD01060065;AGCD01060066;GBDF01226192;XM_005404620;XM_005404621 XP_005404677;XP_005404678 MODEL 8871664 ncrna LOC102020795 uncharacterized LOC102020795 NW_004955472 1467889 1468164 - 102020795 AGCD01053394;GBCQ01096208;XR_263544 MODEL 8850169 protein-coding Kirrel1 kirre like nephrin family adhesion molecule 1 ENCODES a protein that exhibits myosin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); cell-cell junction maintenance (ortholog); glomerular filtration (ortholog); ASSOCIATED WITH Familial Pancreatic Carcinoma (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cell projection membrane (ortholog); cell-cell junction (ortholog); dendritic shaft (ortholog) NW_004955468 9820649 9919958 + 102020646 AGCD01052060;AGCD01052061;AGCD01052062;GBCE01154497;XM_005400135;XM_013522482;XM_013522483 XP_005400192;XP_013377936;XP_013377937 MODEL 10276397 protein-coding LOC106147391 translation initiation factor IF-2-like NW_004955552 2297329 2298316 + 106147391 AGCD01072808;GBDF01280772;XM_013508597 XP_013364051 MODEL 8852135 protein-coding Dnajb8 DnaJ heat shock protein family (Hsp40) member B8 ENCODES a protein that exhibits protein folding chaperone (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN negative regulation of inclusion body assembly (ortholog); protein folding (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) NW_004955429 15349346 15350343 + 102025384 AGCD01028804;GBDF01011338;XM_005387042 XP_005387099 MODEL 10300641 protein-coding Fads1 fatty acid desaturase 1 ENCODES a protein that exhibits acyl-CoA (8-3)-desaturase activity (ortholog); acyl-CoA 6-desaturase activity (ortholog); omega-6 fatty acid desaturase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cellular response to starvation (ortholog); fatty acid biosynthetic process (ortholog); PARTICIPATES IN alpha-linolenic acid metabolic pathway; linoleic acid metabolic pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Cardiac Fibrosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955511 5908394 5915764 + 106146259 AGCD01066592;GBBH01034296;GBDJ01124691;XM_013506431 XP_013361885 MODEL 8804927 protein-coding Themis thymocyte selection associated INVOLVED IN negative T cell selection (ortholog); positive T cell selection (ortholog); T cell receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); celiac disease (ortholog); colon adenocarcinoma (ortholog); FOUND IN cell-cell junction (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) NW_004955436 8743835 8909040 - 102010627 AGCD01033751;AGCD01033752;GBDI01273776;XM_005389174;XM_005389175;XM_005389176;XM_005389177 XP_005389231;XP_005389232;XP_005389233;XP_005389234 MODEL 39132696 snrna U6 U6 spliceosomal RNA 39132933 snrna U6 U6 spliceosomal RNA 8836173 protein-coding Dab2 DAB adaptor protein 2 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); cargo receptor activity (ortholog); clathrin binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); cholangiocarcinoma (ortholog); esophageal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); clathrin coat of coated pit (ortholog); clathrin-coated pit (ortholog) NW_004955426 23852752 23883030 - 102010924 AGCD01026658;AGCD01026659;GBBH01006783;GBCE01028917;XM_013514991 XP_013370445 MODEL 8709853 protein-coding LOC102009550 olfactory receptor 5AU1 NW_004955550 1921231 1923589 - 102009550 AGCD01072598;XM_013508583 XP_013364037 MODEL 8948397 ncrna LOC102020398 uncharacterized LOC102020398 NW_004955402 19310308 19321050 - 102020398 AGCD01000558;AGCD01000559;GBDF01182124;XR_259056 MODEL 10125738 ncrna LOC106149610 uncharacterized LOC106149610 NW_004955450 6174292 6216586 - 106149610 AGCD01042520;XR_001235915 MODEL 8944780 protein-coding Tbc1d16 TBC1 domain family member 16 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of cilium assembly (ortholog); regulation of receptor recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Cancer, Familial (ortholog); cervical cancer (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog) NW_004955506 2840682 2925010 + 102021783 AGCD01065301;AGCD01065302;AGCD01065303;AGCD01065304;AGCD01065305;GBDF01181391;XM_005407331;XM_005407332;XM_005407333;XM_005407334;XM_005407335 XP_005407388;XP_005407389;XP_005407390;XP_005407391;XP_005407392 MODEL 8859862 protein-coding Sdf2 stromal cell derived factor 2 ENCODES a protein that exhibits misfolded protein binding (ortholog); INVOLVED IN protein refolding (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); clear cell renal cell carcinoma (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); protein folding chaperone complex (ortholog) NW_004955481 4497611 4506224 + 102027642 AGCD01056942;GBCQ01068706;XM_005402738 XP_005402795 MODEL 8749281 protein-coding Ldb3 LIM domain binding 3 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); enzyme binding (ortholog); muscle alpha-actinin binding (ortholog); INVOLVED IN sarcomere organization (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH Cardiac Arrhythmias (ortholog); cardiomyopathy (ortholog); cardiovascular system disease (ortholog); FOUND IN cytoskeleton (ortholog); Z disc (ortholog) NW_004955510 5738254 5793643 + 102021785 AGCD01066292;AGCD01066293;GBCB01005255;XM_013506311 XP_013361765 MODEL 8762763 protein-coding Slc26a3 solute carrier family 26 member 3 ENCODES a protein that exhibits bicarbonate transmembrane transporter activity (ortholog); chloride transmembrane transporter activity (ortholog); chloride:bicarbonate antiporter activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); intracellular pH elevation (ortholog); membrane hyperpolarization (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH Blue Nevus (ortholog); Breast Cancer, Familial (ortholog); congenital secretory chloride diarrhea 1 (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); membrane (ortholog) NW_004955410 12102356 12128620 - 102007745 AGCD01010844;GBCQ01075050;XM_005377290 XP_005377347 MODEL 8978887 pseudo LOC102025430 transcription intermediary factor 1-alpha pseudogene NW_004955405 25278212 25279816 - 102025430 AGCD01005174 MODEL 730469201 snorna SNORA1 Small nucleolar RNA SNORA1 8850806 protein-coding LOC102013115 vomeronasal type-2 receptor 116-like NW_004955524 3532203 3543838 - 102013115 AGCD01068906;XM_013507197 XP_013362651 MODEL 8861143 protein-coding Ykt6 YKT6 vesicular SNARE protein ENCODES a protein that exhibits protein-cysteine S-palmitoyltransferase activity (ortholog); SNAP receptor activity (ortholog); vesicle docking activity (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); retrograde transport, endosome to Golgi (ortholog); vesicle-mediated transport (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog); FOUND IN apical dendrite (ortholog); basal dendrite (ortholog); cytoplasm (ortholog) NW_004955456 7764125 7776429 - 102020420 AGCD01046431;GBDI01128538;XM_005396667;XM_005396668 XP_005396724;XP_005396725 MODEL 8906525 protein-coding Teddm1 transmembrane epididymal protein 1 NW_004955406 21282941 21285402 - 102016975 AGCD01006122;XM_005375003 XP_005375060 MODEL 9024365 protein-coding LOC102022229 polyprenol reductase-like NW_004955539 2081223 2090140 - 102022229 AGCD01071219;XM_005410906 XP_005410963 MODEL 8724043 protein-coding LOC102016208 vomeronasal type-1 receptor 4-like NW_004955569 1032355 1033407 + 102016208 AGCD01074632;XM_005413517 XP_005413574 MODEL 8926991 protein-coding LOC102021530 uncharacterized LOC102021530 NW_004955409 2232328 2240671 + 102021530 AGCD01009192;AGCD01009193;GBDI01039009;XM_013510034 XP_013365488 MODEL 8765741 ncrna LOC102013571 uncharacterized LOC102013571 NW_004955450 15353511 15354490 + 102013571 AGCD01042789;GBCQ01060641;XR_262557 MODEL 8993252 protein-coding LOC102005404 olfactory receptor 5L1-like NW_004955511 647139 648068 + 102005404 AGCD01066337;XM_005408203 XP_005408260 MODEL 10108218 ncrna LOC106150160 uncharacterized LOC106150160 NW_004955466 704973 710166 + 106150160 AGCD01050673;XR_001236807 MODEL 8870085 protein-coding Fmc1 formation of mitochondrial complex V assembly factor 1 INVOLVED IN apoptotic mitochondrial changes (ortholog); dopaminergic neuron differentiation (ortholog); mitochondrial proton-transporting ATP synthase complex assembly (ortholog); ASSOCIATED WITH Parkinson's Disease, Mitochondrial (ortholog); secondary Parkinson disease (ortholog); FOUND IN mitochondrion (ortholog) NW_004955494 3722359 3730217 - 102028308 AGCD01061481;GBDJ01007860;XM_005405445;XM_013504962;XM_013504963;XM_013504965 XP_005405502;XP_013360416;XP_013360417;XP_013360419 MODEL 39131325 protein-coding IMPG1 interphotoreceptor matrix proteoglycan 1 9036153 protein-coding Brms1 BRMS1 transcriptional repressor and anoikis regulator ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of anoikis (ortholog); regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955422 18981984 18989730 + 102014370 AGCD01022970;GBDJ01187942;XM_005384413;XM_005384415;XM_005384417;XM_013514159 XP_005384470;XP_005384472;XP_005384474;XP_013369613 MODEL 8722393 ncrna LOC102003630 uncharacterized LOC102003630 NW_004955461 9207794 9213408 + 102003630 AGCD01048943;GBDF01222087;XR_001236550;XR_001236551;XR_001236552 MODEL 9001065 pseudo LOC102018940 SNW domain-containing protein 1 pseudogene NW_004955423 812801 813554 + 102018940 AGCD01023421 MODEL 8935556 protein-coding LOC102003957 asialoglycoprotein receptor 2 NW_004955467 9753634 9773834 + 102003957 AGCD01051524;GBDJ01193720;XM_005399561;XM_005399562;XM_005399563;XM_005399564;XM_005399565;XM_005399566;XM_005399567;XM_013522259;XM_013522260;XM_013522261;XM_013522262;XM_013522263;XM_013522264;XM_013522265 XP_005399618;XP_005399619;XP_005399620;XP_005399621;XP_005399622;XP_005399623;XP_005399624;XP_013377713;XP_013377714;XP_013377715;XP_013377716;XP_013377717;XP_013377718;XP_013377719 MODEL 8773420 pseudo LOC102006876 heterogeneous nuclear ribonucleoprotein D-like pseudogene NW_004955407 20847561 20859445 - 102006876 AGCD01007345 MODEL 8877003 protein-coding Smad6 SMAD family member 6 ENCODES a protein that exhibits chromatin binding (ortholog); co-SMAD binding (ortholog); I-SMAD binding (ortholog); INVOLVED IN aorta development (ortholog); aortic valve morphogenesis (ortholog); BMP signaling pathway (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH aortic disease (ortholog); aortic valve disease 1 (ortholog); aortic valve disease 2 (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) NW_004955450 9005332 9070790 - 102005761 AGCD01042582;AGCD01042583;AGCD01042584;GBBH01208531;GBCE01045102;XM_013519026 XP_013374480 MODEL 8841957 protein-coding Rabif RAB interacting factor ENCODES a protein that exhibits zinc ion binding (ortholog); ASSOCIATED WITH esophageal cancer (ortholog); lung cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955406 38883050 38893012 - 102030497 AGCD01006612;GBDF01085052;XM_005375231 XP_005375288 MODEL 8798789 ncrna LOC102019352 uncharacterized LOC102019352 NW_004955405 18424487 18429122 - 102019352 AGCD01005017;GBDJ01223618;XR_259387 MODEL 39132547 snrna U6 U6 spliceosomal RNA 9060298 protein-coding Syt14 synaptotagmin 14 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); identical protein binding (ortholog); phospholipid binding (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 11 (ortholog); esophageal cancer (ortholog); lung cancer (ortholog) NW_004955489 2017884 2275834 - 102019704 AGCD01059856;AGCD01059857;AGCD01059858;AGCD01059859;AGCD01059860;AGCD01059861;AGCD01059862;GBDF01276744;GBDF01276752;XM_013504506 XP_013359960 MODEL 8777383 protein-coding Gfra3 GDNF family receptor alpha 3 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); glial cell-derived neurotrophic factor receptor activity (ortholog); INVOLVED IN axon guidance (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); neuron development (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); lung cancer (ortholog); prostate cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) NW_004955418 2152887 2162883 + 102003341 AGCD01018746;AGCD01018747;GBBH01050450;GBDF01052356;XM_013512867 XP_013368321 MODEL 8878951 protein-coding Abhd3 abhydrolase domain containing 3, phospholipase ENCODES a protein that exhibits A2-type glycerophospholipase activity (ortholog); glycerophospholipid phospholipase A1 activity (ortholog); INVOLVED IN phosphatidylcholine metabolic process (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); esophageal cancer (ortholog); hepatocellular carcinoma (ortholog) NW_004955402 10316881 10355760 - 102018874 AGCD01000262;AGCD01000263;GBBH01092371;GBCE01099406;XM_013520539 XP_013375993 MODEL 8700530 protein-coding Tp53i13 tumor protein p53 inducible protein 13 INVOLVED IN negative regulation of cell cycle (ortholog); response to UV (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); nonpapillary renal cell carcinoma (ortholog); sarcoma (ortholog); FOUND IN cytoplasm (ortholog) NW_004955481 3681495 3685051 - 102010584 AGCD01056911;GBCE01029826;XM_005402678 XP_005402735 MODEL 8744026 protein-coding Lvrn laeverin ASSOCIATED WITH Breast Cancer, Familial (ortholog); chronic lymphocytic leukemia/small lymphocytic lymphoma (ortholog); Familial Pancreatic Carcinoma (ortholog) NW_004955408 35761737 35823550 + 102006424 AGCD01008961;AGCD01008962;AGCD01008963;GBBH01015876;GBCE01023773;XM_013506949 XP_013362403 MODEL 8709936 protein-coding Ube2d2 ubiquitin conjugating enzyme E2 D2 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); protein K48-linked ubiquitination (ortholog); protein polyubiquitination (ortholog); PARTICIPATES IN ubiquitin/proteasome degradation pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); cervical cancer (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog) NW_004955418 990124 1043544 - 102014898 AGCD01018699;AGCD01018700;AGCD01018701;AGCD01018702;AGCD01018703;GBDI01019168;XM_005382059;XM_005382060;XM_013512968;XM_013512969;XM_013512970 XP_005382116;XP_005382117;XP_013368422;XP_013368423;XP_013368424 MODEL 8741632 protein-coding Mcat malonyl-CoA-acyl carrier protein transacylase ENCODES a protein that exhibits [acyl-carrier-protein] S-malonyltransferase activity (ortholog); RNA folding chaperone (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); mitochondrial small ribosomal subunit assembly (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); lung cancer (ortholog); Optic Atrophy 15 (ortholog); FOUND IN mitochondrion (ortholog) NW_004955413 28296507 28301669 - 102015710 AGCD01014555;GBCQ01095608;XM_005379434;XM_005379435;XM_013511610 XP_005379491;XP_005379492;XP_013367064 MODEL 8699912 protein-coding Fads2 fatty acid desaturase 2 ENCODES a protein that exhibits acyl-CoA 6-desaturase activity (ortholog); acyl-CoA desaturase activity (ortholog); stearoyl-CoA 9-desaturase activity (ortholog); INVOLVED IN arachidonate metabolite production involved in inflammatory response (ortholog); fatty acid biosynthetic process (ortholog); positive regulation of cellular response to oxidative stress (ortholog); PARTICIPATES IN alpha-linolenic acid metabolic pathway; linoleic acid metabolic pathway; ASSOCIATED WITH bipolar disorder (ortholog); Cardiac Fibrosis (ortholog); Cardiomegaly (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955511 5827797 5842745 - 102020363 AGCD01066587;GBDJ01003271;XM_013506432 XP_013361886 MODEL 39132119 snrna U6 U6 spliceosomal RNA 8879528 protein-coding Themis2 thymocyte selection associated family member 2 INVOLVED IN regulation of B cell activation (ortholog); T cell receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) NW_004955452 7058703 7075114 + 102010662 AGCD01044131;GBDK01197221;XM_005394933;XM_013519612;XM_013519613;XM_013519614 XP_005394990;XP_013375066;XP_013375067;XP_013375068 MODEL 8796263 protein-coding Sc5d sterol-C5-desaturase ENCODES a protein that exhibits C-5 sterol desaturase activity (ortholog); delta7-sterol 5(6)-desaturase activity (ortholog); sterol desaturase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); negative regulation of ferroptosis (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH cholestasis (ortholog); esophageal cancer (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) NW_004955412 22274131 22288870 + 102014758 AGCD01013044;GBDK01146982;XM_005378360;XM_005378361;XM_005378362;XM_005378363 XP_005378417;XP_005378418;XP_005378419;XP_005378420 MODEL 8795007 protein-coding LOC102023280 V-set domain-containing T-cell activation inhibitor 1-like NW_004955427 19924101 19932272 + 102023280 AGCD01027389;GBCB01114282;XM_013515167 XP_013370621 MODEL 8921573 protein-coding Ebf2 EBF transcription factor 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); brown fat cell differentiation (ortholog); cell fate determination (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); esophageal cancer (ortholog); head and neck squamous cell carcinoma (ortholog) NW_004955403 48674218 48859843 - 102025425 AGCD01002926;AGCD01002927;AGCD01002928;AGCD01002929;GBDI01106348;XM_005373722 XP_005373779 MODEL 10094502 ncrna LOC106149611 uncharacterized LOC106149611 NW_004955450 6141056 6155982 - 106149611 AGCD01042520;GBDF01289196;XR_001235916 MODEL 8997774 protein-coding Tbc1d17 TBC1 domain family member 17 INVOLVED IN regulation of cilium assembly (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); lung cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); recycling endosome (ortholog) NW_004955559 1047389 1055891 - 102028138 AGCD01073626;AGCD01073627;GBBH01033249;GBDI01128720;XM_013508953 XP_013364407 MODEL 8867514 pseudo LOC102020798 protein tyrosine phosphatase type IVA 1 pseudogene NW_004955415 12226682 12227264 - 102020798 AGCD01016186 MODEL 8844704 protein-coding Slc26a4 solute carrier family 26 member 4 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); chloride:bicarbonate antiporter activity (ortholog); iodide transmembrane transporter activity (ortholog); INVOLVED IN inorganic anion transport (ortholog); iodide transport (ortholog); positive regulation of anion transmembrane transport (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH Acidoses (ortholog); anxiety disorder (ortholog); autosomal recessive nonsyndromic deafness (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); extracellular exosome (ortholog) NW_004955410 12008067 12057147 + 102006433 AGCD01010841;AGCD01010842;AGCD01010843;GBCE01014855;XM_005377285;XM_005377286 XP_005377342;XP_005377343 MODEL 8857460 protein-coding LOC102004703 leucine-rich repeat-containing protein 48 NW_004955478 11265115 11298661 - 102004703 AGCD01056165;AGCD01056166;GBBH01117002;GBDJ01386727;XM_013503219 XP_013358673 MODEL 8809276 protein-coding Ylpm1 YLP motif containing 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of telomere maintenance (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) NW_004955523 721447 784097 - 102016741 AGCD01068476;AGCD01068477;GBDF01121095;GBDK01234656;XM_013507171 XP_013362625 MODEL 9016780 protein-coding Kirrel2 kirre like nephrin family adhesion molecule 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cervical cancer (ortholog); epilepsy (ortholog); FOUND IN cell-cell junction (ortholog); centriolar satellite (ortholog); plasma membrane (ortholog) NW_004955468 2705131 2712921 - 102016578 AGCD01051834;GBDJ01243401;XM_013522336 XP_013377790 MODEL 8851175 protein-coding Gfra4 GDNF family receptor alpha 4 ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); INVOLVED IN glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); negative regulation of ossification (ortholog); ASSOCIATED WITH fetal akinesia deformation sequence syndrome 1 (ortholog); uterine corpus endometrial carcinoma (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) NW_004955415 14513183 14514140 - 102027968 AGCD01016299;GBDI01221583;GBDJ01047888;XM_013512301 XP_013367755 MODEL 8738223 protein-coding Gna14 G protein subunit alpha 14 INVOLVED IN cell chemotaxis (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of inflammatory response (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; eicosanoid signaling pathway; endothelin signaling pathway; ASSOCIATED WITH Breast Cancer, Familial (ortholog); CEREBROFACIAL ARTERIOVENOUS METAMERIC SYNDROME (ortholog); Experimental Liver Cirrhosis (ortholog) NW_004955512 1703750 1918321 + 102026138 AGCD01066649;AGCD01066650;AGCD01066651;AGCD01066652;AGCD01066653;GBBH01164261;XM_005408300 XP_005408357 MODEL 8763079 protein-coding Tef TEF transcription factor, PAR bZIP family member ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); colorectal cancer (ortholog); ovarian serous cystadenocarcinoma (ortholog) NW_004955413 26956285 26978734 + 102017559 AGCD01014489;GBBH01002122;XM_005379346;XM_005379347 XP_005379403;XP_005379404 MODEL 8780167 ncrna LOC102018125 uncharacterized LOC102018125 NW_004955523 895086 911354 - 102018125 AGCD01068485;GBCE01011399;XR_264635 MODEL 39132697 snrna U6 U6 spliceosomal RNA 8988118 protein-coding Hhla1 HHLA1 neighbor of OC90 ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); sarcoma (ortholog) NW_004955461 6738022 6774493 - 102003002 AGCD01048911;XM_005398071 XP_005398128 MODEL 8781027 protein-coding Map2k6 mitogen-activated protein kinase kinase 6 ENCODES a protein that exhibits identical protein binding (ortholog); MAP kinase kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN bone development (ortholog); cardiac muscle contraction (ortholog); cellular response to sorbitol (ortholog); PARTICIPATES IN adenosine signaling pathway; cardiomyopathy pathway; FasL mediated signaling pathway; ASSOCIATED WITH allergic disease (ortholog); Animal Mammary Neoplasms (ortholog); Brain Death (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) NW_004955478 3331607 3448840 - 102022814 AGCD01055819;AGCD01055820;AGCD01055821;AGCD01055822;AGCD01055823;AGCD01055824;GBDJ01336849;XM_005402104;XM_013503244 XP_005402161;XP_013358698 MODEL 8928113 pseudo LOC102020399 U6 snRNA-associated Sm-like protein LSm5 pseudogene NW_004955450 3686193 3686602 + 102020399 AGCD01042440;XM_005393581 MODEL 8866197 protein-coding Hadh hydroxyacyl-CoA dehydrogenase ENCODES a protein that exhibits (3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); NAD+ binding (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); negative regulation of insulin secretion (ortholog); positive regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; butanoate metabolic pathway; ASSOCIATED WITH 3-Hydroxyacyl-CoA Dehydrogenase Deficiency (ortholog); colon adenocarcinoma (ortholog); Congenital Hyperinsulinism (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) NW_004955496 1835034 1861410 - 102004086 AGCD01062260;GBBH01065701;XM_005406205;XM_013505392 XP_005406262;XP_013360846 MODEL 8942737 protein-coding Fmn1 formin 1 ENCODES a protein that exhibits microtubule binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); forelimb morphogenesis (ortholog); gene expression (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) NW_004955416 1365797 1774025 + 102026105 AGCD01016834;AGCD01016835;AGCD01016836;AGCD01016837;AGCD01016838;AGCD01016839;AGCD01016840;GBDF01084814;XM_005381169;XM_005381170;XM_005381171;XM_005381172;XM_005381173;XM_013512614 XP_005381226;XP_005381227;XP_005381228;XP_005381229;XP_005381230;XP_013368068 MODEL 8732000 pseudo LOC102003632 60S ribosomal protein L35a pseudogene NW_004955462 10954407 10954736 - 102003632 AGCD01049379;XM_005398243 MODEL 39134433 misc_rna 7SK 7SK RNA 8703970 protein-coding Sdf2l1 stromal cell derived factor 2 like 1 ENCODES a protein that exhibits ATPase binding (ortholog); misfolded protein binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN cellular response to misfolded protein (ortholog); ERAD pathway (ortholog); protein refolding (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH Crohn's disease (ortholog); Prostatic Neoplasms (ortholog); Spontaneous Abortions (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog); membrane (ortholog) NW_004955442 17468302 17470296 - 102015353 AGCD01037955;GBCB01077176;XM_005391702 XP_005391759 MODEL 8872178 pseudo LOC102012748 mothers against decapentaplegic homolog 5 pseudogene NW_004955412 6157467 6159343 + 102012748 AGCD01012666 MODEL 8846616 protein-coding Ldha lactate dehydrogenase A ENCODES a protein that exhibits identical protein binding (ortholog); kinase binding (ortholog); L-lactate deh