# RGD-PIPELINE: ftp-file-extracts
# MODULE: annotations-version-1.1.9 (Oct 10, 2019)
# GENERATED-ON: 2024/04/27
# PURPOSE: annotations about active Dog objects extracted from RGD database
# ONTOLOGY: MP: Mammalian Phenotype
# CONTACT: rgd.data@mcw.edu
# FORMAT: tab delimited text
# NOTES: multiple values in a single column are separated by '|'
#
#COLUMN INFORMATION:
#
#1   RGD_ID	          unique RGD_ID of the annotated object
#2   OBJECT_SYMBOL      official symbol of the annotated object
#3   OBJECT_NAME        official name of the annotated object
#4   OBJECT_TYPE        annotated object data type: one of ['gene','qtl','strain']
#5   TERM_ACC_ID        ontology term accession id
#6   TERM_NAME          ontology term name
#7   QUALIFIER          optional qualifier
#8   EVIDENCE           evidence
#9   WITH               with info
#10  ASPECT             aspect
#11  REFERENCES         db references (Reference RGDID|PUBMED ID)
#12  CREATED_DATE       created date
#13  ASSIGNED_BY        assigned by
#14  MESH_OMIM_ID       MESH:xxx or OMIM:xxx id corresponding to RDO:xxx id found in TERM_ACC_ID column (RGD/CTD Disease Ontology annotations only)
#15  CURATION_NOTES     curation notes provided by RGD curators
#16  ORIGINAL_REFERENCE original reference
RGD_ID	OBJECT_SYMBOL	OBJECT_NAME	OBJECT_TYPE	TERM_ACC_ID	TERM_NAME	QUALIFIER	EVIDENCE	WITH	ASPECT	REFERENCES	CREATED_DATE	ASSIGNED_BY	MESH_OMIM_ID	CURATION_NOTES	ORIGINAL_REFERENCE
12090012	KIT	KIT proto-oncogene, receptor tyrosine kinase	gene	MP:0002938	white spotting		IAGP		N	RGD:12801476	20210603	OMIA		Coat colour, white spotting, KIT-related	PMID:23134432|PMID:23659249
12153264	KRT71	keratin 71	gene	MP:0000410	waved hair		IAGP		N	RGD:12801476	20230823	OMIA		Curly coat	PMID:19713490|PMID:22971920|PMID:27994129|PMID:30444027|PMID:30456859|PMID:31658272|PMID:34196995|PMID:36427679|PMID:37582787
12175281	MC1R	melanocortin 1 receptor	gene	MP:0012017	grizzled coat color		IAGP		N	RGD:12801476	20230823	OMIA		Coat colour, grizzle	PMID:20525767|PMID:29932470|PMID:34751460|PMID:35595349|PMID:35510419|PMID:37582787
12233617	MSTN	myostatin	gene	MP:0009461	skeletal muscle hypertrophy		IAGP		N	RGD:12801476	20230517	OMIA		Muscular hypertrophy (double muscling)	PMID:17530926|PMID:17651971|PMID:21175702|PMID:30125951|PMID:33854530|PMID:26459633|PMID:17884234
12262328	RSPO2	R-spondin 2	gene	MP:0000418	focal hair loss		IAGP		N	RGD:12801476	20210603	OMIA		Improper coat	PMID:20562213|PMID:27994129
12293696	MITF	melanocyte inducing transcription factor	gene	MP:0002938	white spotting		IAGP		N	RGD:12801476	20230118	OMIA		Coat colour, white spotting	PMID:2323567|PMID:15475400|PMID:17906626|PMID:11178229|PMID:18704695|PMID:17121617|PMID:17548862|PMID:20224736|PMID:25116146|PMID:31658272|PMID:33539602|PMID:33672409|PMID:34165209|PMID:34751460|PMID:35510420|PMID:31027231|PMID:35510419
12317503	FGF5	fibroblast growth factor 5	gene	MP:0002881	long hair		IAGP		N	RGD:12801476	20231004	OMIA		Hair, long	PMID:731015|PMID:18505865|PMID:19713490|PMID:16879338|PMID:15812847|PMID:23384345|PMID:27994129|PMID:31658272|PMID:33863806|PMID:37582787|PMID:37778752
12372074	TBXT	T-box transcription factor T	gene	MP:0000592	short tail		IAGP		N	RGD:12801476	20230823	OMIA		Tail, short	PMID:11252170|PMID:18505865|PMID:18854372|PMID:17850278|PMID:31658272|PMID:36848350|PMID:37277858|PMID:37582787